request from: hawk checking if we should skip the build started at: Mon Apr 9 11:41:06 2018 fetching http://kraz.tld-linux.org/~buildertidev//srpms/1cde3bda-eb07-43f0-9cec-d20748fd6a1c/R-3.4.3-1.src.rpm fetched 30266353 bytes, 4051.2 K/s installing srpm: R-3.4.3-1.src.rpm mesg: ttyname failed: Inappropriate ioctl for device + install -d /tmp/B.Qb_jAP/BUILD /tmp/B.Qb_jAP/RPMS + LC_ALL=en_US.UTF-8 + rpm -qp --changelog R-3.4.3-1.src.rpm * Mon Apr 09 2018 TLD Linux - For complete changelog see: http://git.tld-linux.org/?p=packages/R.git;a=log;h=967c8b56861b1c62e568ff4dc9e3dda786e6083a * Fri Mar 16 2018 Jakub Bogusz 967c8b5 - updated to 3.4.3 * Sat May 27 2017 Jakub Bogusz 6355f66 - updated to 3.4.0 * Thu May 25 2017 Jan RÄ™korajski 1cc13d3 - rebuild with lapack 3.7 - release 6 (by relup.sh) * Sun Apr 23 2017 Jan RÄ™korajski 592ade8 - release 5 (by relup.sh) + rpm -Uhv --nodeps --define '_topdir /tmp/B.Qb_jAP' --define '_specdir %{_topdir}' --define '_sourcedir %{_specdir}' --define '_rpmdir %{_topdir}/RPMS' --define '_builddir %{_topdir}/BUILD' --without tests R-3.4.3-1.src.rpm R ################################################## + rm -f R-3.4.3-1.src.rpm mesg: ttyname failed: Inappropriate ioctl for device + install -m 700 -d /tmp/B.Qb_jAP/BUILD/tmp mesg: ttyname failed: Inappropriate ioctl for device + TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp + exec nice -n 19 rpmbuild -bp --short-circuit --nodeps --define '_topdir /tmp/B.Qb_jAP' --define '_specdir %{_topdir}' --define '_sourcedir %{_specdir}' --define '_rpmdir %{_topdir}/RPMS' --define '_builddir %{_topdir}/BUILD' --without tests --target x86_64-tld-linux --define 'prep exit 0' /tmp/B.Qb_jAP/R.spec Building target platforms: x86_64-tld-linux checking BuildConflict-ing packages no BuildConflicts found checking BR rpm: Building target platforms: x86_64-tld-linux no BR needed building RPM using: set -ex; : build-id: 1cde3bda-eb07-43f0-9cec-d20748fd6a1c; TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp exec nice -n 19 rpmbuild -bb --define '_smp_mflags -j8' --define '_tld_builder 1' --define '_topdir /tmp/B.Qb_jAP' --define '_specdir %{_topdir}' --define '_sourcedir %{_specdir}' --define '_rpmdir %{_topdir}/RPMS' --define '_builddir %{_topdir}/BUILD' --without tests --target x86_64-tld-linux /tmp/B.Qb_jAP/R.spec mesg: ttyname failed: Inappropriate ioctl for device + : build-id: 1cde3bda-eb07-43f0-9cec-d20748fd6a1c + TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp + exec nice -n 19 rpmbuild -bb --define '_smp_mflags -j8' --define '_tld_builder 1' --define '_topdir /tmp/B.Qb_jAP' --define '_specdir %{_topdir}' --define '_sourcedir %{_specdir}' --define '_rpmdir %{_topdir}/RPMS' --define '_builddir %{_topdir}/BUILD' --without tests --target x86_64-tld-linux /tmp/B.Qb_jAP/R.spec Building target platforms: x86_64-tld-linux Executing(%prep): env -i TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp /bin/sh -e /tmp/B.Qb_jAP/BUILD/tmp/rpm-tmp.53288 + umask 022 + cd /tmp/B.Qb_jAP/BUILD + cd /tmp/B.Qb_jAP/BUILD + rm -rf R-3.4.3 + /usr/bin/gzip -dc /tmp/B.Qb_jAP/R-3.4.3.tar.gz + /bin/tar -xf - + STATUS=0 + '[' 0 -ne 0 ']' + cd R-3.4.3 + /bin/id -u + '[' 10001 '=' 0 ']' + true . + /bin/chmod -Rf -Rf a+rX,u+w,g-w,o-w . + exit 0 Executing(%build): env -i TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp /bin/sh -e /tmp/B.Qb_jAP/BUILD/tmp/rpm-tmp.67520 TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp + umask 022 + cd /tmp/B.Qb_jAP/BUILD + cd R-3.4.3 + aclocal -I m4 + autoconf + install -d build + cd build + .././configure 'LDFLAGS=-Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc ' 'CFLAGS=-O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 ' 'CXXFLAGS=-O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 ' 'FFLAGS=-O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 ' 'FCFLAGS=-O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 ' 'CPPFLAGS=' 'CC=x86_64-tld-linux-gcc' 'CXX=x86_64-tld-linux-g++' '--host=x86_64-tld-linux' '--build=x86_64-tld-linux' '--prefix=/usr' '--exec-prefix=/usr' '--bindir=/usr/bin' '--sbindir=/usr/sbin' '--sysconfdir=/etc' '--datadir=/usr/share' '--includedir=/usr/include' '--libdir=/usr/lib64' '--libexecdir=/usr/lib64' '--localstatedir=/var' '--sharedstatedir=/var/lib' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--x-libraries=/usr/lib64' 'F77=gfortran' 'FC=gfortran' --enable-R-shlib --enable-largefile --with-internal-tzcode --with-ICU --with-blas --with-cairo --with-jpeglib --with-lapack --with-libpng --with-readline --with-recommended-packages --with-system-tre --with-tcltk '--with-tcl-config=/usr/lib/tclConfig.sh' '--with-tk-config=/usr/lib/tkConfig.sh' --with-x checking build system type... x86_64-tld-linux-gnu checking host system type... x86_64-tld-linux-gnu loading site script '.././config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... no checking for working aclocal... found checking for working autoconf... found checking for working automake... found checking for working autoheader... found checking whether ln -s works... yes checking for bison... bison -y checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c checking for sed... /bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... /usr/bin/gtar checking for tex... /usr/bin/tex checking for pdftex... /usr/bin/pdftex checking for pdflatex... /usr/bin/pdflatex checking for makeindex... no checking for texi2any... /usr/bin/texi2any checking whether texi2any version is at least 5.1... yes checking for ginstall-info... no checking for install-info... no checking for texi2dvi... /usr/bin/texi2dvi checking for kpsewhich... /usr/bin/kpsewhich checking for latex inconsolata package... missing configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally checking for unzip... /usr/bin/unzip checking for zip... /usr/bin/zip checking for gzip... /usr/bin/gzip checking for bzip2... /usr/bin/bzip2 checking for firefox... no checking for mozilla... no checking for galeon... no checking for opera... no checking for xdg-open... no checking for kfmclient... no checking for gnome-moz-remote... no checking for open... /usr/bin/open using default browser ... /usr/bin/open checking for acroread... no checking for acroread4... no checking for xdg-open... no checking for evince... no checking for xpdf... no checking for gv... no checking for gnome-gv... no checking for ggv... no checking for okular... no checking for kpdf... no checking for open... /usr/bin/open checking for notangle... false checking for realpath... /usr/bin/realpath checking for pkg-config... /usr/bin/pkg-config checking for x86_64-tld-linux-gcc... x86_64-tld-linux-gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether x86_64-tld-linux-gcc accepts -g... yes checking for x86_64-tld-linux-gcc option to accept ISO C89... none needed checking how to run the C preprocessor... x86_64-tld-linux-gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking whether x86_64-tld-linux-gcc needs -traditional... no checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking how to run the C preprocessor... x86_64-tld-linux-gcc -E defining F77 to be gfortran checking for x86_64-tld-linux-g77... gfortran checking whether we are using the GNU Fortran 77 compiler... yes checking whether gfortran accepts -g... yes checking whether we are using the GNU C++ compiler... yes checking whether x86_64-tld-linux-g++ accepts -g... yes checking whether x86_64-tld-linux-g++ -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 can compile C++ code... yes checking how to run the C++ preprocessor... x86_64-tld-linux-g++ -E checking whether __attribute__((visibility())) is supported... yes checking whether x86_64-tld-linux-gcc accepts -fvisibility... yes checking whether gfortran accepts -fvisibility... yes checking for x86_64-tld-linux-gcc... x86_64-tld-linux-gcc checking whether we are using the GNU Objective C compiler... yes checking whether x86_64-tld-linux-gcc accepts -g... yes checking for Objective C++ compiler... trying some possibilities checking whether x86_64-tld-linux-g++ can compile ObjC++... no no working ObjC++ compiler found checking how to print strings... print -r checking for a sed that does not truncate output... (cached) /bin/sed checking for fgrep... /bin/grep -F checking for ld used by x86_64-tld-linux-gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-tld-linux-gnu file names to x86_64-tld-linux-gnu format... func_convert_file_noop checking how to convert x86_64-tld-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for x86_64-tld-linux-objdump... no checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for x86_64-tld-linux-dlltool... no checking for dlltool... no checking how to associate runtime and link libraries... print -r -- checking for x86_64-tld-linux-ar... (cached) ar checking for archiver @FILE support... @ checking for x86_64-tld-linux-strip... no checking for strip... strip checking for x86_64-tld-linux-ranlib... no checking for ranlib... ranlib checking for mawk... mawk checking command to parse /usr/bin/nm -B output from x86_64-tld-linux-gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for x86_64-tld-linux-mt... no checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if x86_64-tld-linux-gcc supports -fno-rtti -fno-exceptions... no checking for x86_64-tld-linux-gcc option to produce PIC... -fPIC -DPIC checking if x86_64-tld-linux-gcc PIC flag -fPIC -DPIC works... yes checking if x86_64-tld-linux-gcc static flag -static works... yes checking if x86_64-tld-linux-gcc supports -c -o file.o... yes checking if x86_64-tld-linux-gcc supports -c -o file.o... (cached) yes checking whether the x86_64-tld-linux-gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking how to run the C++ preprocessor... x86_64-tld-linux-g++ -E checking for ld used by x86_64-tld-linux-g++... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the x86_64-tld-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for x86_64-tld-linux-g++ option to produce PIC... -fPIC -DPIC checking if x86_64-tld-linux-g++ PIC flag -fPIC -DPIC works... yes checking if x86_64-tld-linux-g++ static flag -static works... yes checking if x86_64-tld-linux-g++ supports -c -o file.o... yes checking if x86_64-tld-linux-g++ supports -c -o file.o... (cached) yes checking whether the x86_64-tld-linux-g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for gfortran option to produce PIC... -fPIC checking if gfortran PIC flag -fPIC works... yes checking if gfortran static flag -static works... no checking if gfortran supports -c -o file.o... yes checking if gfortran supports -c -o file.o... (cached) yes checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for cos in -lm... yes checking for sin in -lm... yes checking for dlopen in -ldl... yes checking readline/history.h usability... yes checking readline/history.h presence... yes checking for readline/history.h... yes checking readline/readline.h usability... yes checking readline/readline.h presence... yes checking for readline/readline.h... yes checking for rl_callback_read_char in -lreadline... yes checking for history_truncate_file... yes checking whether rl_callback_sigcleanup exists and is declared... yes checking whether rl_completion_matches exists and is declared... yes checking whether rl_resize_terminal exists and is declared... yes checking whether rl_sort_completion_matches exists and is declared... yes checking for ANSI C header files... (cached) yes checking for dirent.h that defines DIR... yes checking for library containing opendir... none required checking for sys/wait.h that is POSIX.1 compatible... yes checking for dlfcn.h... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking glob.h usability... yes checking glob.h presence... yes checking for glob.h... yes checking grp.h usability... yes checking grp.h presence... yes checking for grp.h... yes checking pwd.h usability... yes checking pwd.h presence... yes checking for pwd.h... yes checking sched.h usability... yes checking sched.h presence... yes checking for sched.h... yes checking for strings.h... (cached) yes checking sys/resource.h usability... yes checking sys/resource.h presence... yes checking for sys/resource.h... yes checking sys/select.h usability... yes checking sys/select.h presence... yes checking for sys/select.h... yes checking sys/socket.h usability... yes checking sys/socket.h presence... yes checking for sys/socket.h... yes checking for sys/stat.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking sys/times.h usability... yes checking sys/times.h presence... yes checking for sys/times.h... yes checking sys/utsname.h usability... yes checking sys/utsname.h presence... yes checking for sys/utsname.h... yes checking for unistd.h... (cached) yes checking utime.h usability... yes checking utime.h presence... yes checking for utime.h... yes checking arpa/inet.h usability... yes checking arpa/inet.h presence... yes checking for arpa/inet.h... yes checking dl.h usability... no checking dl.h presence... no checking for dl.h... no checking elf.h usability... yes checking elf.h presence... yes checking for elf.h... yes checking features.h usability... yes checking features.h presence... yes checking for features.h... yes checking floatingpoint.h usability... no checking floatingpoint.h presence... no checking for floatingpoint.h... no checking langinfo.h usability... yes checking langinfo.h presence... yes checking for langinfo.h... yes checking netdb.h usability... yes checking netdb.h presence... yes checking for netdb.h... yes checking netinet/in.h usability... yes checking netinet/in.h presence... yes checking for netinet/in.h... yes checking sys/param.h usability... yes checking sys/param.h presence... yes checking for sys/param.h... yes checking stdalign.h usability... yes checking stdalign.h presence... yes checking for stdalign.h... yes checking errno.h usability... yes checking errno.h presence... yes checking for errno.h... yes checking for inttypes.h... (cached) yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking locale.h usability... yes checking locale.h presence... yes checking for locale.h... yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking stdbool.h usability... yes checking stdbool.h presence... yes checking for stdbool.h... yes checking for stdint.h... (cached) yes checking for string.h... (cached) yes checking whether setjmp.h is POSIX.1 compatible... yes checking whether sigsetjmp is declared... yes checking whether siglongjmp is declared... yes checking for GNU C library with version >= 2... yes checking return type of signal handlers... void checking for uint64_t... yes checking for int64_t... yes checking for int_fast64_t... yes checking for pid_t... yes checking for size_t... yes checking whether SIZE_MAX is declared... yes checking for blkcnt_t... yes checking for type of socket length... socklen_t * checking for stack_t... yes checking for intptr_t... yes checking for uintptr_t... yes checking whether byte ordering is bigendian... no checking for an ANSI C-conforming const... yes checking for x86_64-tld-linux-gcc option to accept ISO C99... none needed checking for x86_64-tld-linux-gcc option to accept ISO Standard C... (cached) none needed checking for inline... inline checking size of int... 4 checking size of long... 8 checking size of long long... 8 checking size of double... 8 checking size of size_t... 8 checking size of long double... 16 checking whether we can compute C Make dependencies... yes, using $(CC) -MM checking whether x86_64-tld-linux-gcc supports -c -o FILE.lo... yes checking for x86_64-tld-linux-gcc option to support OpenMP... -fopenmp checking how to get verbose linking output from gfortran... -v checking for Fortran 77 libraries of gfortran... -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0 -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0/../../.. -lgfortran -lm -lquadmath checking how to get verbose linking output from x86_64-tld-linux-gcc... -v checking for C libraries of x86_64-tld-linux-gcc... -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0 -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -L/usr/lib64/gcc/x86_64-tld-linux/7.3.0/../../.. -lgcc_s checking for dummy main to link with Fortran 77 libraries... none checking for Fortran 77 name-mangling scheme... lower case, underscore, no extra underscore checking whether gfortran appends underscores to external names... yes checking whether gfortran appends extra underscores to external names... no checking whether mixed C/Fortran code can be run... yes checking whether gfortran and x86_64-tld-linux-gcc agree on int and double... yes checking whether gfortran and x86_64-tld-linux-gcc agree on double complex... yes checking for gfortran option to support OpenMP... -fopenmp checking whether x86_64-tld-linux-g++ accepts -M for generating dependencies... yes checking for x86_64-tld-linux-g++ option to support OpenMP... -fopenmp checking whether we can compute ObjC Make dependencies... yes, using x86_64-tld-linux-gcc -MM checking for ObjC runtime library... -lobjc checking for ObjC runtime style... unknown checking whether x86_64-tld-linux-gcc accepts -fobjc-exceptions... yes checking whether C runtime needs -D__NO_MATH_INLINES... no checking for xmkmf... /usr/bin/xmkmf checking whether x86_64-tld-linux-g++ supports C++98 features by default... no checking whether x86_64-tld-linux-g++ supports C++98 features with -std=gnu++98... yes checking whether x86_64-tld-linux-g++ supports C++11 features by default... no checking whether x86_64-tld-linux-g++ supports C++11 features with -std=gnu++11... yes checking whether x86_64-tld-linux-g++ supports C++14 features by default... yes checking whether x86_64-tld-linux-g++ supports C++17 features by default... no checking whether x86_64-tld-linux-g++ supports C++17 features with -std=gnu++17... yes checking for off_t... yes checking for working alloca.h... yes checking for alloca... yes checking whether alloca is declared... yes checking whether expm1 exists and is declared... yes checking whether hypot exists and is declared... yes checking whether log1p exists and is declared... yes checking whether log1pl exists and is declared... yes checking whether log2 exists and is declared... yes checking whether log10 exists and is declared... yes checking whether nearbyint exists and is declared... yes checking whether nearbyintl exists and is declared... yes checking whether powl exists and is declared... yes checking whether rint exists and is declared... yes checking whether rintl exists and is declared... yes checking whether va_copy exists and is declared... yes checking for isblank... yes checking sunmath.h usability... no checking sunmath.h presence... no checking for sunmath.h... no checking for cospi in -lsunmath... no checking for atanpi... no checking for atan2pi... no checking for cospi... no checking for exp10... yes checking for pown... no checking for sinpi... no checking for tanpi... no checking for __cospi... no checking for __sinpi... no checking for __tanpi... no checking for fseeko... yes checking for ftello... yes checking for matherr... no checking whether fcntl exists and is declared... yes checking whether getgrgid exists and is declared... yes checking whether getpwuid exists and is declared... yes checking whether kill exists and is declared... yes checking whether sigaction exists and is declared... yes checking whether sigaltstack exists and is declared... yes checking whether sigemptyset exists and is declared... yes checking whether fdopen exists and is declared... yes checking whether popen exists and is declared... yes checking whether getline exists and is declared... yes checking whether select exists and is declared... yes checking whether setenv exists and is declared... yes checking whether unsetenv exists and is declared... yes checking whether getrlimit exists and is declared... yes checking whether getrusage exists and is declared... yes checking whether getpriority exists and is declared... yes checking whether chmod exists and is declared... yes checking whether mkfifo exists and is declared... yes checking whether stat exists and is declared... yes checking whether umask exists and is declared... yes checking whether gettimeofday exists and is declared... yes checking whether utimes exists and is declared... yes checking whether times exists and is declared... yes checking whether gmtime_r exists and is declared... yes checking whether localtime_r exists and is declared... yes checking whether nl_langinfo exists and is declared... yes checking whether access exists and is declared... yes checking whether chdir exists and is declared... yes checking whether execv exists and is declared... yes checking whether ftruncate exists and is declared... yes checking whether getcwd exists and is declared... yes checking whether geteuid exists and is declared... yes checking whether getuid exists and is declared... yes checking whether link exists and is declared... yes checking whether readlink exists and is declared... yes checking whether symlink exists and is declared... yes checking whether sysconf exists and is declared... yes checking whether sched_setaffinity exists and is declared... yes checking whether sched_getaffinity exists and is declared... yes checking whether utime exists and is declared... yes checking whether utimensat exists and is declared... yes checking for clock_gettime in -lrt... yes checking whether clock_gettime exists and is declared... yes checking whether timespec_get exists and is declared... yes checking for putenv... yes checking whether putenv is declared... yes checking for vasprintf... yes checking whether vasprintf is declared... yes checking for mempcpy... yes checking for realpath... yes checking whether realpath is declared... yes checking whether glob exists and is declared... yes checking for dladdr... yes checking for dlsym... yes checking whether dladdr is declared... yes checking whether dlsym is declared... yes checking whether RTLD_DEFAULT is declared... yes checking whether RTLD_NEXT is declared... yes checking for isnan... yes checking whether isfinite is declared... yes checking whether isnan is declared... yes checking whether you have IEEE 754 floating-point arithmetic... yes checking whether putenv("FOO") can unset an environment variable... yes checking whether putenv("FOO=") can unset an environment variable... no checking for nl_langinfo and CODESET... yes checking for mkdtemp... yes checking for strdup... yes checking for strncasecmp... yes checking whether mkdtemp is declared... yes checking whether strdup is declared... yes checking whether strncasecmp is declared... yes checking for library containing connect... none required checking for library containing gethostbyname... none required checking for library containing xdr_string... none required checking for working calloc... yes checking for working isfinite... yes checking for working log1p... yes checking whether ftell works correctly on files opened for append... yes checking for working sigaction... yes checking complex.h usability... yes checking complex.h presence... yes checking for complex.h... yes checking for double complex... yes checking whether C99 double complex is supported... yes checking whether cabs exists and is declared... yes checking whether carg exists and is declared... yes checking whether cexp exists and is declared... yes checking whether clog exists and is declared... yes checking whether csqrt exists and is declared... yes checking whether cpow exists and is declared... yes checking whether ccos exists and is declared... yes checking whether csin exists and is declared... yes checking whether ctan exists and is declared... yes checking whether cacos exists and is declared... yes checking whether casin exists and is declared... yes checking whether catan exists and is declared... yes checking whether ccosh exists and is declared... yes checking whether csinh exists and is declared... yes checking whether ctanh exists and is declared... yes checking for working ctanh... yes checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes checking for dgemm_... no checking for ATL_xerbla in -latlas... no checking for dgemm_ in -lblas... yes checking for dgemm_ in -ldgemm... no checking for dgemm_ in -lblas... (cached) yes checking for dgemm_ in -lessl... no checking for dgemm_ in -lblas... 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(cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... yes checking for argz_stringify... yes checking for argz_next... yes checking for __fsetlocking... yes checking whether feof_unlocked is declared... yes checking whether fgets_unlocked is declared... yes checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... yes checking for bison... bison checking version of bison... 3.0.4, ok checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... yes checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... yes checking whether to use NLS... yes checking where the gettext function comes from... libc Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/f77_f2c config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands config.status: executing stamp-h commands R is now configured for x86_64-tld-linux-gnu Source directory: ../. Installation directory: /usr C compiler: x86_64-tld-linux-gcc -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 Fortran 77 compiler: gfortran -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 Default C++ compiler: x86_64-tld-linux-g++ -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 C++98 compiler: x86_64-tld-linux-g++ -std=gnu++98 -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 C++11 compiler: x86_64-tld-linux-g++ -std=gnu++11 -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 C++14 compiler: x86_64-tld-linux-g++ -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 C++17 compiler: x86_64-tld-linux-g++ -std=gnu++17 -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 Fortran 90/95 compiler: gfortran -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 Obj-C compiler: x86_64-tld-linux-gcc -g -O2 -fobjc-exceptions Interfaces supported: X11, tcltk External libraries: readline, BLAS(generic), LAPACK(generic), curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo, ICU Options enabled: shared R library, R profiling Capabilities skipped: Options not enabled: shared BLAS, memory profiling Recommended packages: yes configure: WARNING: neither inconsolata.sty nor zi4.sty found: PDF vignettes and package manuals will not be rendered optimally + /usr/bin/make -j8 -j1 make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' mkdir -p -- ../share/R mkdir -p -- ../share/dictionaries mkdir -p -- ../share/encodings mkdir -p -- ../share/java mkdir -p -- ../share/licenses mkdir -p -- ../share/make mkdir -p -- ../share/Rd mkdir -p -- ../share/Rd/macros mkdir -p -- ../share/sh mkdir -p -- ../share/texmf mkdir -p -- ../share/texmf/bibtex/bib mkdir -p -- ../share/texmf/bibtex/bst mkdir -p -- ../share/texmf/tex/latex make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' mkdir -p -- ../../bin make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' mkdir -p -- ../../include make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' mkdir -p -- ../../../include/R_ext make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' making regcomp.d from ../../../.././src/extra/tre/regcomp.c making regerror.d from ../../../.././src/extra/tre/regerror.c making regexec.d from ../../../.././src/extra/tre/regexec.c making tre-ast.d from ../../../.././src/extra/tre/tre-ast.c making tre-compile.d from ../../../.././src/extra/tre/tre-compile.c making tre-match-approx.d from ../../../.././src/extra/tre/tre-match-approx.c making tre-match-backtrack.d from ../../../.././src/extra/tre/tre-match-backtrack.c making tre-match-parallel.d from ../../../.././src/extra/tre/tre-match-parallel.c making tre-mem.d from ../../../.././src/extra/tre/tre-mem.c making tre-parse.d from ../../../.././src/extra/tre/tre-parse.c making tre-stack.d from ../../../.././src/extra/tre/tre-stack.c making xmalloc.d from ../../../.././src/extra/tre/xmalloc.c make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/regcomp.c -o regcomp.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/regerror.c -o regerror.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/regexec.c -o regexec.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-ast.c -o tre-ast.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-compile.c -o tre-compile.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-match-approx.c -o tre-match-approx.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-match-backtrack.c -o tre-match-backtrack.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-match-parallel.c -o tre-match-parallel.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-mem.c -o tre-mem.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-parse.c -o tre-parse.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/tre-stack.c -o tre-stack.o x86_64-tld-linux-gcc -I../../../.././src/extra/tre -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tre/xmalloc.c -o xmalloc.o ar -cr libtre.a regcomp.o regerror.o regexec.o tre-ast.o tre-compile.o tre-match-approx.o tre-match-backtrack.o tre-match-parallel.o tre-mem.o tre-parse.o tre-stack.o xmalloc.o ranlib libtre.a make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' making localtime.d from ../../../.././src/extra/tzone/localtime.c making strftime.d from ../../../.././src/extra/tzone/strftime.c make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -I../../../.././src/extra/tzone -I../../../.././src/main -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tzone/localtime.c -o localtime.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -I../../../.././src/extra/tzone -I../../../.././src/main -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/extra/tzone/strftime.c -o strftime.o ar -cr libtz.a localtime.o strftime.o make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' making integrate.d from ../../.././src/appl/integrate.c making interv.d from ../../.././src/appl/interv.c making maxcol.d from ../../.././src/appl/maxcol.c making optim.d from ../../.././src/appl/optim.c making pretty.d from ../../.././src/appl/pretty.c making uncmin.d from ../../.././src/appl/uncmin.c make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/integrate.c -o integrate.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/interv.c -o interv.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/maxcol.c -o maxcol.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/optim.c -o optim.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/pretty.c -o pretty.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/uncmin.c -o uncmin.o gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dchdc.f -o dchdc.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dpbfa.f -o dpbfa.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dpbsl.f -o dpbsl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dpoco.f -o dpoco.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dpodi.f -o dpodi.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dpofa.f -o dpofa.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dposl.f -o dposl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dqrdc.f -o dqrdc.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dqrdc2.f -o dqrdc2.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dqrls.f -o dqrls.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dqrsl.f -o dqrsl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dqrutl.f -o dqrutl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dsvdc.f -o dsvdc.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dtrco.f -o dtrco.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/appl/dtrsl.f -o dtrsl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran ar -cr libappl.a integrate.o interv.o maxcol.o optim.o pretty.o uncmin.o dchdc.o dpbfa.o dpbsl.o dpoco.o dpodi.o dpofa.o dposl.o dqrdc.o dqrdc2.o dqrls.o dqrsl.o dqrutl.o dsvdc.o dtrco.o dtrsl.o ranlib libappl.a make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' making mlutils.d from ../../.././src/nmath/mlutils.c making d1mach.d from ../../.././src/nmath/d1mach.c making i1mach.d from ../../.././src/nmath/i1mach.c making fmax2.d from ../../.././src/nmath/fmax2.c making fmin2.d from ../../.././src/nmath/fmin2.c making fprec.d from ../../.././src/nmath/fprec.c making fround.d from ../../.././src/nmath/fround.c making ftrunc.d from ../../.././src/nmath/ftrunc.c making sign.d from ../../.././src/nmath/sign.c making fsign.d from ../../.././src/nmath/fsign.c making imax2.d from ../../.././src/nmath/imax2.c making imin2.d from ../../.././src/nmath/imin2.c making chebyshev.d from ../../.././src/nmath/chebyshev.c making log1p.d from ../../.././src/nmath/log1p.c making expm1.d from ../../.././src/nmath/expm1.c making lgammacor.d from ../../.././src/nmath/lgammacor.c making gammalims.d from ../../.././src/nmath/gammalims.c making stirlerr.d from ../../.././src/nmath/stirlerr.c making bd0.d from ../../.././src/nmath/bd0.c making gamma.d from ../../.././src/nmath/gamma.c making lgamma.d from ../../.././src/nmath/lgamma.c making gamma_cody.d from ../../.././src/nmath/gamma_cody.c making beta.d from ../../.././src/nmath/beta.c making lbeta.d from ../../.././src/nmath/lbeta.c making polygamma.d from ../../.././src/nmath/polygamma.c making cospi.d from ../../.././src/nmath/cospi.c making bessel_i.d from ../../.././src/nmath/bessel_i.c making bessel_j.d from ../../.././src/nmath/bessel_j.c making bessel_k.d from ../../.././src/nmath/bessel_k.c making bessel_y.d from ../../.././src/nmath/bessel_y.c making choose.d from ../../.././src/nmath/choose.c making snorm.d from ../../.././src/nmath/snorm.c making sexp.d from ../../.././src/nmath/sexp.c making dgamma.d from ../../.././src/nmath/dgamma.c making pgamma.d from ../../.././src/nmath/pgamma.c making qgamma.d from ../../.././src/nmath/qgamma.c making rgamma.d from ../../.././src/nmath/rgamma.c making dbeta.d from ../../.././src/nmath/dbeta.c making pbeta.d from ../../.././src/nmath/pbeta.c making qbeta.d from ../../.././src/nmath/qbeta.c making rbeta.d from ../../.././src/nmath/rbeta.c making dunif.d from ../../.././src/nmath/dunif.c making punif.d from ../../.././src/nmath/punif.c making qunif.d from ../../.././src/nmath/qunif.c making runif.d from ../../.././src/nmath/runif.c making dnorm.d from ../../.././src/nmath/dnorm.c making pnorm.d from ../../.././src/nmath/pnorm.c making qnorm.d from ../../.././src/nmath/qnorm.c making rnorm.d from ../../.././src/nmath/rnorm.c making dlnorm.d from ../../.././src/nmath/dlnorm.c making plnorm.d from ../../.././src/nmath/plnorm.c making qlnorm.d from ../../.././src/nmath/qlnorm.c making rlnorm.d from ../../.././src/nmath/rlnorm.c making df.d from ../../.././src/nmath/df.c making pf.d from ../../.././src/nmath/pf.c making qf.d from ../../.././src/nmath/qf.c making rf.d from ../../.././src/nmath/rf.c making dnf.d from ../../.././src/nmath/dnf.c making dt.d from ../../.././src/nmath/dt.c making pt.d from ../../.././src/nmath/pt.c making qt.d from ../../.././src/nmath/qt.c making rt.d from ../../.././src/nmath/rt.c making dnt.d from ../../.././src/nmath/dnt.c making dchisq.d from ../../.././src/nmath/dchisq.c making pchisq.d from ../../.././src/nmath/pchisq.c making qchisq.d from ../../.././src/nmath/qchisq.c making rchisq.d from ../../.././src/nmath/rchisq.c making rnchisq.d from ../../.././src/nmath/rnchisq.c making dbinom.d from ../../.././src/nmath/dbinom.c making pbinom.d from ../../.././src/nmath/pbinom.c making qbinom.d from ../../.././src/nmath/qbinom.c making rbinom.d from ../../.././src/nmath/rbinom.c making rmultinom.d from ../../.././src/nmath/rmultinom.c making dcauchy.d from ../../.././src/nmath/dcauchy.c making pcauchy.d from ../../.././src/nmath/pcauchy.c making qcauchy.d from ../../.././src/nmath/qcauchy.c making rcauchy.d from ../../.././src/nmath/rcauchy.c making dexp.d from ../../.././src/nmath/dexp.c making pexp.d from ../../.././src/nmath/pexp.c making qexp.d from ../../.././src/nmath/qexp.c making rexp.d from ../../.././src/nmath/rexp.c making dgeom.d from ../../.././src/nmath/dgeom.c making pgeom.d from ../../.././src/nmath/pgeom.c making qgeom.d from ../../.././src/nmath/qgeom.c making rgeom.d from ../../.././src/nmath/rgeom.c making dhyper.d from ../../.././src/nmath/dhyper.c making phyper.d from ../../.././src/nmath/phyper.c making qhyper.d from ../../.././src/nmath/qhyper.c making rhyper.d from ../../.././src/nmath/rhyper.c making dnbinom.d from ../../.././src/nmath/dnbinom.c making pnbinom.d from ../../.././src/nmath/pnbinom.c making qnbinom.d from ../../.././src/nmath/qnbinom.c making rnbinom.d from ../../.././src/nmath/rnbinom.c making dpois.d from ../../.././src/nmath/dpois.c making ppois.d from ../../.././src/nmath/ppois.c making qpois.d from ../../.././src/nmath/qpois.c making rpois.d from ../../.././src/nmath/rpois.c making dweibull.d from ../../.././src/nmath/dweibull.c making pweibull.d from ../../.././src/nmath/pweibull.c making qweibull.d from ../../.././src/nmath/qweibull.c making rweibull.d from ../../.././src/nmath/rweibull.c making dlogis.d from ../../.././src/nmath/dlogis.c making plogis.d from ../../.././src/nmath/plogis.c making qlogis.d from ../../.././src/nmath/qlogis.c making rlogis.d from ../../.././src/nmath/rlogis.c making dnchisq.d from ../../.././src/nmath/dnchisq.c making pnchisq.d from ../../.././src/nmath/pnchisq.c making qnchisq.d from ../../.././src/nmath/qnchisq.c making dnbeta.d from ../../.././src/nmath/dnbeta.c making pnbeta.d from ../../.././src/nmath/pnbeta.c making qnbeta.d from ../../.././src/nmath/qnbeta.c making pnf.d from ../../.././src/nmath/pnf.c making pnt.d from ../../.././src/nmath/pnt.c making qnf.d from ../../.././src/nmath/qnf.c making qnt.d from ../../.././src/nmath/qnt.c making ptukey.d from ../../.././src/nmath/ptukey.c making qtukey.d from ../../.././src/nmath/qtukey.c making toms708.d from ../../.././src/nmath/toms708.c making wilcox.d from ../../.././src/nmath/wilcox.c making signrank.d from ../../.././src/nmath/signrank.c make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/mlutils.c -o mlutils.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/d1mach.c -o d1mach.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/i1mach.c -o i1mach.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/fmax2.c -o fmax2.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/fmin2.c -o fmin2.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/fprec.c -o fprec.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/fround.c -o fround.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/ftrunc.c -o ftrunc.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/sign.c -o sign.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/fsign.c -o fsign.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/imax2.c -o imax2.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/imin2.c -o imin2.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/chebyshev.c -o chebyshev.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/log1p.c -o log1p.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/expm1.c -o expm1.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/lgammacor.c -o lgammacor.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/gammalims.c -o gammalims.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/stirlerr.c -o stirlerr.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/bd0.c -o bd0.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/gamma.c -o gamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/lgamma.c -o lgamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/gamma_cody.c -o gamma_cody.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/beta.c -o beta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/lbeta.c -o lbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/polygamma.c -o polygamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/cospi.c -o cospi.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/bessel_i.c -o bessel_i.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/bessel_j.c -o bessel_j.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/bessel_k.c -o bessel_k.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/bessel_y.c -o bessel_y.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/choose.c -o choose.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/snorm.c -o snorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/sexp.c -o sexp.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dgamma.c -o dgamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pgamma.c -o pgamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qgamma.c -o qgamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rgamma.c -o rgamma.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dbeta.c -o dbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pbeta.c -o pbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qbeta.c -o qbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rbeta.c -o rbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dunif.c -o dunif.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/punif.c -o punif.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qunif.c -o qunif.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/runif.c -o runif.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnorm.c -o dnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnorm.c -o pnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnorm.c -o qnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rnorm.c -o rnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dlnorm.c -o dlnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/plnorm.c -o plnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qlnorm.c -o qlnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rlnorm.c -o rlnorm.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/df.c -o df.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pf.c -o pf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qf.c -o qf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rf.c -o rf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnf.c -o dnf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dt.c -o dt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pt.c -o pt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qt.c -o qt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rt.c -o rt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnt.c -o dnt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dchisq.c -o dchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pchisq.c -o pchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qchisq.c -o qchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rchisq.c -o rchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rnchisq.c -o rnchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dbinom.c -o dbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pbinom.c -o pbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qbinom.c -o qbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rbinom.c -o rbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rmultinom.c -o rmultinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dcauchy.c -o dcauchy.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pcauchy.c -o pcauchy.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qcauchy.c -o qcauchy.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rcauchy.c -o rcauchy.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dexp.c -o dexp.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pexp.c -o pexp.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qexp.c -o qexp.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rexp.c -o rexp.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dgeom.c -o dgeom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pgeom.c -o pgeom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qgeom.c -o qgeom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rgeom.c -o rgeom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dhyper.c -o dhyper.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/phyper.c -o phyper.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qhyper.c -o qhyper.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rhyper.c -o rhyper.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnbinom.c -o dnbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnbinom.c -o pnbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnbinom.c -o qnbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rnbinom.c -o rnbinom.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dpois.c -o dpois.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/ppois.c -o ppois.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qpois.c -o qpois.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rpois.c -o rpois.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dweibull.c -o dweibull.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pweibull.c -o pweibull.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qweibull.c -o qweibull.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rweibull.c -o rweibull.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dlogis.c -o dlogis.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/plogis.c -o plogis.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qlogis.c -o qlogis.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/rlogis.c -o rlogis.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnchisq.c -o dnchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnchisq.c -o pnchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnchisq.c -o qnchisq.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/dnbeta.c -o dnbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnbeta.c -o pnbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnbeta.c -o qnbeta.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnf.c -o pnf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/pnt.c -o pnt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnf.c -o qnf.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qnt.c -o qnt.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/ptukey.c -o ptukey.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/qtukey.c -o qtukey.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/toms708.c -o toms708.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/wilcox.c -o wilcox.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/nmath/signrank.c -o signrank.o ar -cr libnmath.a mlutils.o d1mach.o i1mach.o fmax2.o fmin2.o fprec.o fround.o ftrunc.o sign.o fsign.o imax2.o imin2.o chebyshev.o log1p.o expm1.o lgammacor.o gammalims.o stirlerr.o bd0.o gamma.o lgamma.o gamma_cody.o beta.o lbeta.o polygamma.o cospi.o bessel_i.o bessel_j.o bessel_k.o bessel_y.o choose.o snorm.o sexp.o dgamma.o pgamma.o qgamma.o rgamma.o dbeta.o pbeta.o qbeta.o rbeta.o dunif.o punif.o qunif.o runif.o dnorm.o pnorm.o qnorm.o rnorm.o dlnorm.o plnorm.o qlnorm.o rlnorm.o df.o pf.o qf.o rf.o dnf.o dt.o pt.o qt.o rt.o dnt.o dchisq.o pchisq.o qchisq.o rchisq.o rnchisq.o dbinom.o pbinom.o qbinom.o rbinom.o rmultinom.o dcauchy.o pcauchy.o qcauchy.o rcauchy.o dexp.o pexp.o qexp.o rexp.o dgeom.o pgeom.o qgeom.o rgeom.o dhyper.o phyper.o qhyper.o rhyper.o dnbinom.o pnbinom.o qnbinom.o rnbinom.o dpois.o ppois.o qpois.o rpois.o dweibull.o pweibull.o qweibull.o rweibull.o dlogis.o plogis.o qlogis.o rlogis.o dnchisq.o pnchisq.o qnchisq.o dnbeta.o pnbeta.o qnbeta.o pnf.o pnt.o qnf.o qnt.o ptukey.o qtukey.o toms708.o wilcox.o signrank.o ranlib libnmath.a make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' config.status: creating src/unix/Makefile making Rembedded.d from ../../.././src/unix/Rembedded.c making dynload.d from ../../.././src/unix/dynload.c making system.d from ../../.././src/unix/system.c making sys-unix.d from ../../.././src/unix/sys-unix.c making sys-std.d from ../../.././src/unix/sys-std.c making X11.d from ../../.././src/unix/X11.c make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/Rembedded.c -o Rembedded.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/dynload.c -o dynload.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/system.c -o system.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/sys-unix.c -o sys-unix.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/sys-std.c -o sys-std.o x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/unix/X11.c -o X11.o ar -cr libunix.a Rembedded.o dynload.o system.o sys-unix.o sys-std.o X11.o ranlib libunix.a make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -DR_HOME='"/tmp/B.Qb_jAP/BUILD/R-3.4.3/build"' \ -o Rscript ../../.././src/unix/Rscript.c make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' config.status: creating src/main/Makefile making CommandLineArgs.d from ../../.././src/main/CommandLineArgs.c making Rdynload.d from ../../.././src/main/Rdynload.c making Renviron.d from ../../.././src/main/Renviron.c making RNG.d from ../../.././src/main/RNG.c making agrep.d from ../../.././src/main/agrep.c making apply.d from ../../.././src/main/apply.c making arithmetic.d from ../../.././src/main/arithmetic.c making array.d from ../../.././src/main/array.c making attrib.d from ../../.././src/main/attrib.c making bind.d from ../../.././src/main/bind.c making builtin.d from ../../.././src/main/builtin.c making character.d from ../../.././src/main/character.c making coerce.d from ../../.././src/main/coerce.c making colors.d from ../../.././src/main/colors.c making complex.d from ../../.././src/main/complex.c making connections.d from ../../.././src/main/connections.c making context.d from ../../.././src/main/context.c making cum.d from ../../.././src/main/cum.c making dcf.d from ../../.././src/main/dcf.c making datetime.d from ../../.././src/main/datetime.c making debug.d from ../../.././src/main/debug.c making deparse.d from ../../.././src/main/deparse.c making devices.d from ../../.././src/main/devices.c making dotcode.d from ../../.././src/main/dotcode.c making dounzip.d from ../../.././src/main/dounzip.c making dstruct.d from ../../.././src/main/dstruct.c making duplicate.d from ../../.././src/main/duplicate.c making edit.d from ../../.././src/main/edit.c making engine.d from ../../.././src/main/engine.c making envir.d from ../../.././src/main/envir.c making errors.d from ../../.././src/main/errors.c making eval.d from ../../.././src/main/eval.c making format.d from ../../.././src/main/format.c making gevents.d from ../../.././src/main/gevents.c making gram.d from ../../.././src/main/gram.c making gram-ex.d from ../../.././src/main/gram-ex.c making graphics.d from ../../.././src/main/graphics.c making grep.d from ../../.././src/main/grep.c making identical.d from ../../.././src/main/identical.c making inlined.d from ../../.././src/main/inlined.c making inspect.d from ../../.././src/main/inspect.c making internet.d from ../../.././src/main/internet.c making iosupport.d from ../../.././src/main/iosupport.c making lapack.d from ../../.././src/main/lapack.c making list.d from ../../.././src/main/list.c making localecharset.d from ../../.././src/main/localecharset.c making logic.d from ../../.././src/main/logic.c making main.d from ../../.././src/main/main.c making mapply.d from ../../.././src/main/mapply.c making match.d from ../../.././src/main/match.c making memory.d from ../../.././src/main/memory.c making names.d from ../../.././src/main/names.c making objects.d from ../../.././src/main/objects.c making options.d from ../../.././src/main/options.c making paste.d from ../../.././src/main/paste.c making platform.d from ../../.././src/main/platform.c making plot.d from ../../.././src/main/plot.c making plot3d.d from ../../.././src/main/plot3d.c making plotmath.d from ../../.././src/main/plotmath.c making print.d from ../../.././src/main/print.c making printarray.d from ../../.././src/main/printarray.c making printvector.d from ../../.././src/main/printvector.c making printutils.d from ../../.././src/main/printutils.c making qsort.d from ../../.././src/main/qsort.c making radixsort.d from ../../.././src/main/radixsort.c making random.d from ../../.././src/main/random.c making raw.d from ../../.././src/main/raw.c making registration.d from ../../.././src/main/registration.c making relop.d from ../../.././src/main/relop.c making rlocale.d from ../../.././src/main/rlocale.c making saveload.d from ../../.././src/main/saveload.c making scan.d from ../../.././src/main/scan.c making seq.d from ../../.././src/main/seq.c making serialize.d from ../../.././src/main/serialize.c making sort.d from ../../.././src/main/sort.c making source.d from ../../.././src/main/source.c making split.d from ../../.././src/main/split.c making sprintf.d from ../../.././src/main/sprintf.c making startup.d from ../../.././src/main/startup.c making subassign.d from ../../.././src/main/subassign.c making subscript.d from ../../.././src/main/subscript.c making subset.d from ../../.././src/main/subset.c making summary.d from ../../.././src/main/summary.c making sysutils.d from ../../.././src/main/sysutils.c making times.d from ../../.././src/main/times.c making unique.d from ../../.././src/main/unique.c making util.d from ../../.././src/main/util.c making version.d from ../../.././src/main/version.c making g_alab_her.d from ../../.././src/main/g_alab_her.c making g_cntrlify.d from ../../.././src/main/g_cntrlify.c making g_fontdb.d from ../../.././src/main/g_fontdb.c making g_her_glyph.d from ../../.././src/main/g_her_glyph.c making Rmain.d from ../../.././src/main/Rmain.c making alloca.d from ../../.././src/main/alloca.c making mkdtemp.d from ../../.././src/main/mkdtemp.c making strdup.d from ../../.././src/main/strdup.c making strncasecmp.d from ../../.././src/main/strncasecmp.c make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/CommandLineArgs.c -o CommandLineArgs.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/Rdynload.c -o Rdynload.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/Renviron.c -o Renviron.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/RNG.c -o RNG.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/agrep.c -o agrep.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/apply.c -o apply.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/arithmetic.c -o arithmetic.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/array.c -o array.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/attrib.c -o attrib.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/bind.c -o bind.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/builtin.c -o builtin.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/character.c -o character.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/coerce.c -o coerce.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/colors.c -o colors.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/complex.c -o complex.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/connections.c -o connections.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/context.c -o context.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/cum.c -o cum.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/dcf.c -o dcf.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/datetime.c -o datetime.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/debug.c -o debug.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/deparse.c -o deparse.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/devices.c -o devices.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/dotcode.c -o dotcode.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/dounzip.c -o dounzip.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/dstruct.c -o dstruct.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/duplicate.c -o duplicate.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/edit.c -o edit.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/engine.c -o engine.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/envir.c -o envir.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/errors.c -o errors.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/eval.c -o eval.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/format.c -o format.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/gevents.c -o gevents.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/gram.c -o gram.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/gram-ex.c -o gram-ex.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/graphics.c -o graphics.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/grep.c -o grep.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/identical.c -o identical.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/inlined.c -o inlined.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/inspect.c -o inspect.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/internet.c -o internet.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/iosupport.c -o iosupport.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/lapack.c -o lapack.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/list.c -o list.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/localecharset.c -o localecharset.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/logic.c -o logic.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/main.c -o main.o ../../.././src/main/main.c: In function 'dummy_ii': ../../.././src/main/main.c:1669:12: warning: function returns address of local variable [-Wreturn-local-addr] return (uintptr_t) ⅈ ^~~~~~~~~~~~~~~ x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/mapply.c -o mapply.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/match.c -o match.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/memory.c -o memory.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/names.c -o names.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/objects.c -o objects.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/options.c -o options.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/paste.c -o paste.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/platform.c -o platform.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/plot.c -o plot.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/plot3d.c -o plot3d.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/plotmath.c -o plotmath.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/print.c -o print.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/printarray.c -o printarray.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/printvector.c -o printvector.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/printutils.c -o printutils.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/qsort.c -o qsort.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/radixsort.c -o radixsort.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/random.c -o random.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/raw.c -o raw.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/registration.c -o registration.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/relop.c -o relop.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/rlocale.c -o rlocale.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/saveload.c -o saveload.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/scan.c -o scan.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/seq.c -o seq.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/serialize.c -o serialize.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/sort.c -o sort.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/source.c -o source.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/split.c -o split.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/sprintf.c -o sprintf.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/startup.c -o startup.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/subassign.c -o subassign.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/subscript.c -o subscript.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/subset.c -o subset.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/summary.c -o summary.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/sysutils.c -o sysutils.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/times.c -o times.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/unique.c -o unique.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/util.c -o util.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/version.c -o version.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/g_alab_her.c -o g_alab_her.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/g_cntrlify.c -o g_cntrlify.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/g_fontdb.c -o g_fontdb.o x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/g_her_glyph.c -o g_her_glyph.o gfortran -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/xxxpr.f -o xxxpr.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -shared -fopenmp -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a ../extra/tzone/libtz.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' mkdir -p -- /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/bin/exec mkdir -p -- /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/Rmain.c -o Rmain.o x86_64-tld-linux-gcc -Wl,--export-dynamic -fopenmp -L../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o R.bin Rmain.o -lR make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' making Rhttpd.d from ../../../.././src/modules/internet/Rhttpd.c making Rsock.d from ../../../.././src/modules/internet/Rsock.c making internet.d from ../../../.././src/modules/internet/internet.c making libcurl.d from ../../../.././src/modules/internet/libcurl.c making nanoftp.d from ../../../.././src/modules/internet/nanoftp.c making nanohttp.d from ../../../.././src/modules/internet/nanohttp.c making sock.d from ../../../.././src/modules/internet/sock.c making sockconn.d from ../../../.././src/modules/internet/sockconn.c make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/Rhttpd.c -o Rhttpd.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/Rsock.c -o Rsock.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/internet.c -o internet.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/libcurl.c -o libcurl.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/nanoftp.c -o nanoftp.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/nanohttp.c -o nanohttp.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/sock.c -o sock.o x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -fvisibility=hidden -c ../../../.././src/modules/internet/sockconn.c -o sockconn.o x86_64-tld-linux-gcc -shared -L../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o internet.so Rhttpd.o Rsock.o internet.o libcurl.o nanoftp.o nanohttp.o sock.o sockconn.o -lcurl -lcares -lnghttp2 -lidn2 -lrtmp -lz -lssl -lcrypto -lssh2 -lssh2 -lpsl -lssl -lcrypto -lgssapi -lldap -llber -lbrotlidec -lz -lR make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' mkdir -p -- /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/modules make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' making Lapack.d from ../../../.././src/modules/lapack/Lapack.c make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' x86_64-tld-linux-gcc -I. -I../../../src/include -I../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../.././src/modules/lapack/Lapack.c -o Lapack.o x86_64-tld-linux-gcc -shared -L../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o lapack.so Lapack.o -lR -llapack -lblas -lgfortran -lm -lquadmath make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' making devX11.d from ../../../.././src/modules/X11/devX11.c making rotated.d from ../../../.././src/modules/X11/rotated.c making rbitmap.d from ../../../.././src/modules/X11/rbitmap.c make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' x86_64-tld-linux-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../.././src/include -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/libpng16 -I../../../.././src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../.././src/modules/X11/devX11.c -o devX11.o x86_64-tld-linux-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../.././src/include -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/libpng16 -I../../../.././src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../.././src/modules/X11/rotated.c -o rotated.o x86_64-tld-linux-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../.././src/include -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/libpng16 -I../../../.././src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../.././src/modules/X11/rbitmap.c -o rbitmap.o x86_64-tld-linux-gcc -shared -L../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o R_X11.so devX11.o rotated.o rbitmap.o -ltiff -ljpeg -lpng16 -lz -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -L/usr/lib64 -lX11 -lXt -lXmu -lR -lm x86_64-tld-linux-gcc -I/usr/include/libpng16 -I. -I../../../src/include -I../../../.././src/include -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/libpng16 -I../../../.././src/library/grDevices/src/cairo -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../.././src/modules/X11/dataentry.c -o dataentry.o x86_64-tld-linux-gcc -shared -L../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o R_de.so dataentry.o -lSM -lICE -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -lX11 -lXext -L/usr/lib64 -lX11 -lXt -lXmu -lR -lm make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' mkdir -p -- ../../library make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/profile' building system startup profile mkdir -p -- ../../../library/base/R make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/profile' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' building package 'translations' mkdir -p -- ../../../library/translations make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' building package 'base' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' mkdir -p -- ../../../library/base/demo make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' building package 'tools' mkdir -p -- ../../../library/tools make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' mkdir -p -- ../../../library/tools/R make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' making text.d from ../../../../.././src/library/tools/src/text.c making init.d from ../../../../.././src/library/tools/src/init.c making Rmd5.d from ../../../../.././src/library/tools/src/Rmd5.c making md5.d from ../../../../.././src/library/tools/src/md5.c making signals.d from ../../../../.././src/library/tools/src/signals.c making install.d from ../../../../.././src/library/tools/src/install.c making getfmts.d from ../../../../.././src/library/tools/src/getfmts.c making http.d from ../../../../.././src/library/tools/src/http.c making gramLatex.d from ../../../../.././src/library/tools/src/gramLatex.c making gramRd.d from ../../../../.././src/library/tools/src/gramRd.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/text.c -o text.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/Rmd5.c -o Rmd5.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/md5.c -o md5.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/signals.c -o signals.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/install.c -o install.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/getfmts.c -o getfmts.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/http.c -o http.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/gramLatex.c -o gramLatex.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tools/src/gramRd.c -o gramRd.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o tools.so text.o init.o Rmd5.o md5.o signals.o install.o getfmts.o http.o gramLatex.o gramRd.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' mkdir -p -- ../../../../library/tools/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' installing 'sysdata.rda' Warning message: In strptime(paste(.leap.seconds, "23:59:60"), "%Y-%m-%d %H:%M:%S", : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' Warning message: In strptime(paste(.leap.seconds, "23:59:60"), "%Y-%m-%d %H:%M:%S", : system timezone name is unknown: set environment variable TZ make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' building package 'compiler' mkdir -p -- ../../../library/compiler make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' mkdir -p -- ../../../library/compiler/R Warning message: In strptime(paste(.leap.seconds, "23:59:60"), "%Y-%m-%d %H:%M:%S", : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' byte-compiling package 'compiler' Warning message: In strptime(paste(.leap.seconds, "23:59:60"), "%Y-%m-%d %H:%M:%S", : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' byte-compiling package 'base' Warning message: In strptime(paste(.leap.seconds, "23:59:60"), "%Y-%m-%d %H:%M:%S", : system timezone name is unknown: set environment variable TZ make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' byte-compiling package 'tools' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' building package 'utils' mkdir -p -- ../../../library/utils mkdir -p -- ../../../library/utils/doc make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' mkdir -p -- ../../../library/utils/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ mkdir -p -- ../../../library/utils/Sweave mkdir -p -- ../../../library/utils/misc make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' making init.d from ../../../../.././src/library/utils/src/init.c making io.d from ../../../../.././src/library/utils/src/io.c making size.d from ../../../../.././src/library/utils/src/size.c making sock.d from ../../../../.././src/library/utils/src/sock.c making stubs.d from ../../../../.././src/library/utils/src/stubs.c making utils.d from ../../../../.././src/library/utils/src/utils.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/io.c -o io.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/size.c -o size.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/sock.c -o sock.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/stubs.c -o stubs.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/utils/src/utils.c -o utils.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o utils.so init.o io.o size.o sock.o stubs.o utils.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' mkdir -p -- ../../../../library/utils/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' installing 'sysdata.rda' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' byte-compiling package 'utils' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' building package 'grDevices' mkdir -p -- ../../../library/grDevices make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' mkdir -p -- ../../../library/grDevices/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ mkdir -p -- ../../../library/grDevices/afm mkdir -p -- ../../../library/grDevices/enc mkdir -p -- ../../../library/grDevices/icc make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' making axis_scales.d from ../../../../.././src/library/grDevices/src/axis_scales.c making chull.d from ../../../../.././src/library/grDevices/src/chull.c making devices.d from ../../../../.././src/library/grDevices/src/devices.c making init.d from ../../../../.././src/library/grDevices/src/init.c making stubs.d from ../../../../.././src/library/grDevices/src/stubs.c making colors.d from ../../../../.././src/library/grDevices/src/colors.c making devCairo.d from ../../../../.././src/library/grDevices/src/devCairo.c making devPicTeX.d from ../../../../.././src/library/grDevices/src/devPicTeX.c making devPS.d from ../../../../.././src/library/grDevices/src/devPS.c making devQuartz.d from ../../../../.././src/library/grDevices/src/devQuartz.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/axis_scales.c -o axis_scales.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/chull.c -o chull.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devices.c -o devices.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/stubs.c -o stubs.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/colors.c -o colors.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devCairo.c -o devCairo.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devPicTeX.c -o devPicTeX.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devPS.c -o devPS.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devQuartz.c -o devQuartz.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' mkdir -p -- ../../../../library/grDevices/libs make[7]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' making cairoBM.d from ../../../../../.././src/library/grDevices/src/cairo/cairoBM.c make[8]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[9]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' x86_64-tld-linux-gcc -I. -I../../../../../src/include -I../../../../../.././src/include -I/usr/include/pango-1.0 -I/usr/include/cairo -I/usr/include/pixman-1 -I/usr/include/uuid -I/usr/include/freetype2 -I/usr/include/harfbuzz -I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/libpng16 -I../../../../../.././src/modules/X11 -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../../.././src/library/grDevices/src/cairo/cairoBM.c -o cairoBM.o x86_64-tld-linux-gcc -shared -L../../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o cairo.so cairoBM.o ../../../../../src/modules/X11/rbitmap.o -ltiff -ljpeg -lpng16 -lz -lpangocairo-1.0 -lpango-1.0 -lgobject-2.0 -lglib-2.0 -lpng16 -lz -lcairo -L../../../../../lib -lR -lm make[9]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[8]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[7]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' byte-compiling package 'grDevices' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' building package 'graphics' mkdir -p -- ../../../library/graphics make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' mkdir -p -- ../../../library/graphics/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' making init.d from ../../../../.././src/library/graphics/src/init.c making base.d from ../../../../.././src/library/graphics/src/base.c making graphics.d from ../../../../.././src/library/graphics/src/graphics.c making par.d from ../../../../.././src/library/graphics/src/par.c making plot.d from ../../../../.././src/library/graphics/src/plot.c making plot3d.d from ../../../../.././src/library/graphics/src/plot3d.c making stem.d from ../../../../.././src/library/graphics/src/stem.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/base.c -o base.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/graphics.c -o graphics.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/par.c -o par.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/plot.c -o plot.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/plot3d.c -o plot3d.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I../../../../.././src/main -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/graphics/src/stem.c -o stem.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o graphics.so init.o base.o graphics.o par.o plot.o plot3d.o stem.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' mkdir -p -- ../../../../library/graphics/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' byte-compiling package 'graphics' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' building package 'stats' mkdir -p -- ../../../library/stats make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' mkdir -p -- ../../../library/stats/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' making init.d from ../../../../.././src/library/stats/src/init.c making kmeans.d from ../../../../.././src/library/stats/src/kmeans.c making ansari.d from ../../../../.././src/library/stats/src/ansari.c making bandwidths.d from ../../../../.././src/library/stats/src/bandwidths.c making chisqsim.d from ../../../../.././src/library/stats/src/chisqsim.c making d2x2xk.d from ../../../../.././src/library/stats/src/d2x2xk.c making fexact.d from ../../../../.././src/library/stats/src/fexact.c making kendall.d from ../../../../.././src/library/stats/src/kendall.c making ks.d from ../../../../.././src/library/stats/src/ks.c making line.d from ../../../../.././src/library/stats/src/line.c making smooth.d from ../../../../.././src/library/stats/src/smooth.c making prho.d from ../../../../.././src/library/stats/src/prho.c making swilk.d from ../../../../.././src/library/stats/src/swilk.c making ksmooth.d from ../../../../.././src/library/stats/src/ksmooth.c making loessc.d from ../../../../.././src/library/stats/src/loessc.c making monoSpl.d from ../../../../.././src/library/stats/src/monoSpl.c making isoreg.d from ../../../../.././src/library/stats/src/isoreg.c making Srunmed.d from ../../../../.././src/library/stats/src/Srunmed.c making dblcen.d from ../../../../.././src/library/stats/src/dblcen.c making distance.d from ../../../../.././src/library/stats/src/distance.c making hclust-utils.d from ../../../../.././src/library/stats/src/hclust-utils.c making nls.d from ../../../../.././src/library/stats/src/nls.c making rWishart.d from ../../../../.././src/library/stats/src/rWishart.c making HoltWinters.d from ../../../../.././src/library/stats/src/HoltWinters.c making PPsum.d from ../../../../.././src/library/stats/src/PPsum.c making arima.d from ../../../../.././src/library/stats/src/arima.c making burg.d from ../../../../.././src/library/stats/src/burg.c making filter.d from ../../../../.././src/library/stats/src/filter.c making mAR.d from ../../../../.././src/library/stats/src/mAR.c making pacf.d from ../../../../.././src/library/stats/src/pacf.c making starma.d from ../../../../.././src/library/stats/src/starma.c making port.d from ../../../../.././src/library/stats/src/port.c making family.d from ../../../../.././src/library/stats/src/family.c making sbart.d from ../../../../.././src/library/stats/src/sbart.c making approx.d from ../../../../.././src/library/stats/src/approx.c making loglin.d from ../../../../.././src/library/stats/src/loglin.c making lowess.d from ../../../../.././src/library/stats/src/lowess.c making massdist.d from ../../../../.././src/library/stats/src/massdist.c making splines.d from ../../../../.././src/library/stats/src/splines.c making lm.d from ../../../../.././src/library/stats/src/lm.c making complete_cases.d from ../../../../.././src/library/stats/src/complete_cases.c making cov.d from ../../../../.././src/library/stats/src/cov.c making deriv.d from ../../../../.././src/library/stats/src/deriv.c making fft.d from ../../../../.././src/library/stats/src/fft.c making fourier.d from ../../../../.././src/library/stats/src/fourier.c making model.d from ../../../../.././src/library/stats/src/model.c making optim.d from ../../../../.././src/library/stats/src/optim.c making optimize.d from ../../../../.././src/library/stats/src/optimize.c making integrate.d from ../../../../.././src/library/stats/src/integrate.c making random.d from ../../../../.././src/library/stats/src/random.c making distn.d from ../../../../.././src/library/stats/src/distn.c making zeroin.d from ../../../../.././src/library/stats/src/zeroin.c making rcont.d from ../../../../.././src/library/stats/src/rcont.c making influence.d from ../../../../.././src/library/stats/src/influence.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/kmeans.c -o kmeans.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/ansari.c -o ansari.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/bandwidths.c -o bandwidths.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/chisqsim.c -o chisqsim.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/d2x2xk.c -o d2x2xk.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/fexact.c -o fexact.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/kendall.c -o kendall.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/ks.c -o ks.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/line.c -o line.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/smooth.c -o smooth.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/prho.c -o prho.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/swilk.c -o swilk.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/ksmooth.c -o ksmooth.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/loessc.c -o loessc.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/monoSpl.c -o monoSpl.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/isoreg.c -o isoreg.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/Srunmed.c -o Srunmed.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/dblcen.c -o dblcen.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/distance.c -o distance.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/hclust-utils.c -o hclust-utils.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/nls.c -o nls.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/rWishart.c -o rWishart.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/HoltWinters.c -o HoltWinters.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/PPsum.c -o PPsum.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/arima.c -o arima.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/burg.c -o burg.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/filter.c -o filter.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/mAR.c -o mAR.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/pacf.c -o pacf.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/starma.c -o starma.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/port.c -o port.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/family.c -o family.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/sbart.c -o sbart.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/approx.c -o approx.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/loglin.c -o loglin.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/lowess.c -o lowess.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/massdist.c -o massdist.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/splines.c -o splines.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/lm.c -o lm.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/complete_cases.c -o complete_cases.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/cov.c -o cov.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/deriv.c -o deriv.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/fft.c -o fft.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/fourier.c -o fourier.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/model.c -o model.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/optim.c -o optim.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/optimize.c -o optimize.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/integrate.c -o integrate.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/random.c -o random.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/distn.c -o distn.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/zeroin.c -o zeroin.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/rcont.c -o rcont.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fopenmp -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/influence.c -o influence.o gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/bsplvd.f -o bsplvd.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/bvalue.f -o bvalue.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/bvalus.f -o bvalus.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/loessf.f -o loessf.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/ppr.f -o ppr.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/qsbart.f -o qsbart.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/sgram.f -o sgram.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/sinerp.f -o sinerp.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/sslvrg.f -o sslvrg.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/stxwx.f -o stxwx.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/hclust.f -o hclust.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/kmns.f -o kmns.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/eureka.f -o eureka.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/stl.f -o stl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -ffloat-store -c ../../../../.././src/library/stats/src/portsrc.f -o portsrc.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/stats/src/lminfl.f -o lminfl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o stats.so init.o kmeans.o ansari.o bandwidths.o chisqsim.o d2x2xk.o fexact.o kendall.o ks.o line.o smooth.o prho.o swilk.o ksmooth.o loessc.o monoSpl.o isoreg.o Srunmed.o dblcen.o distance.o hclust-utils.o nls.o rWishart.o HoltWinters.o PPsum.o arima.o burg.o filter.o mAR.o pacf.o starma.o port.o family.o sbart.o approx.o loglin.o lowess.o massdist.o splines.o lm.o complete_cases.o cov.o deriv.o fft.o fourier.o model.o optim.o optimize.o integrate.o random.o distn.o zeroin.o rcont.o influence.o bsplvd.o bvalue.o bvalus.o loessf.o ppr.o qsbart.o sgram.o sinerp.o sslvrg.o stxwx.o hclust.o kmns.o eureka.o stl.o portsrc.o lminfl.o -fopenmp -llapack -lblas -lgfortran -lm -lquadmath -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' mkdir -p -- ../../../../library/stats/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' byte-compiling package 'stats' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' building package 'datasets' mkdir -p -- ../../../library/datasets make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' mkdir -p -- ../../../library/datasets/data make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' building package 'methods' mkdir -p -- ../../../library/methods make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' mkdir -p -- ../../../library/methods/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' making do_substitute_direct.d from ../../../../.././src/library/methods/src/do_substitute_direct.c making init.d from ../../../../.././src/library/methods/src/init.c making methods_list_dispatch.d from ../../../../.././src/library/methods/src/methods_list_dispatch.c making slot.d from ../../../../.././src/library/methods/src/slot.c making class_support.d from ../../../../.././src/library/methods/src/class_support.c making tests.d from ../../../../.././src/library/methods/src/tests.c making utils.d from ../../../../.././src/library/methods/src/utils.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/do_substitute_direct.c -o do_substitute_direct.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/methods_list_dispatch.c -o methods_list_dispatch.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/slot.c -o slot.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/class_support.c -o class_support.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/tests.c -o tests.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/methods/src/utils.c -o utils.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o methods.so do_substitute_direct.o init.o methods_list_dispatch.o slot.o class_support.o tests.o utils.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' mkdir -p -- ../../../../library/methods/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' byte-compiling 'methods' initializing class and method definitions ... done make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' building package 'grid' mkdir -p -- ../../../library/grid mkdir -p -- ../../../library/grid/doc make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' mkdir -p -- ../../../library/grid/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' making gpar.d from ../../../../.././src/library/grid/src/gpar.c making grid.d from ../../../../.././src/library/grid/src/grid.c making just.d from ../../../../.././src/library/grid/src/just.c making layout.d from ../../../../.././src/library/grid/src/layout.c making matrix.d from ../../../../.././src/library/grid/src/matrix.c making register.d from ../../../../.././src/library/grid/src/register.c making state.d from ../../../../.././src/library/grid/src/state.c making unit.d from ../../../../.././src/library/grid/src/unit.c making util.d from ../../../../.././src/library/grid/src/util.c making viewport.d from ../../../../.././src/library/grid/src/viewport.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/gpar.c -o gpar.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/grid.c -o grid.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/just.c -o just.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/layout.c -o layout.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/matrix.c -o matrix.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/register.c -o register.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/state.c -o state.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/unit.c -o unit.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/util.c -o util.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grid/src/viewport.c -o viewport.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o grid.so gpar.o grid.o just.o layout.o matrix.o register.o state.o unit.o util.o viewport.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' mkdir -p -- ../../../../library/grid/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' byte-compiling package 'grid' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' building package 'splines' mkdir -p -- ../../../library/splines make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' mkdir -p -- ../../../library/splines/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' making splines.d from ../../../../.././src/library/splines/src/splines.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/splines/src/splines.c -o splines.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o splines.so splines.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' mkdir -p -- ../../../../library/splines/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' byte-compiling package 'splines' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' building package 'stats4' mkdir -p -- ../../../library/stats4 make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' mkdir -p -- ../../../library/stats4/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' byte-compiling package 'stats4' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' building package 'tcltk' mkdir -p -- ../../../library/tcltk/R make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ mkdir -p -- ../../../library/tcltk/exec make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' making init.d from ../../../../.././src/library/tcltk/src/init.c making tcltk.d from ../../../../.././src/library/tcltk/src/tcltk.c making tcltk_unix.d from ../../../../.././src/library/tcltk/src/tcltk_unix.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tcltk/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tcltk/src/tcltk.c -o tcltk.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -I/usr/include -I/usr/include -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/tcltk/src/tcltk_unix.c -o tcltk_unix.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o tcltk.so init.o tcltk.o tcltk_unix.o -L/usr/lib64 -ltcl8.6 -L/usr/lib64 -ltk8.6 -L/usr/lib64 -lX11 -lXss -lXext -lm -L../../../../lib -lR make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' mkdir -p -- ../../../../library/tcltk/libs make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' byte-compiling package 'tcltk' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' building package 'parallel' mkdir -p -- ../../../library/parallel mkdir -p -- ../../../library/parallel/doc make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' mkdir -p -- ../../../library/parallel/R Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' making init.d from ../../../../.././src/library/parallel/src/init.c making rngstream.d from ../../../../.././src/library/parallel/src/rngstream.c making fork.d from ../../../../.././src/library/parallel/src/fork.c x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/parallel/src/init.c -o init.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/parallel/src/rngstream.c -o rngstream.o x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/parallel/src/fork.c -o fork.o x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o parallel.so init.o rngstream.o fork.o -L../../../../lib -lR make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' mkdir -p -- ../../../../library/parallel/libs make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' byte-compiling package 'parallel' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' installing parsed NAMESPACE files make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[1]: Entering 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'/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' installing parsed Rd make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' Warning in format.POSIXlt(as.POSIXlt(x), ...) : system timezone name is unknown: set environment variable TZ base stats utils methods graphics grDevices datasets grid Warning in as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ tools tcltk splines stats4 compiler parallel make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' building/updating package metadata ... make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' writing package indices make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/Recommended' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/Recommended' begin installing recommended package MASS Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'MASS' ... ** package 'MASS' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpgrfQ0H/R.INSTALL2661c60f832/MASS/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c MASS.c -o MASS.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c lqs.c -o lqs.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o MASS.so MASS.o lqs.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpgrfQ0H/R.INSTALL2661c60f832/MASS/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/MASS/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (MASS) begin installing recommended package lattice Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'lattice' ... ** package 'lattice' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/Rtmpk58Gjn/R.INSTALL268430317408/lattice/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c threeDplot.c -o threeDplot.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o lattice.so init.o threeDplot.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/Rtmpk58Gjn/R.INSTALL268430317408/lattice/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/lattice/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (lattice) begin installing recommended package Matrix Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'Matrix' ... ** package 'Matrix' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c CHMfactor.c -o CHMfactor.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c Csparse.c -o Csparse.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c TMatrix_as.c -o TMatrix_as.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c Tsparse.c -o Tsparse.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c Mutils.c -o Mutils.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chm_common.c -o chm_common.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cs.c -o cs.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cs_utils.c -o cs_utils.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dense.c -o dense.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgCMatrix.c -o dgCMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgTMatrix.c -o dgTMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgeMatrix.c -o dgeMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dpoMatrix.c -o dpoMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dppMatrix.c -o dppMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dsCMatrix.c -o dsCMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dsyMatrix.c -o dsyMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dspMatrix.c -o dspMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dtCMatrix.c -o dtCMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dtTMatrix.c -o dtTMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dtrMatrix.c -o dtrMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dtpMatrix.c -o dtpMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c factorizations.c -o factorizations.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ldense.c -o ldense.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c lgCMatrix.c -o lgCMatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sparseQR.c -o sparseQR.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -I./SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c abIndex.c -o abIndex.o make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD' ( cd Lib ; /usr/bin/make clean ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD/Lib' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD' ( cd Source ; /usr/bin/make clean ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD/Source' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD' ( cd Source ; /usr/bin/make clean ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD/Source' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/SuiteSparse_config' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/SuiteSparse_config' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD' ( cd Lib ; /usr/bin/make -f "/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc/Makeconf" -f Makefile ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD/Lib' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_aat.c -o cholmod_aat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_add.c -o cholmod_add.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_band.c -o cholmod_band.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_change_factor.c -o cholmod_change_factor.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_common.c -o cholmod_common.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_complex.c -o cholmod_complex.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_copy.c -o cholmod_copy.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_dense.c -o cholmod_dense.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_error.c -o cholmod_error.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_factor.c -o cholmod_factor.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_memory.c -o cholmod_memory.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_sparse.c -o cholmod_sparse.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_transpose.c -o cholmod_transpose.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_triplet.c -o cholmod_triplet.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Core/cholmod_version.c -o cholmod_version.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Check/cholmod_check.c -o cholmod_check.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Check/cholmod_read.c -o cholmod_read.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Check/cholmod_write.c -o cholmod_write.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_amd.c -o cholmod_amd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_analyze.c -o cholmod_analyze.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_colamd.c -o cholmod_colamd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_etree.c -o cholmod_etree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_factorize.c -o cholmod_factorize.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_postorder.c -o cholmod_postorder.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_rcond.c -o cholmod_rcond.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_resymbol.c -o cholmod_resymbol.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_rowcolcounts.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_rowfac.c -o cholmod_rowfac.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_solve.c -o cholmod_solve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Cholesky/cholmod_spsolve.c -o cholmod_spsolve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_drop.c -o cholmod_drop.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_horzcat.c -o cholmod_horzcat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_norm.c -o cholmod_norm.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_scale.c -o cholmod_scale.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_sdmult.c -o cholmod_sdmult.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_ssmult.c -o cholmod_ssmult.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_submatrix.c -o cholmod_submatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_vertcat.c -o cholmod_vertcat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../MatrixOps/cholmod_symmetry.c -o cholmod_symmetry.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Modify/cholmod_rowadd.c -o cholmod_rowadd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Modify/cholmod_rowdel.c -o cholmod_rowdel.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Modify/cholmod_updown.c -o cholmod_updown.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Supernodal/cholmod_super_numeric.c -o cholmod_super_numeric.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Supernodal/cholmod_super_solve.c -o cholmod_super_solve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_super_symbolic.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_aat.c -o cholmod_l_aat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_add.c -o cholmod_l_add.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_band.c -o cholmod_l_band.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_change_factor.c -o cholmod_l_change_factor.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_common.c -o cholmod_l_common.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_complex.c -o cholmod_l_complex.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_copy.c -o cholmod_l_copy.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_dense.c -o cholmod_l_dense.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_error.c -o cholmod_l_error.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_factor.c -o cholmod_l_factor.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_memory.c -o cholmod_l_memory.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_sparse.c -o cholmod_l_sparse.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_transpose.c -o cholmod_l_transpose.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_triplet.c -o cholmod_l_triplet.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Core/cholmod_version.c -o cholmod_l_version.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Check/cholmod_check.c -o cholmod_l_check.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Check/cholmod_read.c -o cholmod_l_read.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Check/cholmod_write.c -o cholmod_l_write.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_amd.c -o cholmod_l_amd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_analyze.c -o cholmod_l_analyze.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_colamd.c -o cholmod_l_colamd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_etree.c -o cholmod_l_etree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_factorize.c -o cholmod_l_factorize.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_postorder.c -o cholmod_l_postorder.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_rcond.c -o cholmod_l_rcond.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_resymbol.c -o cholmod_l_resymbol.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_rowcolcounts.c -o cholmod_l_rowcolcounts.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_rowfac.c -o cholmod_l_rowfac.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_solve.c -o cholmod_l_solve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Cholesky/cholmod_spsolve.c -o cholmod_l_spsolve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_drop.c -o cholmod_l_drop.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_horzcat.c -o cholmod_l_horzcat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_norm.c -o cholmod_l_norm.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_scale.c -o cholmod_l_scale.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_sdmult.c -o cholmod_l_sdmult.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_ssmult.c -o cholmod_l_ssmult.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_submatrix.c -o cholmod_l_submatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_vertcat.c -o cholmod_l_vertcat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../MatrixOps/cholmod_symmetry.c -o cholmod_l_symmetry.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Modify/cholmod_rowadd.c -o cholmod_l_rowadd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Modify/cholmod_rowdel.c -o cholmod_l_rowdel.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Modify/cholmod_updown.c -o cholmod_l_updown.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Supernodal/cholmod_super_numeric.c -o cholmod_l_super_numeric.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Supernodal/cholmod_super_solve.c -o cholmod_l_super_solve.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../../AMD/Include -I../../AMD/Source -I../../COLAMD/Include -I../Include -I../../SuiteSparse_config -DNPARTITION -DNPRINT -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -DDLONG -c ../Supernodal/cholmod_super_symbolic.c -o cholmod_l_super_symbolic.o ar -rucs ../../CHOLMOD.a cholmod_aat.o cholmod_add.o cholmod_band.o cholmod_change_factor.o cholmod_common.o cholmod_complex.o cholmod_copy.o cholmod_dense.o cholmod_error.o cholmod_factor.o cholmod_memory.o cholmod_sparse.o cholmod_transpose.o cholmod_triplet.o cholmod_version.o cholmod_check.o cholmod_read.o cholmod_write.o cholmod_amd.o cholmod_analyze.o cholmod_colamd.o cholmod_etree.o cholmod_factorize.o cholmod_postorder.o cholmod_rcond.o cholmod_resymbol.o cholmod_rowcolcounts.o cholmod_rowfac.o cholmod_solve.o cholmod_spsolve.o cholmod_drop.o cholmod_horzcat.o cholmod_norm.o cholmod_scale.o cholmod_sdmult.o cholmod_ssmult.o cholmod_submatrix.o cholmod_vertcat.o cholmod_symmetry.o cholmod_rowadd.o cholmod_rowdel.o cholmod_updown.o cholmod_super_numeric.o cholmod_super_solve.o cholmod_super_symbolic.o cholmod_l_aat.o cholmod_l_add.o cholmod_l_band.o cholmod_l_change_factor.o cholmod_l_common.o cholmod_l_complex.o cholmod_l_copy.o cholmod_l_dense.o cholmod_l_error.o cholmod_l_factor.o cholmod_l_memory.o cholmod_l_sparse.o cholmod_l_transpose.o cholmod_l_triplet.o cholmod_l_version.o cholmod_l_check.o cholmod_l_read.o cholmod_l_write.o cholmod_l_amd.o cholmod_l_analyze.o cholmod_l_colamd.o cholmod_l_etree.o cholmod_l_factorize.o cholmod_l_postorder.o cholmod_l_rcond.o cholmod_l_resymbol.o cholmod_l_rowcolcounts.o cholmod_l_rowfac.o cholmod_l_solve.o cholmod_l_spsolve.o cholmod_l_drop.o cholmod_l_horzcat.o cholmod_l_norm.o cholmod_l_scale.o cholmod_l_sdmult.o cholmod_l_ssmult.o cholmod_l_submatrix.o cholmod_l_vertcat.o cholmod_l_symmetry.o cholmod_l_rowadd.o cholmod_l_rowdel.o cholmod_l_updown.o cholmod_l_super_numeric.o cholmod_l_super_solve.o cholmod_l_super_symbolic.o make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD/Lib' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/CHOLMOD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD' ( cd Source ; /usr/bin/make -f "/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD/Source' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c colamd_global.c -o colamd_global.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c colamd.c -o colamd.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c colamd.c -o colamd_l.o ar -rucs ../../COLAMD.a colamd_global.o colamd.o colamd_l.o make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD/Source' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/COLAMD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD' ( cd Source ; /usr/bin/make -f "/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc/Makeconf" -f Makefile lib ) make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD/Source' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_aat.c -o amd_i_aat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_aat.c -o amd_l_aat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_1.c -o amd_i_1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_1.c -o amd_l_1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_2.c -o amd_i_2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_2.c -o amd_l_2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_postorder.c -o amd_i_postorder.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_postorder.c -o amd_l_postorder.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_post_tree.c -o amd_i_post_tree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_post_tree.c -o amd_l_post_tree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_defaults.c -o amd_i_defaults.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_defaults.c -o amd_l_defaults.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_order.c -o amd_i_order.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_order.c -o amd_l_order.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_control.c -o amd_i_control.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_control.c -o amd_l_control.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_info.c -o amd_i_info.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_info.c -o amd_l_info.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_valid.c -o amd_i_valid.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_valid.c -o amd_l_valid.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_preprocess.c -o amd_i_preprocess.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_preprocess.c -o amd_l_preprocess.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_dump.c -o amd_i_dump.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_dump.c -o amd_l_dump.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDINT -c amd_global.c -o amd_i_global.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I../Include -I../../SuiteSparse_config -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -I../Include -DDLONG -c amd_global.c -o amd_l_global.o ar -rucs ../../AMD.a amd_i_aat.o amd_l_aat.o amd_i_1.o amd_l_1.o amd_i_2.o amd_l_2.o amd_i_postorder.o amd_l_postorder.o amd_i_post_tree.o amd_l_post_tree.o amd_i_defaults.o amd_l_defaults.o amd_i_order.o amd_l_order.o amd_i_control.o amd_l_control.o amd_i_info.o amd_l_info.o amd_i_valid.o amd_l_valid.o amd_i_preprocess.o amd_l_preprocess.o amd_i_dump.o amd_l_dump.o amd_i_global.o amd_l_global.o make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD/Source' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/AMD' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/SuiteSparse_config' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -DNTIMER -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c SuiteSparse_config.c -o SuiteSparse_config.o ar -rucs ../SuiteSparse_config.a SuiteSparse_config.o make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src/SuiteSparse_config' x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o Matrix.so CHMfactor.o Csparse.o TMatrix_as.o Tsparse.o init.o Mutils.o chm_common.o cs.o cs_utils.o dense.o dgCMatrix.o dgTMatrix.o dgeMatrix.o dpoMatrix.o dppMatrix.o dsCMatrix.o dsyMatrix.o dspMatrix.o dtCMatrix.o dtTMatrix.o dtrMatrix.o dtpMatrix.o factorizations.o ldense.o lgCMatrix.o sparseQR.o abIndex.o CHOLMOD.a COLAMD.a AMD.a SuiteSparse_config.a -llapack -lblas -lgfortran -lm -lquadmath -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpuhraEz/R.INSTALL26ad76a3690/Matrix/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/Matrix/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for 'chol2inv' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'chol2inv' from package 'base' in package 'Matrix' Creating a generic function for 'diag' from package 'base' in package 'Matrix' Creating a generic function for 'drop' from package 'base' in package 'Matrix' Creating a generic function for 'cov2cor' from package 'stats' in package 'Matrix' Creating a generic function for 'unname' from package 'base' in package 'Matrix' Creating a generic function for 'norm' from package 'base' in package 'Matrix' Creating a generic function for 'rcond' from 'base' in package 'Matrix' (from the saved implicit definition) Creating a generic function for 'rcond' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"matrix.csr","dgRMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"dgRMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","dgCMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"dgCMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","dgTMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dgTMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"dsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csr","dgCMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","dgCMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","RsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.csc","CsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.coo","TsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csr","CsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","CsparseMatrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","TsparseMatrix"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","TsparseMatrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.csr"': no definition for class "matrix.csr" in method for 'coerce' with signature '"CsparseMatrix","matrix.coo"': no definition for class "matrix.coo" in method for 'coerce' with signature '"CsparseMatrix","matrix.csc"': no definition for class "matrix.csc" in method for 'coerce' with signature '"matrix.csr","Matrix"': no definition for class "matrix.csr" in method for 'coerce' with signature '"matrix.coo","Matrix"': no definition for class "matrix.coo" in method for 'coerce' with signature '"matrix.csc","Matrix"': no definition for class "matrix.csc" Creating a generic function for 'colSums' from package 'base' in package 'Matrix' Creating a generic function for 'colMeans' from package 'base' in package 'Matrix' Creating a generic function for 'rowSums' from package 'base' in package 'Matrix' Creating a generic function for 'rowMeans' from package 'base' in package 'Matrix' in method for 'colSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowSums' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'colMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" in method for 'rowMeans' with signature 'x="igCMatrix"': no definition for class "igCMatrix" Creating a generic function for 'zapsmall' from package 'base' in package 'Matrix' Creating a generic function for 'diag<-' from package 'base' in package 'Matrix' Creating a generic function for 'crossprod' from package 'base' in package 'Matrix' Creating a generic function for 'tcrossprod' from package 'base' in package 'Matrix' Creating a generic function for 'which' from package 'base' in package 'Matrix' in method for 'coerce' with signature '"graphAM","sparseMatrix"': no definition for class "graphAM" in method for 'coerce' with signature '"graph","CsparseMatrix"': no definition for class "graph" in method for 'coerce' with signature '"graph","Matrix"': no definition for class "graph" in method for 'coerce' with signature '"graphNEL","CsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"graphNEL","TsparseMatrix"': no definition for class "graphNEL" in method for 'coerce' with signature '"sparseMatrix","graph"': no definition for class "graph" in method for 'coerce' with signature '"sparseMatrix","graphNEL"': no definition for class "graphNEL" in method for 'coerce' with signature '"TsparseMatrix","graphNEL"': no definition for class "graphNEL" Creating a generic function for 'qr.R' from package 'base' in package 'Matrix' Creating a generic function for 'qr.Q' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qy' from package 'base' in package 'Matrix' Creating a generic function for 'qr.qty' from package 'base' in package 'Matrix' Creating a generic function for 'qr.coef' from package 'base' in package 'Matrix' Creating a generic function for 'qr.resid' from package 'base' in package 'Matrix' Creating a generic function for 'qr.fitted' from package 'base' in package 'Matrix' Creating a generic function for 'toeplitz' from package 'stats' in package 'Matrix' ** help *** installing help indices ** building package indices Loading required package: Matrix ** installing vignettes ** testing if installed package can be loaded * DONE (Matrix) begin installing recommended package nlme Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'nlme' ... ** package 'nlme' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpXE9gJQ/R.INSTALL29ae590c182b/nlme/src' gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chol.f -o chol.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c corStruct.c -o corStruct.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c gnls.c -o gnls.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c matrix.c -o matrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c nlOptimizer.c -o nlOptimizer.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c nlme.c -o nlme.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c nlmefit.c -o nlmefit.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fvisibility=hidden -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pdMat.c -o pdMat.o gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rs.f -o rs.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o rs.o -lgfortran -lm -lquadmath -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpXE9gJQ/R.INSTALL29ae590c182b/nlme/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/nlme/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nlme) begin installing recommended package survival Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'survival' ... ** package 'survival' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpUoVvET/R.INSTALL2a2413de105/survival/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agexact.c -o agexact.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agfit4.c -o agfit4.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agfit5.c -o agfit5.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agmart.c -o agmart.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agmart2.c -o agmart2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agmart3.c -o agmart3.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agscore.c -o agscore.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agsurv3.c -o agsurv3.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agsurv4.c -o agsurv4.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c agsurv5.c -o agsurv5.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chinv2.c -o chinv2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chinv3.c -o chinv3.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cholesky2.c -o cholesky2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cholesky3.c -o cholesky3.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chsolve2.c -o chsolve2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c chsolve3.c -o chsolve3.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c concordance1.c -o concordance1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cox_Rcallback.c -o cox_Rcallback.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxcount1.c -o coxcount1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxdetail.c -o coxdetail.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxexact.c -o coxexact.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxfit5.c -o coxfit5.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxfit6.c -o coxfit6.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxmart.c -o coxmart.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxmart2.c -o coxmart2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxph_wtest.c -o coxph_wtest.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxsafe.c -o coxsafe.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxscho.c -o coxscho.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxscore.c -o coxscore.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dmatrix.c -o dmatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c doloop.c -o doloop.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c finegray.c -o finegray.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pyears1.c -o pyears1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pyears2.c -o pyears2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pyears3b.c -o pyears3b.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pystep.c -o pystep.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survConcordance.c -o survConcordance.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survdiff2.c -o survdiff2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survfit4.c -o survfit4.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survfitci.c -o survfitci.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survpenal.c -o survpenal.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survreg6.c -o survreg6.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survreg7.c -o survreg7.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survregc1.c -o survregc1.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survregc2.c -o survregc2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c survsplit.c -o survsplit.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c tmerge.c -o tmerge.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o survival.so agexact.o agfit4.o agfit5.o agmart.o agmart2.o agmart3.o agscore.o agsurv3.o agsurv4.o agsurv5.o chinv2.o chinv3.o cholesky2.o cholesky3.o chsolve2.o chsolve3.o concordance1.o cox_Rcallback.o coxcount1.o coxdetail.o coxexact.o coxfit5.o coxfit6.o coxmart.o coxmart2.o coxph_wtest.o coxsafe.o coxscho.o coxscore.o dmatrix.o doloop.o finegray.o init.o pyears1.o pyears2.o pyears3b.o pystep.o survConcordance.o survdiff2.o survfit4.o survfitci.o survpenal.o survreg6.o survreg7.o survregc1.o survregc2.o survsplit.o tmerge.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpUoVvET/R.INSTALL2a2413de105/survival/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/survival/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (survival) begin installing recommended package boot Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'boot' ... ** package 'boot' successfully unpacked and MD5 sums checked ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (boot) begin installing recommended package cluster Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'cluster' ... ** package 'cluster' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpJVTnJ7/R.INSTALL2bc735f1756c/cluster/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c clara.c -o clara.o gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c daisy.f -o daisy.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dysta.f -o dysta.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c fanny.c -o fanny.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c mona.c -o mona.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pam.c -o pam.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sildist.c -o sildist.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c spannel.c -o spannel.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c twins.c -o twins.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o cluster.so clara.o daisy.o dysta.o fanny.o init.o mona.o pam.o sildist.o spannel.o twins.o -lgfortran -lm -lquadmath -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpJVTnJ7/R.INSTALL2bc735f1756c/cluster/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/cluster/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (cluster) begin installing recommended package codetools Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'codetools' ... ** package 'codetools' successfully unpacked and MD5 sums checked ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (codetools) begin installing recommended package foreign Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'foreign' ... ** package 'foreign' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpPhhmiw/R.INSTALL2c0f10e7663c/foreign/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c R_systat.c -o R_systat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c Rdbfread.c -o Rdbfread.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c Rdbfwrite.c -o Rdbfwrite.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c SASxport.c -o SASxport.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c avl.c -o avl.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dbfopen.c -o dbfopen.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c file-handle.c -o file-handle.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c format.c -o format.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c minitab.c -o minitab.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pfm-read.c -o pfm-read.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sfm-read.c -o sfm-read.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c spss.c -o spss.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c stataread.c -o stataread.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o foreign.so R_systat.o Rdbfread.o Rdbfwrite.o SASxport.o avl.o dbfopen.o file-handle.o format.o init.o minitab.o pfm-read.o sfm-read.o spss.o stataread.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpPhhmiw/R.INSTALL2c0f10e7663c/foreign/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/foreign/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (foreign) begin installing recommended package KernSmooth Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'KernSmooth' ... ** package 'KernSmooth' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpqHRL2C/R.INSTALL2c5639de59fc/KernSmooth/src' gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c blkest.f -o blkest.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c cp.f -o cp.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgedi.f -o dgedi.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgefa.f -o dgefa.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c dgesl.f -o dgesl.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c linbin.f -o linbin.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c linbin2D.f -o linbin2D.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c locpoly.f -o locpoly.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rlbin.f -o rlbin.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sdiag.f -o sdiag.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran gfortran -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sstdiag.f -o sstdiag.o f951: Warning: command line option '-Wformat=1' is valid for C/C++/ObjC/ObjC++ but not for Fortran x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o KernSmooth.so blkest.o cp.o dgedi.o dgefa.o dgesl.o init.o linbin.o linbin2D.o locpoly.o rlbin.o sdiag.o sstdiag.o -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpqHRL2C/R.INSTALL2c5639de59fc/KernSmooth/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/KernSmooth/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (KernSmooth) begin installing recommended package rpart Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'rpart' ... ** package 'rpart' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpRxlMJk/R.INSTALL2c8f4d5f81a3/rpart/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c anova.c -o anova.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c anovapred.c -o anovapred.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c branch.c -o branch.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c bsplit.c -o bsplit.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c choose_surg.c -o choose_surg.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c fix_cp.c -o fix_cp.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c free_tree.c -o free_tree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c gini.c -o gini.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c graycode.c -o graycode.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c insert_split.c -o insert_split.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c make_cp_list.c -o make_cp_list.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c make_cp_table.c -o make_cp_table.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c mysort.c -o mysort.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c nodesplit.c -o nodesplit.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c partition.c -o partition.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c poisson.c -o poisson.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pred_rpart.c -o pred_rpart.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c print_tree.c -o print_tree.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpart.c -o rpart.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpart_callback.c -o rpart_callback.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpartexp.c -o rpartexp.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpartexp2.c -o rpartexp2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpcountup.c -o rpcountup.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rpmatrix.c -o rpmatrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rundown.c -o rundown.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c rundown2.c -o rundown2.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c surrogate.c -o surrogate.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c usersplit.c -o usersplit.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c xpred.c -o xpred.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c xval.c -o xval.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o rpart.so anova.o anovapred.o branch.o bsplit.o choose_surg.o fix_cp.o free_tree.o gini.o graycode.o init.o insert_split.o make_cp_list.o make_cp_table.o mysort.o nodesplit.o partition.o poisson.o pred_rpart.o print_tree.o rpart.o rpart_callback.o rpartexp.o rpartexp2.o rpcountup.o rpmatrix.o rundown.o rundown2.o surrogate.o usersplit.o xpred.o xval.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpRxlMJk/R.INSTALL2c8f4d5f81a3/rpart/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/rpart/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded * DONE (rpart) begin installing recommended package class Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'class' ... ** package 'class' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpNyBJ4x/R.INSTALL2d0744f402e2/class/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c class.c -o class.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o class.so class.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpNyBJ4x/R.INSTALL2d0744f402e2/class/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/class/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (class) begin installing recommended package nnet Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'nnet' ... ** package 'nnet' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/Rtmpzy90bB/R.INSTALL2d1f1ede068c/nnet/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c nnet.c -o nnet.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o nnet.so nnet.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/Rtmpzy90bB/R.INSTALL2d1f1ede068c/nnet/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/nnet/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (nnet) begin installing recommended package spatial Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'spatial' ... ** package 'spatial' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpBNSvAb/R.INSTALL2d377032b5a9/spatial/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c krc.c -o krc.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c pps.c -o pps.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o spatial.so init.o krc.o pps.o -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpBNSvAb/R.INSTALL2d377032b5a9/spatial/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/spatial/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (spatial) begin installing recommended package mgcv Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : system timezone name is unknown: set environment variable TZ * installing *source* package 'mgcv' ... ** package 'mgcv' successfully unpacked and MD5 sums checked ** libs make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpdCP5cE/R.INSTALL2d5d7e8509ca/mgcv/src' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c coxph.c -o coxph.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c discrete.c -o discrete.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c gdi.c -o gdi.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c init.c -o init.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c magic.c -o magic.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c mat.c -o mat.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c matrix.c -o matrix.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c mgcv.c -o mgcv.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c misc.c -o misc.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c mvn.c -o mvn.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c qp.c -o qp.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c soap.c -o soap.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c sparse-smooth.c -o sparse-smooth.o x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c tprs.c -o tprs.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o mgcv.so coxph.o discrete.o gdi.o init.o magic.o mat.o matrix.o mgcv.o misc.o mvn.o qp.o soap.o sparse-smooth.o tprs.o -llapack -lblas -lgfortran -lm -lquadmath -fopenmp -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/RtmpdCP5cE/R.INSTALL2d5d7e8509ca/mgcv/src' installing to /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/mgcv/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (mgcv) make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/Recommended' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/Recommended' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' building/updating vignettes for package 'grid' ... building/updating vignettes for package 'parallel' ... building/updating vignettes for package 'utils' ... make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build' configuring Java ... Java interpreter : /usr/bin/java Java version : 1.8.0_121 Java home path : /usr/lib64/jvm/icedtea8-3.3.0/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar trying to compile and link a JNI program detected JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux detected JNI linker flags : -L$(JAVA_HOME)/lib/amd64 -ljvm make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/tmp/Rjavareconf.n1Gvvm' x86_64-tld-linux-gcc -I/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/include -DNDEBUG -I/usr/lib64/jvm/icedtea8-3.3.0/jre/../include -I/usr/lib64/jvm/icedtea8-3.3.0/jre/../include/linux -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c conftest.c -o conftest.o x86_64-tld-linux-gcc -shared -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o conftest.so conftest.o -L/usr/lib64/jvm/icedtea8-3.3.0/jre/lib/amd64 -ljvm -L/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib -lR make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/tmp/Rjavareconf.n1Gvvm' JAVA_HOME : /usr/lib64/jvm/icedtea8-3.3.0/jre Java library path: $(JAVA_HOME)/lib/amd64 JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux JNI linker flags : -L$(JAVA_HOME)/lib/amd64 -ljvm Updating Java configuration in /tmp/B.Qb_jAP/BUILD/R-3.4.3/build Done. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build' + /usr/bin/make -j8 docs pdf info make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' creating doc/manual/version.tex /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-FAQ.texi creating doc/manual/version.texi make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[2]: Nothing to be done for 'R'. make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' collecting LaTeX docs for package 'grDevices' ... /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-admin.texi collecting LaTeX docs for package 'utils' ... collecting LaTeX docs for package 'graphics' ... make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' collecting LaTeX docs for package 'tools' ... make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' collecting LaTeX docs for package 'base' ... make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' creating src/scripts/R.fe make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' make[3]: Nothing to be done for 'R'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: 'Makedeps' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[4]: 'libtre.a' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: 'Makedeps' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[4]: 'libtz.a' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tzone' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[3]: 'libappl.a' is up to date. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[3]: 'libnmath.a' is up to date. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX config.status: creating src/unix/Makefile make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[3]: 'libunix.a' is up to date. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -DR_HOME='"/tmp/B.Qb_jAP/BUILD/R-3.4.3/build"' \ -o Rscript ../../.././src/unix/Rscript.c Warning in as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ .make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' .....config.status: creating src/main/Makefile ..make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/serialize.c -o serialize.o ...../usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-data.texi ... ...collecting LaTeX docs for package 'stats' ... . ..Converting parsed Rd's to LaTeX ...collecting LaTeX docs for package 'datasets' ... x86_64-tld-linux-gcc -I../../.././src/extra -I. -I../../src/include -I../../.././src/include -I../../.././src/nmath -DHAVE_CONFIG_H -fopenmp -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../.././src/main/version.c -o version.o ...x86_64-tld-linux-gcc -shared -fopenmp -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o libR.so CommandLineArgs.o Rdynload.o Renviron.o RNG.o agrep.o apply.o arithmetic.o array.o attrib.o bind.o builtin.o character.o coerce.o colors.o complex.o connections.o context.o cum.o dcf.o datetime.o debug.o deparse.o devices.o dotcode.o dounzip.o dstruct.o duplicate.o edit.o engine.o envir.o errors.o eval.o format.o gevents.o gram.o gram-ex.o graphics.o grep.o identical.o inlined.o inspect.o internet.o iosupport.o lapack.o list.o localecharset.o logic.o main.o mapply.o match.o memory.o names.o objects.o options.o paste.o platform.o plot.o plot3d.o plotmath.o print.o printarray.o printvector.o printutils.o qsort.o radixsort.o random.o raw.o registration.o relop.o rlocale.o saveload.o scan.o seq.o serialize.o sort.o source.o split.o sprintf.o startup.o subassign.o subscript.o subset.o summary.o sysutils.o times.o unique.o util.o version.o g_alab_her.o g_cntrlify.o g_fontdb.o g_her_glyph.o xxxpr.o `ls ../unix/*.o ../appl/*.o ../nmath/*.o` ../extra/tre/libtre.a ../extra/tzone/libtz.a -lblas -lgfortran -lm -lquadmath -lreadline -lpcre -llzma -lbz2 -lz -lrt -ldl -lm -licuuc -licui18n /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-exts.texi Converting parsed Rd's to LaTeX /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-intro.texi ... ..make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/lib/libR.so is unchanged make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' .make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/bin/exec/R is unchanged make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[4]: 'internet.so' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[4]: 'lapack.so' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' .make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[4]: 'R_X11.so' is up to date. make[4]: 'R_de.so' is up to date. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/modules/R_X11.so is unchanged /tmp/B.Qb_jAP/BUILD/R-3.4.3/build/modules/R_de.so is unchanged make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' .make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/profile' building system startup profile make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/profile' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' building package 'translations' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/translations' .make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' building package 'base' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' .all.R is unchanged make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' building package 'tools' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' collecting LaTeX docs for package 'methods' ... all.R is unchanged make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' .make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' ../../../../library/tools/libs/tools.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' installing 'sysdata.rda' ..make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' ..Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' building package 'compiler' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' all.R is unchanged ...Converting parsed Rd's to LaTeX Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/compiler' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Nothing to be done for 'mklazycomp'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[3]: Nothing to be done for 'mklazycomp'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tools' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' building package 'utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' all.R is unchanged .Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Nothing to be done for 'iconvlist'. .make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' ../../../../library/utils/libs/utils.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' installing 'sysdata.rda' . .make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/utils' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' building package 'grDevices' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' all.R is unchanged .Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ collecting LaTeX docs for package 'grid' ... ...make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' collecting LaTeX docs for package 'splines' ... make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' x86_64-tld-linux-gcc -I../../../../include -DNDEBUG -I../../../include -I../../../../.././src/include -DHAVE_CONFIG_H -fpic -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -c ../../../../.././src/library/grDevices/src/devPS.c -o devPS.o Converting parsed Rd's to LaTeX ....Converting parsed Rd's to LaTeX ..... .......collecting LaTeX docs for package 'stats4' ... ......Converting parsed Rd's to LaTeX ..... . /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-ints.texi ...collecting LaTeX docs for package 'tcltk' ... collecting LaTeX docs for package 'compiler' ... ... Converting parsed Rd's to LaTeX .Converting parsed Rd's to LaTeX . collecting LaTeX docs for package 'MASS' ... ..collecting LaTeX docs for package 'parallel' ... .collecting LaTeX docs for package 'lattice' ... Converting parsed Rd's to LaTeX ..Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX ....... collecting LaTeX docs for package 'Matrix' ... .......Converting parsed Rd's to LaTeX ..x86_64-tld-linux-gcc -shared -L../../../../lib -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -o grDevices.so axis_scales.o chull.o devices.o init.o stubs.o colors.o devCairo.o devPicTeX.o devPS.o devQuartz.o -lz -L../../../../lib -lR /usr/bin/texi2any --enable-encoding -D UseExternalXrefs -I../../.././doc/manual ../../.././doc/manual/R-lang.texi .make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' ../../../../library/grDevices/libs/grDevices.so is unchanged make[7]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[8]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[9]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[9]: 'cairo.so' is up to date. make[9]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[8]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[7]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src/cairo' make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' ..make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' ..........make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grDevices' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' building package 'graphics' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' .all.R is unchanged ..Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ .make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' ../../../../library/graphics/libs/graphics.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/graphics' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' building package 'stats' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' ..all.R is unchanged .Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ ...make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' .make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' ../../../../library/stats/libs/stats.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' building package 'datasets' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' ...Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' collecting LaTeX docs for package 'nlme' ... .. ...collecting LaTeX docs for package 'survival' ... Converting parsed Rd's to LaTeX ...Converting parsed Rd's to LaTeX ..collecting LaTeX docs for package 'boot' ... .Error: package or namespace load failed for 'datasets' in gzfile(file, "rb"): cannot open the connection .make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' collecting LaTeX docs for package 'cluster' ... ...Error: package or namespace load failed for 'datasets' in gzfile(file, "rb"): cannot open the connection .During startup - Warning messages: 1: In gzfile(file, "rb") : cannot open compressed file '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/datasets/data/Rdata.rdx', probable reason 'No such file or directory' 2: package 'datasets' in options("defaultPackages") was not found Converting parsed Rd's to LaTeX ....During startup - Warning messages: 1: In gzfile(file, "rb") : cannot open compressed file '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/library/datasets/data/Rdata.rdx', probable reason 'No such file or directory' 2: package 'datasets' in options("defaultPackages") was not found Converting parsed Rd's to LaTeX ...make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/datasets' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' building package 'methods' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' all.R is unchanged ...collecting LaTeX docs for package 'codetools' ... .Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' ../../../../library/methods/libs/methods.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[4]: Nothing to be done for 'RfilesLazy'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/methods' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' .building package 'grid' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' all.R is unchanged ....Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' ..make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' ../../../../library/grid/libs/grid.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/grid' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' building package 'splines' .make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' all.R is unchanged ..Converting parsed Rd's to LaTeX ..Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' ../../../../library/splines/libs/splines.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/splines' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' building package 'stats4' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' all.R is unchanged . .collecting LaTeX docs for package 'foreign' ... Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ .make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/stats4' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' building package 'tcltk' all.R is unchanged .make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' ...Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ ..make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' .make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' .../../../../library/tcltk/libs/tcltk.so is unchanged make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk/src' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/tcltk' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' building package 'parallel' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' all.R is unchanged Converting parsed Rd's to LaTeX ... Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ .make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' .make[5]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' make[6]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' ../../../../library/parallel/libs/parallel.so is unchanged make[6]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' make[5]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel/src' make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[4]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[4]: Nothing to be done for 'mklazycomp'. make[4]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/parallel' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' collecting LaTeX docs for package 'KernSmooth' ... collecting LaTeX docs for package 'rpart' ... ..Warning message: In as.POSIXlt.POSIXct(x, tz) : system timezone name is unknown: set environment variable TZ .make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library/base' . .collecting LaTeX docs for package 'class' ... installing parsed NAMESPACE files collecting LaTeX docs for package 'nnet' ... ..Error: package or namespace load failed for 'stats' in readRDS(nsInfoFilePath): error reading from connection During startup - Warning message: package 'stats' in options("defaultPackages") was not found Converting parsed Rd's to LaTeX collecting LaTeX docs for package 'spatial' ... Converting parsed Rd's to LaTeX make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tests' make[1]: Nothing to be done for 'R'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tests' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' creating doc/manual/R-admin.html .Converting parsed Rd's to LaTeX Converting parsed Rd's to LaTeX .. collecting LaTeX docs for package 'mgcv' ... .Converting parsed Rd's to LaTeX . TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-FAQ.texi . .TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-admin.texi creating doc/manual/R-data.html . TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-data.texi Converting parsed Rd's to LaTeX .. TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-exts.texi This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. .entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: pdf, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/usr/share/texmf-dist/tex/texinfo/txi-en.tex) [1{/usr/share/texmf/fonts/map/pd ftex/updmap/pdftex.map}] [-1] Chapter 1 Cross reference values unknown; you must run TeX again. Chapter 2 [1] [2] [3] [4] [5] Underfull \hbox (badness 3158) in paragraph at lines 528--541 []@textrm Debian pack-ages, main-tained by Dirk Ed-del-buet-tel, have long been part of Underfull \hbox (badness 3769) in paragraph at lines 562--564 []@textrm See [][]@texttt https://CRAN.R-project.org/bin/linux/suse/README.html [][][] @textrm for in-for-ma-tion [6This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ] Underfull \hbox (badness 10000) in paragraph at lines 624--627 []@textrm John M. Cham-bers (2008), ``Soft-ware for Data Anal-y-sis: Pro- Underfull \hbox (badness 8132) in paragraph at lines 624--627 @textrm gram-ming with R''. Springer, New York, ISBN 978-0-387-75935-7, Underfull \hbox (badness 10000) in paragraph at lines 632--635 []@textrm Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat-ics'' . Underfull \hbox (badness 7379) in paragraph at lines 632--635 @textrm Chap-man & Hall/CRC, Boca Ra-ton, FL, ISBN 978-1-420-06367-7, Underfull \hbox (badness 2846) in paragraph at lines 651--654 []@textrm William N. Ven-ables and Brian D. Rip-ley (2002), ``Mod-ern Ap-plied Underfull \hbox (badness 10000) in paragraph at lines 651--654 @textrm Statis-tics with S'' (4th edi-tion). Springer, ISBN 0-387-95457-0, [7] [8]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi Overfull \hbox (59.99986pt too wide) in paragraph at lines 787--792 @textrm and is mir-rored daily to many sites around the world. See [][]@texttt https://CRAN.R-project.org/mirrors.html[][][] [9 (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: pdf,] fonts, Chapter 3 [10] page headings, tables, [11 conditionals, indexing, sectioning,] toc, environments, [12 defuns, macros,] cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex [13 This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] formatting, [14 and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [15 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] [16] [17] Overfull \hbox (11.28497pt too wide) in paragraph at lines 1521--1524 []@textrm See also [][]@texttt https://en.wikipedia.org/wiki/R_programming_lang uage#Commercialized_ Chapter 4 [18] [19] Chapter 5 [20] [21] [22]} [23] [2]] [-1] Chapter 1 [24] Chapter 6 [25 Underfull \hbox (badness 10000) in paragraph at lines 152--157 []@textrm The tar-balls are avail-able from [][]@texttt https://stat.ethz.ch/R/ daily[][][]@textrm . Down-load Underfull \hbox (badness 4303) in paragraph at lines 180--186 @textrm to check out `@texttt r-devel[]@textrm '[] into di-rec-tory @textsl pat h @textrm (which will be cre-ated if nec-es-sary). Underfull \hbox (badness 2181) in paragraph at lines 180--186 @textrm The al-pha, beta and RC ver-sions of an up-com-ing @textsl x.y.0 @textr m re-lease are avail-able from [1]] Chapter 2 [2 [26]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ] Chapter 7 [27] Cross reference values unknown; you must run TeX again. [28 [3]] [29entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:] pdf, [4 fonts,] [30] [5 [31 page headings, tables,] conditionals, indexing,] sectioning, toc, environments, defuns, [6 macros, cross references, [32 insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex] This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] [7 formatting, and turning on texinfo input format.)] [33 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)] [8) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [34 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map]] Underfull \hbox (badness 2932) in paragraph at lines 831--841 []@textrm When sub-architectures are used the ver-sion of @texttt Rscript[] @te xtrm in e.g. `@texttt /usr/bin[]@textrm '[] will Underfull \hbox (badness 6775) in paragraph at lines 831--841 @textrm be the last in-stalled, but architecture-specific ver-sions will be ava il-able in e.g. [9 [35]] Underfull \hbox (badness 10000) in paragraph at lines 923--928 []@textrm One that may be use-ful when work-ing on R it-self is the op-tion Underfull \hbox (badness 10000) in paragraph at lines 923--928 @textrm `@texttt --disable-byte-compiled-packages[]@textrm '[], which en-sures that the base and rec-om- [10 [36]] [11] [37 Chapter 3 [12]] [38] [13 [39]] Underfull \hbox (badness 7685) in paragraph at lines 1285--1289 []@textrm or per-haps bet-ter, set the en-vi-ron-ment vari-able @texttt TAR_OP TIONS[] @textrm to the value [14] Underfull \hbox (badness 10000) in paragraph at lines 1417--1423 @textrm ics li-braries built by Si-mon Ur-banek at [][]@texttt https://www.rfor ge.net/Cairo/files/ Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm The first should be un-com-mented and the sec-ond set to the top-level di- Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm rec-tory of a suit-ably pack-aged bi-nary build of ICU, for ex-am-ple t hat at Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 [][]@texttt https://www.stats.ox.ac.uk/pub/Rtools/goodies/ICU_531.zip[][][]@tex trm . De-pend-ing on [15 [40]}]] [2] [-1] (Acknowledgements) [41 Underfull \hbox (badness 2582) in paragraph at lines 1502--1506 []@textrm Parallel check-ing of pack-age sources (part of @texttt make check-de vel[] @textrm and @texttt make check- Underfull \hbox (badness 10000) in paragraph at lines 1539--1541 [][][]@smallrm Suitable dis-tri-bu-tions in-clude Straw-berry Perl, [][]@smallt t http://strawberryperl.com/[][][] @smallrm and Ac-tivePerl, [16]] Underfull \hbox (badness 6559) in paragraph at lines 3385--3393 []@textrm When R trans-fers files over @reducedrm HTTP @textrm (e.g., us-ing th e @texttt install.packages()[] @textrm or Underfull \hbox (badness 10000) in paragraph at lines 3385--3393 @texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas ed on the Underfull \hbox (badness 3364) in paragraph at lines 3385--3393 @textrm `@texttt download.file.method[]@textrm '[] op-tion. There are sev-eral meth-ods avail-able and the [42 [17 Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88 [][]@textbf dataframes2xls[][]| Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98 [][]@textbf RPostgreSQL[][]| Chapter 1 [1]]] Chapter 8 [43] Chapter 4 [18 Cross reference values unknown; you must run TeX again.] Chapter 9 [44 [2]] Underfull \hbox (badness 10000) in paragraph at lines 1755--1759 []@textrm Installers for R-patched and R-devel are usu-ally avail-able from Underfull \hbox (badness 3872) in paragraph at lines 1755--1759 [][]@texttt https://r.research.att.com[][][]@textrm . (Some of these pack-ages are un-signed: to in-stall Underfull \hbox (badness 10000) in paragraph at lines 1783--1788 []@textrm Various parts of the build re-quire XQuartz to be in-stalled: see Underfull \hbox (badness 3009) in paragraph at lines 1783--1788 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . These in-clude the @ textbf tcltk @textrm pack-age and the @texttt X11[] Underfull \hbox (badness 10000) in paragraph at lines 1835--1839 @texttt library/mac/releasenotes/MacOSX/WhatsNewInOSX/Articles/MacOSX10_9.html[ ][][]@textrm ) which [19 [45]] [3 Underfull \hbox (badness 10000) in paragraph at lines 3624--3632 [][]@texttt https://en.wikipedia.org/wiki/Reproducibility[][][]@textrm ) the pr ob-lem, prefer-ably the Chapter 10 [46] Underfull \hbox (badness 10000) in paragraph at lines 1851--1853 @textrm (see [][]@texttt https://developer.apple.com/library/mac/releasenotes/ MacOSX/ Underfull \hbox (badness 3668) in paragraph at lines 1880--1892 []@textrm The in-stal-la-tion con-sists of up to four Ap-ple pack-ages:$[]$ @te xttt org.r-project.R.el- Underfull \hbox (badness 10000) in paragraph at lines 1880--1892 @texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@ textrm , @texttt org.r-project.x86_ [20] [47]] Chapter 5 [21 [48] [4] ) (see the transcript file for additional information)] [6< /usr/share/texmf-dist/fonts/type1/bluesky/cm/cmmi7.pfb]> [7 [8< /usr/share/texmf-dist/fonts/type1/bluesky/cm/cmti10.pfb] [9> [26.] [27 [28This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. Output written on R-FAQ.pdf (50 pages, 334197 bytes). Transcript written on R-FAQ.log. [12]] Underfull \hbox (badness 2088) in paragraph at lines 1104--1112 []@textrm Octave is a nu-mer-i-cal lin-ear al-ge-bra sys-tem ([][]@texttt http: //www.octave.org[][][]@textrm ), and func-tion Chapter 4 [13] Underfull \hbox (badness 3907) in paragraph at lines 2615--2623 []@textrm Utilities such as @texttt install.packages[] @textrm can be pointed a t any @reducedrm CRAN@textrm -style repos-i-tory, Underfull \hbox (badness 2158) in paragraph at lines 2615--2623 @textrm such as [][]@texttt http://www.stats.ox.ac.uk/pub/RWin[][][]@textrm : t his must be an URL scheme that [29] Underfull \hbox (badness 3058) in paragraph at lines 1196--1202 @textrm data-bases and even text files (pos-si-bly com-pressed). Open Data-base Con-nec-tiv-ity [14entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: Chapter 7 [30] pdf, fonts,] [31 [15]] [32] page headings, tables, conditionals, indexing, Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 []@textrm Package [][]@textbf RMongo[][] @textrm pro-vides an R in-ter-face to a Java client for `Mon-goDB' Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 @textrm ([][]@texttt https://en.wikipedia.org/wiki/MongoDB[][][]@textrm ) data- bases, which are queried us-ing [16 sectioning, [33 toc, environments,] defuns, macros,] cross references, insertions, Chapter 8 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex [34 This is `epsf.tex' v2.7.4 <14 February 2011> )] localization, Underfull \hbox (badness 3690) in paragraph at lines 1417--1421 []@textrm These are con-ve-nient in-ter-faces to read/write/test/delete ta-bles in the data-base. [17 formatting, and turning on texinfo input format.) Chapter 9 [35] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi [18) [36 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map]] Chapter 5 [37 [19]] Appendix A [38] Underfull \hbox (badness 3098) in paragraph at lines 1755--1761 @textrm to @reducedrm NASA@textrm 's HDF5 (Hi-er-ar-chi-cal Data For-mat, see [ ][]@texttt https://www.hdfgroup.org/HDF5/[][][]@textrm ) Underfull \hbox (badness 10000) in paragraph at lines 1755--1761 @textrm and to UCAR's netCDF data files (net-work Com-mon Data Form, see Underfull \hbox (badness 2111) in paragraph at lines 1781--1794 @textrm been adopted for the 'Xbase' fam-ily of data-bases, cov-er-ing dBase, C lip-per, Fox-Pro Underfull \hbox (badness 3098) in paragraph at lines 1781--1794 @textrm (see for ex-am-ple [][]@texttt http://www.digitalpreservation.gov/forma ts/fdd/fdd000325.shtml[][][] Chapter 6 [39 [20]] Chapter 7 [21] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3344--3344 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40 [22]] Underfull \hbox (badness 10000) in paragraph at lines 3465--3467 [][][]@smallrm also known as @smalltt ttf-mscorefonts-installer[] @smallrm in t he De-bian/Ubuntu world: see also Underfull \hbox (badness 2409) in paragraph at lines 3462--3480 @textrm avail-able at [][]@texttt https://fedorahosted.org/liberation-fonts/[][ ][]@textrm ,$[]$ which cover the Latin, [41 [23]] Underfull \hbox (badness 2150) in paragraph at lines 2094--2098 []@textrm A sum-mary of all the con-nec-tions cur-rently opened by the user can be found by [24 Underfull \hbox (badness 3078) in paragraph at lines 3530--3536 []@textrm The @texttt bitmap[] @textrm and @texttt dev2bitmap[] @textrm de-vice s and func-tion @texttt embedFonts()[] @textrm use ghost-script [42}]] [2]] [-1] (Acknowledgements) Chapter 8 Chapter 1 [25 [1] Cross reference values unknown; you must run TeX again.] [43 [2 Underfull \hbox (badness 3815) in paragraph at lines 2239--2241 []@textrm The ear-lier low-level in-ter-face is given by func-tions @texttt mak e.socket[]@textrm , @texttt read.socket[]@textrm , Chapter 9 [26]]] [44 Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3] Underfull \hbox (badness 2012) in paragraph at lines 2278--2287 []@textrm If you do not have Ex-cel, many other pro-grams are able to read such spread- Underfull \hbox (badness 7326) in paragraph at lines 2278--2287 @textrm sheets and ex-port in a text for-mat on both Win-dows and Unix, for ex- am- Underfull \hbox (badness 10000) in paragraph at lines 2278--2287 @textrm ple Gnu-meric ([][]@texttt http://www.gnome.org/projects/gnumeric/[][][ ]@textrm ) and OpenOf-fice Appendix A [27]] Overfull \hbox (38.37012pt too wide) in paragraph at lines 2363--2366 @textrm B. D. Rip-ley (2001) Con-nec-tions. @textit R News@textrm , @textbf 1/1 @textrm , 16--7. [][]@texttt https://www.r-project.org/doc/Rnews/Rnews_ (Function and variable index) [4 [28] [45 (Concept index) [29]]] [30] ) (see the transcript file for additional information)]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. [49 [8]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: [9 pdf, fonts, [50] Output written on R-data.pdf (33 pages, 235994 bytes). Transcript written on R-data.log. ] [10 [51 page headings, tables,]] conditionals, indexing,. sectioning, toc, environments, defuns, Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11 macros, Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 [][][]@smallrm The links there have proved dif-fi-cult to ac-cess, in which cas e ei-ther point an FTP Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 @smallrm client at [][]@smalltt ftp://www.eecs.harvard.edu/pub/nr/[][][] @small rm or grab the copy made avail-able at [52 cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex]] This is `epsf.tex' v2.7.4 <14 February 2011> ) Appendix C localization, [53] formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.aux [54 [12]] [55] [13 Underfull \hbox (badness 10000) in paragraph at lines 1--4782 []@textrm R has been built with Linux `@texttt ix86[]@textrm '[] and `@texttt x 86_64[]@textrm '[] C and C@texttt ++ @textrm com-pil-ers Underfull \hbox (badness 10000) in paragraph at lines 1--4782 @textrm ([][]@texttt http://clang.llvm.org[][][]@textrm ) based on the Clang fr ont-ends, in-voked by @texttt CC=clang [56]]) (/usr/share/texmf-dist/tex/texinfo/txi-en.tex [14) [57] [1{/usr/share/texmf/fonts/map/pd ftex/updmap/pdftex.map] [15 Underfull \hbox (badness 10000) in paragraph at lines 4877--4881 []@textrm An X sub-system is re-quired un-less con-fig-ur-ing us-ing `@texttt - -without-x[]@textrm '[]: see Underfull \hbox (badness 2221) in paragraph at lines 4877--4881 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . R's @texttt configur e[] @textrm script can be told to look for Underfull \hbox (badness 10000) in paragraph at lines 4921--4930 []@textrm There are in-stallers$[]$ for For-tran com-pil-ers for El Cap-i-tan a nd Sierra at [58]] Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 []@textrm More re-cent and com-plete dis-tri-bu-tions of @texttt clang[] @textr m are of-ten avail-able from Underfull \hbox (badness 5288) in paragraph at lines 4946--4955 [][]@texttt http://llvm.org/releases/[][][]@textrm : for ex-am-ple at the time of writ-ing of 5.0.0 built Underfull \hbox (badness 2065) in paragraph at lines 4946--4955 @textrm for Sierra or later. In par-tic-u-lar, these should in-clude sup-port f or OpenMP. An- Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 @textrm other build of clang 4.0.0 is avail-able at [][]@texttt https://r.resea rch.att.com/libs/ Overfull \hbox (56.55324pt too wide) in paragraph at lines 4957--4957 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr /lib/pkgconfig \[] Overfull \hbox (85.29668pt too wide) in paragraph at lines 4995--4995 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf ig:/usr/lib/pkgconfig[] [59 Underfull \hbox (badness 10000) in paragraph at lines 1432--1439 @textrm `@texttt RnavGraph/inst/tcl[]@textrm '[], `@texttt RProtoBuf/inst/pytho n[]@textrm '[] and `@texttt emdbook/inst/BUGS[]@textrm '[] and [16]] Underfull \hbox (badness 10000) in paragraph at lines 5029--5039 []@textrm The T[]X im-ple-men-ta-tion used by the de-vel-op-ers is Mac-TeX Underfull \hbox (badness 2600) in paragraph at lines 5029--5039 @textrm ([][]@texttt https://www.tug.org/mactex/[][][]@textrm ): the full in-st al-la-tion is about 5GB, but a smaller [60 [17]] [61 [18]] Underfull \hbox (badness 3428) in paragraph at lines 5273--5277 @textrm than other plat-forms. This makes it de-sir-able to build PCRE with the op-tion [62 [19]]. [63 [20]] [64 Underfull \hbox (badness 10000) in paragraph at lines 1852--1857 []@textrm [@texttt libRlapack[] @textrm in-cludes all the double-precision LA- PACK rou-tines which Underfull \hbox (badness 2875) in paragraph at lines 1852--1857 @textrm were cur-rent in 2003: a list of which rou-tines are in-cluded is in f ile [21}]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc] Underfull \hbox (badness 10000) in paragraph at lines 5478--5482 []@textrm Note that paths such as `@texttt /opt/csw/lib[]@textrm '[], `@texttt /usr/local/lib/amd64[]@textrm '[] and Underfull \hbox (badness 5050) in paragraph at lines 5478--5482 @textrm `@texttt /opt/csw/lib/amd64[]@textrm '[] may need to be in the []@textt t LD_LIBRARY_PATH[] @textrm dur-ing con-fig-u-ra- [65 [22]] [-1 Underfull \hbox (badness 10000) in paragraph at lines 2044--2046 [][][][][]@smalltt http://www.openmp.org/[][][]@smallrm , [][]@smalltt https:// en.wikipedia.org/wiki/OpenMP[][][]@smallrm , [][]@smalltt https://computing.lln l.gov/ [23 Underfull \hbox (badness 2111) in paragraph at lines 5579--5584 []@textrm The re-cent WU test-ing was done us-ing com-pil-ers from both the @re ducedrm GNU @textrm Com-piler [66]]] [24 [-2] Underfull \hbox (badness 4492) in paragraph at lines 5703--5712 @textrm PACK code to avoid com-pu-ta-tions en-tirely in extended-precision reg- is-ters, so file [67]] Appendix D Overfull \hbox (46.15797pt too wide) in paragraph at lines 2231--2231 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2233--2233 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [25 [68]]) [-3 [26 [69] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc])] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc [27] Underfull \hbox (badness 10000) in paragraph at lines 2482--2484 [][][]@smallrm The changes are linked from [][]@smalltt https://isocpp.org/std/ standing-documents/ [28) Chapter 1 Underfull \hbox (badness 5302) in paragraph at lines 5912--5915 []@textrm You may need to set the en-vi-ron-ment vari-able @texttt CYGWIN[] @te xtrm to a value in-clud-ing [70]] [29 (Function and variable index) [71 Chapter 2 [1This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ]] (Concept index) [72]] [2] (Environment variable index) [73] Overfull \hbox (39.30717pt too wide) in paragraph at lines 2605--2605 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] [30 [74] ) (see the transcript file for additional information) [3 Underfull \hbox (badness 10000) in paragraph at lines 2653--2659 [][][][][]@smalltt See https://isocpp.org/std/standing-documents/sd-6-sg10-feat ure-test-recommendations[][][] @smallrm or [31]] [4 pdf, [32] conditionals, Underfull \hbox (badness 3158) in paragraph at lines 528--541 []@textrm Debian pack-ages, main-tained by Dirk Ed-del-buet-tel, have long been part of Underfull \hbox (badness 3769) in paragraph at lines 562--564 []@textrm See [][]@texttt https://CRAN.R-project.org/bin/linux/suse/README.html [][][] @textrm for in-for-ma-tion [6 macros,] This is `epsf.tex' v2.7.4 <14 February 2011> )) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex) Underfull \hbox (badness 2809) in paragraph at lines 3132--3138 @textrm (or set the en-vi-ron-ment vari-able @texttt _R_BUILD_KEEP_EMPTY_DIRS_[ ] @textrm to `@texttt TRUE[]@textrm '[], or have a [36]]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) Chapter 3 [10 Output written on R-admin.pdf (77 pages, 460788 bytes). Transcript written on R-admin.log. [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] [37] [11] [38 [12]] [13] Underfull \hbox (badness 4556) in paragraph at lines 3369--3377 @textrm Others you may see are @texttt \VignettePackage[] @textrm (cur-rently i g-nored), @texttt \VignetteDepends[] Underfull \hbox (badness 2617) in paragraph at lines 3369--3377 @textrm pack-age in-stal-la-tion time to cre-ate the saved data frame `@texttt Meta/vignette.rds[]@textrm '[], but Underfull \hbox (badness 3579) in paragraph at lines 3369--3377 @textrm The @texttt \VignetteEngine[] @textrm state-ment is de-scribed in [][]$ @textsy h$@textrm un-de-fined$@textsy i$ @textrm [Non-Sweave vi-gnettes], [39 [14]] [15 [40] [16]] [17 [41]] Overfull \hbox (11.28497pt too wide) in paragraph at lines 1521--1524 []@textrm See also [][]@texttt https://en.wikipedia.org/wiki/R_programming_lang uage#Commercialized_ Chapter 4 [18] [42 [19]}]] [2 [43] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc Chapter 5 [20]] [44 [-1]] [21) [-2]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc) [45 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc]) (Acknowledgements) [22] [46 [23] Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88 [][]@textbf dataframes2xls[][]| Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98 [][]@textbf RPostgreSQL[][]| Chapter 1 [1]] [24 [47]] Chapter 6 [25] [2 [48] [26]] Chapter 7 [27 [3 [49]]] [4 [28]] [50 [29]] Chapter 2 [5 Overfull \hbox (32.24495pt too wide) in paragraph at lines 4536--4536 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4538--4538 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4539--4539 [] @texttt if(jvn < 1.8) stop("Java 8 is needed for this package but not avai lable")[] [51] [30]] [6 [52 [31]]] [7] [53 [32]] [8 [54] [33]] [9 [55] [34]] [10] Underfull \hbox (badness 3826) in paragraph at lines 4914--4917 []@textrm Some (but not all) ex-ten-sions are listed at [][]@texttt https://gc c.gnu.org/onlinedocs/ Underfull \hbox (badness 10000) in paragraph at lines 4914--4917 @texttt gcc/C-Extensions.html[][][] @textrm and [][]@texttt https://gcc.gnu.or g/onlinedocs/gcc/C_002b_ [56 Chapter 3 [11]] [35This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ] [57 [36]] [12 [58] [37] Underfull \hbox (badness 2088) in paragraph at lines 1104--1112 []@textrm Octave is a nu-mer-i-cal lin-ear al-ge-bra sys-tem ([][]@texttt http: //www.octave.org[][][]@textrm ), and func-tion Chapter 4 [13]] [59entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:] pdf, fonts, Underfull \hbox (badness 3058) in paragraph at lines 1196--1202 @textrm data-bases and even text files (pos-si-bly com-pressed). Open Data-base Con-nec-tiv-ity [14 [38] [60]] [15 [39]] page headings, tables, conditionals, [61 indexing, sectioning, toc,] environments, defuns, macros, cross references, insertions, [40 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 []@textrm Package [][]@textbf RMongo[][] @textrm pro-vides an R in-ter-face to a Java client for `Mon-goDB' Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 @textrm ([][]@texttt https://en.wikipedia.org/wiki/MongoDB[][][]@textrm ) data- bases, which are queried us-ing [16 [62. This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,]]] Chapter 2 formatting, [63 and turning on texinfo input format.)] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.aux [41 [64] Underfull \hbox (badness 3690) in paragraph at lines 1417--1421 []@textrm These are con-ve-nient in-ter-faces to read/write/test/delete ta-bles in the data-base. [17]] Underfull \hbox (badness 6559) in paragraph at lines 3385--3393 []@textrm When R trans-fers files over @reducedrm HTTP @textrm (e.g., us-ing th e @texttt install.packages()[] @textrm or Underfull \hbox (badness 10000) in paragraph at lines 3385--3393 @texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas ed on the Underfull \hbox (badness 3364) in paragraph at lines 3385--3393 @textrm `@texttt download.file.method[]@textrm '[] op-tion. There are sev-eral meth-ods avail-able and the [42 [65] Chapter 8 [43] [18.]] [66 Chapter 5 [19 Chapter 9] [44]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)] [67] [45) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] Underfull \hbox (badness 3098) in paragraph at lines 1755--1761 @textrm to @reducedrm NASA@textrm 's HDF5 (Hi-er-ar-chi-cal Data For-mat, see [ ][]@texttt https://www.hdfgroup.org/HDF5/[][][]@textrm ) Underfull \hbox (badness 10000) in paragraph at lines 1755--1761 @textrm and to UCAR's netCDF data files (net-work Com-mon Data Form, see Underfull \hbox (badness 2111) in paragraph at lines 1781--1794 @textrm been adopted for the 'Xbase' fam-ily of data-bases, cov-er-ing dBase, C lip-per, Fox-Pro Underfull \hbox (badness 3098) in paragraph at lines 1781--1794 @textrm (see for ex-am-ple [][]@texttt http://www.digitalpreservation.gov/forma ts/fdd/fdd000325.shtml[][][] Chapter 6 [20 [68 Underfull \hbox (badness 10000) in paragraph at lines 3624--3632 [][]@texttt https://en.wikipedia.org/wiki/Reproducibility[][][]@textrm ) the pr ob-lem, prefer-ably the Chapter 10] [46]] [47] [48] [69 Chapter 7 [21 ) (see the transcript file for additional information) [70< /usr/share/texmf-dist/fonts/type1/bluesky/cm/cmmi7.pfb Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71> [23 Underfull \hbox (badness 2150) in paragraph at lines 2094--2098 []@textrm A sum-mary of all the con-nec-tions cur-rently opened by the user can be found by [24]]< /usr/share/texmf-dist/fonts/type1/bluesky/cm/cmti10.pfb]> [73 Underfull \hbox (badness 3815) in paragraph at lines 2239--2241 []@textrm The ear-lier low-level in-ter-face is given by func-tions @texttt mak e.socket[]@textrm , @texttt read.socket[]@textrm , Chapter 9 [26}] [2 [74] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc] Underfull \hbox (badness 2012) in paragraph at lines 2278--2287 []@textrm If you do not have Ex-cel, many other pro-grams are able to read such spread- Underfull \hbox (badness 7326) in paragraph at lines 2278--2287 @textrm sheets and ex-port in a text for-mat on both Win-dows and Unix, for ex- am- Underfull \hbox (badness 10000) in paragraph at lines 2278--2287 @textrm ple Gnu-meric ([][]@texttt http://www.gnome.org/projects/gnumeric/[][][ ]@textrm ) and OpenOf-fice Appendix A [27 Output written on R-FAQ.pdf (52 pages, 386604 bytes). Transcript written on R-FAQ.log. ] Overfull \hbox (38.37012pt too wide) in paragraph at lines 2363--2366 @textrm B. D. Rip-ley (2001) Con-nec-tions. @textit R News@textrm , @textbf 1/1 @textrm , 16--7. [][]@texttt https://www.r-project.org/doc/Rnews/Rnews_ (Function and variable index) Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75 [28 [-1] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.vrs]] [76] [-2 [29] Underfull \hbox (badness 10000) in paragraph at lines 6762--6768 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text @textrm part of [77]]) [-3)] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc (Concept index) [30 [78) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.cps]) Chapter 1 Underfull \hbox (badness 10000) in paragraph at lines 6904--6908 []@textrm As of R ver-sion 3.2.0, a num-ber of macros are de-fined in the file Underfull \hbox (badness 4686) in paragraph at lines 6904--6908 @textrm `@texttt share/Rd/macros/system.Rd[]@textrm '[] of the R source or home di-rec-tory, and these will [79) [31] Underfull \hbox (badness 10000) in paragraph at lines 152--157 []@textrm The tar-balls are avail-able from [][]@texttt https://stat.ethz.ch/R/ daily[][][]@textrm . Down-load Underfull \hbox (badness 4303) in paragraph at lines 180--186 @textrm to check out `@texttt r-devel[]@textrm '[] into di-rec-tory @textsl pat h @textrm (which will be cre-ated if nec-es-sary). Underfull \hbox (badness 2181) in paragraph at lines 180--186 @textrm The al-pha, beta and RC ver-sions of an up-com-ing @textsl x.y.0 @textr m re-lease are avail-able from [1] ) (see the transcript file for additional information)< [80/usr/share/texmf-dist/font s/type1/bluesky/cm/cmb10.pfb] Chapter 2 [2>]]] [5]]] [87] [7 [88 Output written on R-data.pdf (35 pages, 302981 bytes). Transcript written on R-data.log. ]] Overfull \hbox (310.88272pt too wide) in paragraph at lines 7675--7680 [][]@texttt https://developer.apple.com/library/mac/#documentation/DeveloperToo ls/Conceptual/InstrumentsUserGuide/Introduction/Introduction.html[][][]@textrm ). Chapter 4 [89] [8 [90]] [91] Underfull \hbox (badness 2932) in paragraph at lines 831--841 []@textrm When sub-architectures are used the ver-sion of @texttt Rscript[] @te xtrm in e.g. `@texttt /usr/bin[]@textrm '[] will Underfull \hbox (badness 6775) in paragraph at lines 831--841 @textrm be the last in-stalled, but architecture-specific ver-sions will be ava il-able in e.g. [9 [92]] Underfull \hbox (badness 10000) in paragraph at lines 923--928 []@textrm One that may be use-ful when work-ing on R it-self is the op-tion Underfull \hbox (badness 10000) in paragraph at lines 923--928 @textrm `@texttt --disable-byte-compiled-packages[]@textrm '[], which en-sures that the base and rec-om- [10 [93]] [11 Underfull \hbox (badness 10000) in paragraph at lines 8057--8066 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [94]] Chapter 3 [12 [95]] [96 [13]] Underfull \hbox (badness 7685) in paragraph at lines 1285--1289 []@textrm or per-haps bet-ter, set the en-vi-ron-ment vari-able @texttt TAR_OP TIONS[] @textrm to the value [14 Underfull \hbox (badness 10000) in paragraph at lines 8282--8288 []@texttt valgrind[] @textrm is good at spot-ting the use of unini-tial-ized va l-ues: use op-tion Underfull \hbox (badness 10000) in paragraph at lines 8321--8331 @textrm See [][]@texttt http://clang.llvm.org/docs/UsersManual.html#controlling -code-generation[][][]@textrm , Overfull \hbox (39.30319pt too wide) in paragraph at lines 8335--8336 [][][]@smallrm see [][]@smalltt http://llvm.org/devmtg/2014-04/PDFs/LightningTa lks/EuroLLVM%202014%20--%20container%20overflow.pdf[][][]@smallrm .| [97]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ] Underfull \hbox (badness 10000) in paragraph at lines 1417--1423 @textrm ics li-braries built by Si-mon Ur-banek at [][]@texttt https://www.rfor ge.net/Cairo/files/ Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm The first should be un-com-mented and the sec-ond set to the top-level di- Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm rec-tory of a suit-ably pack-aged bi-nary build of ICU, for ex-am-ple t hat at Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 [][]@texttt https://www.stats.ox.ac.uk/pub/Rtools/goodies/ICU_531.zip[][][]@tex trm . De-pend-ing on [15 Underfull \hbox (badness 4913) in paragraph at lines 8364--8367 [][][]@smallrm installed on some Linux sys-tems as @smalltt asan_symbolize[]@sm allrm , and ob-tain-able from [][]@smalltt https://llvm.org/ Underfull \hbox (badness 10000) in paragraph at lines 8364--8367 @smalltt svn/llvm-project/compiler-rt/trunk/lib/asan/scripts/asan_symbolize.py[ ][][]@smallrm : it makes use of Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 []@textrm For op-tions avail-able @textit via @textrm the en-vi-ron-ment vari-a ble @texttt ASAN_OPTIONS[] @textrm see Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 [][]@texttt https://code.google.com/p/address-sanitizer/wiki/AddressSanitizerFL ags[][][]@textrm . Underfull \hbox (badness 10000) in paragraph at lines 8419--8423 []@textrm Recent ver-sions$[]$ added the flag `@texttt -fsanitize-address-use-a fter-scope[]@textrm '[]: see [98]] Overfull \hbox (56.55324pt too wide) in paragraph at lines 8467--8467 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] Underfull \hbox (badness 10000) in paragraph at lines 8495--8497 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 6542) in paragraph at lines 8533--8538 []@textrm See [][]@texttt https://gcc.gnu.org/onlinedocs/gcc/Instrumentation-Op tions.html[][][] @textrm (or the [99 Underfull \hbox (badness 2582) in paragraph at lines 1502--1506 []@textrm Parallel check-ing of pack-age sources (part of @texttt make check-de vel[] @textrm and @texttt make check- Underfull \hbox (badness 10000) in paragraph at lines 1539--1541 [][][]@smallrm Suitable dis-tri-bu-tions in-clude Straw-berry Perl, [][]@smallt t http://strawberryperl.com/[][][] @smallrm and Ac-tivePerl, [16entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.t2d/pdf/xtr/R-FAQ.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:]] pdf, fonts, [17] Underfull \hbox (badness 10000) in paragraph at lines 8556--8560 []@textrm From GCC 8 @texttt signed-integer-overflow[] @textrm will no longer b e a de-fault part Underfull \hbox (badness 7907) in paragraph at lines 8556--8560 @textrm of `@texttt -fsanitize=undefined[]@textrm '[], but can be spec-i-fied s ep-a-rately. It adds op-tions Underfull \hbox (badness 5878) in paragraph at lines 8583--8587 []@textrm For more de-tails on the topic see [][]@texttt http://blog.regehr.org /archives/213[][][] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 8597--8604 []@textrm Recent ver-sions of @texttt clang[] @textrm on `@texttt x86_64[]@text rm '[] Linux have `Thread-San-i-tizer' Underfull \hbox (badness 4441) in paragraph at lines 8597--8604 @textrm ([][]@texttt https://code.google.com/p/thread-sanitizer/[][][]@textrm ) , a `data race de-tec-tor for C/C@texttt ++ Overfull \hbox (50.80455pt too wide) in paragraph at lines 8626--8626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [100] Chapter 4 [18] [101 page headings, tables,] conditionals, indexing, sectioning, toc, environments, [102 Underfull \hbox (badness 10000) in paragraph at lines 1755--1759 []@textrm Installers for R-patched and R-devel are usu-ally avail-able from Underfull \hbox (badness 3872) in paragraph at lines 1755--1759 [][]@texttt https://r.research.att.com[][][]@textrm . (Some of these pack-ages are un-signed: to in-stall Underfull \hbox (badness 10000) in paragraph at lines 1783--1788 []@textrm Various parts of the build re-quire XQuartz to be in-stalled: see Underfull \hbox (badness 3009) in paragraph at lines 1783--1788 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . These in-clude the @ textbf tcltk @textrm pack-age and the @texttt X11[] Underfull \hbox (badness 10000) in paragraph at lines 1835--1839 @texttt library/mac/releasenotes/MacOSX/WhatsNewInOSX/Articles/MacOSX10_9.html[ ][][]@textrm ) which [19 defuns, macros,] cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex] [103 This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] Chapter 5 [104 formatting, and turning on texinfo input format.]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.aux Underfull \hbox (badness 10000) in paragraph at lines 1851--1853 @textrm (see [][]@texttt https://developer.apple.com/library/mac/releasenotes/ MacOSX/ Underfull \hbox (badness 3668) in paragraph at lines 1880--1892 []@textrm The in-stal-la-tion con-sists of up to four Ap-ple pack-ages:$[]$ @te xttt org.r-project.R.el- Underfull \hbox (badness 10000) in paragraph at lines 1880--1892 @texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@ textrm , @texttt org.r-project.x86_ [20] Chapter 5 [21] [105 Chapter 6 [22]]. [106] [23) [107creating doc/manual/R-exts.html (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)]] [1{/usr/share/texmf/fonts/map/pd ftex/updmap/pdftex.map [108 [24]] [109 [25]] [110] [26 Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. If @texttt R_ini t_mypkg[] @textrm calls @texttt R_ [111]] [27 [112]]. [28 [113]] Overfull \hbox (30.03963pt too wide) in paragraph at lines 9771--9771 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [114]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. Underfull \hbox (badness 3907) in paragraph at lines 2615--2623 []@textrm Utilities such as @texttt install.packages[] @textrm can be pointed a t any @reducedrm CRAN@textrm -style repos-i-tory, Underfull \hbox (badness 2158) in paragraph at lines 2615--2623 @textrm such as [][]@texttt http://www.stats.ox.ac.uk/pub/RWin[][][]@textrm : t his must be an URL scheme that [29] [115 Chapter 7 [30]}] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc] [31] [116entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.t2d/pdf/xtr/R-data.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: [-1 [32 pdf,] fonts,]] [117] [33 [118 [-2]] page headings, tables, Chapter 8 [34 conditionals, indexing,]] sectioning, toc, environments, defuns, Chapter 9 [35 macros, cross references,) [-3 Overfull \hbox (61.1125pt too wide) in paragraph at lines 10210--10212 [][][]@smallrm For ex-am-ple, `@smalltt _GLIBCXX_USE_CXX11_ABI[]@smallrm '[] in @smalltt g++[] @smallrm 5.1 and later: [][]@smalltt https://gcc.gnu.org/online docs/libstdc++/manual/using_ [119 insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex]] This is `epsf.tex' v2.7.4 <14 February 2011> ) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc localization,]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-FAQ.toc [36 formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.aux] [37)] Chapter 1 Appendix A Overfull \hbox (16.31242pt too wide) in paragraph at lines 10329--10329 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [120 [38]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)] Chapter 2 [1) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [39] [1 [121 [2{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map]]] [3 [122]] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3344--3344 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40 [4 [123]]] [5 [124] Underfull \hbox (badness 10000) in paragraph at lines 3465--3467 [][][]@smallrm also known as @smalltt ttf-mscorefonts-installer[] @smallrm in t he De-bian/Ubuntu world: see also Underfull \hbox (badness 2409) in paragraph at lines 3462--3480 @textrm avail-able at [][]@texttt https://fedorahosted.org/liberation-fonts/[][ ][]@textrm ,$[]$ which cover the Latin, [41]] [125 Underfull \hbox (badness 3158) in paragraph at lines 528--541 []@textrm Debian pack-ages, main-tained by Dirk Ed-del-buet-tel, have long been part of Underfull \hbox (badness 3769) in paragraph at lines 562--564 []@textrm See [][]@texttt https://CRAN.R-project.org/bin/linux/suse/README.html [][][] @textrm for in-for-ma-tion [6]] Underfull \hbox (badness 3078) in paragraph at lines 3530--3536 []@textrm The @texttt bitmap[] @textrm and @texttt dev2bitmap[] @textrm de-vice s and func-tion @texttt embedFonts()[] @textrm use ghost-script [42 [126 Underfull \hbox (badness 10000) in paragraph at lines 624--627 []@textrm John M. Cham-bers (2008), ``Soft-ware for Data Anal-y-sis: Pro- Underfull \hbox (badness 8132) in paragraph at lines 624--627 @textrm gram-ming with R''. Springer, New York, ISBN 978-0-387-75935-7, Underfull \hbox (badness 10000) in paragraph at lines 632--635 []@textrm Robert Gen-tle-man (2008), ``R Pro-gram-ming for Bioin-for-mat-ics'' . Underfull \hbox (badness 7379) in paragraph at lines 632--635 @textrm Chap-man & Hall/CRC, Boca Ra-ton, FL, ISBN 978-1-420-06367-7, Underfull \hbox (badness 2846) in paragraph at lines 651--654 []@textrm William N. Ven-ables and Brian D. Rip-ley (2002), ``Mod-ern Ap-plied Underfull \hbox (badness 10000) in paragraph at lines 651--654 @textrm Statis-tics with S'' (4th edi-tion). Springer, ISBN 0-387-95457-0, [7]]] [127 [8]] [43] Underfull \hbox (badness 2781) in paragraph at lines 11080--11082 [][][]@smallrm You can as-sign a @smallit copy @smallrm of the ob-ject in the e n-vi-ron-ment frame @smalltt rho[] @smallrm us-ing @smalltt defineVar(symbol, [128 Overfull \hbox (59.99986pt too wide) in paragraph at lines 787--792 @textrm and is mir-rored daily to many sites around the world. See [][]@texttt https://CRAN.R-project.org/mirrors.html[][][] [9}]]] [2 [44] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc Chapter 3 [10] Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129]] [-1 [45 [11 [130]]]]) [-2] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-data.toc [12 [131]] [46) (Acknowledgements) [13]] [132] [14 Appendix B [47] [133] Overfull \hbox (8.53186pt too wide) in paragraph at lines 88--88 [][]@textbf dataframes2xls[][]| Overfull \hbox (2.70708pt too wide) in paragraph at lines 98--98 [][]@textbf RPostgreSQL[][]| Chapter 1] [1 [134] [15] [48] [135]] [16 [136 [2]] [137] [17 [49]]] [138 Overfull \hbox (11.28497pt too wide) in paragraph at lines 1521--1524 []@textrm See also [][]@texttt https://en.wikipedia.org/wiki/R_programming_lang uage#Commercialized_ Chapter 4 [18 [3]]] [50 [19 [139 [4]]]] Chapter 5 [20 [140 [51]]] Chapter 2 [5 Overfull \hbox (22.06111pt too wide) in paragraph at lines 12183--12183 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [141]] Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 [][][]@smallrm The links there have proved dif-fi-cult to ac-cess, in which cas e ei-ther point an FTP Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 @smallrm client at [][]@smalltt ftp://www.eecs.harvard.edu/pub/nr/[][][] @small rm or grab the copy made avail-able at [52 [21 [6]] Appendix C [53] [142] [7 [22] [54 Chapter 6 [143]]]] [23 [55 [8] [144]] [24]] [9 Chapter 6 Underfull \hbox (badness 10000) in paragraph at lines 1--4782 []@textrm R has been built with Linux `@texttt ix86[]@textrm '[] and `@texttt x 86_64[]@textrm '[] C and C@texttt ++ @textrm com-pil-ers Underfull \hbox (badness 10000) in paragraph at lines 1--4782 @textrm ([][]@texttt http://clang.llvm.org[][][]@textrm ) based on the Clang fr ont-ends, in-voked by @texttt CC=clang [56 [25 [145]]]] [10 [26] [57 Chapter 3 [11]] Chapter 7] [27 [146] Underfull \hbox (badness 10000) in paragraph at lines 4877--4881 []@textrm An X sub-system is re-quired un-less con-fig-ur-ing us-ing `@texttt - -without-x[]@textrm '[]: see Underfull \hbox (badness 2221) in paragraph at lines 4877--4881 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . R's @texttt configur e[] @textrm script can be told to look for Underfull \hbox (badness 10000) in paragraph at lines 4921--4930 []@textrm There are in-stallers$[]$ for For-tran com-pil-ers for El Cap-i-tan a nd Sierra at [58]] [28 [147 [12 Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 []@textrm More re-cent and com-plete dis-tri-bu-tions of @texttt clang[] @textr m are of-ten avail-able from Underfull \hbox (badness 5288) in paragraph at lines 4946--4955 [][]@texttt http://llvm.org/releases/[][][]@textrm : for ex-am-ple at the time of writ-ing of 5.0.0 built Underfull \hbox (badness 2065) in paragraph at lines 4946--4955 @textrm for Sierra or later. In par-tic-u-lar, these should in-clude sup-port f or OpenMP. An- Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 @textrm other build of clang 4.0.0 is avail-able at [][]@texttt https://r.resea rch.att.com/libs/ Overfull \hbox (56.55324pt too wide) in paragraph at lines 4957--4957 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr /lib/pkgconfig \[] Overfull \hbox (85.29668pt too wide) in paragraph at lines 4995--4995 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf ig:/usr/lib/pkgconfig[] [59]]]] [29] Underfull \hbox (badness 2088) in paragraph at lines 1104--1112 []@textrm Octave is a nu-mer-i-cal lin-ear al-ge-bra sys-tem ([][]@texttt http: //www.octave.org[][][]@textrm ), and func-tion Chapter 4 [13] [148] Underfull \hbox (badness 10000) in paragraph at lines 5029--5039 []@textrm The T[]X im-ple-men-ta-tion used by the de-vel-op-ers is Mac-TeX Underfull \hbox (badness 2600) in paragraph at lines 5029--5039 @textrm ([][]@texttt https://www.tug.org/mactex/[][][]@textrm ): the full in-st al-la-tion is about 5GB, but a smaller [60 [30] Underfull \hbox (badness 3058) in paragraph at lines 1196--1202 @textrm data-bases and even text files (pos-si-bly com-pressed). Open Data-base Con-nec-tiv-ity [14]] [149 [61 [31] [15]]] Underfull \hbox (badness 3428) in paragraph at lines 5273--5277 @textrm than other plat-forms. This makes it de-sir-able to build PCRE with the op-tion [62 [32]] [150 [63 Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 []@textrm Package [][]@textbf RMongo[][] @textrm pro-vides an R in-ter-face to a Java client for `Mon-goDB' Underfull \hbox (badness 10000) in paragraph at lines 1355--1359 @textrm ([][]@texttt https://en.wikipedia.org/wiki/MongoDB[][][]@textrm ) data- bases, which are queried us-ing [16]] [33]] [64 [34] [151 Underfull \hbox (badness 3690) in paragraph at lines 1417--1421 []@textrm These are con-ve-nient in-ter-faces to read/write/test/delete ta-bles in the data-base. [17]] Underfull \hbox (badness 10000) in paragraph at lines 5478--5482 []@textrm Note that paths such as `@texttt /opt/csw/lib[]@textrm '[], `@texttt /usr/local/lib/amd64[]@textrm '[] and Underfull \hbox (badness 5050) in paragraph at lines 5478--5482 @textrm `@texttt /opt/csw/lib/amd64[]@textrm '[] may need to be in the []@textt t LD_LIBRARY_PATH[] @textrm dur-ing con-fig-u-ra- [65].] [35 [18] Underfull \hbox (badness 2111) in paragraph at lines 5579--5584 []@textrm The re-cent WU test-ing was done us-ing com-pil-ers from both the @re ducedrm GNU @textrm Com-piler [66]] [36 Chapter 5 [19]] [152 Underfull \hbox (badness 4492) in paragraph at lines 5703--5712 @textrm PACK code to avoid com-pu-ta-tions en-tirely in extended-precision reg- is-ters, so file [67 [37]]] Appendix D [68] Underfull \hbox (badness 3098) in paragraph at lines 1755--1761 @textrm to @reducedrm NASA@textrm 's HDF5 (Hi-er-ar-chi-cal Data For-mat, see [ ][]@texttt https://www.hdfgroup.org/HDF5/[][][]@textrm ) Underfull \hbox (badness 10000) in paragraph at lines 1755--1761 @textrm and to UCAR's netCDF data files (net-work Com-mon Data Form, see Underfull \hbox (badness 2111) in paragraph at lines 1781--1794 @textrm been adopted for the 'Xbase' fam-ily of data-bases, cov-er-ing dBase, C lip-per, Fox-Pro Underfull \hbox (badness 3098) in paragraph at lines 1781--1794 @textrm (see for ex-am-ple [][]@texttt http://www.digitalpreservation.gov/forma ts/fdd/fdd000325.shtml[][][] Chapter 6 [20 [153]] [38 [69] [154] Chapter 7 [21] [39]] Underfull \hbox (badness 5302) in paragraph at lines 5912--5915 []@textrm You may need to set the en-vi-ron-ment vari-able @texttt CYGWIN[] @te xtrm to a value in-clud-ing [70 [155]] [22 (Function and variable index) [71] [40] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.vrs Warning: unbalanced parentheses in @def...)] [23 (Concept index) [72]] [156 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.cps [41])] (Environment variable index) [73 Underfull \hbox (badness 2150) in paragraph at lines 2094--2098 []@textrm A sum-mary of all the con-nec-tions cur-rently opened by the user can be found by [24]] Underfull \hbox (badness 6559) in paragraph at lines 3385--3393 []@textrm When R trans-fers files over @reducedrm HTTP @textrm (e.g., us-ing th e @texttt install.packages()[] @textrm or Underfull \hbox (badness 10000) in paragraph at lines 3385--3393 @texttt download.file()[] @textrm func-tion), a down-load method is cho-sen bas ed on the Underfull \hbox (badness 3364) in paragraph at lines 3385--3393 @textrm `@texttt download.file.method[]@textrm '[] op-tion. There are sev-eral meth-ods avail-able and the [42 [157 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.ens] Chapter 8 Chapter 8 [25] [43]] [158) Underfull \hbox (badness 3815) in paragraph at lines 2239--2241 []@textrm The ear-lier low-level in-ter-face is given by func-tions @texttt mak e.socket[]@textrm , @texttt read.socket[]@textrm , Chapter 9 [26] [74 Chapter 9] [44]] Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159 [45 ) (see the transcript file for additional information)] Underfull \hbox (badness 10000) in paragraph at lines 3624--3632 [][]@texttt https://en.wikipedia.org/wiki/Reproducibility[][][]@textrm ) the pr ob-lem, prefer-ably the Chapter 10 [46 Overfull \hbox (38.37012pt too wide) in paragraph at lines 2363--2366 @textrm B. D. Rip-ley (2001) Con-nec-tions. @textit R News@textrm , @textbf 1/1 @textrm , 16--7. [][]@texttt https://www.r-project.org/doc/Rnews/Rnews_ (Function and variable index) Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 [162>] Chapter 8>]>>< /usr/share/texmf-dist/fonts/type1/bluesky/cm/cmmi7.pfb [164> [165>>] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14306--14306 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [166]>]>> Output written on R-admin.pdf (79 pages, 545382 bytes). Transcript written on R-admin.log. [169>]] Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173 [174] (Function and variable index) [175] (Concept index) [176] [177] ) (see the transcript file for additional information). Output written on R-exts.pdf (180 pages, 907308 bytes). Transcript written on R-exts.log. .This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.t2d/pdf/xtr/R-admin.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: pdf, fonts, page headings, tables, conditionals, indexing, sectioning, toc, environments, defuns, macros, cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.aux) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.mapThis is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-ints.texi make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: pdf, fonts, page headings, tables, conditionals, indexing, sectioning,} toc,] environments, [2 defuns,] macros, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.aux [-1make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' ]TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-lang.texi [-2]) [-3] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.toc) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) Chapter 1) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map Underfull \hbox (badness 10000) in paragraph at lines 152--157 []@textrm The tar-balls are avail-able from [][]@texttt https://stat.ethz.ch/R/ daily[][][]@textrm . Down-load Underfull \hbox (badness 4303) in paragraph at lines 180--186 @textrm to check out `@texttt r-devel[]@textrm '[] into di-rec-tory @textsl pat h @textrm (which will be cre-ated if nec-es-sary). Underfull \hbox (badness 2181) in paragraph at lines 180--186 @textrm The al-pha, beta and RC ver-sions of an up-com-ing @textsl x.y.0 @textr m re-lease are avail-able from [1] Chapter 2 [2] [3] [4] [5] [6]}] [2 [7] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc] [8 [-1]] Underfull \hbox (badness 2932) in paragraph at lines 831--841 []@textrm When sub-architectures are used the ver-sion of @texttt Rscript[] @te xtrm in e.g. `@texttt /usr/bin[]@textrm '[] will Underfull \hbox (badness 6775) in paragraph at lines 831--841 @textrm be the last in-stalled, but architecture-specific ver-sions will be ava il-able in e.g. [9] Underfull \hbox (badness 10000) in paragraph at lines 923--928 []@textrm One that may be use-ful when work-ing on R it-self is the op-tion Underfull \hbox (badness 10000) in paragraph at lines 923--928 @textrm `@texttt --disable-byte-compiled-packages[]@textrm '[], which en-sures that the base and rec-om- [10 [-2] [11]] Chapter 3 [12]. [-3 [13]] Underfull \hbox (badness 7685) in paragraph at lines 1285--1289 []@textrm or per-haps bet-ter, set the en-vi-ron-ment vari-able @texttt TAR_OP TIONS[] @textrm to the value [14]) [-4] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc Underfull \hbox (badness 10000) in paragraph at lines 1417--1423 @textrm ics li-braries built by Si-mon Ur-banek at [][]@texttt https://www.rfor ge.net/Cairo/files/ Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm The first should be un-com-mented and the sec-ond set to the top-level di- Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 @textrm rec-tory of a suit-ably pack-aged bi-nary build of ICU, for ex-am-ple t hat at Underfull \hbox (badness 10000) in paragraph at lines 1439--1445 [][]@texttt https://www.stats.ox.ac.uk/pub/Rtools/goodies/ICU_531.zip[][][]@tex trm . De-pend-ing on [15) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc] Underfull \hbox (badness 2582) in paragraph at lines 1502--1506 []@textrm Parallel check-ing of pack-age sources (part of @texttt make check-de vel[] @textrm and @texttt make check- Underfull \hbox (badness 10000) in paragraph at lines 1539--1541 [][][]@smallrm Suitable dis-tri-bu-tions in-clude Straw-berry Perl, [][]@smallt t http://strawberryperl.com/[][][] @smallrm and Ac-tivePerl, [16]) (Acknowledgements) Chapter 1 [1] [17] [2 Chapter 4 [18]] Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3 Underfull \hbox (badness 10000) in paragraph at lines 1755--1759 []@textrm Installers for R-patched and R-devel are usu-ally avail-able from Underfull \hbox (badness 3872) in paragraph at lines 1755--1759 [][]@texttt https://r.research.att.com[][][]@textrm . (Some of these pack-ages are un-signed: to in-stall Underfull \hbox (badness 10000) in paragraph at lines 1783--1788 []@textrm Various parts of the build re-quire XQuartz to be in-stalled: see Underfull \hbox (badness 3009) in paragraph at lines 1783--1788 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . These in-clude the @ textbf tcltk @textrm pack-age and the @texttt X11[] Underfull \hbox (badness 10000) in paragraph at lines 1835--1839 @texttt library/mac/releasenotes/MacOSX/WhatsNewInOSX/Articles/MacOSX10_9.html[ ][][]@textrm ) which [19]] [4 Underfull \hbox (badness 10000) in paragraph at lines 1851--1853 @textrm (see [][]@texttt https://developer.apple.com/library/mac/releasenotes/ MacOSX/ Underfull \hbox (badness 3668) in paragraph at lines 1880--1892 []@textrm The in-stal-la-tion con-sists of up to four Ap-ple pack-ages:$[]$ @te xttt org.r-project.R.el- Underfull \hbox (badness 10000) in paragraph at lines 1880--1892 @texttt capitan.fw.pkg[]@textrm , @texttt org.r-project.R.el-capitan.GUI.pkg[]@ textrm , @texttt org.r-project.x86_ [20]] Chapter 5 [21] [5 Chapter 6 [22]] Underfull \hbox (badness 10000) in paragraph at lines 494--497 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] [23]. Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm Lit-er-a-ture Clas-si-fi-ca-tion Sys-tem, [][]@texttt https://www.aeawe b.org/econlit/jelCodes.php[][][]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm or `@texttt Classification/MSC[]@textrm '[] or `@texttt Classification/ MSC-2010[]@textrm '[] (the Math-e-mat-ics Sub-ject [7] [24 [8]] [25 [9]] [10 [26]] [27] Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11] [28] [12 Underfull \hbox (badness 3907) in paragraph at lines 2615--2623 []@textrm Utilities such as @texttt install.packages[] @textrm can be pointed a t any @reducedrm CRAN@textrm -style repos-i-tory, Underfull \hbox (badness 2158) in paragraph at lines 2615--2623 @textrm such as [][]@texttt http://www.stats.ox.ac.uk/pub/RWin[][][]@textrm : t his must be an URL scheme that [29]] Chapter 7 [30 [13] [31]] [14 [32]] [15 [33]] Chapter 8 [34] Underfull \hbox (badness 10000) in paragraph at lines 1432--1439 @textrm `@texttt RnavGraph/inst/tcl[]@textrm '[], `@texttt RProtoBuf/inst/pytho n[]@textrm '[] and `@texttt emdbook/inst/BUGS[]@textrm '[] and [16 Chapter 9 [35]] [17 [36]] [18 [37]] Appendix A [38] [19] [39] [20] Underfull \hbox (badness 10000) in paragraph at lines 1852--1857 []@textrm [@texttt libRlapack[] @textrm in-cludes all the double-precision LA- PACK rou-tines which Underfull \hbox (badness 2875) in paragraph at lines 1852--1857 @textrm were cur-rent in 2003: a list of which rou-tines are in-cluded is in f ile [21] Overfull \hbox (27.8098pt too wide) in paragraph at lines 3344--3344 []@texttt ./configure --enable-utf --enable-unicode-properties --enable-jit -- disable-cpp[] [40 [22]] Underfull \hbox (badness 10000) in paragraph at lines 2044--2046 [][][][][]@smalltt http://www.openmp.org/[][][]@smallrm , [][]@smalltt https:// en.wikipedia.org/wiki/OpenMP[][][]@smallrm , [][]@smalltt https://computing.lln l.gov/ [23] Underfull \hbox (badness 10000) in paragraph at lines 3465--3467 [][][]@smallrm also known as @smalltt ttf-mscorefonts-installer[] @smallrm in t he De-bian/Ubuntu world: see also Underfull \hbox (badness 2409) in paragraph at lines 3462--3480 @textrm avail-able at [][]@texttt https://fedorahosted.org/liberation-fonts/[][ ][]@textrm ,$[]$ which cover the Latin, [41] [24] Underfull \hbox (badness 3078) in paragraph at lines 3530--3536 []@textrm The @texttt bitmap[] @textrm and @texttt dev2bitmap[] @textrm de-vice s and func-tion @texttt embedFonts()[] @textrm use ghost-script [42 Overfull \hbox (46.15797pt too wide) in paragraph at lines 2231--2231 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2233--2233 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [25]] [26] [43 [27]]creating doc/manual/R-intro.html Underfull \hbox (badness 10000) in paragraph at lines 2482--2484 [][][]@smallrm The changes are linked from [][]@smalltt https://isocpp.org/std/ standing-documents/ [28 [44]] [29] [45 Overfull \hbox (39.30717pt too wide) in paragraph at lines 2605--2605 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2653--2659 [][][][][]@smalltt See https://isocpp.org/std/standing-documents/sd-6-sg10-feat ure-test-recommendations[][][] @smallrm or [30]] [46 [31]] Appendix B [47 [32]] [48 [33.]] [49 [34]] [35 [50]] [51 Underfull \hbox (badness 2809) in paragraph at lines 3132--3138 @textrm (or set the en-vi-ron-ment vari-able @texttt _R_BUILD_KEEP_EMPTY_DIRS_[ ] @textrm to `@texttt TRUE[]@textrm '[], or have a [36]] Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 [][][]@smallrm The links there have proved dif-fi-cult to ac-cess, in which cas e ei-ther point an FTP Underfull \hbox (badness 10000) in paragraph at lines 4509--4513 @smallrm client at [][]@smalltt ftp://www.eecs.harvard.edu/pub/nr/[][][] @small rm or grab the copy made avail-able at [52 [37]] Appendix C [53] Underfull \hbox (badness 4556) in paragraph at lines 3369--3377 @textrm Others you may see are @texttt \VignettePackage[] @textrm (cur-rently i g-nored), @texttt \VignetteDepends[] [38 [54]] [39 [55]] Underfull \hbox (badness 10000) in paragraph at lines 1--4782 []@textrm R has been built with Linux `@texttt ix86[]@textrm '[] and `@texttt x 86_64[]@textrm '[] C and C@texttt ++ @textrm com-pil-ers Underfull \hbox (badness 10000) in paragraph at lines 1--4782 @textrm ([][]@texttt http://clang.llvm.org[][][]@textrm ) based on the Clang fr ont-ends, in-voked by @texttt CC=clang [56 [40]] [57 [41]] Underfull \hbox (badness 10000) in paragraph at lines 4877--4881 []@textrm An X sub-system is re-quired un-less con-fig-ur-ing us-ing `@texttt - -without-x[]@textrm '[]: see Underfull \hbox (badness 2221) in paragraph at lines 4877--4881 [][]@texttt https://xquartz.macosforge.org/[][][]@textrm . R's @texttt configur e[] @textrm script can be told to look for Underfull \hbox (badness 10000) in paragraph at lines 4921--4930 []@textrm There are in-stallers$[]$ for For-tran com-pil-ers for El Cap-i-tan a nd Sierra at [58] [42 Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 []@textrm More re-cent and com-plete dis-tri-bu-tions of @texttt clang[] @textr m are of-ten avail-able from Underfull \hbox (badness 5288) in paragraph at lines 4946--4955 [][]@texttt http://llvm.org/releases/[][][]@textrm : for ex-am-ple at the time of writ-ing of 5.0.0 built Underfull \hbox (badness 2065) in paragraph at lines 4946--4955 @textrm for Sierra or later. In par-tic-u-lar, these should in-clude sup-port f or OpenMP. An- Underfull \hbox (badness 10000) in paragraph at lines 4946--4955 @textrm other build of clang 4.0.0 is avail-able at [][]@texttt https://r.resea rch.att.com/libs/ Overfull \hbox (56.55324pt too wide) in paragraph at lines 4957--4957 []@texttt PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconfig:/usr /lib/pkgconfig \[] Overfull \hbox (85.29668pt too wide) in paragraph at lines 4995--4995 []@texttt export PKG_CONFIG_PATH=/opt/X11/lib/pkgconfig:/usr/local/lib/pkgconf ig:/usr/lib/pkgconfig[] [59]]. [43] Underfull \hbox (badness 10000) in paragraph at lines 5029--5039 []@textrm The T[]X im-ple-men-ta-tion used by the de-vel-op-ers is Mac-TeX Underfull \hbox (badness 2600) in paragraph at lines 5029--5039 @textrm ([][]@texttt https://www.tug.org/mactex/[][][]@textrm ): the full in-st al-la-tion is about 5GB, but a smaller [60 [44]] [61] [45] Underfull \hbox (badness 3428) in paragraph at lines 5273--5277 @textrm than other plat-forms. This makes it de-sir-able to build PCRE with the op-tion [62] [46 [63]] [47 [64]] [48 Underfull \hbox (badness 10000) in paragraph at lines 5478--5482 []@textrm Note that paths such as `@texttt /opt/csw/lib[]@textrm '[], `@texttt /usr/local/lib/amd64[]@textrm '[] and Underfull \hbox (badness 5050) in paragraph at lines 5478--5482 @textrm `@texttt /opt/csw/lib/amd64[]@textrm '[] may need to be in the []@textt t LD_LIBRARY_PATH[] @textrm dur-ing con-fig-u-ra- [65] Underfull \hbox (badness 2111) in paragraph at lines 5579--5584 []@textrm The re-cent WU test-ing was done us-ing com-pil-ers from both the @re ducedrm GNU @textrm Com-piler [66]] Underfull \hbox (badness 4492) in paragraph at lines 5703--5712 @textrm PACK code to avoid com-pu-ta-tions en-tirely in extended-precision reg- is-ters, so file [67 [49] Appendix D [68]] [50 [69]] Overfull \hbox (32.24495pt too wide) in paragraph at lines 4536--4536 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4538--4538 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4539--4539 [] @texttt if(jvn < 1.8) stop("Java 8 is needed for this package but not avai lable")[] [51 Underfull \hbox (badness 5302) in paragraph at lines 5912--5915 []@textrm You may need to set the en-vi-ron-ment vari-able @texttt CYGWIN[] @te xtrm to a value in-clud-ing [70]] [52 (Function and variable index) [71]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.vrs) (Concept index) [72] [53 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.cps]) (Environment variable index) [73 [54] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-admin.ens] Underfull \hbox (badness 3826) in paragraph at lines 4914--4917 []@textrm Some (but not all) ex-ten-sions are listed at [][]@texttt https://gc c.gnu.org/onlinedocs/ Underfull \hbox (badness 10000) in paragraph at lines 4914--4917 @texttt gcc/C-Extensions.html[][][] @textrm and [][]@texttt https://gcc.gnu.or g/onlinedocs/gcc/C_002b_ [55]) [74 [56]] ) (see the transcript file for additional information) [58 [61]]]] [66 Output written on R-admin.pdf (79 pages, 545382 bytes). Transcript written on R-admin.log. .] [67] [68]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. [69] [70]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texientering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: Loading texinfo [version 2008-04-18.10]: Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71 pdf, pdf, fonts, fonts,] [72 page headings, page headings,] tables, tables, conditionals, conditionals, indexing, indexing, sectioning, sectioning, toc, toc, environments, environments, defuns, defuns, macros, macros, [73 cross references, cross references, insertions, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) This is `epsf.tex' v2.7.4 <14 February 2011> )] localization, localization, formatting, formatting, and turning on texinfo input format. and turning on texinfo input format.)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) [74)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi))] [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75] [76] Underfull \hbox (badness 10000) in paragraph at lines 6762--6768 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text @textrm part of [77] [78] Underfull \hbox (badness 10000) in paragraph at lines 6904--6908 []@textrm As of R ver-sion 3.2.0, a num-ber of macros are de-fined in the file Underfull \hbox (badness 4686) in paragraph at lines 6904--6908 @textrm `@texttt share/Rd/macros/system.Rd[]@textrm '[] of the R source or home di-rec-tory, and these will [79]}] [80}] [2 [2]] [-1] Chapter 1 [-1]] Chapter 1 Overfull \hbox (3.59178pt too wide) in paragraph at lines 7074--7077 []@textrm Another is the Eclipse IDE with the Stat-ET plu-gin ([][]@texttt http ://www.walware.de/goto/statet[][][]@textrm ), Underfull \hbox (badness 3029) in paragraph at lines 7081--7083 []@textrm Some R front-ends pro-vide edit-ing sup-port for `@texttt .Rd[]@textr m '[] files, for ex-am-ple RStu-dio Chapter 3 [81] Chapter 2 [1 [1] [82]] [2 [83] [2] Cross reference values unknown; you must run TeX again.] [3 [84 Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294 @textbf storage.mode| [3]]] [4 Underfull \hbox (badness 2443) in paragraph at lines 7432--7435 []@textrm Data frames are slower than ma-tri-ces and this is an ex-am-ple of wh y. Us-ing Underfull \hbox (badness 10000) in paragraph at lines 7455--7460 []@textrm Options in-clude us-ing @texttt sprof[] @textrm for a shared ob-ject, and @texttt oprofile[] @textrm (see Underfull \hbox (badness 4927) in paragraph at lines 7455--7460 [][]@texttt http://oprofile.sourceforge.net/[][][]@textrm ) and @texttt perf[] @textrm (see [][]@texttt https://perf.wiki.kernel.org/ [85]] [86 [5 [4]] [87]] [88] [6 Overfull \hbox (310.88272pt too wide) in paragraph at lines 7675--7680 [][]@texttt https://developer.apple.com/library/mac/#documentation/DeveloperToo ls/Conceptual/InstrumentsUserGuide/Introduction/Introduction.html[][][]@textrm ). Chapter 4 [89] [5]] [90] [7 [91] [6] [8]] [92] [9 [7 [93]]] Chapter 3 [8 Underfull \hbox (badness 10000) in paragraph at lines 8057--8066 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [94 [10]]] [95 [9 [11]]] [96 [10]] [12] [11 Underfull \hbox (badness 10000) in paragraph at lines 8282--8288 []@texttt valgrind[] @textrm is good at spot-ting the use of unini-tial-ized va l-ues: use op-tion Underfull \hbox (badness 10000) in paragraph at lines 8321--8331 @textrm See [][]@texttt http://clang.llvm.org/docs/UsersManual.html#controlling -code-generation[][][]@textrm , Overfull \hbox (39.30319pt too wide) in paragraph at lines 8335--8336 [][][]@smallrm see [][]@smalltt http://llvm.org/devmtg/2014-04/PDFs/LightningTa lks/EuroLLVM%202014%20--%20container%20overflow.pdf[][][]@smallrm .| [97] [13] [12]] Underfull \hbox (badness 4913) in paragraph at lines 8364--8367 [][][]@smallrm installed on some Linux sys-tems as @smalltt asan_symbolize[]@sm allrm , and ob-tain-able from [][]@smalltt https://llvm.org/ Underfull \hbox (badness 10000) in paragraph at lines 8364--8367 @smalltt svn/llvm-project/compiler-rt/trunk/lib/asan/scripts/asan_symbolize.py[ ][][]@smallrm : it makes use of Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 []@textrm For op-tions avail-able @textit via @textrm the en-vi-ron-ment vari-a ble @texttt ASAN_OPTIONS[] @textrm see Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 [][]@texttt https://code.google.com/p/address-sanitizer/wiki/AddressSanitizerFL ags[][][]@textrm . Underfull \hbox (badness 10000) in paragraph at lines 8419--8423 []@textrm Recent ver-sions$[]$ added the flag `@texttt -fsanitize-address-use-a fter-scope[]@textrm '[]: see [98 [14]] [13.] Overfull \hbox (56.55324pt too wide) in paragraph at lines 8467--8467 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] Underfull \hbox (badness 10000) in paragraph at lines 8495--8497 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 6542) in paragraph at lines 8533--8538 []@textrm See [][]@texttt https://gcc.gnu.org/onlinedocs/gcc/Instrumentation-Op tions.html[][][] @textrm (or the [99 [14] [15]] Underfull \hbox (badness 10000) in paragraph at lines 8556--8560 []@textrm From GCC 8 @texttt signed-integer-overflow[] @textrm will no longer b e a de-fault part Underfull \hbox (badness 7907) in paragraph at lines 8556--8560 @textrm of `@texttt -fsanitize=undefined[]@textrm '[], but can be spec-i-fied s ep-a-rately. It adds op-tions Underfull \hbox (badness 5878) in paragraph at lines 8583--8587 []@textrm For more de-tails on the topic see [][]@texttt http://blog.regehr.org /archives/213[][][] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 8597--8604 []@textrm Recent ver-sions of @texttt clang[] @textrm on `@texttt x86_64[]@text rm '[] Linux have `Thread-San-i-tizer' Underfull \hbox (badness 4441) in paragraph at lines 8597--8604 @textrm ([][]@texttt https://code.google.com/p/thread-sanitizer/[][][]@textrm ) , a `data race de-tec-tor for C/C@texttt ++ Overfull \hbox (50.80455pt too wide) in paragraph at lines 8626--8626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [100 Overfull \hbox (27.8098pt too wide) in paragraph at lines 1443--1443 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1444--1444 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1446--1446 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [16 [15]] [101]] [17 [16 [102]]] [103 [17] [18 Chapter 5 [104]]] [18TEXINPUTS="../../.././doc/manual:$TEXINPUTS" LC_COLLATE=C /usr/bin/texi2dvi --texinfo="@set UseExternalXrefs " --pdf ../../.././doc/manual/R-intro.texi ] [105 [19] [19]] [106] [20 [20] [107] Chapter 4 [21] Chapter 2] [21 [108].] [22 [22] [109] [23]] [23 [110 [24]]] Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. 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If set to `@texttt registration[]@textrm '[], checks Underfull \hbox (badness 10000) in paragraph at lines 3840--3845 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [46 [45] Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129]] [47 Underfull \hbox (badness 10000) in paragraph at lines 4342--4344 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46]] [130] [48 [47 [131]]] [132] [48 [49] [133]] [134 [49] [50]] [135 Chapter 9 [51]] [50 [136]] [52 [137] (Function and Variable Index) [51]] Chapter 10 [53 (Concept Index) [138] [52] Chapter 11 Appendix A [54 [53]]] [54] Chapter 12 ) (see the transcript file for additional information)]]] (Function and variable index) [58] ) (see the transcript file for additional information)> [142> Chapter 6 [143>.> [144]< [146/us r/share/texmf-dist/fonts/type1/bluesky/cm/cmtt9.pfb>] [147 Output written on R-ints.pdf (62 pages, 349261 bytes). Transcript written on R-ints.log. ] [148] [149] [150] [151] [152] [153] [154] [155] Warning: unbalanced parentheses in @def... [156] [157] [158.] Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159] [160] Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 [161] [162] Chapter 8 [163] [164]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. 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Overfull \hbox (33.55849pt too wide) in paragraph at lines 14354--14354 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [167entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.t2d/pdf/xtr/R-lang.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:] pdf, fonts, [168] [169]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.t2d/pdf/xtr/R-ints.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: page headings, tables, conditionals, pdf, indexing, fonts, sectioning, toc, Underfull \hbox (badness 10000) in paragraph at lines 14597--14604 @texttt internet/nanoftp.c[]@textrm '[], `@texttt src/modules/internet/nanohtt p.c[]@textrm '[] and `@texttt src/modules/ [170 environments, defuns, macros, cross references,] insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, formatting, Underfull \hbox (badness 10000) in paragraph at lines 14721--14726 []@textrm Another (D)COM server, @texttt RDCOMServer[]@textrm , may be avail-a ble from Omega-hat, [171 and turning on texinfo input format. page headings,) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.aux tables, conditionals, indexing,] sectioning, [172 toc, environments,] defuns, macros, Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173 cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex] This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, [174 formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.aux] (Function and variable index) [175] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.vrs) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi)) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map [176] [177]}] [2] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.toc)}] [2] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.toc (Concept index) [178 [-1] [-1] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.cps] [-2) [-2] [179] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.toc)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.toc [-3] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.toc)] Chapter 1) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.toc) [180] [1) Chapter 1 ) (see the transcript file for additional information) Chapter 2] [2] Overfull \hbox (8.41086pt too wide) in paragraph at lines 293--294 @textbf storage.mode| [3]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex< Loading texinfo [version 2008-04-18.10]:/usr/share/texmf-dist/fonts/type1/bluesky /cm/cmsltt10.pfb]> pdf,] tables, sectioning, toc,] This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, [6 formatting, and turning on texinfo input format.) [9] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)] Output written on R-exts.pdf (186 pages, 1082121 bytes). Transcript written on R-exts.log. ) [7 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [10 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map]] Chapter 3 [8]creating doc/manual/R-ints.html [11] [9] [12 [10]] [13 [11]] [14 [12]] [13 [15]] [14] Overfull \hbox (27.8098pt too wide) in paragraph at lines 1443--1443 [] @texttt length(nM <- asNamespace("Matrix") ) # 941 for M atrix 1.2-6[] Overfull \hbox (56.55324pt too wide) in paragraph at lines 1444--1444 [] @texttt length(meth <- grep("^[.]__T__", names(nM), value=TRUE))# 107 gener ics with methods[] Overfull \hbox (45.05586pt too wide) in paragraph at lines 1445--1445 [] @texttt length(meth.Ops <- nM$`.__T__Ops:base`) # 71 methods for the 'Ops' (group)generic[] Overfull \hbox (137.03487pt too wide) in paragraph at lines 1446--1446 [] @texttt head(sort(names(meth.Ops))) ## "abIndex#abIndex" ... "ANY#ddiMatrix " "ANY#ldiMatrix" "ANY#Matrix"[] [16]}] [2 [15] [-1] (Preface) [17 Cross reference values unknown; you must run TeX again.] Chapter 1 [1]] [16 [18] [2]] [17] [3 [18 [19]]] [19 [4] [20]] [20 [5 Chapter 2 [21]] Chapter 2] Chapter 4 [6 [21]] [22] [23] [22 [7]] [24] [8 [23 Underfull \hbox (badness 3108) in paragraph at lines 2312--2317 []@textrm Some prim-i-tives are re-garded as lan-guage el-e-ments (the cur-rent ones are listed [25]].] Chapter 3 [26] [24 [9]] [27 Chapter 5 [25]] Chapter 4 [10 [28]] [26 [29] [11] [27] Chapter 3 Chapter 5 [12 [30]]] Chapter 6 [31 [13] [28]] Underfull \hbox (badness 10000) in paragraph at lines 2707--2710 @texttt ~paul/R/basegraph.html[][][] @textrm and [][]@texttt https://www.stat.a uckland.ac.nz/~paul/R/ [32] [29 [14]] [33 Chapter 4 [15]] [30 [34] [16 Chapter 6 [31]]] [35 [32 Chapter 5 [17]]] [36 [33]] [18 [34 Underfull \hbox (badness 4467) in paragraph at lines 3204--3208 []@textrm The in-ter-pre-ta-tion of the line tex-ture (@texttt par("lty"[]@text rm ) is de-scribed in the header [37]]] [19] [35 [38]] [20 [36 [39]]] [37] [21 [40] [38This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ]] Chapter 7 [39] Underfull \hbox (badness 6428) in paragraph at lines 3507--3511 []@textrm The base sys-tem state is con-tained in @texttt baseSystemState[] @te xtrm struc-ture de-fined in [41 [22] Chapter 7 [42]] Chapter 8 [40entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:] [41 Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 []@texttt R.app[] @textrm re-lies on `@texttt libR.dylib[]@textrm '[] be-ing in a spe-cific place, and hence on Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm R hav-ing been built and in-stalled as a Mac macOS `frame-work'. Specif - Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm i-cally, it uses `@texttt /Library/Frameworks/R.framework/R[]@textrm '[ ]. This is a sym-bolic Underfull \hbox (badness 3679) in paragraph at lines 3619--3628 @textrm link, as frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu -ally re-solves to Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm `@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib /libR.dylib[]@textrm '[], [43] [23 pdf, fonts,]] Chapter 8 Chapter 9 [44 [42]] [24] page headings, Chapter 6 [43 [25 [45 tables,] conditionals, indexing,]] sectioning, toc, environments, Chapter 10 [44 [26 defuns,] macros, cross references, insertions,] Underfull \hbox (badness 2326) in paragraph at lines 3840--3845 []@textrm Allows turn-ing off @texttt checkFF()[] @textrm test-ing. If set to `@texttt registration[]@textrm '[], checks Underfull \hbox (badness 10000) in paragraph at lines 3840--3845 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [46 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.aux [45 [27 [47]]] Underfull \hbox (badness 10000) in paragraph at lines 4342--4344 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46 [28]] [48 Chapter 7 [29]] [47] [30 [49] [48]] [31 [50 [49]] Chapter 8 [32 Chapter 9]] [51]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex) [50 [52] [33) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi)] [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map Chapter 10] [53 (Function and Variable Index) [51] Chapter 11 >> [-2>>>] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc Output written on R-ints.pdf (64 pages, 432981 bytes). Transcript written on R-ints.log. ) (Acknowledgements) Chapter 1 [1] [2] Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3] [4] [5] Underfull \hbox (badness 10000) in paragraph at lines 494--497 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6] Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm Lit-er-a-ture Clas-si-fi-ca-tion Sys-tem, [][]@texttt https://www.aeawe b.org/econlit/jelCodes.php[][][]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm or `@texttt Classification/MSC[]@textrm '[] or `@texttt Classification/ MSC-2010[]@textrm '[] (the Math-e-mat-ics Sub-ject [7] [8] [9]. [10]> [34] Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11 ) Overfull \hbox (46.15797pt too wide) in paragraph at lines 2231--2231 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2233--2233 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [25 localization, pdf, fonts, formatting,] and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-lang.aux [26] [27] page headings, tables, conditionals, indexing, Underfull \hbox (badness 10000) in paragraph at lines 2482--2484 [][][]@smallrm The changes are linked from [][]@smalltt https://isocpp.org/std/ standing-documents/ [28 sectioning, toc, environments,] defuns, macros, cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex [29 This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi] (/usr/share/texmf-dist/tex/texinfo/txi-en.tex) formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-ints.aux Overfull \hbox (39.30717pt too wide) in paragraph at lines 2605--2605 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2653--2659 [][][][][]@smalltt See https://isocpp.org/std/standing-documents/sd-6-sg10-feat ure-test-recommendations[][][] @smallrm or [30) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi)] [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map [31> [6 [35]]]] [36] [49 [37 [19]]] [38] Chapter 9 [19 [39] [62] [20] Chapter 2 [63]] [20 [40 Chapter 4 [21 [64]]]] Chapter 10. [41] Chapter 2 [21 [65] [22] [42]] [22 [66]] [23 [43] [23 [67]]] [24] [44 [68 [24]] Underfull \hbox (badness 3108) in paragraph at lines 2312--2317 []@textrm Some prim-i-tives are re-garded as lan-guage el-e-ments (the cur-rent ones are listed [25] [45 [69 Chapter 5] [25 Chapter 3] [26]]] [46] [26 [27 [70 [47]]]] Chapter 4 [28 [27] [48] Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71] [29 [49]]] Chapter 11 [50] [28 Chapter 5 [30] [72] [51] Chapter 6 [31] [29]] [52] Underfull \hbox (badness 10000) in paragraph at lines 2707--2710 @texttt ~paul/R/basegraph.html[][][] @textrm and [][]@texttt https://www.stat.a uckland.ac.nz/~paul/R/ [32 [73 [30]]] [53 Chapter 6 [31] [33] [32] [74] [34 [54]]] [33] [35 Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75 [34] [55 [36]]]] [35 Underfull \hbox (badness 4467) in paragraph at lines 3204--3208 []@textrm The in-ter-pre-ta-tion of the line tex-ture (@texttt par("lty"[]@text rm ) is de-scribed in the header [37 [76] [56]]] [36] [38 [57 [37]]] Underfull \hbox (badness 10000) in paragraph at lines 6762--6768 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text @textrm part of [77 [39 [58]] [38]] Chapter 7 [39 [78] [59] [40] [60] Underfull \hbox (badness 10000) in paragraph at lines 6904--6908 []@textrm As of R ver-sion 3.2.0, a num-ber of macros are de-fined in the file Underfull \hbox (badness 4686) in paragraph at lines 6904--6908 @textrm `@texttt share/Rd/macros/system.Rd[]@textrm '[] of the R source or home di-rec-tory, and these will [79]] Underfull \hbox (badness 6428) in paragraph at lines 3507--3511 []@textrm The base sys-tem state is con-tained in @texttt baseSystemState[] @te xtrm struc-ture de-fined in [41 Chapter 8 [40]] [41] Chapter 7 [42 [80] [61] Chapter 9 [42 Overfull \hbox (3.59178pt too wide) in paragraph at lines 7074--7077 []@textrm Another is the Eclipse IDE with the Stat-ET plu-gin ([][]@texttt http ://www.walware.de/goto/statet[][][]@textrm ), Underfull \hbox (badness 3029) in paragraph at lines 7081--7083 []@textrm Some R front-ends pro-vide edit-ing sup-port for `@texttt .Rd[]@textr m '[] files, for ex-am-ple RStu-dio Chapter 3 [81] Chapter 12 [62]]] Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 []@texttt R.app[] @textrm re-lies on `@texttt libR.dylib[]@textrm '[] be-ing in a spe-cific place, and hence on Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm R hav-ing been built and in-stalled as a Mac macOS `frame-work'. Specif - Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm i-cally, it uses `@texttt /Library/Frameworks/R.framework/R[]@textrm '[ ]. This is a sym-bolic Underfull \hbox (badness 3679) in paragraph at lines 3619--3628 @textrm link, as frame-works can con-tain mul-ti-ple ver-sions of R. It even-tu -ally re-solves to Underfull \hbox (badness 10000) in paragraph at lines 3619--3628 @textrm `@texttt /Library/Frameworks/R.framework/Versions/Current/Resources/lib /libR.dylib[]@textrm '[], [43] [43 [82 Chapter 8 [44 [63]]]] Chapter 10 [44 [83]] [45 [64]] [45 [84] [65 Underfull \hbox (badness 2326) in paragraph at lines 3840--3845 []@textrm Allows turn-ing off @texttt checkFF()[] @textrm test-ing. If set to `@texttt registration[]@textrm '[], checks Underfull \hbox (badness 10000) in paragraph at lines 3840--3845 @textrm the reg-is-tra-tion in-for-ma-tion (num-ber of ar-gu-ments, cor-rect c hoice of [46]]] Underfull \hbox (badness 10000) in paragraph at lines 4342--4344 []@textrm Up-to-date in-for-ma-tion on the cur-rently ac-cepted for-mats can be found by [46 Underfull \hbox (badness 2443) in paragraph at lines 7432--7435 []@textrm Data frames are slower than ma-tri-ces and this is an ex-am-ple of wh y. Us-ing Underfull \hbox (badness 10000) in paragraph at lines 7455--7460 []@textrm Options in-clude us-ing @texttt sprof[] @textrm for a shared ob-ject, and @texttt oprofile[] @textrm (see Underfull \hbox (badness 4927) in paragraph at lines 7455--7460 [][]@texttt http://oprofile.sourceforge.net/[][][]@textrm ) and @texttt perf[] @textrm (see [][]@texttt https://perf.wiki.kernel.org/ [85] [66 [47]]] [47 [86]] [67 [87] [48]] [48 [88] [68] Overfull \hbox (310.88272pt too wide) in paragraph at lines 7675--7680 [][]@texttt https://developer.apple.com/library/mac/#documentation/DeveloperToo ls/Conceptual/InstrumentsUserGuide/Introduction/Introduction.html[][][]@textrm ). Chapter 4 [89]] [49 [49 [90]] [69]] [91 [50 [50 [70]]] Chapter 9 [51]] [92 (Function and Variable Index) [51 [102]]]>> [105]] >>] [110] Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. If @texttt R_ini t_mypkg[] @textrm calls @texttt R_ [111 Output written on R-ints.pdf (64 pages, 432981 bytes). Transcript written on R-ints.log. ] [112] [113] Overfull \hbox (30.03963pt too wide) in paragraph at lines 9771--9771 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [114] [115] [116] [117]> [72] [118 [73]] [74] Overfull \hbox (61.1125pt too wide) in paragraph at lines 10210--10212 [][][]@smallrm For ex-am-ple, `@smalltt _GLIBCXX_USE_CXX11_ABI[]@smallrm '[] in @smalltt g++[] @smallrm 5.1 and later: [][]@smalltt https://gcc.gnu.org/online docs/libstdc++/manual/using_ [119 [75]] Underfull \hbox (badness 10000) in paragraph at lines 6412--6415 @textrm and these can be ac-cessed from R via the pack-age [][]@textbf rggobi[] []@textrm , de-scribed at Chapter 13 [76] Overfull \hbox (16.31242pt too wide) in paragraph at lines 10329--10329 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [120] [77] Chapter 14 [78 [121]] [79] [122] Underfull \hbox (badness 10000) in paragraph at lines 6647--6652 []@textrm Windows' UNC filepaths (such as `@texttt \\server\dir1\dir2\file[]@t extrm '[] and Underfull \hbox (badness 5189) in paragraph at lines 6647--6652 @textrm `@texttt \\?\UNC\server\dir1\dir2\file[]@textrm '[]) are not sup-porte d, but they may work in [80] [123 Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 []@textrm There is some con-fu-sion be-tween @texttt xz[] @textrm and @texttt l zma[] @textrm com-pres-sion (see Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 [][]@texttt https://en.wikipedia.org/wiki/Xz[][][] @textrm and [][]@texttt http s://en.wikipedia.org/wiki/LZMA[][][]@textrm ): Appendix A [81]] [82] [124 [83]] Appendix B [125 [84]] [126 Underfull \hbox (badness 2635) in paragraph at lines 7023--7029 @textrm `@texttt --no-site-file[]@textrm '[] was given. The name of this file is taken from the value Underfull \hbox (badness 2158) in paragraph at lines 7023--7029 @textrm of the @texttt R_PROFILE[] @textrm en-vi-ron-ment vari-able. If that v ari-able is un-set, the de-fault [85]] [127] [86] [87 Underfull \hbox (badness 2781) in paragraph at lines 11080--11082 [][][]@smallrm You can as-sign a @smallit copy @smallrm of the ob-ject in the e n-vi-ron-ment frame @smalltt rho[] @smallrm us-ing @smalltt defineVar(symbol, [128]] Underfull \hbox (badness 4752) in paragraph at lines 7295--7307 []@textrm In ad-di-tion, you can use op-tions `@texttt --arch=[]@textrm '[], `@ texttt --no-environ[]@textrm '[], `@texttt --no-init-file[]@textrm '[], [88] Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129] [89] [130] [90 [131] Appendix C] [91] [132] [92. [133]] Appendix D [93 [134] Appendix E] [94] Appendix F [95] [135 [96]] ) (see the transcript file for additional information)]] Chapter 6< [144/usr/share/texmf-dist/fonts/type1/bluesky/cm/cmsy 10.pfb> [147 Output written on R-intro.pdf (99 pages, 555453 bytes). Transcript written on R-intro.log. ] [148]creating doc/manual/R-lang.html [149] [150] [151] [152] [153] [154] [155] Warning: unbalanced parentheses in @def... [156] [157] [158] Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159] [160] Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 [161] [162] Chapter 8 [163] [164] [165]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. Overfull \hbox (22.06111pt too wide) in paragraph at lines 14306--14306 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [166] Overfull \hbox (33.55849pt too wide) in paragraph at lines 14354--14354 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [167]entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: [168 pdf, fonts,] [169] page headings, tables, Underfull \hbox (badness 10000) in paragraph at lines 14597--14604 @texttt internet/nanoftp.c[]@textrm '[], `@texttt src/modules/internet/nanohtt p.c[]@textrm '[] and `@texttt src/modules/ [170 conditionals, indexing, sectioning,] toc, environments, defuns, macros, cross references, insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex Underfull \hbox (badness 10000) in paragraph at lines 14721--14726 []@textrm Another (D)COM server, @texttt RDCOMServer[]@textrm , may be avail-a ble from Omega-hat, [171 This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] formatting, and turning on texinfo input format. [172) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.aux] Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173] [174] (Function and variable index) [175] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.vrs) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [176 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] [177])}] (Concept index) [178 [2] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toc] [-1 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.cps] [179 [-2]]) [180] ) (see the transcript file for additional information)] [2 [4 [5] Chapter 2 [6] Output written on R-exts.pdf (186 pages, 1082123 bytes). Transcript written on R-exts.log. This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) %&-line parsing enabled. [7] [8entering extended mode (./fullrefman.tex LaTeX2e <2005/12/01> Babel and hyphenation patterns for english, usenglishmax, dumylang, noh yphenation, german-x-2008-06-18, ngerman-x-2008-06-18, ancientgreek, ibycus, ar abic, basque, bulgarian, catalan, pinyin, coptic, croatian, czech, danish, dutc h, esperanto, estonian, farsi, finnish, french, galician, german, ngerman, mono greek, greek, hungarian, icelandic, indonesian, interlingua, irish, italian, la tin, mongolian, mongolian2a, bokmal, nynorsk, polish, portuguese, romanian, rus sian, sanskrit, serbian, slovak, slovenian, spanish, swedish, turkish, ukenglis h, ukrainian, uppersorbian, welsh, loaded. ! Text line contains an invalid character. l.2 ^^@ sepackage[times,hyper]{Rd} (/usr/share/texmf-dist/tex/latex/base/book.cls] Document Class: book 2005/09/16 v1.4f Standard LaTeX document class (/usr/share/texmf-dist/tex/latex/base/bk10.clo) [9) ! LaTeX Error: Missing \begin{document}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2 ^^@s epackage[times,hyper]{Rd} ! Text line contains an invalid character. l.3 ^^@ sepackage[utf8]{inputenc} (/usr/share/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texmf-dist/tex/latex/graphics/keyval.sty) (/usr/share/texmf-dist/tex/latex/graphics/graphics.sty] (/usr/share/texmf-dist/tex/latex/graphics/trig.sty)tar: R-exts.aux: Cannot stat: No such file or directory (/usr/share/texmf/tex/latex/config/graphics.cfg Overfull \hbox (35.88876pt too wide) in paragraph at lines 2--3 []\OT1/cmr/m/n/10 sepackage[times,hyper]Rd sep-a-ck-age[utf8]inputenc )tar: Exiting with failure status due to previous errors (/usr/share/texmf-dist/tex/latex/pdftex-def/pdftex.def [10))) (/usr/share/texmf-dist/tex/latex/base/makeidx.sty]) Writing index file fullrefman.idx No file fullrefman.aux. (/usr/share/texmf-dist/tex/context/base/supp-pdf.tex [11 [Loading MPS to PDF converter (version 2006.09.02).] )] Chapter 3 [1{/usr/share/texmf/fonts/map/pdftex/updmap/pdftex.map [12] [13] [14] Chapter 4 [15] [16] Chapter 5 [17] [18] [19]}] [2] [20 ! Undefined control sequence. l.45 The \R \ Core Team (./version.tex]) (/usr/share/texmf-dist/tex/latex/base/omscmr.fd) Underfull \hbox (badness 1845) in paragraph at lines 74--79 \OT1/cmr/m/n/10 R is free soft-ware and comes with AB-SO-LUTELY NO WAR-RANTY. Underfull \hbox (badness 2057) in paragraph at lines 74--79 \OT1/cmr/m/n/10 eral Pub-lic Li-cense. For more in-for-ma-tion about these mat- ters, see [1] No file fullrefman.toc. [1] [2] [1] [2] (./base-pkg.tex [21 Chapter 1. ! Undefined control sequence. l.3 \HeaderA {base-package}{The R Base Package}{base.Rdash.package} ! Undefined control sequence. l.4 \aliasA {base}{base-package}{base} ! Undefined control sequence. l.5 \keyword {package}{base-package} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11 \begin{Details} \relax ! Undefined control sequence. l.12 ... contains the basic functions which let \R {} Underfull \hbox (badness 1308) in paragraph at lines 3--16 \OT1/cmr/m/n/10 base-packageThe R Base Pack-age-base.Rdash.package basebase-pac kagebase ! Undefined control sequence. l.17 For a complete list of functions, use \code {library(help = "base")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18 \end{Details} ! Undefined control sequence. l.19 \HeaderA {.bincode}{Bin a Numeric Vector}{.bincode} ! Undefined control sequence. l.20 \keyword {category}{.bincode} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.34 \item[\code{x}] a numeric vector which is to be converted to integer co... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36 \item[\code{breaks}] a numeric vector of two or more cut points, sorted in ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38 \item[\code{right}] logical, indicating if the intervals should be clos... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40 \item[\code{include.lowest}] logical, indicating if an `x[i]' equal to ! Undefined control sequence. l.41 the lowest (or highest, for \code {right = FALSE}) `breaks' ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.43 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.44 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.46 \begin{Details} \relax ! Undefined control sequence. l.47 This is a `barebones' version of \code {cut.default(labels = ! Undefined control sequence. l.52 Unlike \code {\LinkA{cut}{cut}}, the \code{breaks} do not need to be uni... ! Undefined control sequence. l.52 Unlike \code{\LinkA {cut}{cut}}, the \code{breaks} do not need to be uni... ! Undefined control sequence. l.52 Unlike \code{\LinkA{cut}{cut}}, the \code {breaks} do not need to be uni... ! Undefined control sequence. l.54 at both ends, so only if \code {include.lowest = TRUE} and it is the ! Undefined control sequence. l.55 first (or last for \code {right = FALSE}) interval. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.56 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.58 \begin{Value} ! Undefined control sequence. l.59 An integer vector of the same length as \code {x} indicating which bin ! Undefined control sequence. l.60 ...lls into (the leftmost bin being bin \code {1}). ! Undefined control sequence. l.61 \code {NaN} and \code{NA} elements of \code{x} are mapped to ! Undefined control sequence. l.61 \code{NaN} and \code {NA} elements of \code{x} are mapped to ! Undefined control sequence. l.61 \code{NaN} and \code{NA} elements of \code {x} are mapped to ! Undefined control sequence. l.62 \code {NA} codes, as are values outside range of \code{breaks}. ! Undefined control sequence. l.62 ...odes, as are values outside range of \code {breaks}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.63 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.65 \begin{SeeAlso} \relax ! Undefined control sequence. l.66 \code {\LinkA{cut}{cut}}, \code{\LinkA{tabulate}{tabulate}} ! Undefined control sequence. l.66 \code{\LinkA {cut}{cut}}, \code{\LinkA{tabulate}{tabulate}} ! Undefined control sequence. l.66 \code{\LinkA{cut}{cut}}, \code {\LinkA{tabulate}{tabulate}} ! Undefined control sequence. l.66 \code{\LinkA{cut}{cut}}, \code{\LinkA {tabulate}{tabulate}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.67 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.69 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.70 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.71 # # An example with non-unique breaks: ! You can't use `macro parameter character #' in horizontal mode. l.71 ## An example with non-unique breaks: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.78 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.79 \end{Examples} ! Undefined control sequence. l.80 \HeaderA {.Device}{Lists of Open/Active Graphics Devices}{.Device} ! Undefined control sequence. l.81 \aliasA {.Devices}{.Device}{.Devices} ! Undefined control sequence. l.82 \keyword {device}{.Device} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.84 \begin{Description} \relax ! Undefined control sequence. l.86 \code {.Devices}. The name of the active device (see ! Undefined control sequence. l.87 \code {\LinkA{dev.cur}{dev.cur}}) is stored in \code{.Device}. Both are... ! Undefined control sequence. l.87 \code{\LinkA {dev.cur}{dev.cur}}) is stored in \code{.Device}. Both are... ! Undefined control sequence. l.87 ...nkA{dev.cur}{dev.cur}}) is stored in \code {.Device}. Both are symbols ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.89 \end{Description} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.91 \begin{Value} ! Undefined control sequence. l.92 \code {.Device} is a length-one character vector. ! Undefined control sequence. l.94 \code {.Devices} is a \LinkA{pairlist}{pairlist} of length-one character... ! Undefined control sequence. l.94 \code{.Devices} is a \LinkA {pairlist}{pairlist} of length-one character... ! Undefined control sequence. l.95 The first entry is always \code {"null device"}, and there are as many ! Undefined control sequence. l.98 \code {""} until the device number is reused. [3] ! Undefined control sequence. l.102 \code {"filepath"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.103 \end{Value} ! Undefined control sequence. l.104 \HeaderA {.Machine}{Numerical Characteristics of the Machine}{.Machine} ! Undefined control sequence. l.105 \keyword {sysdata}{.Machine} ! Undefined control sequence. l.106 \keyword {programming}{.Machine} ! Undefined control sequence. l.107 \keyword {math}{.Machine} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.109 \begin{Description} \relax ! Undefined control sequence. l.110 \code {.Machine} is a variable holding information on the numerical ! Undefined control sequence. l.111 characteristics of the machine \R {} is running on, such as the largest ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.113 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.115 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.119 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.121 \begin{Details} \relax ! Undefined control sequence. l.123 current implementations of \R {} use 32-bit integers and use IEC 60559 ! Undefined control sequence. l.125 ...our values are the same for almost all \R {} builds. ! Undefined control sequence. l.128 \code {.Machine\$double.xmin} can occur. On a typical \R{} platform the ! Undefined control sequence. l.128 ...$double.xmin} can occur. On a typical \R {} platform the ! Undefined control sequence. l.129 smallest positive double is about \code {5e-324}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.130 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.132 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.134 \begin{ldescription} Underfull \hbox (badness 5203) in paragraph at lines 127--135 []\OT1/cmr/m/n/10 Note that on most plat-forms smaller pos-i-tive val-ues than .Ma- ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.135 \item[\code{double.eps}] the smallest positive floating-point number ! Undefined control sequence. l.136 \code {x} such that \code{1 + x != 1}. It equals ! Undefined control sequence. l.136 \code{x} such that \code {1 + x != 1}. It equals ! Undefined control sequence. l.137 \code {double.base \textasciicircum{} ulp.digits} if either \code{doubl... ! Undefined control sequence. l.137 ...asciicircum{} ulp.digits} if either \code {double.base} is 2 or ! Undefined control sequence. l.138 \code {double.rounding} is 0; otherwise, it is ! Undefined control sequence. l.139 \code {(double.base \textasciicircum{} double.ulp.digits) / 2}. Normally ! Undefined control sequence. l.140 \code {2.220446e-16}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.141 \item[\code{double.neg.eps}] a small positive floating-point number \c... ! Undefined control sequence. l.141 ...mall positive floating-point number \code {x} ! Undefined control sequence. l.142 such that \code {1 - x != 1}. It equals ! Undefined control sequence. l.143 \code {double.base \textasciicircum{} double.neg.ulp.digits} if \code{d... ! Undefined control sequence. l.143 ...icircum{} double.neg.ulp.digits} if \code {double.base} is 2 ! Undefined control sequence. l.144 or \code {double.rounding} is 0; otherwise, it is ! Undefined control sequence. l.145 \code {(double.base \textasciicircum{} double.neg.ulp.digits) / 2}. No... ! Undefined control sequence. l.146 \code {1.110223e-16}. As \code{double.neg.ulp.digits} is bounded ! Undefined control sequence. l.146 \code{1.110223e-16}. As \code {double.neg.ulp.digits} is bounded ! Undefined control sequence. l.147 below by \code {-(double.digits + 3)}, \code{double.neg.eps} may not ! Undefined control sequence. l.147 below by \code{-(double.digits + 3)}, \code {double.neg.eps} may not ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.149 \item[\code{double.xmin}] the smallest non-zero normalized ! Undefined control sequence. l.151 \code {double.base \textasciicircum{} double.min.exp}. Normally \code{2... ! Undefined control sequence. l.151 ...icircum{} double.min.exp}. Normally \code {2.225074e-308}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.152 \item[\code{double.xmax}] the largest normalized floating-point number. ! Undefined control sequence. l.153 Typically, it is equal to \code {(1 - double.neg.eps) * ! Undefined control sequence. l.157 significand. Normally \code {1.797693e+308}. Note that larger ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.159 \item[\code{double.base}] the radix for the floating-point representat... ! Undefined control sequence. l.160 normally \code {2}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.161 \item[\code{double.digits}] the number of base digits in the floating-... ! Undefined control sequence. l.162 significand: normally \code {53}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.163 \item[\code{double.rounding}] the rounding action, one of\\{} ! Undefined control sequence. l.172 Normally \code {5}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.173 \item[\code{double.guard}] the number of guard digits for multiplication ! Undefined control sequence. l.175 truncates and more than \code {double digits} base-\code{double.base} d... ! Undefined control sequence. l.175 ...more than \code{double digits} base-\code {double.base} digits ! Undefined control sequence. l.178 Normally \code {0}. [4] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.179 \item[\code{double.ulp.digits}] the largest negative integer \code{i} ... ! Undefined control sequence. l.179 ...gits}] the largest negative integer \code {i} such ! Undefined control sequence. l.180 that \code {1 + double.base \textasciicircum{} i != 1}, except that it ... ! Undefined control sequence. l.181 \code {-(double.digits + 3)}. Normally \code{-52}. ! Undefined control sequence. l.181 \code{-(double.digits + 3)}. Normally \code {-52}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.182 \item[\code{double.neg.ulp.digits}] the largest negative integer \code{i} ! Undefined control sequence. l.182 ...gits}] the largest negative integer \code {i} ! Undefined control sequence. l.183 such that \code {1 - double.base \textasciicircum{} i != 1}, except tha... ! Undefined control sequence. l.184 below by \code {-(double.digits + 3)}. Normally \code{-53}. ! Undefined control sequence. l.184 ...ode{-(double.digits + 3)}. Normally \code {-53}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.185 \item[\code{double.exponent}] ! Undefined control sequence. l.186 the number of bits (decimal places if \code {double.base} is 10) reserved ! Undefined control sequence. l.188 of a floating-point number. Normally \code {11}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.189 \item[\code{double.min.exp}] ! Undefined control sequence. l.190 ...rgest in magnitude negative integer \code {i} such that ! Undefined control sequence. l.191 \code {double.base \textasciicircum{} i} is positive and normalized. N... ! Undefined control sequence. l.191 ... positive and normalized. Normally \code {-1022}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.192 \item[\code{double.max.exp}] ! Undefined control sequence. l.193 the smallest positive power of \code {double.base} that overflows. Nor... ! Undefined control sequence. l.194 \code {1024}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.195 \item[\code{integer.max}] the largest integer which can be represented. ! Undefined control sequence. l.196 Always \eqn {2^31 - 1 = 2147483647}{}. ! Missing $ inserted. $ l.196 Always \eqn{2^ 31 - 1 = 2147483647}{}. ! Extra }, or forgotten $. l.196 Always \eqn{2^31 - 1 = 2147483647} {}. ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \item [\code{sizeof.long}] the number of bytes in a C \code{long} type: ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \item[\code{sizeof.long}] the number of bytes in a C \code{long} type: ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \item[\code{sizeof.long}] the number of bytes in a C \code{long} type: ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \item[\code{sizeof.long}] the number of bytes in a C \code{long} type: ! Undefined control sequence. l.197 ...f.long}] the number of bytes in a C \code {long} type: ! Undefined control sequence. l.198 \code {4} or \code{8} (most 64-bit systems, but not Windows). ! Undefined control sequence. l.198 \code{4} or \code {8} (most 64-bit systems, but not Windows). ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.199 \item [\code{sizeof.longlong}] the number of bytes in a C \code{long long} ! Missing $ inserted. $ l.199 \item[\code{sizeof.longlong}] the number of bytes in a C \code{long long} Underfull \hbox (badness 10000) in paragraph at lines 195--199 []\OT1/cmr/m/n/10 the largest in-te-ger which can be rep-re-sented. Al-ways 2$[ ]1 \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 10000) in paragraph at lines 195--199 \OT1/cmr/m/n/10 1 = 2147483647[]\OML/cmm/m/it/10 :thenumberofbytesinaC[]type \O T1/cmr/m/n/10 : 4\OML/cmm/m/it/10 or\OT1/cmr/m/n/10 8(\OML/cmm/m/it/10 most\OT1 /cmr/m/n/10 64 \OMS/cmsy/m/n/10 ^^@ ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.199 \item[\code{sizeof.longlong}] the number of bytes in a C \code{long long} ! Undefined control sequence. l.199 ...nglong}] the number of bytes in a C \code {long long} ! Undefined control sequence. l.201 \code {8}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.202 \item[\code{sizeof.longdouble}] the number of bytes in a C \code{long ... ! Undefined control sequence. l.202 ...double}] the number of bytes in a C \code {long double} ! Undefined control sequence. l.204 disabled when \R {} was built), otherwise possibly ! Undefined control sequence. l.205 \code {12} (most 32-bit builds) or \code{16} (most 64-bit builds). ! Undefined control sequence. l.205 \code{12} (most 32-bit builds) or \code {16} (most 64-bit builds). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.206 \item[\code{sizeof.pointer}] the number of bytes in a C \code{SEXP} ! Undefined control sequence. l.206 ...ointer}] the number of bytes in a C \code {SEXP} ! Undefined control sequence. l.207 type. Will be \code {4} on 32-bit builds and \code{8} on 64-bit ! Undefined control sequence. l.207 ...ll be \code{4} on 32-bit builds and \code {8} on 64-bit ! Undefined control sequence. l.208 builds of \R {}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.209 \end{ldescription} ! Missing } inserted. } l.209 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.210 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.212 \begin{Note} \relax ! Undefined control sequence. l.213 \code {sizeof.longdouble} only tells you the amount of storage ! Undefined control sequence. l.214 ...(which are normally used internally by \R {} for ! Undefined control sequence. l.215 accumulators in e.g.~\code {\LinkA{sum}{sum}}, and can be read by ! Undefined control sequence. l.215 accumulators in e.g.~\code{\LinkA {sum}{sum}}, and can be read by ! Undefined control sequence. l.216 \code {\LinkA{readBin}{readBin}}). Often what is stored is the 80-bit ... ! Undefined control sequence. l.216 \code{\LinkA {readBin}{readBin}}). Often what is stored is the 80-bit ... ! Undefined control sequence. l.218 ...is seems to be the case for the common \R {} platforms ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.220 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.222 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.225 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.227 \begin{References} \relax ! Undefined control sequence. l.230 ...sactions on Mathematical Software}, \bold {14}, 4, 303--311. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.231 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.233 \begin{SeeAlso} \relax ! Undefined control sequence. l.234 \code {\LinkA{.Platform}{.Platform}} for details of the platform. ! Undefined control sequence. l.234 \code{\LinkA {.Platform}{.Platform}} for details of the platform. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.235 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.237 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.238 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.240 # # or for a neat printout ! You can't use `macro parameter character #' in horizontal mode. l.240 ## or for a neat printout ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.242 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.243 \end{Examples} ! Undefined control sequence. l.244 \HeaderA {.Platform}{Platform Specific Variables}{.Platform} ! Undefined control sequence. l.245 \keyword {file}{.Platform} ! Undefined control sequence. l.246 \keyword {utilities}{.Platform} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.248 \begin{Description} \relax ! Undefined control sequence. l.249 \code {.Platform} is a list with some details of the platform under ! Undefined control sequence. l.250 which \R {} was built. This provides means to write OS-portable \R{} ! Undefined control sequence. l.250 ...is provides means to write OS-portable \R {} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.252 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.254 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.258 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.260 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.263 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.264 \item[\code{OS.type}] ! Undefined control sequence. l.265 character string, giving the \bold {O}perating \bold{S}ystem ! Undefined control sequence. l.265 ...string, giving the \bold{O}perating \bold {S}ystem ! Undefined control sequence. l.266 (family) of the computer. One of \code {"unix"} or \code{"windows"}. ! Undefined control sequence. l.266 ... computer. One of \code{"unix"} or \code {"windows"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.268 \item[\code{file.sep}] ! Undefined control sequence. l.269 character string, giving the \bold {file} \bold{sep}arator used on your ! Undefined control sequence. l.269 ...cter string, giving the \bold{file} \bold {sep}arator used on your ! Undefined control sequence. l.270 platform: \code {"/"} on both Unix-alikes \emph{and} on Windows (but ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.273 \item[\code{dynlib.ext}] ! Undefined control sequence. l.274 character string, giving the file name \bold {ext}ension of ! Undefined control sequence. l.275 \bold {dyn}amically loadable \bold{lib}raries, e.g., \code{".dll"} on ! Undefined control sequence. l.275 \bold{dyn}amically loadable \bold {lib}raries, e.g., \code{".dll"} on ! Undefined control sequence. l.275 ...ly loadable \bold{lib}raries, e.g., \code {".dll"} on ! Undefined control sequence. l.276 Windows and \code {".so"} or \code{".sl"} on Unix-alikes. (Note for ! Undefined control sequence. l.276 Windows and \code{".so"} or \code {".sl"} on Unix-alikes. (Note for ! Undefined control sequence. l.278 \code {\LinkA{dyn.load}{dyn.load}} and not dylibs: see \code{\LinkA{dyn... ! Undefined control sequence. l.278 \code{\LinkA {dyn.load}{dyn.load}} and not dylibs: see \code{\LinkA{dyn... ! Undefined control sequence. l.278 ...oad}{dyn.load}} and not dylibs: see \code {\LinkA{dyn.load}{dyn.load... ! Undefined control sequence. l.278 ...n.load}} and not dylibs: see \code{\LinkA {dyn.load}{dyn.load}}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.280 \item[\code{GUI}] ! Undefined control sequence. l.281 ..., giving the type of GUI in use, or \code {"unknown"} ! Undefined control sequence. l.283 values given via the \option {-g} command-line flag (\code{"X11"}, ! Undefined control sequence. l.283 ... the \option{-g} command-line flag (\code {"X11"}, ! Undefined control sequence. l.284 \code {"Tk"}), \code{"AQUA"} (running under \code{R.app} on macOS), ! Undefined control sequence. l.284 \code{"Tk"}), \code {"AQUA"} (running under \code{R.app} on macOS), ! Undefined control sequence. l.284 ...Tk"}), \code{"AQUA"} (running under \code {R.app} on macOS), ! Undefined control sequence. l.285 \code {"Rgui"} and \code{"RTerm"} (Windows) and perhaps others under ! Undefined control sequence. l.285 \code{"Rgui"} and \code {"RTerm"} (Windows) and perhaps others under ! Undefined control sequence. l.286 alternative front-ends or embedded \R {}. [5] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.288 \item[\code{endian}] ! Undefined control sequence. l.289 character string, \code {"big"} or \code{"little"}, giving the ! Undefined control sequence. l.289 character string, \code{"big"} or \code {"little"}, giving the ! Undefined control sequence. l.292 integer or double from/to a \LinkA {connection}{connection}: see ! Undefined control sequence. l.293 \code {\LinkA{readBin}{readBin}}. ! Undefined control sequence. l.293 \code{\LinkA {readBin}{readBin}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.295 \item[\code{pkgType}] ! Undefined control sequence. l.297 \code {\LinkA{options}{options}("pkgType")}. Values \code{"source"}, ! Undefined control sequence. l.297 \code{\LinkA {options}{options}("pkgType")}. Values \code{"source"}, ! Undefined control sequence. l.297 ...ions}{options}("pkgType")}. Values \code {"source"}, ! Undefined control sequence. l.298 \code {"mac.binary.el-capitan"} and \code{"win.binary"} are currently ! Undefined control sequence. l.298 \code{"mac.binary.el-capitan"} and \code {"win.binary"} are currently ! Undefined control sequence. l.301 This should \strong {not} be used to identify the OS. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.303 \item[\code{path.sep}] ! Undefined control sequence. l.304 character string, giving the \bold {path} \bold{sep}arator, ! Undefined control sequence. l.304 ...cter string, giving the \bold{path} \bold {sep}arator, ! Undefined control sequence. l.305 used on your platform, e.g., \code {":"} on Unix-alikes and ! Undefined control sequence. l.306 \code {";"} on Windows. Used to separate paths in environment ! Undefined control sequence. l.307 variables such as \code {PATH} and \code{TEXINPUTS}. ! Undefined control sequence. l.307 variables such as \code{PATH} and \code {TEXINPUTS}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.309 \item[\code{r\_arch}] ! Undefined control sequence. l.310 character string, possibly \code {""}. The name of an ! Undefined control sequence. l.311 ...ecific directory used in this build of \R {}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.313 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.314 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.316 \begin{Section} {AQUA} ! Undefined control sequence. l.317 \code {.Platform\$GUI} is set to \code{"AQUA"} under the macOS GUI, ! Undefined control sequence. l.317 \code{.Platform\$GUI} is set to \code {"AQUA"} under the macOS GUI, ! Undefined control sequence. l.318 \code {R.app}. This has a number of consequences: ! Undefined control sequence. \file l.324 \item \file {/usr/local/bin} is \emph{appended} to the \env{PATH} ! Undefined control sequence. l.324 ...local/bin} is \emph{appended} to the \env {PATH} ! Undefined control sequence. l.326 ...e default graphics device is set to \code {quartz}. ! Undefined control sequence. l.327 ...ve (rather than Tk) widgets for the \code {graphics ! Undefined control sequence. l.328 = TRUE} options of \code {\LinkA{menu}{menu}} and \code{\LinkA{se... ! Undefined control sequence. l.328 = TRUE} options of \code{\LinkA {menu}{menu}} and \code{\LinkA{se... ! Undefined control sequence. l.328 ...ns of \code{\LinkA{menu}{menu}} and \code {\LinkA{select.list}{selec... ! Undefined control sequence. l.328 ...code{\LinkA{menu}{menu}} and \code{\LinkA {select.list}{select.list}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.335 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.337 \begin{SeeAlso} \relax ! Undefined control sequence. l.338 \code {\LinkA{R.version}{R.version}} and \code{\LinkA{Sys.info}{Sys.inf... ! Undefined control sequence. l.338 \code{\LinkA {R.version}{R.version}} and \code{\LinkA{Sys.info}{Sys.inf... ! Undefined control sequence. l.338 ...e{\LinkA{R.version}{R.version}} and \code {\LinkA{Sys.info}{Sys.info... ! Undefined control sequence. l.338 ...A{R.version}{R.version}} and \code{\LinkA {Sys.info}{Sys.info}} give... ! Undefined control sequence. l.339 about the OS. In particular, \code {R.version\$platform} is the ! Undefined control sequence. l.340 ...nical name of the platform under which \R {} was compiled. ! Undefined control sequence. l.342 \code {\LinkA{.Machine}{.Machine}} for details of the arithmetic used, and ! Undefined control sequence. l.342 \code{\LinkA {.Machine}{.Machine}} for details of the arithmetic used, and ! Undefined control sequence. l.343 \code {\LinkA{system}{system}} for invoking platform-specific system co... ! Undefined control sequence. l.343 \code{\LinkA {system}{system}} for invoking platform-specific system co... ! Undefined control sequence. l.345 \code {\LinkA{capabilities}{capabilities}} and [22 \code{\LinkA{extSoftVers... ! Undefined control sequence. l.345 \code{\LinkA {capabilities}{capabilities}} and \code{\LinkA{extSoftVers... ! Undefined control sequence. l.345 ...kA{capabilities}{capabilities}} and \code {\LinkA{extSoftVersion}{ex... ! Undefined control sequence. l.345 ...bilities}{capabilities}} and \code{\LinkA {extSoftVersion}{extSoftVe... ! Undefined control sequence. l.346 ...capabilities partly \emph{external} to \R {} ! Undefined control sequence. l.347 but used from \R {} functions. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.348 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.350 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.351 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.352 # # Note: this can be done in a system-independent way by dir.exists() ! You can't use `macro parameter character #' in horizontal mode. l.352 ## Note: this can be done in a system-independent way by dir.exists() ! You can't use `macro parameter character #' in math mode. l.357 ...xists2(c(R.home(), "/tmp", "~", "/NO")) # > T T T F ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.359 \end{ExampleCode} ! Missing $ inserted. $ l.359 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.360 \end{Examples} ! Undefined control sequence. l.361 \HeaderA {abbreviate}{Abbreviate Strings}{abbreviate} ! Undefined control sequence. l.362 \keyword {character}{abbreviate} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.364 \begin{Description} \relax ! Undefined control sequence. l.365 Abbreviate strings to at least \code {minlength} characters, ! Undefined control sequence. l.367 unless \code {strict = TRUE}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.368 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.370 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 345--371 []\OT1/cmr/m/n/10 capabilitiescapabilities and extSoft-Ver-sionextSoft-Ver-sion (and Underfull \hbox (badness 5245) in paragraph at lines 345--371 \OT1/cmr/m/n/10 links there) for avail-abil-ity of ca-pa-bil-i-ties partly \OT1 /cmr/m/it/10 ex-ter-nal \OT1/cmr/m/n/10 to but Underfull \hbox (badness 2608) in paragraph at lines 345--371 \OT1/cmr/m/n/10 used from func-tions. Note: this can be done in Underfull \hbox (badness 10000) in paragraph at lines 345--371 \OT1/cmr/m/n/10 a system-independent way by dir.exists() if(.Platform$\OML/cmm/ m/it/10 OS:type \OT1/cmr/m/n/10 == Overfull \hbox (535.87079pt too wide) in paragraph at lines 345--371 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 unix\OT1/cmr/m/n/10 ")[]$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.376 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.378 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.379 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.380 \item[\code{names.arg}] a character vector of names to be abbreviated,... ! Undefined control sequence. l.381 ...be coerced to a character vector by \code {\LinkA{as.character}{as.c... ! Undefined control sequence. l.381 ...ced to a character vector by \code{\LinkA {as.character}{as.characte... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.382 \item[\code{minlength}] the minimum length of the abbreviations. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.383 \item[\code{use.classes}] logical: should lowercase characters be remo... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.384 \item[\code{dot}] logical: should a dot (\code{"."}) be appended? ! Undefined control sequence. l.384 ...[\code{dot}] logical: should a dot (\code {"."}) be appended? [6]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.385 \item[\code{strict}] logical: should \code{minlength} be observed stri... ! Undefined control sequence. l.385 \item[\code{strict}] logical: should \code {minlength} be observed stri... ! Undefined control sequence. l.386 Note that setting \code {strict = TRUE} may return \emph{non}-unique ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.388 \item[\code{method}] a character string specifying the method used wit... ! Undefined control sequence. l.389 \code {"left.kept"}, see `Details' below. Partial matches ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.391 \item[\code{named}] logical: should \code{names} (with original vector... ! Undefined control sequence. l.391 \item[\code{named}] logical: should \code {names} (with original vector... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.392 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.393 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.395 \begin{Details} \relax ! Undefined control sequence. l.396 The default algorithm (\code {method = "left.kept"}) used is similar ! Undefined control sequence. l.401 ...e abbreviation is still longer than \code {minlength} ! Undefined control sequence. l.405 an element of \code {names.arg} contains more than one word (words are ! Undefined control sequence. l.409 Missing (\code {NA}) values are unaltered. ! Undefined control sequence. l.411 If \code {use.classes} is \code{FALSE} then the only distinction is to ! Undefined control sequence. l.411 If \code{use.classes} is \code {FALSE} then the only distinction is to ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.413 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.415 \begin{Value} ! Undefined control sequence. l.417 ...gument. Duplicates in the original \code {names.arg} ! Undefined control sequence. l.419 have the same \code {minlength} abbreviations then, if \code{method = ! Undefined control sequence. l.419 ...e{minlength} abbreviations then, if \code {method = ! Undefined control sequence. l.420 "both.sides"} the basic internal \code {abbreviate()} algorithm is ! Undefined control sequence. l.422 still duplicated abbreviations and if \code {strict = FALSE} as by ! Undefined control sequence. l.423 default, \code {minlength} is incremented by one and new abbreviations ! Undefined control sequence. l.425 unique elements of \code {names.arg} have unique abbreviations. ! Undefined control sequence. l.427 If \code {names} is true, the character version of \code{names.arg} is ! Undefined control sequence. l.427 ...} is true, the character version of \code {names.arg} is ! Undefined control sequence. l.428 attached to the returned value as a \code {\LinkA{names}{names}} attrib... ! Undefined control sequence. l.428 ...d to the returned value as a \code{\LinkA {names}{names}} attribute: no ! Undefined control sequence. l.432 ...be in UTF-8 and marked as such (see \code {\LinkA{Encoding}{Encoding... ! Undefined control sequence. l.432 ...TF-8 and marked as such (see \code{\LinkA {Encoding}{Encoding}}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.433 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.435 \begin{Section} {Warning} ! Undefined control sequence. l.436 If \code {use.classes} is true (the default), this is really only ! Undefined control sequence. l.437 suitable for English, and prior to \R {} 3.3.0 did not work correctly ! Undefined control sequence. l.441 As from \R {} 3.3.0 the concept of `vowel' is extended from ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.446 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.448 \begin{SeeAlso} \relax ! Undefined control sequence. l.449 \code {\LinkA{substr}{substr}}. ! Undefined control sequence. l.449 \code{\LinkA {substr}{substr}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.450 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.452 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manu [23al or LaTeX Companion for explanation. Type H for immediate help. ... l.453 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.456 abbreviate(x, 2, strict = TRUE) # >> 1st and 3rd are == "ab" ! You can't use `macro parameter character #' in horizontal mode. l.461 table(nchar(st.abb)) # out of 50, 3 need 4 letters : ! You can't use `macro parameter character #' in vertical mode. l.465 # # and without distinguishing vowels: ! You can't use `macro parameter character #' in vertical mode. l.465 ## and without distinguishing vowels: ! You can't use `macro parameter character #' in vertical mode. l.469 # # method = "both.sides" helps: no 4-letters, and only 4 3-letters: ! You can't use `macro parameter character #' in vertical mode. l.469 ## method = "both.sides" helps: no 4-letters, and only 4 3-letters: ! You can't use `macro parameter character #' in horizontal mode. l.472 # # Compare the two methods: ! You can't use `macro parameter character #' in horizontal mode. l.472 ## Compare the two methods: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.474 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.475 \end{Examples} ! Undefined control sequence. l.476 \HeaderA {agrep}{Approximate String Matching (Fuzzy Matching)}{agrep} ! Undefined control sequence. l.477 \aliasA {.amatch\_bounds}{agrep}{.amatch.Rul.bounds} ! Undefined control sequence. l.478 \aliasA {.amatch\_costs}{agrep}{.amatch.Rul.costs} ! Undefined control sequence. l.479 \aliasA {agrepl}{agrep}{agrepl} ! Undefined control sequence. l.480 \aliasA {fuzzy matching}{agrep}{fuzzy matching} ! Undefined control sequence. l.481 \keyword {character}{agrep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.483 \begin{Description} \relax ! Undefined control sequence. l.484 Searches for approximate matches to \code {pattern} (the first argument) ! Undefined control sequence. l.485 within each element of the string \code {x} (the second argument) using ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.489 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.491 \begin{Usage} Underfull \hbox (badness 2521) in paragraph at lines 469--492 \OT1/cmr/m/n/10 ing (Fuzzy Match-ing)agrep .am-atch[]boundsagrep.amatch.Rul.bou nds .am- [7]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.500 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.502 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.503 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.504 \item[\code{pattern}] a non-empty character string or a character string ! Undefined control sequence. l.505 containing a regular expression (for \code {fixed = FALSE}) to be ! Undefined control sequence. l.507 Coerced by \code {\LinkA{as.character}{as.character}} to a string if po... ! Undefined control sequence. l.507 Coerced by \code{\LinkA {as.character}{as.character}} to a string if po... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.508 \item[\code{x}] character vector where matches are sought. ! Undefined control sequence. l.509 Coerced by \code {\LinkA{as.character}{as.character}} to a character ve... ! Undefined control sequence. l.509 Coerced by \code{\LinkA {as.character}{as.character}} to a character ve... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.511 \item[\code{max.distance}] Maximum distance allowed for a match. Expr... ! Undefined control sequence. \code {cost}: l.518 \item[\code{cost}:] maximum number/fraction of match cost ! Undefined control sequence. \code {all}: l.520 \item[\code{all}:] maximal number/fraction of \emph{all} ! Undefined control sequence. \code {insertions}: l.522 \item[\code{insertions}:] maximum number/fraction of insertions ! Undefined control sequence. \code {deletions}: l.523 \item[\code{deletions}:] maximum number/fraction of deletions ! Undefined control sequence. \code {substitutions}: l.524 \item[\code{substitutions}:] maximum number/fraction of ! Undefined control sequence. l.529 If \code {cost} is not given, \code{all} defaults to 10\%, and the ! Undefined control sequence. l.529 If \code{cost} is not given, \code {all} defaults to 10\%, and the ! Undefined control sequence. l.530 ...sformation number bounds default to \code {all}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.533 \item[\code{costs}] a numeric vector or list with names partially matc... ! Undefined control sequence. l.534 \samp {insertions}, \samp{deletions} and \samp{substitutions} giving ! Undefined control sequence. l.534 \samp{insertions}, \samp {deletions} and \samp{substitutions} giving ! Undefined control sequence. l.534 ...p{insertions}, \samp{deletions} and \samp {substitutions} giving ! Undefined control sequence. l.536 distance, or \code {NULL} (default) indicating using unit cost for ! Undefined control sequence. l.538 Coerced to integer via \code {\LinkA{as.integer}{as.integer}} if possible. ! Undefined control sequence. l.538 Coerced to integer via \code{\LinkA {as.integer}{as.integer}} if possible. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.539 \item[\code{ignore.case}] if \code{FALSE}, the pattern matching is \em... ! Undefined control sequence. l.539 \item[\code{ignore.case}] if \code {FALSE}, the pattern matching is \em... ! Undefined control sequence. l.540 sensitive} and if \code {TRUE}, case is ignored during matching. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.541 \item[\code{value}] if \code{FALSE}, a vector containing the (integer) ! Undefined control sequence. l.541 \item[\code{value}] if \code {FALSE}, a vector containing the (integer) ! Undefined control sequence. l.542 ...tches determined is returned and if \code {TRUE}, a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.544 \item[\code{fixed}] logical. If \code{TRUE} (default), the pattern is ! Undefined control sequence. l.544 \item[\code{fixed}] logical. If \code {TRUE} (default), the pattern is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.547 \item[\code{useBytes}] logical. in a multibyte locale, should the comp... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.549 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.550 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.552 \begin{Details} \relax [8 [24] ! Undefined control sequence. l.558 This uses \code {tre} by Ville Laurikari ! Undefined control sequence. l.559 (\url {http://laurikari.net/tre/}), which supports MBCS ! Undefined control sequence. l.562 The main effect of \code {useBytes} is to avoid errors/warnings about ! Undefined control sequence. l.565 ...y input is found which is marked as \code {"bytes"} (see ! Undefined control sequence. l.566 \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.566 \code{\LinkA {Encoding}{Encoding}}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.567 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.569 \begin{Value} ! Undefined control sequence. l.570 \code {agrep} returns a vector giving the indices of the elements that ! Undefined control sequence. l.571 yielded a match, or, if \code {value} is \code{TRUE}, the matched ! Undefined control sequence. l.571 ...ded a match, or, if \code{value} is \code {TRUE}, the matched ! Undefined control sequence. l.574 \code {agrepl} returns a logical vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.575 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.577 \begin{Note} \relax ! Undefined control sequence. l.580 \code {x} (just as \code{\LinkA{grep}{grep}} does) and \bold{not} whole ! Undefined control sequence. l.580 \code{x} (just as \code {\LinkA{grep}{grep}} does) and \bold{not} whole ! Undefined control sequence. l.580 \code{x} (just as \code{\LinkA {grep}{grep}} does) and \bold{not} whole ! Undefined control sequence. l.580 ...\code{\LinkA{grep}{grep}} does) and \bold {not} whole ! Undefined control sequence. l.581 elements. See also \code {\LinkA{adist}{adist}} in package \pkg{utils}... ! Undefined control sequence. l.581 elements. See also \code{\LinkA {adist}{adist}} in package \pkg{utils}... ! Undefined control sequence. l.581 ...ode{\LinkA{adist}{adist}} in package \pkg {utils}, which ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.583 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.585 \begin{Author} \relax ! Undefined control sequence. l.586 Original version in \R {} < 2.10.0 by David Meyer. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. T] Chapter 6ype H for immediate help. ... l.588 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.590 \begin{SeeAlso} \relax ! Undefined control sequence. l.591 \code {\LinkA{grep}{grep}}, \code{\LinkA{adist}{adist}}. ! Undefined control sequence. l.591 \code{\LinkA {grep}{grep}}, \code{\LinkA{adist}{adist}}. ! Undefined control sequence. l.591 \code{\LinkA{grep}{grep}}, \code {\LinkA{adist}{adist}}. ! Undefined control sequence. l.591 \code{\LinkA{grep}{grep}}, \code{\LinkA {adist}{adist}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.592 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.594 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.595 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.601 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.602 \end{Examples} ! Undefined control sequence. l.603 \HeaderA {all}{Are All Values True?}{all} ! Undefined control sequence. l.604 \keyword {logic}{all} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.606 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.608 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.610 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.614 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.616 \begin{Arguments} ! [25 LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.617 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.618 \item[\code{...}] zero or more logical vectors. Other objects of zero ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.621 \item[\code{na.rm}] logical. If true \code{NA} values are removed before ! Undefined control sequence. l.621 \item[\code{na.rm}] logical. If true \code {NA} values are removed before ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.623 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.624 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.626 \begin{Details} \relax ! Undefined control sequence. l.628 directly or via the \code {\LinkA{Summary}{S3groupGeneric}} group generic. ! Undefined control sequence. l.628 directly or via the \code{\LinkA {Summary}{S3groupGeneric}} group generic. ! Undefined control sequence. l.629 ...his to work properly, the arguments \code {...} should be ! Undefined control sequence. l.635 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.636 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.638 \begin{Value} ! Undefined control sequence. l.641 Let \code {x} denote the concatenation of all the logical vectors in ! Undefined control sequence. l.642 \code {...} (after coercion), after removing \code{NA}s if requested by ! Undefined control sequence. l.642 ....} (after coercion), after removing \code {NA}s if requested by ! Undefined control sequence. l.643 \code {na.rm = TRUE}. ! Undefined control sequence. l.645 The value returned is \code {TRUE} if all of the values in \code{x} are ! Undefined control sequence. l.645 ...\code{TRUE} if all of the values in \code {x} are ! Undefined control sequence. l.646 \code {TRUE} (including if there are no values), and \code{FALSE} if at ! Und]efined control sequence. l.646 ...luding if there are no values), and \code {FALSE} if at ! Undefined control sequence. l.647 least one of the values in \code {x} is \code{FALSE}. Otherwise the ! Undefined control sequence. l.647 least one of the values in \code{x} is \code {FALSE}. Otherwise the ! Undefined control sequence. l.648 value is \code {NA} (which can only occur if \code{na.rm = FALSE} and ! Undefined control sequence. l.648 ... \code{NA} (which can only occur if \code {na.rm = FALSE} and ! Undefined control sequence. l.649 \code {...} contains no \code{FALSE} values and at least one ! Undefined control sequence. l.649 \code{...} contains no \code {FALSE} values and at least one ! Undefined control sequence. l.650 \code {NA} value). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.651 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.653 \begin{Section} {S4 methods} ! Undefined control sequence. l.654 This is part of the S4 \code {\LinkA{Summary}{S4groupGeneric}} ! Undefined control sequence. l.654 This is part of the S4 \code{\LinkA {Summary}{S4groupGeneric}} ! Undefined control sequence. l.656 \code {x, ..., na.rm}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.657 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.659 \begin{Note} \relax ! Undefined control sequence. l.660 That \code {all(logical(0))} is true is a useful convention: ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.662 \begin{alltt} all(all(x), all(y)) == all(x, y) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.663 \end{alltt} ! Undefined control sequence. l.665 even if \code {x} has length zero. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.666 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.668 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.672 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.674 \begin{SeeAlso} \relax ! Undefined control sequence. l.675 \code {\LinkA{any}{any}}, the `complement' of \code{all}, and ! Undefined control sequence. l.675 \code{\LinkA {any}{any}}, the `complement' of \code{all}, and ! Undefined control sequence. l.675 ...nkA{any}{any}}, the `complement' of \code {all}, and ! Undefined control sequence. l.676 \code {\LinkA{stopifnot}{stopifnot}(*)} which is an \code{all(*)} ! Undefined control sequence. l.676 \code{\LinkA {stopifnot}{stopifnot}(*)} which is an \code{all(*)} ! Undefined control sequence. l.676 ...opifnot}{stopifnot}(*)} which is an \code {all(*)} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.678 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.680 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.681 \begin{ExampleCode} ! Undefined control sequence. l.683 ...(x < 0)) cat("all x values are negative\n ") ! You can't use `macro parameter character #' in horizontal mode. l.685 all(logical(0)) # true, as all zero of the elements are true. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.686 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.687 \end{Examples} ! Undefined control sequence. l.688 \HeaderA {all.equal}{Test if Two Objects are (Nearly) Equal}{all.equal} ! Undefined control sequence. l.689 \methaliasA {all.equal.character}{all.equal}{all.equal.character} ! Undefined control sequence. l.690 \methaliasA {all.equal.default}{all.equal}{all.equal.default} ! Undefined control sequence. l.691 \methaliasA {all.equal.environment}{all.equal}{all.equal.environment} ! Undefined control sequence. l.692 \methaliasA {all.equal.envRefClass}{all.equal}{all.equal.envRefClass} ! Undefined control sequence. l.693 \methaliasA {all.equal.factor}{all.equal}{all.equal.factor} ! Undefined control sequence. l.694 \methaliasA {all.equal.formula}{all.equal}{all.equal.formula} ! Undefined control sequence. l.695 \methaliasA {all.equal.language}{all.equal}{all.equal.language} ! Undefined control sequence. l.696 \methaliasA {all.equal.list}{all.equal}{all.equal.list} ! Undefined control sequence. l.697 \methaliasA {all.equal.numeric}{all.equal}{all.equal.numeric} ! Undefined control sequence. l.698 \methaliasA {all.equal.POSIXt}{all.equal}{all.equal.POSIXt} ! Undefined control sequence. l.699 \methaliasA {all.equal.raw}{all.equal}{all.equal.raw} ! Undefined control sequence. l.700 \aliasA {attr.all.equal}{all.equal}{attr.all.equal} ! Undefined control sequence. l.701 \keyword {programming}{all.equal} ! Undefined control sequence. l.702 \keyword {utilities}{all.equal} ! Undefined control sequence. l.703 \keyword {logic}{all.equal} ! Undefined control sequence. l.704 \keyword {arith}{all.equal} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.706 \begin{Description} \relax ! Undefined control sequence. l.707 \code {all.equal(x, y)} is a utility to compare \R{} objects \code{x} ! Undefined control sequence. l.707 ...l.equal(x, y)} is a utility to compare \R {} objects \code{x} ! Undefined control sequence. l.707 ...s a utility to compare \R{} objects \code {x} ! Undefined control sequence. l.708 and \code {y} testing `near equality'. If they are different, ! Undefined control sequence. l.710 differences is returned. Do not use \code {all.equal} directly in ! Undefined control sequence. l.711 \code {if} expressions---either use \code{isTRUE(all.equal(....))} or ! Undefined control sequence. l.711 \code{if} expressions---either use \code {isTRUE(all.equal(....))} or ! Undefined control sequence. l.712 \code {\LinkA{identical}{identical}} if appropriate. ! Undefined control sequence. l.712 \code{\LinkA {identical}{identical}} if appropriate. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.713 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.715 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 685--716 []\OT1/cmr/m/n/10 all(logical(0)) true, as all zero of the el-e-ments are Underfull \hbox (badness 10000) in paragraph at lines 685--716 \OT1/cmr/m/n/10 true. all.equalTest if Two Ob-jects are (Nearly) Underfull \hbox (badness 10000) in paragraph at lines 685--716 \OT1/cmr/m/n/10 Equalall.equal all.equal.characterall.equalall.equal.character Overfull \hbox (55.61208pt too wide) in paragraph at lines 685--716 \OT1/cmr/m/n/10 all.equal.defaultall.equalall.equal.default all.equal.environme ntall.equalall.equal.environment Underfull \hbox (badness 10000) in paragraph at lines 685--716 \OT1/cmr/m/n/10 all.equal.envRefClassall.equalall.equal.envRefClass Overfull \hbox (4.00087pt too wide) in paragraph at lines 685--716 \OT1/cmr/m/n/10 all.equal.factorall.equalall.equal.factor all.equal.formulaall. equalall.equal.formula Underfull \hbox (badness 10000) in paragraph at lines 685--716 \OT1/cmr/m/n/10 all.equal.languageall.equalall.equal.language all.equal.listall .equalall.equal.list Overfull \hbox (26.4453pt too wide) in paragraph at lines 685--716 \OT1/cmr/m/n/10 all.equal.numericall.equalall.equal.numeric all.equal.POSIXtall .equalall.equal.POSIXt [9 [26]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.738 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.740 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.741 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.742 \item[\code{target}] \R{} object. ! Undefined control sequence. l.742 \item[\code{target}] \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.743 \item[\code{current}] other \R{} object, to be compared with \code{tar... ! Undefined control sequence. l.743 \item[\code{current}] other \R {} object, to be compared with \code{tar... ! Undefined control sequence. l.743 ...er \R{} object, to be compared with \code {target}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.744 \item[\code{...}] Further arguments for different methods, notably the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.746 \item[\code{tolerance}] numeric \eqn{\ge}{} 0. Differences smaller than ! Undefined control sequence. l.746 \item[\code{tolerance}] numeric \eqn {\ge}{} 0. Differences smaller than ! Missing $ inserted. $ l.746 \item[\code{tolerance}] numeric \eqn{\ge }{} 0. Differences smaller than ! Extra }, or forgotten $. l.746 \item[\code{tolerance}] numeric \eqn{\ge} {} 0. Differences smaller than ! Undefined control sequence. l.747 \code {tolerance} are not reported. The default value is close to ! Undefined control sequence. l.748 \code {1.5e-8}. ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.749 \item [\code{scale}] numeric scalar > 0 (or \code{NULL}). See `Details'. ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.749 \item[\code{scale}] numeric scalar > 0 (or \code{NULL}). See `Details'. ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.749 \item[\code{scale}] numeric scalar > 0 (or \code{NULL}). See `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.749 \item[\code{scale}] numeric scalar > 0 (or \code{NULL}). See `Details'. ! Undefined control sequence. l.749 ...code{scale}] numeric scalar > 0 (or \code {NULL}). See `Details'. ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.750 \item [\code{check.attributes}] logical indicating if the ! Missing $ inserted. $ l.750 \item[\code{check.attributes}] logical indicating if the Overfull \hbox (161.06248pt too wide) in paragraph at lines 746--750 []\OT1/cmr/m/n/10 numeric $\OMS/cmsy/m/n/10 ^^U []\OT1/cmr/m/n/10 0\OML/cmm/m/i t/10 :Differencessmallerthan[]arenotreported:Thedefaultvalueiscloseto[]:numeric scalar > ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.750 \item[\code{check.attributes}] logical indicating if the ! Undefined control sequence. l.751 \code {\LinkA{attributes}{attributes}} of \code{target} and \code{current} ! Undefined control sequence. l.751 \code{\LinkA {attributes}{attributes}} of \code{target} and \code{current} ! Undefined control sequence. l.751 ...{\LinkA{attributes}{attributes}} of \code {target} and \code{current} ! Undefined control sequence. l.751 ...}{attributes}} of \code{target} and \code {current} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.753 \item[\code{use.names}] logical indicating if \code{\LinkA{list}{list}... ! Undefined control sequence. l.753 ...e{use.names}] logical indicating if \code {\LinkA{list}{list}} compa... ! Undefined control sequence. l.753 ...ames}] logical indicating if \code{\LinkA {list}{list}} comparison ! Undefined control sequence. l.755 ... index. Note that this comes after \code {...} and so must ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.757 \item[\code{all.names}] logical passed to \code{\LinkA{ls}{ls}} indica... ! Undefined control sequence. l.757 ...\code{all.names}] logical passed to \code {\LinkA{ls}{ls}} indicatin... ! Undefined control sequence. l.757 ...ll.names}] logical passed to \code{\LinkA {ls}{ls}} indicating if ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.759 \item[\code{check.names}] logical indicating if the \code{\LinkA{names... ! Undefined control sequence. l.759 ...k.names}] logical indicating if the \code {\LinkA{names}{names}(.)} ! Undefined control sequence. l.759 ...}] logical indicating if the \code{\LinkA {names}{names}(.)} ! Undefined control sequence. l.760 of \code {target} and \code{current} should be compared. ! Undefined control sequence. l.760 of \code{target} and \code {current} should be compared. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.761 \end{ldescription} ! Missing } inserted. } l.761 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.762 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.764 \begin{Details} \relax ! Undefined control sequence. l.765 \code {all.equal} is a generic function, dispatching methods on the ! Undefined control sequence. l.766 \code {target} argument. To see the available methods, use ! Undefined control sequence. l.767 \code {\LinkA{methods}{methods}("all.equal")}, but note that the defaul... ! Undefined control sequence. l.767 \code{\LinkA {methods}{methods}("all.equal")}, but note that the defaul... [10] ! Undefined control sequence. l.771 Remember that arguments which follow \code {...} must be specified by ! Undefined control sequence. l.773 \code {...} as these will match different arguments in different ! Undefined control sequence. l.776 Numerical comparisons for \code {scale = NULL} (the default) are ! Undefined control sequence. l.780 \code {tolerance} or not finite, absolute differences are used, ! Undefined control sequence. l.782 \code {target} value. ! Undefined control sequence. l.784 where \code {target} is not \code{\LinkA{NA}{NA}} and differs from \cod... ! Undefined control sequence. l.784 where \code{target} is not \code {\LinkA{NA}{NA}} and differs from \cod... ! Undefined control sequence. l.784 where \code{target} is not \code{\LinkA {NA}{NA}} and differs from \cod... ! Undefined control sequence. l.784 ...de{\LinkA{NA}{NA}} and differs from \code {current}.) ! Undefined control sequence. l.786 If \code {scale} is positive, absolute comparisons are made after ! Undefined control sequence. l.787 scaling (dividing) by \code {scale}. ! Undefined control sequence. l.789 For complex \code {target}, the modulus (\code{\LinkA{Mod}{Mod}}) of the ! Undefined control sequence. l.789 ...complex \code{target}, the modulus (\code {\LinkA{Mod}{Mod}}) of the ! Undefined control sequence. l.789 ... \code{target}, the modulus (\code{\LinkA {Mod}{Mod}}) of the ! Undefined control sequence. l.790 difference is used: \code {all.equal.numeric} is called so arguments ! Undefined control sequence. l.791 \code {tolerance} and \code{scale} are available. ! Undefined control sequence. l.791 \code{tolerance} and \code {scale} are available. ! Undefined control sequence. l.793 The \code {\LinkA{list}{list}} method compares components of ! Undefined control sequence. l.793 The \code{\LinkA {list}{list}} method compares components of ! Undefined control sequence. l.794 \code {target} and \code{current} recursively, passing all other ! Undefined control sequence. l.794 \code{target} and \code {current} recursively, passing all other ! Undefined control sequence. l.796 either \code {\LinkA{is.vector}{is.vector}} or \code{\LinkA{is.list}{is... ! Undefined control sequence. l.796 either \code{\LinkA {is.vector}{is.vector}} or \code{\LinkA{is.list}{is... ! Undefined control sequence. l.796 ...de{\LinkA{is.vector}{is.vector}} or \code {\LinkA{is.list}{is.list}}. ! Undefined control sequence. l.796 ...kA{is.vector}{is.vector}} or \code{\LinkA {is.list}{is.list}}. ! Undefined control sequence. l.798 The \code {\LinkA{environment}{environment}} method works via the \code... ! Undefined control sequence. l.798 The \code{\LinkA {environment}{environment}} method works via the \code... ! Undefined control sequence. l.798 ...{environment}} method works via the \code {list} method, ! Undefined control sequence. l.800 \code {all.equal} method is defined). ! Undefined control sequence. l.803 \code {tolerance = 0.001} seconds, and ignore \code{scale}. ! Undefined control sequence. l.803 ...erance = 0.001} seconds, and ignore \code {scale}. ! Undefined control sequence. l.805 \code {attr.all.equal} is used for comparing ! Undefined control sequence. l.806 [27\code {\LinkA{attributes}{attributes}}, returning \code{NULL} or a ! Undefined control sequence. l.806 \code{\LinkA {attributes}{attributes}}, returning \code{NULL} or a ! Undefined control sequence. l.806 ...attributes}{attributes}}, returning \code {NULL} or a ! Undefined control sequence. l.807 \code {character} vector. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.808 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.810 \begin{Value} ! Undefined control sequence. l.811 Either \code {TRUE} (\code{NULL} for \code{attr.all.equal}) or a vector ! Undefined control sequence. l.811 Either \code{TRUE} (\code {NULL} for \code{attr.all.equal}) or a vector ! Undefined control sequence. l.811 Either \code{TRUE} (\code{NULL} for \code {attr.all.equal}) or a vector ! Undefined control sequence. l.812 of \code {\LinkA{mode}{mode}} \code{"character"} describing the differe... ! Undefined control sequence. l.812 of \code{\LinkA {mode}{mode}} \code{"character"} describing the differe... ! Undefined control sequence. l.812 of \code{\LinkA{mode}{mode}} \code {"character"} describing the differe... ! Undefined control sequence. l.813 between \code {target} and \code{current}. ! Undefined control sequence. l.813 between \code{target} and \code {current}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.814 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.816 \begin{References} \relax ! Undefined control sequence. l.819 Springer (for \code {=}). ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.820 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.822 \begin{SeeAlso} \relax ! Undefined control sequence. l.823 \code {\LinkA{identical}{identical}}, \code{\LinkA{isTRUE}{isTRUE}}, \c... ! Undefined control sequence. l.823 \code{\LinkA {identical}{identical}}, \code{\LinkA{isTRUE}{isTRUE}}, \c... ! Undefined control sequence. l.823 \code{\LinkA{identical}{identical}}, \code {\LinkA{isTRUE}{isTRUE}}, \c... ! Undefined control sequence. l.823 ...inkA{identical}{identical}}, \code{\LinkA {isTRUE}{isTRUE}}, \code{\... ! Undefined control sequence. l.823 ...l}}, \code{\LinkA{isTRUE}{isTRUE}}, \code {\LinkA{==}{==}}, and ! Undefined control sequence. l.823 ...ode{\LinkA{isTRUE}{isTRUE}}, \code{\LinkA {==}{==}}, and ! Undefined control sequence. l.824 \code {\LinkA{all}{all}} for exact equality testing. ! Undefined control sequence. l.824 \code{\LinkA {all}{all}} for exact equality testing. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.825 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.827 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.828 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.830 # not precise enough (default tol) > relative error ! You can't use `macro parameter character #' in horizontal mode. l.834 all.equal(tan(d45), rep(1, 10))) # TRUE, but ! You can't use `macro parameter character #' in horizontal mode. l.835 all (tan(d45) == rep(1, 10)) # FALSE, since not exactly ! You can't use `macro parameter character #' in horizontal mode. l.836 ...l(tan(d45), rep(1, 10), tolerance = 0) # to see difference ! You can't use `macro parameter character #' in vertical mode. l.838 # # advanced: equality of environments ! You can't use `macro parameter character #' in vertical mode. l.838 ## advanced: equality of environments ! You can't use `macro parameter character #' in horizontal mode. l.842 # # were incorrectly "considered equal" in R <= 3.1.1 ! You can't use `macro parameter character #' in horizontal mode. l.842 ## were incorrectly "considered equal" in R <= 3.1.1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.844 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.845 \end{Examples} ! Undefined control sequence. l.846 \HeaderA {all.names}{Find All Names in an Expression}{all.names} ! Undefined control sequence. l.847 \aliasA {all.vars}{all.names}{all.vars} ! Undefined control sequence. l.848 \keyword {programming}{all.names} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.850 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.853 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.855 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 838--856 []\OT1/cmr/m/n/10 advanced: equal-ity of en-vi-ron-ments ae <- Underfull \hbox (badness 10000) in paragraph at lines 838--856 \OT1/cmr/m/n/10 all.equal(as.environment("package:stats"), as-Names-pace("stats ")) Underfull \hbox (badness 1314) in paragraph at lines 838--856 \OT1/cmr/m/n/10 stopifnot(is.character(ae), length(ae) > 10, were in-cor-rectl y "con-sid-ered Overfull \hbox (1.49698pt too wide) in paragraph at lines 860--860 []\OT1/cmtt/m/n/10 all.names(expr, functions = TRUE, max.names = -1L, unique = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.861 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.863 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.864 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.865 \item[\code{expr}] an \LinkA{expression}{expression} or \LinkA{call}{c... ! Undefined control sequence. l.865 \item[\code{expr}] an \LinkA {expression}{expression} or \LinkA{call}{c... ! Undefined control sequence. l.865 ... \LinkA{expression}{expression} or \LinkA {call}{call} from which th... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.867 \item[\code{functions}] a logical value indicating whether function names ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.869 \item[\code{max.names}] the maximum number of names to be returned. \... ! Undefined control sequence. l.869 ...um number of names to be returned. \code {-1} [11] [28 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.871 \item[\code{unique}] a logical value which indicates whether duplicate... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.873 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.874 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.876 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.879 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.881 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.883 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.885 \begin{SeeAlso} \relax ! Undefined control sequence. l.886 \code {\LinkA{substitute}{substitute}} to replace symbols with values i... ! Undefined control sequence. l.886 \code{\LinkA {substitute}{substitute}} to replace symbols with values i... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.887 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.889 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.890 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.892 all.names(quote(sin(x+y))) # or a call ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.894 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.895 \end{Examples} ! Undefined control sequence. l.896 \HeaderA {any}{Are Some Values True?}{any} ! Undefined control sequence. l.897 \keyword {logic}{any} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.899 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.901 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.903 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.907 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.909 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.910 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.911 \item[\code{...}] zero or more logical vectors. Other objects of zero ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.914 \item[\code{na.rm}] logical. If true \code{NA} values are removed before ! Undefined control sequence. l.914 \item[\code{na.rm}] logical. If true \code {NA} values are removed before ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.916 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.917 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.919 \begin{Details} \relax ! Undefined control sequence. l.921 directly or via the \code {\LinkA{Summa]ry}{S3groupGeneric}} group generic. ! Undefined control sequence. l.921 directly or via the \code{\LinkA {Summary}{S3groupGeneric}} group generic. ! Undefined control sequence. l.922 ...his to work properly, the arguments \code {...} should be ! Undefined control sequence. l.928 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.929 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.931 \begin{Value} ! Undefined control sequence. l.934 Let \code {x} denote the concatenation of all the logical vectors in ! Undefined control sequence. l.935 \code {...} (after coercion), after removing \code{NA}s if requested by ! Undefined control sequence. l.935 ....} (after coercion), after removing \code {NA}s if requested by ! Undefined control sequence. l.936 \code {na.rm = TRUE}. ! Undefined control sequence. l.938 The value returned is \code {TRUE} if at least one of the values in ! Undefined control sequence. l.939 \code {x} is \code{TRUE}, and \code{FALSE} if all of the values in ! Undefined control sequence. l.939 \code{x} is \code {TRUE}, and \code{FALSE} if all of the values in ! Undefined control sequence. l.939 \code{x} is \code{TRUE}, and \code {FALSE} if all of the values in ! Undefined control sequence. l.940 \code {x} are \code{FALSE} (including if there are no values). Otherwise ! Undefined control sequence. l.940 \code{x} are \code {FALSE} (including if there are no values). Otherwise ! Undefined control sequence. l.941 the value is \code {NA} (which can only occur if \code{na.rm = FALSE} ! Undefined control sequence. l.941 ... \code{NA} (which can only occur if \code {na.rm = FALSE} ! Undefined control sequence. l.942 and \code {...} contains no \code{TRUE} values and at least one ! Undefined control sequence. l.942 and \code{...} contains no \code {TRUE} values and at least one ! Undefined control sequence. l.943 \code {NA} value). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.944 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.946 \begin{Section} {S4 methods} ! Undefined control sequence. l.947 This is part of the S4 \code {\LinkA{Summary}{S4groupGeneric}} ! Undefined control sequence. l.947 This is part of the S4 \code{\LinkA {Summary}{S4groupGeneric}} ! Undefined control sequence. l.949 \code {x, ..., na.rm}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.950 \end{Section} ! LaTeX Error: Chapter 7Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.952 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.956 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.958 \begin{SeeAlso} \relax ! Undefined control sequence. l.959 \code {\LinkA{all}{all}}, the `complement' of \code{any}. ! Undefined control sequence. l.959 \code{\LinkA {all}{all}}, the `complement' of \code{any}. ! Undefined control sequence. l.959 ...nkA{all}{all}}, the `complement' of \code {any}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.960 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.962 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.963 \begin{ExampleCode} ! Undefined control sequence. l.965 ...x < 0)) cat("x contains negative values\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.966 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.967 \end{Examples} ! Undefined control sequence. l.968 \HeaderA {aperm}{Array Transposition}{aperm} ! Undefined control sequence. l.969 \methaliasA {aperm.default}{aperm}{aperm.default} ! Undefined control sequence. l.970 \methaliasA {aperm.table}{aperm}{aperm.table} ! Undefined control sequence. l.971 \keyword {array}{aperm} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.973 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.976 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [29] l.978 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.986 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.988 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.989 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.990 \item[\code{a}] the array to be transposed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.991 \item[\code{perm}] the subscript permutation vector, usually a permuta... ! Undefined control sequence. l.992 the integers \code {1:n}, where \code{n} is the number of dimensions ! Undefined control sequence. l.992 the integers \code{1:n}, where \code {n} is the number of dimensions ! Undefined control sequence. l.993 of \code {a}. When \code{a} has named dimnames, it can be a ! Undefined control sequence. l.993 of \code{a}. When \code {a} has named dimnames, it can be a ! Undefined control sequence. l.994 character vector of length \code {n} giving a permutation of those ! Undefined control sequence. l.995 names. The default (used whenever \code {perm} has zero length) is to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.997 \item[\code{resize}] a flag indicating whether the vector should be ! Undefined control sequence. l.998 ...ing its elements reordered (default \code {TRUE}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.999 \item[\code{keep.class}] logical indicating if the result should be of... ! Undefined control sequence. l.1000 same class as \code {a}. [12] [30 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1001 \item[\code{...}] potential further arguments of methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1002 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1003 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1005 \begin{Value} ! Undefined control sequence. l.1006 A transposed version of array \code {a}, with subscripts permuted as ! Undefined control sequence. l.1007 indicated by the array \code {perm}. If \code{resize} is \code{TRUE}, ! Undefined control sequence. l.1007 ...ated by the array \code{perm}. If \code {resize} is \code{TRUE}, ! Undefined control sequence. l.1007 ... \code{perm}. If \code{resize} is \code {TRUE}, ! Undefined control sequence. l.1009 \code {dimnames} are also permuted; if \code{resize = FALSE} then the ! Undefined control sequence. l.1009 \code{dimnames} are also permuted; if \code {resize = FALSE} then the ! Undefined control sequence. l.1010 ... object has the same dimensions as \code {a}, and the dimnames ! Undefined control sequence. l.1011 ...e other attributes are copied from \code {a}. ! Undefined control sequence. l.1013 The function \code {t} provides a faster and more convenient way of ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1015 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1017 \begin{Author} \relax ! Undefined control sequence. l.1018 Jonathan Rougier, \email {J.C.Rougier@durham.ac.uk} did the ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1020 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1022 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.1026 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1028 \begin{SeeAlso} \relax ! Undefined control sequence. l.1029 \code {\LinkA{t}{t}}, to transpose matrices. ! Undefined control sequence. l.1029 \code{\LinkA {t}{t}}, to transpose matrices. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1030 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1032 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1033 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1034 # interchange the first two subscripts on a 3-way array x ! You can't use `macro parameter character #' in horizontal mode. l.1043 summary(UCB) # UCB is still a continency table ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1045 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1046 \end{Examples} ! Undefined control sequence. l.1047 \HeaderA {append}{Vector Merging}{append} ! Undefined control sequence. l.1048 \keyword {manip}{append} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1050 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1052 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1054 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1058 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1060 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1061 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1062 \item[\code{x}] the vector the values are to be appended to. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1063 \item[\code{values}] to be included in the modified vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1064 \item[\code{after}] a subscript, after which the values are to be app... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1065 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1066 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1068 \begin{Value} ! Undefined control sequence. l.1069 A vector containing the values in \code {x} with the elements of ! Undefined control sequence. l.1070 \code {values} appended after the specified element of \code{x}. ! Undefined control sequence. l.1070 ...ded after the specified element of \code {x}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1071 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1073 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1077 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1079 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1080 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1082 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1083 \end{Examples} ! Undefined control sequence. l.1084 \HeaderA {apply}{Apply Functions Over Array Margins}{apply} ! Undefined control sequence. l.1085 \keyword {iteration}{apply} ! Undefined control sequence. l.1086 \keyword {array}{apply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1088 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1091 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1093 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1097 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1099 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1100 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1101 \item[\code{X}] an array, including a matrix. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1102 \item[\code{MARGIN}] a vector giving the subscripts which the functio... ! Undefined control sequence. l.1103 be applied over. E.g., for a matrix \code {1} indicates rows, ! Undefined control sequence. l.1104 \code {2} indicates columns, \code{c(1, 2)} indicates rows and ! Undefined control sequence. l.1104 \code{2} indicates columns, \code {c(1, 2)} indicates rows and ! Undefined control sequence. l.1105 columns. Where \code {X} has named dimnames, it can be a character ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1107 \item[\code{FUN}] the function to be applied: see `Details'. ! Undefined control sequence. l.1108 In the case of functions like \code {+}, \code{\%*\%}, etc., the ! Undefined control sequence. l.1108 ...e case of functions like \code{+}, \code {\%*\%}, etc., the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1110 \item[\code{...}] optional arguments to \code{FUN}. ! Undefined control sequence. l.1110 ...[\code{...}] optional arguments to \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1111 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1112 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1114 \begin{Details} \relax ! Undefined control sequence. l.1115 If \code {X} is not an array but an object of a class with a non-null ! Undefined control sequence. l.1116 \code {\LinkA{dim}{dim}} value (such as a data frame), \code{apply} at... ! Undefined control sequence. l.1116 \code{\LinkA {dim}{dim}} value (such as a data frame), \code{apply} at... ! Undefined control sequence. l.1116 ...im}} value (such as a data frame), \code {apply} attempts ! Undefined control sequence. l.1117 to coerce it to an array via \code {as.matrix} if it is two-dimensional ! Undefined control sequence. l.1118 (e.g., a data frame) or via \code {as.array}. ! Undefined control sequence. l.1120 \code {FUN} is found by a call to \code{\LinkA{match.fun}{match.fun}} ... ! Undefined control sequence. l.1120 \code{FUN} is found by a call to \code {\LinkA{match.fun}{match.fun}} ... ! Undefined control sequence. l.1120 ...{FUN} is found by a call to \code{\LinkA {match.fun}{match.fun}} an... ! Undefined control sequence. l.1123 environment of the call to \code {apply}. ! Undefined control sequence. l.1125 Arguments in \code {...} cannot have the same name as any of the ! Undefined control sequence. l.1127 \code {MARGIN} or \code{FUN}. In general-purpose code it is good ! Undefined control sequence. l.1127 \code{MARGIN} or \code {FUN}. In general-purpose code it is good ! Undefined control sequence. l.1128 ... name the first three arguments if \code {...} is passed ! Undefined control sequence. l.1129 ...is both avoids partial matching to \code {MARGIN} ! Undefined control sequence. l.1130 or \code {FUN} and ensures that a sensible error message is given if ! Undefined control sequence. l.1131 arguments named \code {X}, \code{MARGIN} or \code{FUN} are passed ! Undefined control sequence. l.1131 arguments named \code{X}, \code {MARGIN} or \code{FUN} are passed ! Undefined control sequence. l.1131 ...s named \code{X}, \code{MARGIN} or \code {FUN} are passed ! Undefined control sequence. l.1132 through \code {...}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1133 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1135 \begin{Value} ! Undefined control sequence. l.1136 If each call to \code {FUN} returns a vector of length \code{n}, then ! Undefined control sequence. l.1136 ...de{FUN} returns a vector of length \code {n}, then ! Undefined control sequence. l.1137 \code {apply} returns an array of dimension \code{c(n, dim(X)[MARGIN])} ! Undefined control sequence. l.1137 ...ply} returns an array of dimension \code {c(n, dim(X)[MARGIN])} ! Undefined control sequence. l.1138 if \code {n > 1}. If \code{n} equals \code{1}, \code{apply} returns a ! Undefined control sequence. l.1138 if \code{n > 1}. If \code {n} equals \code{1}, \code{apply} returns a ! Undefined control sequence. l.1138 if \code{n > 1}. If \code{n} equals \code {1}, \code{apply} returns a ! Undefined control sequence. l.1138 ... 1}. If \code{n} equals \code{1}, \code {apply} returns a ! Undefined control sequence. l.1139 vector if \code {MARGIN} has length 1 and an array of dimension ! Undefined control sequence. l.1140 \code {dim(X)[MARGIN]} otherwise. ! Undefined control sequence. l.1141 If \code {n} is \code{0}, the result has length 0 but not necessarily ! Undefined control sequence. l.1141 If \code{n} is \code {0}, the result has length 0 but not necessarily [13 [31]] ! Undefined control sequence. l.1144 If the calls to \code {FUN} return vectors of different lengths, ! Undefined control sequence. l.1145 \code {apply} returns a list of length \code{prod(dim(X)[MARGIN])} with ! Undefined control sequence. l.1145 \code{apply} returns a list of length \code {prod(dim(X)[MARGIN])} with ! Undefined control sequence. l.1146 \code {dim} set to \code{MARGIN} if this has length greater than one. ! Undefined control sequence. l.1146 \code{dim} set to \code {MARGIN} if this has length greater than one. ! Undefined control sequence. l.1148 In all cases the result is coerced by \code {\LinkA{as.vector}{as.vect... ! Undefined control sequence. l.1148 ...es the result is coerced by \code{\LinkA {as.vector}{as.vector}} to... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1151 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1153 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1157 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1159 \begin{SeeAlso} \relax ! Undefined control sequence. l.1160 \code {\LinkA{lapply}{lapply}} and there, \code{\LinkA{simplify2array}... ! Undefined control sequence. l.1160 \code{\LinkA {lapply}{lapply}} and there, \code{\LinkA{simplify2array}... ! Undefined control sequence. l.1160 ...\LinkA{lapply}{lapply}} and there, \code {\LinkA{simplify2array}{si... ! Undefined control sequence. l.1160 ...lapply}{lapply}} and there, \code{\LinkA {simplify2array}{simplify2... ! Undefined control sequence. l.1161 \code {\LinkA{tapply}{tapply}}, and convenience functions ! Undefined control sequence. l.1161 \code{\LinkA {tapply}{tapply}}, and convenience functions ! Undefined control sequence. l.1162 \code {\LinkA{sweep}{sweep}} and \code{\LinkA{aggregate}{aggregate}}. ! Undefined control sequence. l.1162 \code{\LinkA {sweep}{sweep}} and \code{\LinkA{aggregate}{aggregate}}. ! Undefined control sequence. l.1162 \code{\LinkA{sweep}{sweep}} and \code {\LinkA{aggregate}{aggregate}}. ! Undefined control sequence. l.1162 ...e{\LinkA{sweep}{sweep}} and \code{\LinkA {aggregate}{aggregate}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1163 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1165 \be Chapter 8 [32]gin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1166 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1167 # # Compute row and column sums for a matrix: ! You can't use `macro parameter character #' in horizontal mode. l.1167 ## Compute row and column sums for a matrix: ! You can't use `macro parameter character #' in vertical mode. l.1177 # # Sort the columns of a matrix ! You can't use `macro parameter character #' in vertical mode. l.1177 ## Sort the columns of a matrix ! You can't use `macro parameter character #' in vertical mode. l.1180 # # keeping named dimnames ! You can't use `macro parameter character #' in vertical mode. l.1180 ## keeping named dimnames Underfull \hbox (badness 1454) in paragraph at lines 1180--1186 []\OT1/cmr/m/n/10 keeping named dim-names names(dimnames(x)) <- c("row", "col") x3 Underfull \hbox (badness 2126) in paragraph at lines 1180--1186 \OT1/cmr/m/n/10 <- ar-ray(x, dim = c(dim(x),3), dim-names = c(dimnames(x), list (C = ! You can't use `macro parameter character #' in vertical mode. l.1187 # #- function with extra args: ! You can't use `macro parameter character #' in vertical mode. l.1187 ## - function with extra args: ! You can't use `macro parameter character #' in horizontal mode. l.1193 apply(ma, 1, table) # --> a list of length 2 ! You can't use `macro parameter character #' in horizontal mode. l.1194 apply(ma, 1, stats::quantile) # 5 x n matrix with rownames ! You can't use `macro parameter character #' in vertical mode. l.1198 # # Example with different lengths for each call ! You can't use `macro parameter character #' in vertical mode. l.1198 ## Example with different lengths for each call ! Missing $ inserted. $ l.1200 zseq <- apply(z, 1:2, function(x) seq_ len(max(x))) ! You can't use `macro parameter character #' in math mode. l.1201 zseq # # a 2 x 3 matrix ! You can't use `macro parameter character #' in math mode. l.1201 zseq ## a 2 x 3 matrix ! You can't use `macro parameter character #' in math mode. l.1202 typeof(zseq) # # list ! You can't use `macro parameter character #' in math mode. l.1202 typeof(zseq) ## list ! You can't use `macro parameter character #' in math mode. l.1203 dim(zseq) # # 2 3 ! You can't use `macro parameter character #' in math mode. l.1203 dim(zseq) ## 2 3 ! You can't use `macro parameter character #' in math mode. l.1206 # a list without a dim attribute ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1207 \end{ExampleCode} ! Missing $ inserted. $ l.1207 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1208 \end{Examples} ! Undefined control sequence. l.1209 \HeaderA {args}{Argument List of a Function}{args} ! Undefined control sequence. l.1210 \keyword {documentation}{args} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1212 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1215 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1217 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 1198--1218 []\OT1/cmr/m/n/10 Example with dif-fer-ent lengths for each call z <- ar- Underfull \hbox (badness 10000) in paragraph at lines 1198--1218 \OT1/cmr/m/n/10 ray(1:24, dim = 2:4) zseq <- ap-ply(z, 1:2, func-tion(x) Overfull \hbox (248.22433pt too wide) in paragraph at lines 1198--1218 \OT1/cmr/m/n/10 seq$[]\OML/cmm/m/it/10 en\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 max\ OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )))\OML/cmm/m/it/10 zseqa\OT1 /cmr/m/n/10 2\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 3\OML/cmm/m/it/10 matrixtypeof\O T1/cmr/m/n/10 (\OML/cmm/m/it/10 zseq\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 listdim\O T1/cmr/m/n/10 (\OML/cmm/m/it/10 zseq\OT1/cmr/m/n/10 )23\OML/cmm/m/it/10 zseq\OT 1/cmr/m/n/10 [1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 ]\OML/cmm/m/it/10 apply\OT1/c mr/m/n/10 (\OML/cmm/m/it/10 z; \OT1/cmr/m/n/10 3\OML/cmm/m/it/10 ; function\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 seq[]en\OT1/cm r/m/n/10 (\OML/cmm/m/it/10 max\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/1 0 )))\OML/cmm/m/it/10 alistwithoutadimattribute$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1221 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1223 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1224 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1225 \item[\code{name}] a function (a closure or a primitive). ! Undefined control sequence. l.1226 If \code {name} is a character string then the function with that ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1228 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1229 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1231 \begin{Details} \relax ! Undefined control sequence. l.1233 .... For programming, consider using \code {\LinkA{formals}{formals}} ! Undefined control sequence. l.1233 ...programming, consider using \code{\LinkA {formals}{formals}} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1235 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1237 \begin{Value} ! Undefined control sequence. l.1239 empty (\code {NULL}) body. ! Undefined control sequence. l.1241 ...sure with the documented usage and \code {NULL} ! Undefined control sequence. l.1245 \code {NULL} in case of a non-function. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1246 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1248 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1252 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1254 \begin{SeeAlso} \relax ! Undefined control sequence. l.1255 \code {\LinkA{formals}{formals}}, \code{\LinkA{help}{help}}; ! Undefined control sequence. l.1255 \code{\LinkA {formals}{formals}}, \code{\LinkA{help}{help}}; ! Undefined control sequence. l.1255 \code{\LinkA{formals}{formals}}, \code {\LinkA{help}{help}}; ! Undefined control sequence. l.1255 ...{\LinkA{formals}{formals}}, \code{\LinkA {help}{help}}; ! Undefined control sequence. l.1256 \code {\LinkA{str}{str}} also prints the argument list of a function. ! Undefined control sequence. l.1256 \code{\LinkA {str}{str}} also prints the argument list of a function. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1257 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1259 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1260 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1261 # # "regular" (non-primitive) functions "print their arguments" ! You can't use `macro parameter character #' in horizontal mode. l.1261 ## "regular" (non-primitive) functions "print their arguments" ! You can't use `macro parameter character #' in horizontal mode. l.1262 # # (by returning another function with NULL body which you also see): ! You can't use `macro parameter character #' in horizontal mode. l.1262 ## (by returning another function with NULL body which you also see): ! You can't use `macro parameter character #' in horizontal mode. l.1265 utils::str(ls) # (just "prints": does not show a NULL) [14] ! You can't use `macro parameter character #' in vertical mode. l.1267 # # You can also pass a string naming a function. ! You can't use `macro parameter character #' in vertical mode. l.1267 ## You can also pass a string naming a function. ! You can't use `macro parameter character #' in horizontal mode. l.1269 # # ...but :: package specification doesn't work in this case. ! You can't use `macro parameter character #' in horizontal mode. l.1269 ## ...but :: package specification doesn't work in this case. ! You can't use `macro parameter character #' in vertical mode. l.1272 # # As explained above, args() gives a function with empty body: ! You can't use `macro parameter character #' in vertical mode. l.1272 ## As explained above, args() gives a function with empty body: ! You can't use `macro parameter character #' in vertical mode. l.1275 # # Primitive functions mostly behave like non-primitive functions. ! You can't use `macro parameter character #' in vertical mode. l.1275 ## Primitive functions mostly behave like non-primitive functions. ! You can't use `macro parameter character #' in horizontal mode. l.1278 # # primitive functions without well-defined argument list return NULL: ! You can't use `macro parameter character #' in horizontal mode. l.1278 ## primitive functions without well-defined argument list return NULL: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1280 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1281 \end{Examples} ! Undefined control sequence. l.1282 \HeaderA {Arithmetic}{Arithmetic Operators}{Arithmetic} ! Undefined control sequence. l.1283 \aliasA {\%\%}{Arithmetic}{.Rpcent..Rpcent.} ! Undefined control sequence. l.1284 \aliasA {\%/\%}{Arithmetic}{.Rpcent./.Rpcent.} ! Undefined control sequence. l.1285 \aliasA {*}{Arithmetic}{*} ! Undefined control sequence. l.1286 \aliasA {**}{Arithmetic}{**} ! Undefined control sequence. l.1287 \aliasA {+}{Arithmetic}{+} ! Undefined control sequence. l.1288 \aliasA {-}{Arithmetic}{.Rdash.} ! Undefined control sequence. l.1289 \aliasA {/}{Arithmetic}{/} ! Undefined control sequence. l.1290 \aliasA {\textasciicircum{}}{Arithmetic}{.Rcaret.} ! Undefined control sequence. l.1291 \keyword {arith}{Arithmetic} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1293 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1296 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1298 \begin{Usage} Underfull \hbox (badness 1478) in paragraph at lines 1275--1299 \OT1/cmr/m/n/10 args(`+`) prim-i-tive func-tions with-out well-defined ar-gu-m ent list re-turn Underfull \hbox (badness 2134) in paragraph at lines 1275--1299 \OT1/cmr/m/n/10 NULL: args(`if`) [33 Arith-meti-cArith-metic Op-er-a-tor-sArith-m etic %%Arith- Underfull \hbox (badness 3679) in paragraph at lines 1275--1299 \OT1/cmr/m/n/10 metic.Rpcent..Rpcent. %/%Arith-metic.Rpcent./.Rpcent. *Arith-me tic* Underfull \hbox (badness 1881) in paragraph at lines 1275--1299 \OT1/cmr/m/n/10 **Arith-metic** +Arith-metic+ -Arithmetic.Rdash. /Arith-metic/ ^Arith- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1310 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1312 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1313 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1314 \item[\code{x, y}] numeric or complex vectors or objects which can be ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1316 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1317 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1319 \begin{Details} \relax ! Undefined control sequence. l.1322 \code {\LinkA{Ops}{S3groupGeneric}} group generic function. (See ! Undefined control sequence. l.1322 \code{\LinkA {Ops}{S3groupGeneric}} group generic function. (See ! Undefined control sequence. l.1323 \code {\LinkA{Ops}{S3groupGeneric}} for how dispatch is computed.) ! Undefined control sequence. l.1323 \code{\LinkA {Ops}{S3groupGeneric}} for how dispatch is computed.) ! Undefined control sequence. l.1329 \code {FALSE} having value zero and \code{TRUE} having value one. ! Undefined control sequence. l.1329 \code{FALSE} having value zero and \code {TRUE} having value one. ! Undefined control sequence. l.1331 \code {1 \textasciicircum{} y} and \code{y \textasciicircum{} 0} are \... ! Undefined control sequence. l.1331 \code{1 \textasciicircum{} y} and \code {y \textasciicircum{} 0} are \... ! Undefined control sequence. l.1331 ... \code{y \textasciicircum{} 0} are \code {1}, \emph{always}. ! Undefined control sequence. l.1332 \code {x \textasciicircum{} y} should also give the proper limit resul... ! Undefined control sequence. l.1333 either (numeric) argument is \LinkA {infinite}{infinite} (one of \code... ! Undefined control sequence. l.1333 ...\LinkA{infinite}{infinite} (one of \code ] {Inf} or ! Undefined control sequence. l.1334 \code {-Inf}). ! Undefined control sequence. l.1339 For double arguments, \code {\%\%} can be subject to catastrophic loss of ! Undefined control sequence. l.1340 accuracy if \code {x} is much larger than \code{y}, and a warning is ! Undefined control sequence. l.1340 ...cy if \code{x} is much larger than \code {y}, and a warning is ! Undefined control sequence. l.1343 \code {\%\%} and \code{x \%/\% y} can be used for non-integer \code{y}, ! Undefined control sequence. l.1343 \code{\%\%} and \code {x \%/\% y} can be used for non-integer \code{y}, ! Undefined control sequence. l.1343 .../\% y} can be used for non-integer \code {y}, ! Undefined control sequence. l.1344 e.g.~\code {1 \%/\% 0.2}, but the results are subject to representation ! Undefined control sequence. l.1346 representation of \code {0.2} is a binary fraction slightly larger than ! Undefined control sequence. l.1347 \code {0.2}, the answer to \code{1 \%/\% 0.2} should be \code{4} but ! Undefined control sequence. l.1347 \code{0.2}, the answer to \code {1 \%/\% 0.2} should be \code{4} but ! Undefined control sequence. l.1347 ...er to \code{1 \%/\% 0.2} should be \code {4} but ! Undefined control sequence. l.1348 most platforms give \code {5}. ! Undefined control sequence. l.1351 \code {(-8)\textasciicircum{}(1/3)} is \code{NaN}. For \LinkA{double}... ! Undefined control sequence. l.1351 \code{(-8)\textasciicircum{}(1/3)} is \code {NaN}. For \LinkA{double}... ! Undefined control sequence. l.1351 ...ircum{}(1/3)} is \code{NaN}. For \LinkA {double}{double} inputs, \... ! Undefined control sequence. l.1351 .... For \LinkA{double}{double} inputs, \R {} makes ! Undefined control sequence. l.1353 system function \samp {pow} for the \code{\textasciicircum{}} operator... ! Undefined control sequence. l.1353 system function \samp{pow} for the \code {\textasciicircum{}} operator... ! Undefined control sequence. l.1356 Unix-alike systems the command \command {man pow} gives details of the [15 for immediate help. ... l.1362 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1364 \begin{Value} ! Undefined control sequence. l.1365 Unary \code {+} and unary \code{-} return a numeric or complex vector. ! Undefined control sequence. l.1365 Unary \code{+} and unary \code {-} return a numeric or complex vector. ! Undefined control sequence. l.1367 coercion: logical \code {x} is coerced to integer and names, dims and ! Undefined control sequence. l.1373 as necessary (with a \code {\LinkA{warning}{warning}} when they are re... ! Undefined control sequence. l.1373 as necessary (with a \code{\LinkA {warning}{warning}} when they are re... ! Undefined control sequence. l.1374 ...fractionally}). The operators are \code {+} for addition, ! Undefined control sequence. l.1375 \code {-} for subtraction, \code{*} for multiplication, \code{/} for ! Undefined control sequence. l.1375 \code{-} for subtraction, \code {*} for multiplication, \code{/} for ! Undefined control sequence. l.1375 ...tion, \code{*} for multiplication, \code {/} for ! Undefined control sequence. l.1376 division and \code {\textasciicircum{}} for exponentiation. ! Undefined control sequence. l.1378 \code {\%\%} indicates \code{x mod y} and \code{\%/\%} indicates ! Undefined control sequence. l.1378 \code{\%\%} indicates \code {x mod y} and \code{\%/\%} indicates ! Undefined control sequence. l.1378 ...\%\%} indicates \code{x mod y} and \code {\%/\%} indicates ! Undefined control sequence. l.1379 ...r division. It is guaranteed that \code {x == (x \%\% y) + y * ( ! Undefined control sequence. l.1380 ...y )} (up to rounding error) unless \code {y == 0} where the ! Undefined control sequence. l.1381 result of \code {\%\%} is \code{\LinkA{NA\_integer\_}{NA.Rul.integer.R... ! Undefined control sequence. l.1381 result of \code{\%\%} is \code {\LinkA{NA\_integer\_}{NA.Rul.integer.R... ! Undefined control sequence. l.1381 result of \code{\%\%} is \code{\LinkA {NA\_integer\_}{NA.Rul.integer.R... ! Undefined control sequence. l.1382 \code {\LinkA{NaN}{NaN}} (depending on the \code{\LinkA{typeof}{typeof... ! Undefined control sequence. l.1382 \code{\LinkA {NaN}{NaN}} (depending on the \code{\LinkA{typeof}{typeof... ! Undefined control sequence. l.1382 ...LinkA{NaN}{NaN}} (depending on the \code {\LinkA{typeof}{typeof}} o... ! Undefined control sequence. l.1382 ...aN}{NaN}} (depending on the \code{\LinkA {typeof}{typeof}} of the ! Undefined control sequence. l.1383 arguments), and for non-\LinkA {finite}{fThis is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. inite} arguments. ! Undefined control sequence. l.1387 both arguments are of type \LinkA {integer}{integer}, the type of the ... ! Undefined control sequence. l.1388 \code {/} and \code{\textasciicircum{}} is \LinkA{numeric}{numeric} an... ! Undefined control sequence. l.1388 \code{/} and \code {\textasciicircum{}} is \LinkA{numeric}{numeric} an... ! Undefined control sequence. l.1388 ... and \code{\textasciicircum{}} is \LinkA {numeric}{numeric} and for... ! Undefined control sequence. l.1390 \eqn {\pm(2^{31} - 1)}{}, ! Missing $ inserted. $ l.1390 \eqn{\pm (2^{31} - 1)}{}, ! Extra }, or forgotten $. l.1390 \eqn{\pm(2^{31} - 1)} {}, ! Undefined control sequence. l.1391 returned as \code {NA\_integer\_} with a warning). ! Missing $ inserted. $ l.1392 ! Undefined control sequence. l.1401 \code {\LinkA{tsp}{tsp}} attribute of whichever is a time series (the ... ! Undefined control sequence. l.1401 \code{\LinkA {tsp}{tsp}} attribute of whichever is a time series (the ... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1406 \end{Value} ! Missing } inserted. } l.1406 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1408 \begin{Section} {S4 methods} ! Undefined control sequence. l.1409 These operators are members of the S4 \code {\LinkA{Arith}{Arith}} gro... ! Undefined control sequence. l.1409 ...ators are members of the S4 \code{\LinkA {Arith}{Arith}} group gene... ! Undefined control sequence. l.1411 group generic (or the \code {Ops} group generic), with arguments ! Undefined control sequence. l.1412 \code {c(e1, e2)} (with \code{e2} missing for a unary operator). ! Undefined control sequence. l.1412 \code{c(e1, e2)} (with \code {e2} missing for a unary operator). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1413 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1415 \begin{Section} {Implementation limits} ! Undefined control sequence. l.1416 \R {} is dependent on OS services (and they on FPUs) for floating-point ! Undefined control sequence. l.1417 arithmetic. On all current \R {} platforms IEC 60559 (also known as IEEE ! Undefined control sequence. l.1420 (those outside the range given by \code {\LinkA{.Machine}{.Machine}}) ... ! Undefined control sequence. l.1420 ... outside the range given by \code{\LinkA {.Machine}{.Machine}}) may... ! Undefined control sequence. l.1425 possible \R {} treats them as the same, but for example direct output ! Undefined control sequence. l.1426 ...ften does not do so and may output \samp {-0.0} (and on ! Undefined control sequence. l.1428 One place in \R {} where the difference might be seen is in division by ! Undefined control sequence. l.1429 zero: \code {1/x} is \code{Inf} or \code{-Inf} depending on the sign of ! Undefined control sequence. l.1429 zero: \code{1/x} is \code {Inf} or \code{-Inf} depending on the sign of ! Undefined control sequence. l.1429 zero: \code{1/x} is \code{Inf} or \code {-Inf} depending on the sign of ! Undefined control sequence. l.1430 zero \code {x}. Another place is ! Undefined control sequence. l.1431 \code {\LinkA{identical}{identical}(0, -0, num.eq = FALSE)}. ! Undefined control sequence. l.1431 \code{\LinkA {identical}{identical}(0, -0, num.eq = FALSE)}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1432 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1434 \begin{Note} \relax ! Undefined control sequence. l.1439 e.g.~\code {`\&`(x, y)}: see the description of how ! Undefined control sequence. l.1440 argument-matching is done in \code {\LinkA{Ops}{Ops}}. ! Undefined control sequence. l.1440 argument-matching is done in \code{\LinkA {Ops}{Ops}}. [16] ! Undefined control sequence. l.1442 \code {**} is translated in the parser to \code{\textasciicircum{}}, b... ! Undefined control sequence. l.1442 ...**} is translated in the parser to \code {\textasciicircum{}}, but ... ! Undefined control sequence. l.1444 ...} (1988), pointing to the help for \code {Deprecated} but ! Undefined control sequence. l.1446 ...or 20 years, it was still accepted in \R {} in 2008. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1447 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1449 \begin{References} \relax ! Undefined control sequence. l.1455 ...rithmetic} ACM Computing Surveys, \bold {23(1)}.\\{} ! Undefined control sequence. l.1457 \url {http://www.validlab.com/goldberg/paper.ps} ! Undefined control sequence. l.1458 Extended PDF version at \url {http://www.validlab.com/goldberg/paper.pdf} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1460 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1462 \begin{SeeAlso} \relax ! Undefined control sequence. l.1463 \code {\LinkA{sqrt}{sqrt}} for miscellaneous and \code{\LinkA{Special}... ! Undefined control sequence. l.1463 \code{\LinkA {sqrt}{sqrt}} for miscellaneous and \code{\LinkA{Special}... ! Undefined control sequence. l.1463 ...sqrt}{sqrt}} for miscellaneous and \code {\LinkA{Special}{Special}}... ! Undefined control sequence. l.1463 ...qrt}} for miscellaneous and \code{\LinkA {Special}{Special}} for sp... ! Undefined control sequence. l.1466 \code {\LinkA{Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.1466 \code{\LinkA {Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.1468 \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for matrix ... ! Undefined control sequence. l.1468 \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for matrix ... ! Undefined control sequence. l.1468 \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for matrix ... ! Undefined control sequence. l.1468 \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}} for matrix ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1469 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1471 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1472 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1478 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1479 \end{Examples} ! Undefined control sequence. l.1480 \HeaderA {array}{Multi-way Arrays}{array} ! Undefined control sequence. l.1481 \aliasA {as.array}{array}{as.array} ! Undefined control sequence. l.1482 \methaliasA {as.array.default}{array}{as.array.default} ! Undefined control sequence. l.1483 \aliasA {is.array}{array}{is.array} ! Undefined control sequence. l.1484 \keyword {array}{array} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1486 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1488 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1490 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1496 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1498 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1499 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1500 \item[\code{data}] a vector (including a list or \code{\LinkA{express... ! Undefined control sequence. l.1500 ...ta}] a vector (including a list or \code {\LinkA{expression}{expres... ! Undefined control sequence. l.1500 ...vector (including a list or \code{\LinkA {expression}{expression}} ! Undefined control sequence. l.1502 are coerced by \code {\LinkA{as.vector}{as.vector}}. ! Undefined control sequence. l.1502 are coerced by \code{\LinkA {as.vector}{as.vector}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1503 \item[\code{dim}] the dim attribute for the array to be created, that... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1506 \item[\code{dimnames}] either \code{NULL} or the names for the dimens... ! Undefined control sequence. l.1506 \item[\code{dimnames}] either \code {NULL} or the names for the dimens... ! Undefined control sequence. l.1508 dimension, either \code {NULL} or a character vector of the length ! Undefined control sequence. l.1509 given by \code {dim} for that dimension. The list can be named, and ! Undefined control sequence. l.1512 \code {NULL}s to the length required. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1513 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.1513 \item[\code{x}] an \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1514 \item[\code{...}] additional arguments to be passed to or from methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1515 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1516 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1518 \begin{Details} \relax ! Undefined control sequence. l.1519 An array in \R {} can have one, two or more dimensions. It is simply a ! Undefined control sequence. l.1520 ...r which is stored with additional \LinkA {attributes}{attributes} g... ! Undefined control sequence. l.1521 dimensions (attribute \code {"dim"}) and optionally names for those ! Undefined control sequence. l.1522 dimensions (attribute \code {"dimnames"}). ! Undefined control sequence. l.1524 ...ional array is the same thing as a \code {\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.1524 ...rray is the same thing as a \code{\LinkA {matrix}{matrix}}. ! Undefined control sequence. l.1527 differently by some functions: \code {\LinkA{str}{str}} does distinguish ! Undefined control sequence. l.1527 differently by some functions: \code{\LinkA {str}{str}} does distinguish ! Undefined control sequence. l.1528 them in recent versions of \R {}. ! Undefined control sequence. l.1530 The \code {"dim"} attribute is an integer vector of length one or more ! Undefined control sequence. l.1534 The \code {"dimnames"} attribute is optional: if present it is a list ! Undefined control sequence. l.1535 ...mponent for each dimension, either \code {NULL} or a ! Undefined control sequence. l.1537 \code {"dim"} attribute for that dimension. ! Undefined control sequence. l.1539 \code {is.array} is a \LinkA{primitive}{primitive} function. ! Undefined control sequence. l.1539 \code{is.array} is a \LinkA {primitive}{primitive} function. ! Undefined control sequence. l.1541 For a list array, the \code {print} methods prints entries of length ! Undefined control sequence. l.1542 not one in the form \samp {integer,7} indicating the type and length. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1543 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1545 \begin{Value} ! Undefined control sequence. l.1546 \code {array} returns an array with the extents specified in \code{dim} ! Undefined control sequence. l.1546 ...rray with the extents specified in \code {dim} ! Undefined control sequence. l.1547 and naming information in \code {dimnames}. The values in \code{data}... ! Undefined control sequence. l.1547 ...in \code{dimnames}. The values in \code {data} are ! Undefined control sequence. l.1549 ... If there are too few elements in \code {data} to fill the array, ! Undefined control sequence. l.1550 then the elements in \code {data} are recycled. If \code{data} has ! Undefined control sequence. l.1550 ...s in \code{data} are recycled. If \code {data} has ! Undefined control sequence. l.1551 length zero, \code {NA} of an appropriate type is used for atomic ! Undefined control sequence. l.1552 vectors (\code {0} for raw vectors) and \code{NULL} for lists. ! Undefined control sequence. l.1552 ...ors (\code{0} for raw vectors) and \code {NULL} for lists. [17] ! Undefined control sequence. l.1554 Unlike \code {\LinkA{matrix}{matrix}}, \code{array} does not currently... ! Undefined control sequence. l.1554 Unlike \code{\LinkA {matrix}{matrix}}, \code{array} does not currently... ! Undefined control sequence. l.1554 Unlike \code{\LinkA{matrix}{matrix}}, \code {array} does not currently... ! Undefined control sequence. l.1555 any attributes left by \code {as.vector} from a classed list ! Undefined control sequence. l.1556 \code {data}, so can return a list array with a class attribute. ! Undefined control sequence. l.1558 \code {as.array} is a generic function for coercing to arrays. The ! Undefined control sequence. l.1559 default method does so by attaching a \code {\LinkA{dim}{dim}} attribu... ! Undefined control sequence. l.1559 ...thod does so by attaching a \code{\LinkA {dim}{dim}} attribute to ! Undefined control sequence. l.1560 it. It also attaches \code {\LinkA{dimnames}{dimnames}} if \code{x} has ! Undefined control sequence. l.1560 it. It also attaches \code{\LinkA {dimnames}{dimnames}} if \code{x} has ! Undefined control sequence. l.1560 ...ode{\LinkA{dimnames}{dimnames}} if \code {x} has ! Undefined control sequence. l.1561 \code {\LinkA{names}{names}}. The sole purpose of this is to make it ... ! Undefined control sequence. l.1561 \code{\LinkA {names}{names}}. The sole purpose of this is to make it ... ! Undefined control sequence. l.1562 to access the \code {dim[names]} attribute at a later time. ! Undefined control sequence. l.1564 \code {is.array} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.1564 \code{is.array} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.1564 ...e{is.array} returns \code{TRUE} or \code {FALSE} depending on ! Undefined control sequence. l.1565 ... argument is an array (i.e., has a \code {dim} attribute of ! Undefined control sequence. l.1567 specific classes of objects, see \LinkA {InternalMethods}{InternalMeth... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1568 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1570 \begin{Note} \relax ! Undefined control sequence. l.1571 \code {is.array} is a \LinkA{primitive}{primitive} function. ! Undefined control sequence. l.1571 \code{is.array} is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1572 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1574 \begin{References} \relax ! LaTeX Error: \begin{document} ended byentering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]: \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1578 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1580 \begin{SeeAlso} \relax ! Undefined control sequence. l.1581 \code {\LinkA{aperm}{aperm}}, \code{\LinkA{matrix}{matrix}}, ! Undefined control sequence. l.1581 \code{\LinkA {aperm}{aperm}}, \code{\LinkA{matrix}{matrix}}, ! Undefined control sequence. l.1581 \code{\LinkA{aperm}{aperm}}, \code {\LinkA{matrix}{matrix}}, ! Undefined control sequence. l.1581 \code{\LinkA{aperm}{aperm}}, \code{\LinkA {matrix}{matrix}}, ! Undefined control sequence. l.1582 \code {\LinkA{dim}{dim}}, \code{\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.1582 \code{\LinkA {dim}{dim}}, \code{\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.1582 \code{\LinkA{dim}{dim}}, \code {\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.1582 \code{\LinkA{dim}{dim}}, \code{\LinkA {dimnames}{dimnames}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1583 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1585 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1586 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1588 array(1:3, c(2,4)) # recycle 1:3 "2 2/3 times" ! You can't use `macro parameter character #' in horizontal mode. l.1589 # [,1] [,2] [,3] [,4] ! You can't use `macro parameter character #' in horizontal mode. l.1590 # [1,] 1 3 2 1 ! You can't use `macro parameter character #' in horizontal mode. l.1591 # [2,] 2 1 3 2 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1592 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1593 \end{Examples} ! Undefined control sequence. l.1594 \HeaderA {as.data.frame}{Coerce to a Data Frame}{as.data.frame} ! Undefined control sequence. l.1595 \methaliasA {as.data.frame.array}{as.data.frame}{as.data.frame.array} ! Undefined control sequence. l.1596 \methaliasA {as.data.frame.AsIs}{as.data.frame}{as.data.frame.AsIs} ! Undefined control sequence. l.1597 \methaliasA {as.data.frame.character}{as.data.frame}{as.data.frame.cha... ! Undefined control sequence. l.1598 \methaliasA {as.data.frame.complex}{as.data.frame}{as.data.frame.complex} ! Undefined control sequence. l.1599 \methaliasA {as.data.frame.data.frame}{as.data.frame}{as.data.frame.da... ! Undefined control sequence. l.1600 \methaliasA {as.data.frame.default}{as.data.frame}{as.data.frame.default} ! Undefined control sequence. l.1601 \methaliasA {as.data.frame.difftime}{as.data.frame}{as.data.frame.diff... ! Undefined control sequence. l.1602 \methaliasA {as.data.frame.factor}{as.data.frame}{as.data.frame.factor} ! Undefined control sequence. l.1603 \methaliasA {as.data.frame.integer}{as.data.frame}{as.data.frame.integer} ! Undefined control sequence. l.1604 \methaliasA {as.data.frame.list}{as.data.frame}{as.data.frame.list} ! Undefined control sequence. l.1605 \methaliasA {as.data.frame.logical}{as.data.frame}{as.data.frame.logical} ! Undefined control sequence. l.1606 \methaliasA {as.data.frame.matrix}{as.data.frame}{as.data.frame.matrix} ! Undefined control sequence. l.1607 \methaliasA {as.data.frame.model.matrix}{as.data.frame}{as.data.frame.... ! Undefined control sequence. l.1608 \methaliasA {as.data.frame.noquote}{as.data.frame}{as.data.frame.noquote} ! Undefined control sequence. l.1609 \methaliasA {as.data.frame.numeric}{as.data.frame}{as.data.frame.numeric} ! Undefined control sequence. l.1610 \methaliasA {as.data.frame.ordered}{as.data.frame}{as.data.frame.ordered} ! Undefined control sequence. l.1611 \methaliasA {as.data.frame.raw}{as.data.frame}{as.data.frame.raw} ! Undefined control sequence. l.1612 \methaliasA {as.data.frame.ts}{as.data.frame}{as.data.frame.ts} ! Undefined control sequence. l.1613 \methaliasA {as.data.frame.vector}{as.data.frame}{as.data.frame.vector} ! Undefined control sequence. l.1614 \aliasA {is.data.frame}{as.data.frame}{is.data.frame} ! Undefined control sequence. l.1615 \keyword {classes}{as.data.frame} ! Undefined control sequence. l.1616 \keyword {methods}{as.data.frame} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1618 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1620 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1622 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 Frameas.data.frame as.data.frame.arrayas.data.frameas.data.fram e.array Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.AsIsas.data.frameas.data.frame.AsIs Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.characteras.data.frameas.data.frame.character Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.complexas.data.frameas.data.frame.complex Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.data.frameas.data.frameas.data.frame.data.frame Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.defaultas.data.frameas.data.frame.default Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cm pdf,r/m/n/10 as.data.frame.difftimeas.data.frameas.data.frame.difftime Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.factoras.data.frameas.data.frame.factor Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.integeras.data.frameas.data.frame.integer Overfull \hbox (102.83446pt too wide) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.listas.data.frameas.data.frame.list as.data.frame .logicalas.data.frameas.data.frame.logical Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.matrixas.data.frameas.data.frame.matrix Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.model.matrixas.data.frameas.data.frame.model.matr ix Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.noquoteas.data.frameas.data.frame.noquote Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.numericas.data.frameas.data.frame.numeric Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.orderedas.data.frameas.data.frame.ordered Overfull \hbox (67.88988pt too wide) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.rawas.data.frameas.data.frame.raw as.data.frame.t sas.data.frameas.data.frame.ts Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 as.data.frame.vectoras.data.frameas.data.frame.vector Underfull \hbox (badness 10000) in paragraph at lines 1564--1623 \OT1/cmr/m/n/10 is.data.frameas.data.frameis.data.frame class-esas.data.frame m eth-od- Overfull \hbox (64.49643pt too wide) in paragraph at lines 1640--1640 [] \OT1/cmtt/m/n/10 cut.names = FALSE, col.names = names(x), fix.e mpty.names = TRUE,[] [18 fonts,] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1641 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1643 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1644 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1645 \item[\code{x}] any \R{} object. ! Undefined control sequence. l.1645 \item[\code{x}] any \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1646 \item[\code{row.names}] \code{NULL} or a character vector giving the row ! Undefined control sequence. l.1646 \item[\code{row.names}] \code {NULL} or a character vector giving the row ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1648 \item[\code{optional}] logical. If \code{TRUE}, setting row names and ! Undefined control sequence. l.1648 \item[\code{optional}] logical. If \code {TRUE}, setting row names and ! Undefined control sequence. l.1650 \code {\LinkA{make.names}{make.names}}) is optional. Note that all of... ! Undefined control sequence. l.1650 \code{\LinkA {make.names}{make.names}}) is optional. Note that all of... ! Undefined control sequence. l.1650 ...mes}}) is optional. Note that all of \R {}'s ! Undefined control sequence. l.1651 \pkg {base} package \code{as.data.frame()} methods use ! Undefined control sequence. l.1651 \pkg{base} package \code {as.data.frame()} methods use ! Undefined control sequence. l.1652 \code {optional} only for column names treatment, basically with the ! Undefined control sequence. l.1653 meaning of \code {\LinkA{data.frame}{data.frame}(*, check.names = !opt... ! Undefined control sequence. l.1653 meaning of \code{\LinkA {data.frame}{data.frame}(*, check.names = !opt... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1654 \item[\code{...}] additional arguments to be passed to or from methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1655 \item[\code{stringsAsFactors}] logical: should the character vector b... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1658 \item[\code{cut.names}] logical or integer; indicating if column name... ! Undefined control sequence. l.1659 more than 256 (or \code {cut.names} if that is numeric) characters ! Undefined control sequence. l.1660 ... the last 6 characters replaced by \code {" ..."}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1661 \item[\code{col.names}] (optional) character vector of column names. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1662 \item[\code{fix.empty.names}] logical indicating if empty column name... ! Undefined control sequence. l.1663 \code {""} should be fixed up (in \code{\LinkA{data.frame}{data.frame}... ! Undefined control sequence. l.1663 \code{""} should be fixed up (in \code {\LinkA{data.frame}{data.frame}... ! Undefined control sequence. l.1663 ...{""} should be fixed up (in \code{\LinkA {data.frame}{data.frame}})... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1664 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1665 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1667 \begin{Details} \relax ! Undefined control sequence. l.1668 \code {as.data.frame} is a generic function with many methods, and ! Undefined control sequence. l.1670 as vectors, often a copy of \code {as.data.frame.vector} will work ! Undefined control sequence. l.1676 a method for \code {as.data.frame}: two examples are ! Undefined control sequence. l.1677 matrices of class \code {"\LinkA{model.matrix}{model.matrix}"} (which are ! Undefined control sequence. l.1677 matrices of class \code{"\LinkA {model.matrix}{model.matrix}"} (which are ! Undefined control sequence. l.1679 \code {"\LinkA{POSIXlt}{POSIXlt}"} which are coerced to class ! Undefined control sequence. l.1679 \code{"\LinkA {POSIXlt}{POSIXlt}"} which are coerced to class ! Undefined control sequence. l.1680 \code {"\LinkA{POSIXct}{POSIXct}"}. ! Undefined control sequence. l.1680 \code{"\LinkA {POSIXct}{POSIXct}"}. ! Undefined control sequence. l.1689 by \code {\LinkA{I}{I}}. ! Undefined control sequence. l.1689 by \code{\LinkA {I}{I}}. ! Undefined control sequence. l.1691 ...is supplied, all classes preceding \code {"data.frame"} ! Undefined control sequence. l.1694 If \code {row.names = NULL}, row names are constructed from the names ! Undefined control sequence. l.1695 or dimnames of \code {x}, otherwise are the integer sequence ! Undefined control sequence. l.1697 ...removed from vector columns unless \code {\LinkA{I}{I}}. ! Undefined control sequence. l.1697 ... from vector columns unless \code{\LinkA {I}{I}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1698 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1700 \begin{Value} ! Undefined control sequence. l.1701 \code {as.data.frame} returns a data frame, normally with all row names ! Undefined control sequence. l.1702 \code {""} if \code{optional = TRUE}. ! Undefined control sequence. l.1702 \code{""} if \code {optional = TRUE}. ! Undefined control sequence. l.1704 \code {is.data.frame} returns \code{TRUE} if its argument is a data ! Undefined control sequence. l.1704 \code{is.data.frame} returns \code {TRUE} if its argument is a data ! Undefined control sequence. l.1705 frame (that is, has \code {"data.frame"} amongst its classes) ! Undefined control sequence. l.1706 and \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1707 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1709 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1714 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1716 \begin{SeeAlso} \relax ! Undefined control sequence. l.1717 \code {\LinkA{data.frame}{data.frame}}, \code{\LinkA{as.data.frame.tab... ! Undefined control sequence. l.1717 \code{\LinkA {data.frame}{data.frame}}, \code{\LinkA{as.data.frame.tab... ! Undefined control sequence. l.1717 ...e{\LinkA{data.frame}{data.frame}}, \code {\LinkA{as.data.frame.tabl... ! Undefined control sequence. l.1717 ...A{data.frame}{data.frame}}, \code{\LinkA {as.data.frame.table}{as.d... ! Undefined control sequence. l.1718 \code {table} method (which has additional arguments if called directly). ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1719 \end{SeeAlso} ! Undefined control sequence. l.1720 \HeaderA {as.Date}{Date Conversion Functions to and from Character}{as... ! Undefined control sequence. l.1721 \aliasA {as.character.Date}{as.Date}{as.character.Date} ! Undefined control sequence. l.1722 \methaliasA {as.Date.character}{as.Date}{as.Date.character} ! Undefined control sequence. l.1723 \methaliasA {as.Date.date}{as.Date}{as.Date.date} ! Undefined control sequence. l.1724 \methaliasA {as.Date.dates}{as.Date}{as.Date.dates} ! Undefined control sequence. l.1725 \methaliasA {as.Date.default}{as.Date}{as.Date.default} ! Undefined control sequence. l.1726 \methaliasA {as.Date.factor}{as.Date}{as.Date.factor} ! Undefined control sequence. l.1727 \methaliasA {as.Date.numeric}{as.Date}{as.Date.numeric} ! Undefined control sequence. l.1728 \methaliasA {as.Date.POSIXct}{as.Date}{as.Date.POSIXct} ! Undefined control sequence. l.1729 \methaliasA {as.Date.POSIXlt}{as.Date}{as.Date.POSIXlt} ! Undefined control sequence. l.1730 \aliasA {format.Date}{as.Date}{format.Date} ! Undefined control sequence. l.1731 \keyword {utilities}{as.Date} ! Undefined control sequence. l.1732 \keyword {chron}{as.Date} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1734 \begin{Description} \relax ! Undefined control sequence. l.1736 class \code {"Date"} representing calendar dates. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1737 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1739 \begin{Usage} Underfull \hbox (badness 5908) in paragraph at lines 1704--1740 \OT1/cmr/m/n/10 to and from Char-ac-teras.Date as.character.Dateas.Dateas.chara cter.Date Underfull \hbox (badness 10000) in paragraph at lines 1704--1740 \OT1/cmr/m/n/10 as.Date.characteras.Dateas.Date.character as.Date.dateas.Dateas .Date.date Underfull \hbox (badness 10000) in paragraph at lines 1704--1740 \OT1/cmr/m/n/10 as.Date.datesas.Dateas.Date.dates as.Date.defaultas.Dateas.Date .default Underfull \hbox (badness 10000) in paragraph at lines 1704--1740 \OT1/cmr/m/n/10 as.Date.factoras.Dateas.Date.factor as.Date.numericas.Dateas.Da te.numeric Overfull \hbox (19.50075pt too wide) in paragraph at lines 1704--1740 \OT1/cmr/m/n/10 as.Date.POSIXctas.Dateas.Date.POSIXct as.Date.POSIXltas.Dateas. Date.POSIXlt [19] page headings, tables, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1755 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1757 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1758 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1759 \item[\code{x}] An object to be converted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1760 \item[\code{format}] A character string. If not specified, it will try ! Undefined control sequence. l.1761 \code {"\%Y-\%m-\%d"} then \code{"\%Y/\%m/\%d"} on the first ! Undefined control sequence. l.1761 \code{"\%Y-\%m-\%d"} then \code {"\%Y/\%m/\%d"} on the first ! Undefined control sequence. l.1762 non-\code {NA} element, and give an error if neither works. ! Undefined control sequence. l.1763 Otherwise, the processing is via \code {\LinkA{strptime}{strptime}} ! Undefined control sequence. l.1763 ...wise, the processing is via \code{\LinkA {strptime}{strptime}} Underfull \hbox (badness 2080) in paragraph at lines 1760--1764 []\OT1/cmr/m/n/10 A char-ac-ter string. If not spec-i-fied, it will try "%Y-%m- %d" then ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1764 \item[\code{origin}] a Date object, or something which can be coerced by ! Undefined control sequence. l.1765 \code {as.Date(origin, ...)} to such an object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1766 \item[\code{tz}] a time zone name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1767 \item[\code{...}] Further arguments to be passed from or to other met... ! Undefined control sequence. l.1768 including \code {format} for \code{as.character} and \code{as.Date} ! Undefined control sequence. l.1768 including \code{format} for \code {as.character} and \code{as.Date} ! Undefined control sequence. l.1768 ...ormat} for \code{as.character} and \code {as.Date} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX C conditionals, indexing,ompanion for explanation. Type H for immediate help. ... l.1770 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1771 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1773 \begin{Details} \relax ! Undefined control sequence. l.1774 ...or re-cycling rules are applied to \code {x} and ! Undefined control sequence. l.1775 \code {format} so the answer will be of length that of the longer of the ! Undefined control sequence. l.1782 The \code {as.Date} methods accept character strings, factors, logical ! Undefined control sequence. l.1783 \code {NA} and objects of classes \code{"\LinkA{POSIXlt}{POSIXlt}"} and ! Undefined control sequence. l.1783 \code{NA} and objects of classes \code {"\LinkA{POSIXlt}{POSIXlt}"} and ! Undefined control sequence. l.1783 ...NA} and objects of classes \code{"\LinkA {POSIXlt}{POSIXlt}"} and ! Undefined control sequence. l.1784 \code {"\LinkA{POSIXct}{POSIXct}"}. (The last is converted to days by... ! Undefined control sequence. l.1784 \code{"\LinkA {POSIXct}{POSIXct}"}. (The last is converted to days by... ! Undefined control sequence. l.1786 ...fault UTC.) Also objects of class \code {"date"} (from ! Undefined control sequence. l.1787 package \pkg {\LinkA{date}{date}}) and \code{"dates"} (from ! Undefined control sequence. l.1787 package \pkg{\LinkA {date}{date}}) and \code{"dates"} (from ! Undefined control sequence. l.1787 package \pkg{\LinkA{date}{date}}) and \code {"dates"} (from ! Undefined control sequence. l.1788 package \pkg {\LinkA{chron}{chron}}). Character strings are processed ! Undefined control sequence. l.1788 package \pkg{\LinkA {chron}{chron}}). Character strings are processed ! Undefined control sequence. l.1792 \code {as.Date} will accept numeric data (the number of days since an ! Undefined control sequence. l.1793 epoch), but \emph{only} if \code {origin} is supplied. ! Undefined control sequence. l.1795 The \code {format} and \code{as.character} methods ignore any ! Undefined control sequence. l.1795 The \code{format} and \code {as.character} methods ignore any ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1797 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1799 \begin{Value} ! Undefined control sequence. l.1800 The \code {format} and \code{as.character} methods return a character ... ! Undefined control sequence. l.1800 The \code{format} and \code {as.character} methods return a character ... ! Undefined control sequence. l.1801 representing the date. \code {NA} dates are returned as \code{NA\_cha... ! Undefined control sequence. l.1801 .... \code{NA} dates are returned as \code {NA\_character\_}. ! Undefined control sequence. l.1803 The \code {as.Date} methods return an object of class \code{"\LinkA{Da... ! Undefined control sequence. l.1803 ... methods return an object of class \code {"\LinkA{Date}{Date}"}. ! Undefined control sequence. l.1803 ... return an object of class \code{"\LinkA {Date}{Date}"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1804 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1806 \begin{Section} {Conversion from other Systems} [20 sectioning, toc,] environments, defuns, macros, ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1828 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1830 \begin{Note} \relax ! Undefined control sequence. l.1832 standard which expresses a day as \code {"2001-02-03"}. ! Undefined control sequence. l.1838 the date is reported as \code {NA}. Unfortunately some common ! Undefined control sequence. l.1839 implementations (such as \samp {glibc}) are unreliable and guess at the ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1843 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1845 \begin{References} \relax ! Undefined control sequence. l.1851 \url {http://www.qsl.net/g1smd/isopdf.htm}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1852 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1854 \begin{SeeAlso} \relax ! Undefined control sequence. l.1855 \LinkA {Date}{Date} for details of the date class; ! Undefined control sequence. l.1856 \code {\LinkA{locales}{locales}} to query or set a locale. ! Undefined control sequence. l.1856 \code{\LinkA {locales}{locales}} to query or set a locale. ! Undefined control sequence. l.1858 Your system's help pages on \code {strftime} and \code{strptime} to see ! Undefined control sequence. l.1858 ... help pages on \code{strftime} and \code {strptime} to see ! Undefined control sequence. l.1860 for \code {strptime}: code based on \samp{glibc} is used (with ! Undefined control sequence. l.1860 for \code{strptime}: code based on \samp {glibc} is used (with ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1864 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1866 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1867 \begin{ExampleCode} ! You can't use `macr cross references, insertions,o parameter character #' in vertical mode. l.1869 # # locale-specific version of the date ! You can't use `macro parameter character #' in vertical mode. l.1869 ## locale-specific version of the date ! You can't use `macro parameter character #' in vertical mode. l.1872 # # read in date info in format 'ddmmmyyyy' ! You can't use `macro parameter character #' in vertical mode. l.1872 ## read in date info in format 'ddmmmyyyy' ! You can't use `macro parameter character #' in horizontal mode. l.1873 # # This will give NA(s) in some locales; setting the C locale ! You can't use `macro parameter character #' in horizontal mode. l.1873 ## This will give NA(s) in some locales; setting the C locale ! You can't use `macro parameter character #' in horizontal mode. l.1874 # # as in the commented lines will overcome this on most systems. ! You can't use `macro parameter character #' in horizontal mode. l.1874 ## as in the commented lines will overcome this on most systems. ! You can't use `macro parameter character #' in horizontal mode. l.1875 # # lct <- Sys.getlocale("LC_TIME"); Sys.setlocale("LC_TIME", "C") ! You can't use `macro parameter character #' in horizontal mode. l.1875 ## lct <- Sys.getlocale("LC_TIME"); Sys.setlocale("LC_TIME", "C") ! Missing $ inserted. $ l.1875 ## lct <- Sys.getlocale("LC_ TIME"); Sys.setlocale("LC_TIME", "C") ! You can't use `macro parameter character #' in math mode. l.1878 # # Sys.setlocale("LC_TIME", lct) ! You can't use `macro parameter character #' in math mode. l.1878 ## Sys.setlocale("LC_TIME", lct) ! Missing $ inserted. $ l.1880 Underfull \hbox (badness 10000) in paragraph at lines 1872--1880 []\OT1/cmr/m/n/10 read in date info in for-mat 'ddm-m-myyyy' This will give Underfull \hbox (badness 7832) in paragraph at lines 1872--1880 \OT1/cmr/m/n/10 NA(s) in some lo-cales; set-ting the C lo-cale as in the com- Underfull \hbox (badness 7963) in paragraph at lines 1872--1880 \OT1/cmr/m/n/10 mented lines will over-come this on most sys-tems. lct <- Underfull \hbox (badness 10000) in paragraph at lines 1872--1880 \OT1/cmr/m/n/10 Sys.getlocale("LC$[]\OML/cmm/m/it/10 IME\OT1/cmr/m/n/10 "); \OM L/cmm/m/it/10 Sys:setlocale\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 LC[]IME\OT1/cmr/m /n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 C\OT1/cmr/m/n/10 ") \OML/cmm/m/it/10 x < Underfull \hbox (badness 10000) in paragraph at lines 1872--1880 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 ("1\OML/cmm/m/it/10 jan\O T1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "2\OML/cmm/m/it/10 jan\OT 1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "31\OML/cmm/m/it/10 mar\OT 1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "30\OML/cmm/m/it/10 jul\OT 1/cmr/m/n/10 1960")\OML/cmm/m/it/10 z < ! You can't use `macro parameter character #' in vertical mode. l.1881 # # read in date/time info in format 'm/d/y' ! You can't use `macro parameter character #' in vertical mode. l.1881 ## read in date/time info in format 'm/d/y' ! You can't use `macro parameter character #' in vertical mode. l.1885 # # date given as number of days since 1900-01-01 (a date in 1989) ! You can't use `macro parameter character #' in vertical mode. l.1885 ## date given as number of days since 1900-01-01 (a date in 1989) ! You can't use `macro parameter character #' in horizontal mode. l.1887 # # Excel is said to use 1900-01-01 as day 1 (Windows default) or ! You can't use `macro parameter character #' in horizontal mode. l.1887 ## Excel is said to use 1900-01-01 as day 1 (Windows default) or ! You can't use `macro parameter character #' in horizontal mode. l.1888 # # 1904-01-01 as day 0 (Mac default), but this is complicated by Excel ! You can't use `macro parameter character #' in horizontal mode. l.1888 ## 1904-01-01 as day 0 (Mac default), b (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.texut this is complicated by Excel ! You can't use `macro parameter character #' in horizontal mode. l.1889 # # incorrectly treating 1900 as a leap year. ! You can't use `macro parameter character #' in horizontal mode. l.1889 ## incorrectly treating 1900 as a leap year. ! You can't use `macro parameter character #' in horizontal mode. l.1890 # # So for dates (post-1901) from Windows Excel ! You can't use `macro parameter character #' in horizontal mode. l.1890 ## So for dates (post-1901) from Windows Excel ! You can't use `macro parameter character #' in horizontal mode. l.1891 as.Date(35981, origin = "1899-12-30") # 1998-07-05 ! You can't use `macro parameter character #' in horizontal mode. l.1892 # # and Mac Excel ! You can't use `macro parameter character #' in horizontal mode. l.1892 ## and Mac Excel ! You can't use `macro parameter character #' in horizontal mode. l.1893 as.Date(34519, origin = "1904-01-01") # 1998-07-05 ! You can't use `macro parameter character #' in horizontal mode. l.1894 # # (these values come from http://support.microsoft.com/kb/214330) ! You can't use `macro parameter character #' in horizontal mode. l.1894 ## (these values come from http://support.microsoft.com/kb/214330) Underfull \hbox (badness 2582) in paragraph at lines 1885--1895 []\OT1/cmr/m/n/10 date given as num-ber of days since 1900-01-01 (a date in 198 9) [21 This is `epsf.tex' v2.7.4 <14 February 2011> ) localization,] ! You can't use `macro parameter character #' in vertical mode. l.1896 # # Experiment shows that Matlab's origin is 719529 days before ours, ! You can't use `macro parameter character #' in vertical mode. l.1896 ## Experiment shows that Matlab's origin is 719529 days before ours, ! You can't use `macro parameter character #' in horizontal mode. l.1897 # # (it takes the non-existent 0000-01-01 as day 1) ! You can't use `macro parameter character #' in horizontal mode. l.1897 ## (it takes the non-existent 0000-01-01 as day 1) ! You can't use `macro parameter character #' in horizontal mode. l.1898 # # so Matlab day 734373 can be imported as ! You can't use `macro parameter character #' in horizontal mode. l.1898 ## so Matlab day 734373 can be imported as ! You can't use `macro parameter character #' in horizontal mode. l.1899 ...34373, origin = "1970-01-01") - 719529 # 2010-08-23 ! You can't use `macro parameter character #' in horizontal mode. l.1900 # # (value from ! You can't use `macro parameter character #' in horizontal mode. l.1900 ## (value from ! You can't use `macro parameter character #' in horizontal mode. l.1901 # # http://www.mathworks.de/de/help/matlab/matlab_prog/represent-date-... ! You can't use `macro parameter character #' in horizontal mode. l.1901 ## http://www.mathworks.de/de/help/matlab/matlab_prog/represent-date-... ! Missing $ inserted. $ l.1901 .../www.mathworks.de/de/help/matlab/matlab_ prog/represent-date-and-ti... ! Missing $ inserted. $ l.1902 Underfull \hbox (badness 3701) in paragraph at lines 1896--1902 \OT1/cmr/m/n/10 http://www.mathworks.de/de/help/matlab/matlab$[]\OML/cmm/m/it/1 0 rog=represent \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 date \OMS/cmsy/m/n/10 ^^@ ! You can't use `macro parameter character #' in vertical mode. l.1903 # # Time zone effect ! You can't use `macro parameter character #' in vertical mode. l.1903 ## Time zone effect ! You can't use `macro parameter character #' in horizontal mode. l.1904 z <- ISOdate(2010, 04, 13, c(0,12)) # midnight and midday UTC ! You can't use `macro parameter character #' in horizontal mode. l.1905 as.Date(z) # in UTC ! You can't use `macro parameter character #' in horizontal mode. l.1906 # # these time zone names are common ! You can't use `macro parameter character #' in horizontal mode. l.1906 ## these time zone names are common ! You can't use `macro parameter character #' in horizontal mode. l.1908 as.Date(z, tz = "HST") # Hawaii ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1909 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1910 \end{Examples} ! Undefined control sequence. l.1911 \HeaderA {as.environment}{ Coerce to an Environment Object }{as.enviro... ! Undefined control sequence. l.1912 \keyword {data}{as.environment} ! Undefined control sequence. l.1913 \keyword {environment}{as.environment} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1915 \begin{Description} \relax ! Undefined con formatting, and turning on texinfo input format.)trol sequence. l.1916 A generic function coercing an \R {} object to an ! Undefined control sequence. l.1917 \code {\LinkA{environment}{environment}}. A number or a character str... ! Undefined control sequence. l.1917 \code{\LinkA {environment}{environment}}. A number or a character str... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1919 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1921 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1925 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1927 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1928 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1929 \item[\code{x}] an \R{} object to convert. If it is already an ! Undefined control sequence. l.1929 \item[\code{x}] an \R {} object to convert. If it is already an ! Undefined control sequence. l.1932 is \code {-1}, the environment it is called from. If ! Undefined control sequence. l.1936 If it is a list, the equivalent of \code {\LinkA{list2env}{list2env}(x, ! Undefined control sequence. l.1936 ...s a list, the equivalent of \code{\LinkA {list2env}{list2env}(x, ! Undefined control sequence. l.1939 If \code {\LinkA{is.object}{is.object}(x)} is true and it has a \code{... ! Undefined control sequence. l.1939 If \code{\LinkA {is.object}{is.object}(x)} is true and it has a \code{... ! Undefined control sequence. l.1939 ...s.object}(x)} is true and it has a \code {\LinkA{class}{class}} ! Undefined control sequence. l.1939 ...t}(x)} is true and it has a \code{\LinkA {class}{class}} ! Undefined control sequence. l.1940 for which an \code {as.environment} method is found, that is used. Underfull \hbox (badness 1565) in paragraph at lines 1939--1941 []\OT1/cmr/m/n/10 If is.objectis.object(x) is true and it has a class-class for which an ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1942 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex) l.1943 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1945 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1947 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1949 \begin{Note} \relax ! Undefined control sequence. l.1950 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1951 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1953 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1955 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1957 \begin{SeeAlso} \relax ! Undefined control sequence. l.1958 \code {\LinkA{environment}{environment}} for creation and manipulation, ! Undefined control sequence. l.1958 \code{\LinkA {environment}{environment}} for creation and manipulation, ! Undefined control sequence. l.1959 \code {\LinkA{search}{search}}; \code{\LinkA{list2env}{list2env}}. ! Undefined control sequence. l.1959 \code{\LinkA {search}{search}}; \code{\LinkA{list2env}{list2env}}. ! Undefined control sequence. l.1959 \code{\LinkA{search}{search}}; \code {\LinkA{list2env}{list2env}}. ! Undefined control sequence. l.1959 \code{\LinkA{search}{search}}; \code{\LinkA {list2env}{list2env}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1960 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1962 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1963 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1964 as.environment(1) # # the global environment ! You can't use `macro parameter character #' in horizontal mode. l.1964 as.environment(1) ## the global environment ! You can't use `macro parameter character #' in horizontal mode. l.1965 identical(globalenv(), as.environment(1)) # # is TRUE ! You can't use `macro parameter character #' in horizontal mode. l.1965 ...tical(globalenv(), as.environment(1)) ## is TRUE ! You can't use `macro parameter character #' in horizontal mode. l.1966 try( # # <<- stats need not be attached ! You can't use `macro parameter character #' in horizontal mode. l.1966 try( ## <<- stats need not be attached ! You can't use `macro parameter character #' in horizontal mode. l.1969 ls(ee) # names of objects in ee ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1971 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1972 \end{Examples} ! Undefined control sequence. l.1973 \HeaderA {as.function}{Convert Object to Function}{as.function} ! Undefined control sequence. l.1974 \methaliasA {as.function.default}{as.function}{as.function.default} ! Undefined control sequence. l.1975 \keyword {programming}{as.function} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1977 \begin{Description} \relax ! Undefined control sequence. l.1978 \code {as.function} is a generic function which is used to convert Underfull \hbox (badness 1052) in paragraph at lines 1946--1980 \OT1/cmr/m/n/10 The cor-re-spond-ing en-vi-ron-ment ob-ject. This is a prim-i- tiveprim-i-tive Underfull \hbox (badness 1112) in paragraph at lines 1946--1980 \OT1/cmr/m/n/10 ma-nip-u-la-tion, search-search; list2envlist2env. as.enviro nment(1) Underfull \hbox (badness 1009) in paragraph at lines 1946--1980 \OT1/cmr/m/n/10 try( <<- stats need not be at-tached as.environment("package:s tats")) ee Underfull \hbox (badness 2318) in paragraph at lines 1946--1980 \OT1/cmr/m/n/10 of ob-jects in ee utils::ls.str(ee) as.functionConvert Ob-jec t to Func- Underfull \hbox (badness 1406) in paragraph at lines 1946--1980 \OT1/cmr/m/n/10 tionas.function as.function.defaultas.functionas.function.defau lt pro-gram-min- ! Undefined control sequence. l.1981 \code {as.function.default} works on a list \code{x}, which should con... ! Undefined control sequence. l.1981 ....function.default} works on a list \code {x}, which should contain the ! Undefined control sequence. l.1983 object of mode \code {"\LinkA{call}{call}"} which will become the func... ! Undefined control sequence. l.1983 object of mode \code{"\LinkA {call}{call}"} which will become the func... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1986 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1988 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1995 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1997 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1998 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1999 \item[\code{x}] object to convert, a list for the default method. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2000 \item[\code{...}] additional arguments, depending on object ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2002 \item[\code{envir}] environment in which the function should be defined ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2003 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2004 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2006 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2008 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2010 \begin{Note} \relax ! Undefined control sequence. l.2011 For ancient historical reasons, \code {envir = NULL} uses the global ! Undefined control sequence. l.2013 Please use \code {envir = \LinkA{globalenv}{globalenv}()} instead if t... ! Undefined control sequence. l.2013 Please use \code{envir = \LinkA {globalenv}{globalenv}()} instead if t... ! Undefined control sequence. l.2014 as the special handling of \code {NULL} may change in a future release. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2015 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2017 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2019 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2021 \begin{SeeAlso} \relax ! Undefined control sequence. l.2022 \code {\LinkA{function}{function}}; ! Undefined control sequence. l.2022 \code{\LinkA {function}{function}}; ! Undefined control sequence. l.2023 \code {\LinkA{alist}{alist}} which is handy for the construction of ! Undefined control sequence. l.2023 \code{\LinkA {alist}{alist}} which is handy for the construction of ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2025 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2027 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2028 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2031 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2032 \end{Examples} ! Undefined control sequence. l.2033 \HeaderA {as.POSIX*}{Date-time Conversion Functions}{as.POSIX*} ! Undefined control sequence. l.2034 \aliasA {as.double.POSIXlt}{as.POSIX*}{as.double.POSIXlt} ! Undefined control sequence. l.2035 \aliasA {as.POSIXct}{as.POSIX*}{as.POSIXct} ! Undefined control sequence. l.2036 \methaliasA {as.POSIXct.Date}{as.POSIX*}{as.POSIXct.Date} ! Undefined control sequence. l.2037 \methaliasA {as.POSIXct.date}{as.POSIX*}{as.POSIXct.date} ! Undefined control sequence. l.2038 \methaliasA {as.POSIXct.dates}{as.POSIX*}{as.POSIXct.dates} ! Undefined control sequence. l.2039 \methaliasA {as.POSIXct.default}{as.POSIX*}{as.POSIXct.default} ! Undefined control sequence. l.2040 \methaliasA {as.POSIXct.numeric}{as.POSIX*}{as.POSIXct.numeric} ! Undefined control sequence. l.2041 \methaliasA ) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1 {as.POSIXct.POSIXlt}{as.POSIX*}{as.POSIXct.POSIXlt} ! Undefined control sequence. l.2042 \aliasA {as.POSIXlt}{as.POSIX*}{as.POSIXlt} ! Undefined control sequence. l.2043 \methaliasA {as.POSIXlt.character}{as.POSIX*}{as.POSIXlt.character} ! Undefined control sequence. l.2044 \methaliasA {as.POSIXlt.Date}{as.POSIX*}{as.POSIXlt.Date} ! Undefined control sequence. l.2045 \methaliasA {as.POSIXlt.date}{as.POSIX*}{as.POSIXlt.date} ! Undefined control sequence. l.2046 \methaliasA {as.POSIXlt.dates}{as.POSIX*}{as.POSIXlt.dates} ! Undefined control sequence. l.2047 \methaliasA {as.POSIXlt.default}{as.POSIX*}{as.POSIXlt.default} ! Undefined control sequence. l.2048 \methaliasA {as.POSIXlt.factor}{as.POSIX*}{as.POSIXlt.factor} ! Undefined control sequence. l.2049 \methaliasA {as.POSIXlt.numeric}{as.POSIX*}{as.POSIXlt.numeric} ! Undefined control sequence. l.2050 \methaliasA {as.POSIXlt.POSIXct}{as.POSIX*}{as.POSIXlt.POSIXct} ! Undefined control sequence. l.2051 \keyword {utilities}{as.POSIX*} ! Undefined control sequence. l.2052 \keyword {chron}{as.POSIX*} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2054 \begin{Description} \relax ! Undefined control sequence. l.2055 ...s to manipulate objects of classes \code {"POSIXlt"} and ! Undefined control sequence. l.2056 \code {"POSIXct"} representing calendar dates and times. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2057 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2059 \begin{Usage} Overfull \hbox (5.88963pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXctas.POSIX*as.POSIXct as.POSIXct.Dateas.POSIX*as.POSIXc t.Date Overfull \hbox (52.9453pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXct.dateas.POSIX*as.POSIXct.date as.POSIXct.datesas.POSI X*as.POSIXct.dates Underfull \hbox (badness 10000) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXct.defaultas.POSIX*as.POSIXct.default Underfull \hbox (badness 10000) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXct.numericas.POSIX*as.POSIXct.numeric Underfull \hbox (badness 10000) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXct.POSIXltas.POSIX*as.POSIXct.POSIXlt Overfull \hbox (37.94527pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXltas.POSIX*as.POSIXlt as.POSIXlt.characteras.POSIX*as.P OSIXlt.character Overfull \hbox (42.55644pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXlt.Dateas.POSIX*as.POSIXlt.Date as.POSIXlt.dateas.POSIX *as.POSIXlt.date Overfull \hbox (69.05653pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXlt.datesas.POSIX*as.POSIXlt.dates as.POSIXlt.defaultas. POSIX*as.POSIXlt.default Overfull \hbox (82.94542pt too wide) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXlt.factoras.POSIX*as.POSIXlt.factor as.POSIXlt.numerica s.POSIX*as.POSIXlt.numeric Underfull \hbox (badness 10000) in paragraph at lines 2002--2060 \OT1/cmr/m/n/10 as.POSIXlt.POSIXctas.POSIX*as.POSIXlt.POSIXct util-i-tiesas.POS IX* [22{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2073 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2075 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2076 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2077 \item[\code{x}] An object to be converted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2078 \item[\code{tz}] A time zone specification to be used for the convers... ! Undefined control sequence. l.2079 ... required}. System-specific (see \LinkA {time zones}{time zones}), ! Undefined control sequence. l.2080 but \code {""} is the current time zone, and \code{"GMT"} is UTC ! Undefined control sequence. l.2080 ...{""} is the current time zone, and \code {"GMT"} is UTC ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2083 \item[\code{...}] further arguments to be passed to or from other met... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2084 \item[\code{format}] character string giving a date-time format as used ! Undefined control sequence. l.2085 by \code {\LinkA{strptime}{strptime}}. ! Undefined control sequence. l.2085 by \code{\LinkA {strptime}{strptime}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2086 \item[\code{origin}] a date-time object, or something which can be co... ! Undefined control sequence. l.2087 \code {as.POSIXct(tz = "GMT")} to such an object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2088 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2089 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2091 \begin{Details} \relax ! Undefined control sequence. l.2092 The \code {as.POSIX*} functions convert an object to one of the two ! Undefined control sequence. l.2095 ... of the other class and of classes \code {"Date"}, ! Undefined control sequence. l.2096 \code {"date"} (from package \pkg{\LinkA{date}{date}}), ! Undefined control sequence. l.2096 \code{"date"} (from package \pkg {\LinkA{date}{date}}), ! Undefined control sequence. l.2096 \code{"date"} (from package \pkg{\LinkA {date}{date}}), ! Undefined control sequence. l.2097 \code {"chron"} and \code{"dates"} (from package ! Undefined control sequence. l.2097 \code{"chron"} and \code {"dates"} (from package ! Undefined control sequence. l.2098 \pkg {\LinkA{chron}{chron}}) to these classes. Dates without times are ! Undefined control sequence. l.2098 \pkg{\LinkA {chron}{chron}}) to these classes. Dates without times are ! Undefined control sequence. l.2102 \code {"2001-02-03"} and \code{"2001/02/03"} optionally followed by ! Undefined control sequence. l.2102 \code{"2001-02-03"} and \code {"2001/02/03"} optionally followed by ! Undefined control sequence. l.2103 white space and a time in the format \code {"14:52"} or ! Undefined control sequence. l.2104 \code {"14:52:03"}. (Formats such as \code{"01/02/03"} are ambiguous ! Undefined control sequence. l.2104 \code{"14:52:03"}. (Formats such as \code {"01/02/03"} are ambiguous ! Undefined control sequence. l.2106 \code {\LinkA{strptime}{strptime}}.) Fractional seconds are allowed. ! Undefined control sequence. l.2106 \code{\LinkA {strptime}{strptime}}.) Fractional seconds are allowed. ! Undefined control sequence. l.2107 Alternatively, \code {format} can be specified for character vectors or ! Undefined control sequence. l.2109 all non-\code {NA} inputs an error is thrown. ! Undefined control sequence. l.2111 If \code {format} is specified, remember that some of the format ! Undefined control sequence. l.2113 \code {LC\_TIME} category appropriately \emph{via} ! Undefined control sequence. l.2114 \code {\LinkA{Sys.setlocale}{Sys.setlocale}}. This most often affects... ! Undefined control sequence. l.2114 \code{\LinkA {Sys.setlocale}{Sys.setlocale}}. This most often affects... ! Undefined control sequence. l.2115 \code {\%b}, \code{\%B} (month names) and \code{\%p} (AM/PM). ! Undefined control sequence. l.2115 \code{\%b}, \code {\%B} (month names) and \code{\%p} (AM/PM). ! Undefined control sequence. l.2115 ...\%b}, \code{\%B} (month names) and \code {\%p} (AM/PM). [23] ! Undefined control sequence. l.2117 Logical \code {NA}s can be converted to either of the classes, but no ! Undefined control sequence. l.2123 ... input is first converted to class \code {"POSIXlt"} by ! Undefined control sequence. l.2124 \code {\LinkA{strptime}{strptime}}: numeric input is first converted to ! Undefined control sequence. l.2124 \code{\LinkA {strptime}{strptime}}: numeric input is first converted to ! Undefined control sequence. l.2125 \code {"POSIXct"}. Any conversion that needs to go between the two ! Undefined control sequence. l.2127 \code {"POSIXlt"} to \code{"POSIXct"} will validate times in the ! Undefined control sequence. l.2127 \code{"POSIXlt"} to \code {"POSIXct"} will validate times in the ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2130 \begin{alltt} as.POSIXct(strptime("2011-03-27 01:30:00", "%Y-%m-%d %H:... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2132 \end{alltt} ! Undefined control sequence. l.2137 be \code {NA}, but the second could be interpreted as either BST or ! Undefined control sequence. l.2139 \code {\LinkA{strftime}{strftime}}) that OS facilities may not format ... ! Undefined control sequence. l.2139 \code{\LinkA {strftime}{strftime}}) that OS facilities may not format ... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2141 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2143 \begin{Value} ! Undefined control sequence. l.2144 \code {as.POSIXct} and \code{as.POSIXlt} return an object of the ! Undefined control sequence. l.2144 \code{as.POSIXct} and \code {as.POSIXlt} return an object of the ! Undefined control sequence. l.2145 appropriate class. If \code {tz} was specified, \code{as.POSIXlt} ! Undefined control sequence. l.2145 ...lass. If \code{tz} was specified, \code {as.POSIXlt} ! Undefined control sequence. l.2146 will give an appropriate \code {"tzone"} attribute. Date-times known ! Undefined control sequence. l.2147 to be invalid will be returned as \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2148 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2150 \begin{Note} \relax ! Undefined control sequence. l.2153 time for the \code {"POSIXct"} class, `1970-01-01 00:00.00 UTC', ! Undefined control sequence. l.2162 the week) just convert it to class \code {"POSIXlt"} and extract the ! Undefined control sequence. l.2165 \code {\LinkA{format}{format}} method. ! Undefined control sequence. l.2165 \code{\LinkA {format}{format}} method. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2174 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2176 \begin{SeeAlso} \relax ! Undefined control sequence. l.2177 \LinkA {DateTimeClasses}{DateTimeClasses} for details of the classes; ! Undefined control sequence. l.2178 \code {\LinkA{strptime}{strptime}} for conversion to and from character ! Undefined control sequence. l.2178 \code{\LinkA {strptime}{strptime}} for conversion to and from character ! Undefined control sequence. l.2181 \code {\LinkA{Sys.timezone}{Sys.timezone}} for details of the (system-... ! Undefined control sequence. l.2181 \code{\LinkA {Sys.timezone}{Sys.timezone}} for details of the (system-... ! Undefined control sequence. l.2184 \LinkA {locales}{locales} for locale-specific aspects. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2185 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2187 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2188 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2190 (z <- Sys.time()) # the current datetime, as class "POSIXct" ! You can't use `macro parameter character #' in horizontal mode. l.2191 unclass(z) # a large integer ! You can't use `macro parameter character #' in horizontal mode. l.2192 floor(unclass(z)/86400) # the number of days since 1970-01-01 (... ! You can't use `macro parameter character #' in horizontal mode. l.2193 (now <- as.POSIXlt(Sys.time())) # the current datetime, as class "POS... ! You can't use `macro parameter character #' in horizontal mode. l.2194 unlist(unclass(now)) # a list shown as a named vector ! You can't use `macro parameter character #' in math mode. l.2195 now$year + 1900 # see ?DateTimeClasses ! You can't use `macro parameter character #' in math mode. l.2196 months(now); weekdays(now) # see ?months ! Missing $ inserted. $ l.2197 ! You can't use `macro parameter character #' in vertical mode. l.2198 # # suppose we have a time in seconds since 1960-01-01 00:00:00 GMT ! You can't use `macro parameter character #' in vertical mode. l.2198 ## suppose we have a time in seconds since 1960-01-01 00:00:00 GMT ! You can't use `macro parameter character #' in horizontal mode. l.2199 # # (the origin used by SAS) ! You can't use `macro parameter character #' in horizontal mode. l.2199 ## (the origin used by SAS) ! You can't use `macro parameter character #' in horizontal mode. l.2201 # ways to convert this ! You can't use `macro parameter character #' in horizontal mode. l.2202 ... origin = "1960-01-01") # local ! You can't use `macro parameter character #' in horizontal mode. l.2203 ... origin = "1960-01-01", tz = "GMT") # in UTC [24] ! You can't use `macro parameter character #' in vertical mode. l.2205 # # SPSS dates (R-help 2006-02-16) ! You can't use `macro parameter character #' in vertical mode. l.2205 ## SPSS dates (R-help 2006-02-16) Underfull \hbox (badness 4328) in paragraph at lines 2205--2208 []\OT1/cmr/m/n/10 SPSS dates (R-help 2006-02-16) z <- c(10485849600, 1047764160 0, ! You can't use `macro parameter character #' in vertical mode. l.2209 # # Stata date-times: milliseconds since 1960-01-01 00:00:00 GMT ! You can't use `macro parameter character #' in vertical mode. l.2209 ## Stata date-times: milliseconds since 1960-01-01 00:00:00 GMT ! You can't use `macro parameter character #' in horizontal mode. l.2210 # # format %tc excludes leap-seconds, assumed here ! You can't use `macro parameter character #' in horizontal mode. l.2210 ## format %tc excludes leap-seconds, assumed here ! You can't use `macro parameter character #' in horizontal mode. l.2211 # # For format %tC including leap seconds, see foreign::read.dta() ! You can't use `macro parameter character #' in horizontal mode. l.2211 ## For format %tC including leap seconds, see foreign::read.dta() ! You can't use `macro parameter character #' in horizontal mode. l.2214 # avoid rounding down: milliseconds are not exactly representable ! You can't use `macro parameter character #' in vertical mode. l.2218 # # Matlab 'serial day number' (days and fractional days) ! You can't use `macro parameter character #' in vertical mode. l.2218 ## Matlab 'serial day number' (days and fractional days) ! You can't use `macro parameter character #' in horizontal mode. l.2219 z <- 7.343736909722223e5 # 2010-08-23 16:35:00 Underfull \hbox (badness 10000) in paragraph at lines 2218--2221 []\OT1/cmr/m/n/10 Matlab 'se-rial day num-ber' (days and frac-tional days) z <- ! You can't use `macro parameter character #' in horizontal mode. l.2222 as.POSIXlt(Sys.time(), "GMT") # the current time in UTC ! You can't use `macro parameter character #' in vertical mode. l.2224 # # These may not be correct names on your system ! You can't use `macro parameter character #' in vertical mode. l.2224 ## These may not be correct names on your system ! Missing $ inserted. $ l.2225 as.POSIXlt(Sys.time(), "America/New_ York") # in New York ! You can't use `macro parameter character #' in math mode. l.2225 ...SIXlt(Sys.time(), "America/New_York") # in New York ! You can't use `macro parameter character #' in math mode. l.2226 ...SIXlt(Sys.time(), "EST5EDT") # alternative. ! You can't use `macro parameter character #' in math mode. l.2227 as.POSIXlt(Sys.time(), "EST" ) # somewhere in Eastern Canada ! You can't use `macro parameter character #' in math mode. l.2228 as.POSIXlt(Sys.time(), "HST") # in Hawaii ! Missing $ inserted. $ l.2230 Overfull \hbox (717.19884pt too wide) in paragraph at lines 2224--2230 \OT1/cmr/m/n/10 "America/New$[]\OML/cmm/m/it/10 ork\OT1/cmr/m/n/10 ")\OML/cmm/m /it/10 inNewYorkas:POSIXlt\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time\OT1/cmr/m/ n/10 ()\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 EST\OT1/cmr/m/n/10 5\OML/cmm/m/it/10 EDT\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 alternative:as:POSIXlt\ OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 ; \ OT1/cmr/m/n/10 "\OML/cmm/m/it/10 EST\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 somewher einEasternCanadaas:POSIXlt\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time\OT1/cmr/m/ n/10 ()\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 HST\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 inHawaiias:POSIXlt\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time \OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 Australi a=Darwin\OT1/cmr/m/n/10 ")$ ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2231 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2232 \end{Examples} ! Undefined control sequence. l.2233 \HeaderA {AsIs}{Inhibit Interpretation/Conversion of Objects}{AsIs} ! Undefined control sequence. l.2234 \aliasA {I}{AsIs}{I} ! Undefined control sequence. l.2235 \aliasA {print.AsIs}{AsIs}{print.AsIs} ! Undefined control sequence. l.2236 \aliasA {[.AsIs}{AsIs}{[.AsIs} ! Undefined control sequence. l.2237 \keyword {models}{AsIs} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2239 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2242 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2244 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 2233--2245 \OT1/cmr/m/n/10 AsIsInhibit In-ter-pre-ta-tion/Conversion of Ob-ject-sAsIs IA-s IsI Underfull \hbox (badness 2035) in paragraph at lines 2233--2245 \OT1/cmr/m/n/10 print.AsIsAsIsprint.AsIs [.AsIsAsIs[.AsIs mod-el-sAsIs Change t he class of ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2248 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2250 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2251 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2252 \item[\code{x}] an object ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2253 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2254 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2256 \begin{Details} \relax ! Undefined control sequence. l.2257 Function \code {I} has two main uses. ! Undefined control sequence. l.2260 \item In function \code {\LinkA{data.frame}{data.frame}}. Protecting ... ! Undefined control sequence. l.2260 \item In function \code{\LinkA {data.frame}{data.frame}}. Protecting ... ! Undefined control sequence. l.2261 enclosing it in \code {I()} in a call to \code{data.frame} inhibits the ! Undefined control sequence. l.2261 ...sing it in \code{I()} in a call to \code {data.frame} inhibits the ! Undefined control sequence. l.2264 \code {I} can also be used to protect objects which are to be ! Undefined control sequence. l.2266 \code {\LinkA{as.data.frame}{as.data.frame}}. ! Undefined control sequence. l.2266 \code{\LinkA {as.data.frame}{as.data.frame}}. ! Undefined control sequence. l.2268 ...ieves this by prepending the class \code {"AsIs"} to the object's ! Undefined control sequence. l.2269 classes. Class \code {"AsIs"} has a few of its own methods, including ! Undefined control sequence. l.2270 for \code {[}, \code{as.data.frame}, \code{print} and \code{format}. ! Undefined control sequence. l.2270 for \code{[}, \code {as.data.frame}, \code{print} and \code{format}. ! Undefined control sequence. l.2270 for \code{[}, \code{as.data.frame}, \code {print} and \code{format}. ! Undefined control sequence. l.2270 ...e{as.data.frame}, \code{print} and \code {format}. ! Undefined control sequence. l.2272 \item In function \code {\LinkA{formula}{formula}}. There it is used to ! Undefined control sequence. l.2272 \item In function \code{\LinkA {formula}{formula}}. There it is used to ! Undefined control sequence. l.2273 ...terpretation of operators such as \code {"+"}, ! Undefined control sequence. l.2274 \code {"-"}, \code{"*"} and \code{"\textasciicircum{}"} as formula ope... ! Undefined control sequence. l.2274 \code{"-"}, \code {"*"} and \code{"\textasciicircum{}"} as formula ope... ! Undefined control sequence. l.2274 \code{"-"}, \code{"*"} and \code {"\textasciicircum{}"} as formula ope... ! Undefined control sequence. l.2276 by \code {terms.formula}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2280 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2282 \begin{Value} ! Undefined control sequence. l.2283 A copy of the object with class \code {"AsIs"} prepended to the class(... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2284 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2286 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2291 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2293 \begin{SeeAlso} \relax ! Undefined control sequence. l.2294 \code {\LinkA{data.frame}{data.frame}}, \code{\LinkA{formula}{formula}} ! Undefined control sequence. l.2294 \code{\LinkA {data.frame}{data.frame}}, \code{\LinkA{formula}{formula}} ! Undefined control sequence. l.2294 ...e{\LinkA{data.frame}{data.frame}}, \code {\LinkA{formula}{formula}} ! Undefined control sequence. l.2294 ...A{data.frame}{data.frame}}, \code{\LinkA {formula}{formula}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2295 \end{SeeAlso} ! Undefined control sequence. l.2296 \HeaderA {assign}{Assign a Value to a Name}{assign} ! Undefined control sequence. l.2297 \keyword {data}{assign} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2299 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2301 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2303 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2308 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2310 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2311 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2312 \item[\code{x}] a variable name, given as a character string. No coe... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2315 \item[\code{value}] a value to be assigned to \code{x}. ! Undefined control sequence. l.2315 ...{value}] a value to be assigned to \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2316 \item[\code{pos}] where to do the assignment. By default, assigns in... [25] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2318 \item[\code{envir}] the \code{\LinkA{environment}{environment}} to us... ! Undefined control sequence. l.2318 \item[\code{envir}] the \code {\LinkA{environment}{environment}} to us... ! Undefined control sequence. l.2318 \item[\code{envir}] the \code{\LinkA {environment}{environment}} to us... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2319 \item[\code{inherits}] should the enclosing frames of the environment be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2321 \item[\code{immediate}] an ignored compatibility feature. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2322 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2323 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2325 \begin{Details} \relax ! Undefined control sequence. l.2326 ... restrictions on the name given as \code {x}: it can be a ! Undefined control sequence. l.2327 non-syntactic name (see \code {\LinkA{make.names}{make.names}}). ! Undefined control sequence. l.2327 non-syntactic name (see \code{\LinkA {make.names}{make.names}}). ! Undefined control sequence. l.2329 The \code {pos} argument can specify the environment in which to assign ! Undefined control sequence. l.2330 the object in any of several ways: as \code {-1} (the default), ! Undefined control sequence. l.2331 ...itive integer (the position in the \code {\LinkA{search}{search}} l... ! Undefined control sequence. l.2331 ...nteger (the position in the \code{\LinkA {search}{search}} list); as ! Undefined control sequence. l.2333 \code {\LinkA{environment}{environment}} (including using \code{\LinkA... ! Undefined control sequence. l.2333 \code{\LinkA {environment}{environment}} (including using \code{\LinkA... ! Undefined control sequence. l.2333 ...nt}{environment}} (including using \code {\LinkA{sys.frame}{sys.fra... ! Undefined control sequence. l.2333 ...ironment}} (including using \code{\LinkA {sys.frame}{sys.frame}} to ! Undefined control sequence. l.2335 The \code {envir} argument is an alternative way to specify an ! Undefined control sequence. l.2338 \code {assign} does not dispatch assignment methods, so it cannot be ! Undefined control sequence. l.2342 ...y and not the original object: see \code {\LinkA{attach}{attach}} ! Undefined control sequence. l.2342 ...ot the original object: see \code{\LinkA {attach}{attach}} ! Undefined control sequence. l.2343 and \code {\LinkA{with}{with}}. ! Undefined control sequence. l.2343 and \code{\LinkA {with}{with}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2344 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2346 \begin{Value} ! Undefined control sequence. l.2348 \code {value} to the variable \code{x}. If no \code{envir} is ! Undefined control sequence. l.2348 \code{value} to the variable \code {x}. If no \code{envir} is ! Undefined control sequence. l.2348 ...} to the variable \code{x}. If no \code {envir} is ! Undefined control sequence. l.2352 If \code {inherits} is \code{TRUE}, enclosing environments of the supp... ! Undefined control sequence. l.2352 If \code{inherits} is \code {TRUE}, enclosing environments of the supp... ! Undefined control sequence. l.2353 ...nt are searched until the variable \code {x} is encountered. ! Undefined control sequence. l.2356 \code {\LinkA{lockBinding}{lockBinding}}: if it is, an error is signal... ! Undefined control sequence. l.2356 \code{\LinkA {lockBinding}{lockBinding}}: if it is, an error is signal... ! Undefined control sequence. l.2360 If \code {inherits} is \code{FALSE}, assignment takes place in the ! Undefined control sequence. l.2360 If \code{inherits} is \code {FALSE}, assignment takes place in the ! Undefined control sequence. l.2361 initial frame of \code {envir}, unless an existing binding is locked or ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2364 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2366 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2370 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2372 \begin{SeeAlso} \relax ! Undefined control sequence. l.2373 \code {\LinkA{<-}{<.Rdash.}}, ! Undefined control sequence. l.2373 \code{\LinkA {<-}{<.Rdash.}}, ! Undefined control sequence. l.2374 \code {\LinkA{get}{get}}, the inverse of \code{assign()}, ! Undefined control sequence. l.2374 \code{\LinkA {get}{get}}, the inverse of \code{assign()}, ! Undefined control sequence. l.2374 ...{\LinkA{get}{get}}, the inverse of \code {assign()}, ! Undefined control sequence. l.2375 \code {\LinkA{exists}{exists}}, ! Undefined control sequence. l.2375 \code{\LinkA {exists}{exists}}, ! Undefined control sequence. l.2376 \code {\LinkA{environment}{environment}}. ! Undefined control sequence. l.2376 \code{\LinkA {environment}{environment}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2377 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2379 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2380 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2381 for(i in 1:6) { # -- Create objects 'r.1', 'r.2', ... 'r.6' -- ! Missing $ inserted. $ l.2385 ls(pattern = "^ r..$") ! You can't use `macro parameter character #' in vertical mode. l.2387 # #-- Global assignment within a function: ! You can't use `macro parameter character #' in vertical mode. l.2387 ## -- Global assignment within a function: ! Missing $ inserted. $ l.2389 ...f <- function(x) assign("Global.res", x^ 2, envir = .GlobalEnv) ! Extra }, or forgotten $. l.2391 } ! You can't use `macro parameter character #' in math mode. l.2393 Global.res # 16 ! Missing $ inserted. $ l.2394 Underfull \hbox (badness 1509) in paragraph at lines 2387--2394 []\OT1/cmr/m/n/10 -- Global as-sign-ment within a func-tion: myf <- func-tion(x ) in-nerf Underfull \hbox (badness 2744) in paragraph at lines 2387--2394 \OT1/cmr/m/n/10 <- func-tion(x) as-sign("Global.res", x$[]\OML/cmm/m/it/10 ; en vir \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 :GlobalEnv\OT1/cmr/m/n/10 )\OML/cmm/m/it /10 innerf\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x \OT1/cmr/m/n/10 + ! You can't use `macro parameter character #' in horizontal mode. l.2397 a[1] == 2 # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.2398 get("a[1]") == 2 # TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2400 \end{ExampleCode} ! Missing } inserted. } l.2400 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2401 \end{Examples} ! Undefined control sequence. l.2402 \HeaderA {assignOps}{Assignment Operators}{assignOps} ! Undefined control sequence. l.2403 \aliasA {->}{assignOps}{.Rdash.>} ! Undefined control sequence. l.2404 \aliasA {->>}{assignOps}{.Rdash.>>} ! Undefined control sequence. l.2405 \aliasA {<\Rdash{}}{assignOps}{<.Rdash.} ! Undefined control sequence. l.2405 \aliasA{<\Rdash {}}{assignOps}{<.Rdash.} ! Undefined control sequence. l.2406 \aliasA {<<\Rdash{}}{assignOps}{<<.Rdash.} ! Undefined control sequence. l.2406 \aliasA{<<\Rdash {}}{assignOps}{<<.Rdash.} ! Undefined control sequence. l.2407 \aliasA {=}{assignOps}{=} ! Undefined control sequence. l.2408 \keyword {data}{assignOps} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2410 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2412 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2414 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 2402--2415 \OT1/cmr/m/n/10 assignOpsAssignment Op-er-a-tor-sas-signOps ->assignOps.Rdash.> - ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2423 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2425 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2426 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2427 \item[\code{x}] a variable name (possibly quoted). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2428 \item[\code{value}] a value to be assigned to \code{x}. ! Undefined control sequence. l.2428 ...{value}] a value to be assigned to \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2429 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2430 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2432 \begin{Details} \relax ! Undefined control sequence. l.2436 The operators \code {<-} and \code{=} assign into the environment in ! Undefined control sequence. l.2436 The operators \code{<-} and \code {=} assign into the environment in ! Undefined control sequence. l.2437 ...they are evaluated. The operator \code {<-} can be used ! Undefined control sequence. l.2438 anywhere, whereas the operator \code {=} is only allowed at the top [26] ! Undefined control sequence. l.2442 The operators \code {<{}<-} and \code{->{}>} are normally only used in ! Undefined control sequence. l.2442 The operators \code{<{}<-} and \code {->{}>} are normally only used in ! Undefined control sequence. l.2449 \R {}. See `The R Language Definition' manual for further ! Undefined control sequence. l.2452 ...e assignment operator expressions, \code {x} can be a name ! Undefined control sequence. l.2454 \code {z[[1]]}). A syntactic name does not need to be quoted, ! Undefined control sequence. l.2455 though it can be (preferably by \LinkA {backtick}{backtick}s). ! Undefined control sequence. l.2457 The leftwards forms of assignment \code {<- = <{}<-} group right to left, ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2459 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2461 \begin{Value} ! Undefined control sequence. l.2462 \code {value}. Thus one can use \code{a <- b <- c <- 6}. ! Undefined control sequence. l.2462 \code{value}. Thus one can use \code {a <- b <- c <- 6}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2463 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2465 \begin{References} \relax ! Undefined control sequence. l.2472 Springer (for \code {=}). ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2473 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2475 \begin{SeeAlso} \relax ! Undefined control sequence. l.2476 \code {\LinkA{assign}{assign}} (and its inverse \code{\LinkA{get}{get}}), ! Undefined control sequence. l.2476 \code{\LinkA {assign}{assign}} (and its inverse \code{\LinkA{get}{get}}), ! Undefined control sequence. l.2476 ...{assign}{assign}} (and its inverse \code {\LinkA{get}{get}}), ! Undefined control sequence. l.2476 ...}{assign}} (and its inverse \code{\LinkA {get}{get}}), ! Undefined control sequence. l.2477 for ``subassignment'' such as \code {x[i] <- v}, ! Undefined control sequence. l.2478 see \code {\LinkA{[<-}{[<.Rdash.}}; ! Undefined control sequence. l.2478 see \code{\LinkA {[<-}{[<.Rdash.}}; ! Undefined control sequence. l.2479 further, \code {\LinkA{environment}{environment}}. ! Undefined control sequence. l.2479 further, \code{\LinkA {environment}{environment}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2480 \end{SeeAlso} ! Undefined control sequence. l.2481 \HeaderA {attach}{Attach Set of R Objects to Search Path}{attach} ! Undefined control sequence. l.2482 \aliasA {.conflicts.OK}{attach}{.conflicts.OK} ! Undefined control sequence. l.2483 \keyword {data}{attach} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2485 \begin{Description} \relax ! Undefined control sequence. l.2486 The database is attached to the \R {} search path. This means that the ! Undefined control sequence. l.2487 database is searched by \R {} when evaluating a variable, so objects in ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2489 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2491 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2496 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2498 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2499 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2500 \item[\code{what}] `database'. This can be a ! Undefined control sequence. l.2501 \code {data.frame} or a \code{list} or a \R{} data file created with ! Undefined control sequence. l.2501 \code{data.frame} or a \code {list} or a \R{} data file created with ! Undefined control sequence. l.2501 \code{data.frame} or a \code{list} or a \R {} data file created with ! Undefined control sequence. l.2502 \code {\LinkA{save}{save}} or \code{NULL} or an environment. See also ! Undefined control sequence. l.2502 \code{\LinkA {save}{save}} or \code{NULL} or an environment. See also ! Undefined control sequence. l.2502 \code{\LinkA{save}{save}} or \code {NULL} or an environment. See also ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2504 \item[\code{pos}] integer specifying position in \code{\LinkA{search}... ! Undefined control sequence. l.2504 ...s}] integer specifying position in \code {\LinkA{search}{search}()}... ! Undefined control sequence. l.2504 ...eger specifying position in \code{\LinkA {search}{search}()} where ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2506 \item[\code{name}] name to use for the attached database. Names start... ! Undefined control sequence. l.2507 \code {package:} are reserved for \code{\LinkA{library}{library}}. ! Undefined control sequence. l.2507 \code{package:} are reserved for \code {\LinkA{library}{library}}. ! Undefined control sequence. l.2507 ...{package:} are reserved for \code{\LinkA {library}{library}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2508 \item[\code{warn.conflicts}] logical. If \code{TRUE}, warnings are ! Undefined control sequence. l.2508 ...code{warn.conflicts}] logical. If \code {TRUE}, warnings are ! Undefined control sequence. l.2509 printed about \code {\LinkA{conflicts}{conflicts}} from attaching the ... ! Undefined control sequence. l.2509 printed about \code{\LinkA {conflicts}{conflicts}} from attaching the ... ! Undefined control sequence. l.2510 ...s that database contains an object \code {.conflicts.OK}. A ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2514 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2515 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2517 \begin{Details} \relax ! Undefined control sequence. l.2518 ...valuating a variable or function name \R {} searches for ! Undefined control sequence. l.2519 that name in the databases listed by \code {\LinkA{search}{search}}. ... ! Undefined control sequence. l.2519 ... in the databases listed by \code{\LinkA {search}{search}}. The first ! Undefined control sequence. l.2525 \code {height} rather than \code{women\$height}). ! Undefined control sequence. l.2525 \code{height} rather than \code {women\$height}). ! Undefined control sequence. l.2530 ... later in the search path with the \code {pos} option, ! Undefined control sequence. l.2531 but you cannot attach at \code {pos = 1}. ! Undefined control sequence. l.2537 \code {\LinkA{<{}<-}{<<.Rdash.}} or \code{\LinkA{assign}{assign}} to a... ! Undefined control sequence. l.2537 \code{\LinkA {<{}<-}{<<.Rdash.}} or \code{\LinkA{assign}{assign}} to a... ! Undefined control sequence. l.2537 \code{\LinkA{<{}<-}{<<.Rdash.}} or \code {\LinkA{assign}{assign}} to a... ! Undefined control sequence. l.2537 ...LinkA{<{}<-}{<<.Rdash.}} or \code{\LinkA {assign}{assign}} to assig... ! Undefined control sequence. l.2540 ...ee the examples.) For this reason \code {attach} can lead [27] ! Undefined control sequence. l.2543 One useful `trick' is to use \code {what = NULL} (or equivalently a ! Undefined control sequence. l.2545 which objects can be assigned by \code {\LinkA{assign}{assign}} or ! Undefined control sequence. l.2545 ... objects can be assigned by \code{\LinkA {assign}{assign}} or ! Undefined control sequence. l.2546 \code {\LinkA{load}{load}} or \code{\LinkA{sys.source}{sys.source}}. ! Undefined control sequence. l.2546 \code{\LinkA {load}{load}} or \code{\LinkA{sys.source}{sys.source}}. ! Undefined control sequence. l.2546 \code{\LinkA{load}{load}} or \code {\LinkA{sys.source}{sys.source}}. ! Undefined control sequence. l.2546 \code{\LinkA{load}{load}} or \code{\LinkA {sys.source}{sys.source}}. ! Undefined control sequence. l.2548 Names starting \code {"package:"} are reserved for ! Undefined control sequence. l.2549 \code {\LinkA{library}{library}} and should not be used by end users. ... ! Undefined control sequence. l.2549 \code{\LinkA {library}{library}} and should not be used by end users. ... ! Undefined control sequence. l.2550 files are by default given the name \code {file:\var{what}}. The ! Undefined control sequence. l.2550 ...y default given the name \code{file:\var {what}}. The ! Undefined control sequence. l.2551 \code {name} argument given for the attached environment will be used ! Undefined control sequence. l.2552 by \code {\LinkA{search}{search}} and can be used as the argument to ! Undefined control sequence. l.2552 by \code{\LinkA {search}{search}} and can be used as the argument to ! Undefined control sequence. l.2553 \code {\LinkA{as.environment}{as.environment}}. ! Undefined control sequence. l.2553 \code{\LinkA {as.environment}{as.environment}}. ! Undefined control sequence. l.2556 \code {"UserDefinedDatabase"}, supported by the Omegahat package ! Undefined control sequence. l.2557 \pkg {RObjectTables}. See \url{http://www.omegahat.net/RObjectTables/}. ! Undefined control sequence. l.2557 \pkg{RObjectTables}. See \url {http://www.omegahat.net/RObjectTables/}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2558 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2560 \begin{Value} ! Undefined control sequence. l.2561 The \code {\LinkA{environment}{environment}} is returned invisibly with a ! Undefined control sequence. l.2561 The \code{\LinkA {environment}{environment}} is returned invisibly with a ! Undefined control sequence. l.2562 \code {"name"} attribute. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2563 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2565 \begin{Section} {Good practice} ! Undefined control sequence. l.2566 \code {attach} has the side effect of altering the search path and this ! Undefined control sequence. l.2568 People do often forget to \code {\LinkA{detach}{detach}} databases. ! Undefined control sequence. l.2568 People do often forget to \code{\LinkA {detach}{detach}} databases. ! Undefined control sequence. l.2570 In interactive use, \code {\LinkA{with}{with}} is usually preferable t... ! Undefined control sequence. l.2570 In interactive use, \code{\LinkA {with}{with}} is usually preferable t... ! Undefined control sequence. l.2571 use of \code {attach}/\code{detach}, unless \code{what} is a ! Undefined control sequence. l.2571 use of \code{attach}/\code {detach}, unless \code{what} is a ! Undefined control sequence. l.2571 ...code{attach}/\code{detach}, unless \code {what} is a ! Undefined control sequence. l.2572 \code {\LinkA{save}{save}()}-produced file in which case ! Undefined control sequence. l.2572 \code{\LinkA {save}{save}()}-produced file in which case ! Undefined control sequence. l.2573 \code {attach()} is a (safety) wrapper for \code{\LinkA{load}{load}()}. ! Undefined control sequence. l.2573 ...ttach()} is a (safety) wrapper for \code {\LinkA{load}{load}()}. ! Undefined control sequence. l.2573 ...} is a (safety) wrapper for \code{\LinkA {load}{load}()}. ! Undefined control sequence. l.2576 that is their purpose. Often \code {\LinkA{with}{with}} can be used w... ! Undefined control sequence. l.2576 that is their purpose. Often \code{\LinkA {with}{with}} can be used w... ! Undefined control sequence. l.2580 \item Always use a distinctive \code {name} argument, and ! Undefined control sequence. l.2581 \item To immediately follow the \code {attach} call by an ! Undefined control sequence. l.2582 \code {\LinkA{on.exit}{on.exit}} call to \code{detach} using the disti... ! Undefined control sequence. l.2582 \code{\LinkA {on.exit}{on.exit}} call to \code{detach} using the disti... ! Undefined control sequence. l.2582 ...{\LinkA{on.exit}{on.exit}} call to \code {detach} using the distinc... ! Undefined control sequence. l.2587 ...s interrupted or if code after the \code {attach} call ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2589 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2591 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2595 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2597 \begin{SeeAlso} \relax ! Undefined control sequence. l.2598 \code {\LinkA{library}{library}}, \code{\LinkA{detach}{detach}}, \code... ! Undefined control sequence. l.2598 \code{\LinkA {library}{library}}, \code{\LinkA{detach}{detach}}, \code... ! Undefined control sequence. l.2598 \code{\LinkA{library}{library}}, \code {\LinkA{detach}{detach}}, \code... ! Undefined control sequence. l.2598 ...{\LinkA{library}{library}}, \code{\LinkA {detach}{detach}}, \code{\... ! Undefined control sequence. l.2598 ...}}, \code{\LinkA{detach}{detach}}, \code {\LinkA{search}{search}}, ! Undefined control sequence. l.2598 ...de{\LinkA{detach}{detach}}, \code{\LinkA {search}{search}}, ! Undefined control sequence. l.2599 \code {\LinkA{objects}{objects}}, \code{\LinkA{environment}{environmen... ! Undefined control sequence. l.2599 \code{\LinkA {objects}{objects}}, \code{\LinkA{environment}{environmen... ! Undefined control sequence. l.2599 \code{\LinkA{objects}{objects}}, \code {\LinkA{environment}{environmen... ! Undefined control sequence. l.2599 ...{\LinkA{objects}{objects}}, \code{\LinkA {environment}{environment}... ! Undefined control sequence. l.2599 ...\LinkA{environment}{environment}}, \code {\LinkA{with}{with}}. ! Undefined control sequence. l.2599 ...environment}{environment}}, \code{\LinkA {with}{with}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2600 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2602 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2603 \begin{ExampleCode} ! You can't use `macro parameter character #' in math mode. l.2606 summary(women$height) # refers to variable 'height' in the data frame ! You can't use `macro parameter character #' in math mode. l.2608 summary(height) # The same variable now available by name ! You can't use `macro parameter character #' in math mode. l.2609 height <- height*2.54 # Don't do this. It creates a new variable ! You can't use `macro parameter character #' in math mode. l.2610 # in the user's workspace ! You can't use `macro parameter character #' in math mode. l.2612 summary(height) # The new variable in the workspace ! You can't use `macro parameter character #' in math mode. l.2614 summary(height) # The original variable. ! You can't use `macro parameter character #' in math mode. l.2615 height <<- height*25.4 # Change the copy in the attached environment ! You can't use `macro parameter character #' in math mode. l.2617 summary(height) # The changed copy ! You can't use `macro parameter character #' in horizontal mode. l.2619 summary(women$height) # unchanged Overfull \hbox (312.57513pt too wide) in paragraph at lines 2606--2620 []\OT1/cmr/m/n/10 summary(women$\OML/cmm/m/it/10 height\OT1/cmr/m/n/10 )\OML/cm m/m/it/10 referstovariable[]height[]inthedataframeattach\OT1/cmr/m/n/10 (\OML/c mm/m/it/10 women\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 summary\OT1/cmr/m/n/10 (\OML/ cmm/m/it/10 height\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Thesamevariablenowavailable bynameheight < Overfull \hbox (524.49838pt too wide) in paragraph at lines 2606--2620 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 height \OMS/cmsy/m/n/10 ^^C \OT1/cmr/m/n/1 0 2\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 54\OML/cmm/m/it/10 Don[]tdothis:Itcreatesa newvariableintheuser[]sworkspacefind\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 height\O T1/cmr/m/n/10 ")\OML/cmm/m/it/10 summary\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 heigh t\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Thenewvariableintheworkspacerm\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 height\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 summary\OT1/cmr/m/n /10 (\OML/cmm/m/it/10 height\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Theoriginalvariab le:height << Overfull \hbox (309.1206pt too wide) in paragraph at lines 2606--2620 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 height \OMS/cmsy/m/n/10 ^^C \OT1/cmr/m/n/1 0 25\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 4\OML/cmm/m/it/10 Changethecopyintheattac hedenvironmentfind\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 height\OT1/cmr/m/n/10 ")\O ML/cmm/m/it/10 summary\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 height\OT1/cmr/m/n/10 ) \OML/cmm/m/it/10 Thechangedcopydetach\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 women\O T1/cmr/m/n/10 ")\OML/cmm/m/it/10 summary\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 women $\OT1/cmr/m/n/10 height) ! You can't use `macro parameter character #' in vertical mode. l.2621 # # Not run: ## create an environment on the search path and populate it ! You can't use `macro parameter character #' in vertical mode. l.2621 ## Not run: ## create an environment on the search path and populate it ! You can't use `macro parameter character #' in horizontal mode. l.2621 ## Not run: # # create an environment on the search path and populate it ! You can't use `macro parameter character #' in horizontal mode. l.2621 ## Not run: ## create an environment on the search path and populate it ! You can't use `macro parameter character #' in vertical mode. l.2624 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.2624 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2625 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2626 \end{Examples} ! Undefined control sequence. l.2627 \HeaderA {attr}{Object Attributes}{attr} ! Undefined control sequence. l.2628 \aliasA {attr<\Rdash{}}{attr}{attr<.Rdash.} ! Undefined control sequence. l.2628 \aliasA{attr<\Rdash {}}{attr}{attr<.Rdash.} ! Undefined control sequence. l.2629 \keyword {attribute}{attr} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2631 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2633 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2635 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2640 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2642 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2643 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2644 \item[\code{x}] an object whose attributes are to be accessed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2645 \item[\code{which}] a non-empty character string specifying which att... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2647 \item[\code{exact}] logical: should \code{which} be matched exactly? ! Undefined control sequence. l.2647 \item[\code{exact}] logical: should \code {which} be matched exactly? [28] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2648 \item[\code{value}] an object, the new value of the attribute, or \co... ! Undefined control sequence. l.2648 ...the new value of the attribute, or \code {NULL} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2650 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2651 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2653 \begin{Details} \relax ! Undefined control sequence. l.2658 ... first looks for an exact match to \code {which} ! Undefined control sequence. l.2659 amongst the attributes of \code {x}, then (unless \code{exact = TRUE}) ! Undefined control sequence. l.2659 ...tributes of \code{x}, then (unless \code {exact = TRUE}) ! Undefined control sequence. l.2661 (Setting \code {\LinkA{options}{options}(warnPartialMatchAttr = TRUE)}... ! Undefined control sequence. l.2661 (Setting \code{\LinkA {options}{options}(warnPartialMatchAttr = TRUE)}... ! Undefined control sequence. l.2666 Note that some attributes (namely \code {\LinkA{class}{class}}, ! Undefined control sequence. l.2666 ...hat some attributes (namely \code{\LinkA {class}{class}}, ! Undefined control sequence. l.2667 \code {\LinkA{comment}{comment}}, \code{\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2667 \code{\LinkA {comment}{comment}}, \code{\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2667 \code{\LinkA{comment}{comment}}, \code {\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2667 ...{\LinkA{comment}{comment}}, \code{\LinkA {dim}{dim}}, \code{\LinkA{... ! Undefined control sequence. l.2667 ...omment}}, \code{\LinkA{dim}{dim}}, \code {\LinkA{dimnames}{dimnames}}, ! Undefined control sequence. l.2667 ...}, \code{\LinkA{dim}{dim}}, \code{\LinkA {dimnames}{dimnames}}, ! Undefined control sequence. l.2668 \code {\LinkA{names}{names}}, \code{\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2668 \code{\LinkA {names}{names}}, \code{\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2668 \code{\LinkA{names}{names}}, \code {\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2668 \code{\LinkA{names}{names}}, \code{\LinkA {row.names}{row.names}} and ! Undefined control sequence. l.2669 \code {\LinkA{tsp}{tsp}}) are treated specially and have restrictions on ! Undefined control sequence. l.2669 \code{\LinkA {tsp}{tsp}}) are treated specially and have restrictions on ! Undefined control sequence. l.2671 \code {\LinkA{levels}{levels}} which should be set for factors via the ! Undefined control sequence. l.2671 \code{\LinkA {levels}{levels}} which should be set for factors via the ! Undefined control sequence. l.2672 \code {levels} replacement function.) ! Undefined control sequence. l.2675 values of \code {which}: the replacement function does not. ! Undefined control sequence. l.2677 \code {\LinkA{NULL}{NULL}} objects cannot have attributes and attempti... ! Undefined control sequence. l.2677 \code{\LinkA {NULL}{NULL}} objects cannot have attributes and attempti... ! Undefined control sequence. l.2678 assign one by \code {attr} gives an error. ! Undefined control sequence. l.2680 Both are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2681 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2683 \begin{Value} ! Undefined control sequence. l.2684 ...value of the attribute matched, or \code {NULL} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2686 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2688 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2692 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2694 \begin{SeeAlso} \relax ! Undefined control sequence. l.2695 \code {\LinkA{attributes}{attributes}} ! Undefined control sequence. l.2695 \code{\LinkA {attributes}{attributes}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2696 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2698 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2699 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2700 # create a 2 by 5 matrix ! LaTeX Error: \begin{document} ended by \end{Exampl}]eCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2703 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2704 \end{Examples} ! Undefined control sequence. l.2705 \HeaderA {attributes}{Object Attribute Lists}{attributes} ! Undefined control sequence. l.2706 \aliasA {attributes<\Rdash{}}{attributes}{attributes<.Rdash.} ! Undefined control sequence. l.2706 \aliasA{attributes<\Rdash {}}{attributes}{attributes<.Rdash.} ! Undefined control sequence. l.2707 \aliasA {mostattributes<\Rdash{}}{attributes}{mostattributes<.Rdash.} ! Undefined control sequence. l.2707 \aliasA{mostattributes<\Rdash {}}{attributes}{mostattributes<.Rdash.} ! Undefined control sequence. l.2708 \keyword {attribute}{attributes} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2710 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2715 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2717 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2723 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2725 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2726 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2727 \item[\code{obj}] an object ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2728 \item[\code{value}] an appropriate named list of attributes, or \code... ! Undefined control sequence. l.2728 ...riate named list of attributes, or \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [2 l.2729 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2730 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2732 \begin{Details} \relax ! Undefined control sequence. l.2733 Unlike \code {\LinkA{attr}{attr}} it is possible to set attributes on a ! Undefined control sequence. l.2733 Unlike \code{\LinkA {attr}{attr}} it is possible to set attributes on a ! Undefined control sequence. l.2734 \code {NULL} object: it will first be coerced to an empty list. ! Undefined control sequence. l.2736 Note that some attributes (namely \code {\LinkA{class}{class}}, ! Undefined control sequence. l.2736 ...hat some attributes (namely \code{\LinkA {class}{class}}, ! Undefined control sequence. l.2737 \code {\LinkA{comment}{comment}}, \code{\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2737 \code{\LinkA {comment}{comment}}, \code{\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2737 \code{\LinkA{comment}{comment}}, \code {\LinkA{dim}{dim}}, \code{\Link... ! Undefined control sequence. l.2737 ...{\LinkA{comment}{comment}}, \code{\LinkA {dim}{dim}}, \code{\LinkA{... ! Undefined control sequence. l.2737 ...omment}}, \code{\LinkA{dim}{dim}}, \code {\LinkA{dimnames}{dimnames}}, ! Undefined control sequence. l.2737 ...}, \code{\LinkA{dim}{dim}}, \code{\LinkA {dimnames}{dimnames}}, ! Undefined control sequence. l.2738 \code {\LinkA{names}{names}}, \code{\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2738 \code{\LinkA {names}{names}}, \code{\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2738 \code{\LinkA{names}{names}}, \code {\LinkA{row.names}{row.names}} and ! Undefined control sequence. l.2738 \code{\LinkA{names}{names}}, \code{\LinkA {row.names}{row.names}} and ! Undefined control sequence. l.2739 \code {\LinkA{tsp}{tsp}}) are treated specially and have restrictions on ! Undefined control sequence. l.2739 \code{\LinkA {tsp}{tsp}}) are treated specially and have restrictions on ! Undefined control sequence. l.2741 \code {\LinkA{levels}{levels}} which should be set for factors via the ! Undefined control sequence. l.2741 \code{\LinkA {levels}{levels}} which should be set for factors via the ! Undefined control sequence. l.2742 \code {levels} replacement function.) ! Undefined control sequence. l.2746 names (and \code {NA} is taken as \code{"NA"}, not a missing value). ! Undefined control sequence. l.2746 names (and \code{NA} is taken as \code {"NA"}, not a missing value). ! Undefined control sequence. l.2749 \code {dim} attribute and then the remaining attributes in the order ! Undefined control sequence. l.2750 given: this ensures that setting a \code {dim} attribute always precedes ! Undefined control sequence. l.2751 the \code {dimnames} attribute. ! Undefined control sequence. l.2753 The \code ] {mostattributes} assignment takes special care for the ! Undefined control sequence. l.2754 \code {\LinkA{dim}{dim}}, \code{\LinkA{names}{names}} and \code{\LinkA... ! Undefined control sequence. l.2754 \code{\LinkA {dim}{dim}}, \code{\LinkA{names}{names}} and \code{\LinkA... ! Undefined control sequence. l.2754 \code{\LinkA{dim}{dim}}, \code {\LinkA{names}{names}} and \code{\LinkA... ! Undefined control sequence. l.2754 \code{\LinkA{dim}{dim}}, \code{\LinkA {names}{names}} and \code{\LinkA... ! Undefined control sequence. l.2754 ...}, \code{\LinkA{names}{names}} and \code {\LinkA{dimnames}{dimnames}} ! Undefined control sequence. l.2754 ...e{\LinkA{names}{names}} and \code{\LinkA {dimnames}{dimnames}} ! Undefined control sequence. l.2756 \code {attributes} assignment would give an error if any are not. It ! Undefined control sequence. l.2759 \code {\LinkA{row.names}{row.names}} are assigned correctly for data f... ! Undefined control sequence. l.2759 \code{\LinkA {row.names}{row.names}} are assigned correctly for data f... [29 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc] ! Undefined control sequence. l.2763 \code {attributes}). ! Undefined control sequence. l.2765 \code {\LinkA{NULL}{NULL}} objects cannot have attributes and attempts to ! Undefined control sequence. l.2765 \code{\LinkA {NULL}{NULL}} objects cannot have attributes and attempts to ! Undefined control sequence. l.2768 ...ssignment and replacement forms of \code {attributes} are ! Undefined control sequence. l.2769 \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2770 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2772 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2776 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2778 \begin{SeeAlso} \relax ! Undefined control sequence. l.2779 \code {\LinkA{attr}{attr}}, \code{\LinkA{structure}{structure}}. ! Undefined control sequence. l.2779 \code{\LinkA {attr}{attr}}, \code{\LinkA{structure}{structure}}. ! Undefined control sequence. l.2779 \code{\LinkA{attr}{attr}}, \code {\LinkA{structure}{structure}}. ! Undefined control sequence. l.2779 \code{\LinkA{attr}{attr}}, \code{\LinkA {structure}{structure}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2780 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2782 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2783 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2784 x <- cbind(a = 1:3, pi = pi) # simple matrix with dimnames ! You can't use `macro parameter character #' in vertical mode. l.2787 # # strip an object's attributes: ! You can't use `macro parameter character #' in vertical mode. l.2787 ## strip an object's attributes: ! You can't use `macro parameter character #' in horizontal mode. l.2789 x # now just a vector of length 6 ! You can't use `macro parameter character #' in horizontal mode. l.2793 x # dim(), but not {dim}names ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2794 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2795 \end{Examples} ! Undefined control sequence. l.2796 \HeaderA {autoload}{On-demand Loading of Packages}{autoload} ! Undefined control sequence. l.2797 \aliasA {.Autoloaded}{autoload}{.Autoloaded} ! Undefined control sequence. l.2798 \aliasA {.AutoloadEnv}{autoload}{.AutoloadEnv} ! Undefined control sequence. l.2799 \aliasA {autoloader}{autoload}{autoloader} ! Undefined control sequence. l.2800 \aliasA {Autoloads}{autoload}{Autoloads} ! Undefined control sequence. l.2801 \keyword {data}{autoload} ! Undefined control sequence. l.2802 \keyword {programming}{autoload} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2804 \begin{Description} \relax ! Undefined control sequence. l.2805 \code {autoload} creates a promise-to-evaluate \code{autoloader} and ! Undefined control sequence. l.2805 ...oad} creates a promise-to-evaluate \code {autoloader} and ! Undefined control sequence. l.2806 stores it with name \code {name} in \code{.AutoloadEnv} environment. ! Undefined control sequence. l.2806 stores it with name \code{name} in \code {.AutoloadEnv} environment. ! Undefined control sequence. l.2807 When \R {} attempts to evaluate \code{name}, \code{autoloader} is run, ! Undefined control sequence. l.2807 When \R{} attempts to evaluate \code {name}, \code{autoloader} is run, ! Undefined control sequence. l.2807 ... attempts to evaluate \code{name}, \code {autoloader} is run, ! Undefined control sequence. l.2808 the package is loaded and \code {name} is re-evaluated in the new ! Undefined control sequence. l.2809 ...ge's environment. The result is that \R {} behaves as if ! Undefined control sequence. l.2810 \code {file} was loaded but it does not occupy memory. ! Undefined control sequence. l.2812 \code {.Autoloaded} contains the names of the packages for ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2814 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2816 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2824 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2826 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2827 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2828 \item[\code{name}] string giving the name of an object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2829 \item[\code{package}] string giving the name of a package containing ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2830 \item[\code{reset}] logical: for internal use by \code{autoloader}. ! Undefined control sequence. l.2830 ...set}] logical: for internal use by \code {autoloader}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2831 \item[\code{...}] other arguments to \code{\LinkA{library}{library}}. ! Undefined control sequence. l.2831 \item[\code{...}] other arguments to \code {\LinkA{library}{library}}. ! Undefined control sequence. l.2831 ...de{...}] other arguments to \code{\LinkA {library}{library}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2832 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2833 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2835 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2837 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2839 \begin{SeeAlso} \relax ! Undefined control sequence. l.2840 \code {\LinkA{delayedAssign}{delayedAssign}}, \code{\LinkA{library}{li... ! Undefined control sequence. l.2840 \code{\LinkA {delayedAssign}{delayedAssign}}, \code{\LinkA{library}{li... ! Undefined control sequence. l.2840 ...kA{delayedAssign}{delayedAssign}}, \code {\LinkA{library}{library}} ! Undefined control sequence. l.2840 ...yedAssign}{delayedAssign}}, \code{\LinkA {library}{library}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2841 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2843 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2844 \begin{ExampleCode} ! Missing $ inserted. $ l.2852 y <- x^ 2 ! You can't use `macro parameter character #' in math mode. l.2854 search() # # now has splines ! You can't use `macro parameter character #' in math mode. l.2854 search() ## now has splines ! You can't use `macro parameter character #' in math mode. l.2858 search() # # and again ! You can't use `macro parameter character #' in math mode. l.2858 search() ## and again ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2860 \end{ExampleCode} ! Missing $ inserted. $ l.2860 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2861 \end{Examples} ! Undefined control sequence. l.2862 \HeaderA {backsolve}{Solve an Upper or Lower Triangular System}{backso... ! Undefined control sequence. l.2863 \aliasA {forwardsolve}{backsolve}{forwardsolve} ! Undefined control sequence. l.2864 \keyword {algebra}{backsolve} ! Undefined control sequence. l.2865 \keyword {array}{backsolve} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2867 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2869 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2871 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 2851--2872 []\OT1/cmr/m/n/10 x <- sort(stats::rnorm(12)) y <- x$[]\OML/cmm/m/it/10 is < Underfull \hbox (badness 10000) in paragraph at lines 2851--2872 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 interpSpline\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 x; y\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 search\OT1/cmr/m/n/10 ()\OML/cmm/m/it /10 nowhassplinesdetach\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 package \OT1/cmr/m/n/ 10 : Underfull \hbox (badness 10000) in paragraph at lines 2851--2872 \OML/cmm/m/it/10 splines\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 search\OT1/cmr/m/n/1 0 ()\OML/cmm/m/it/10 is\OT1/cmr/m/n/10 2 \OML/cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^ @\OML/cmm/m/it/10 interpSpline\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; y \OT1/cmr/m /n/10 + Underfull \hbox (badness 1527) in paragraph at lines 2851--2872 \OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 search\OT1/cmr/m/n/10 ()\OM L/cmm/m/it/10 andagaindetach\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 package \OT1/cmr /m/n/10 : \OML/cmm/m/it/10 splines\OT1/cmr/m/n/10 ")$ back-solve-Solve an Up- [30 [-1] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2878 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2880 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2881 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2882 \item[\code{r, l}] an upper (or lower) triangular matrix giving the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2885 \item[\code{x}] a matrix whose columns give the right-hand sides for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2887 \item[\code{k}] The number of columns of \code{r} and rows of \code{x... ! Undefined control sequence. l.2887 ...\code{k}] The number of columns of \code {r} and rows of \code{x} t... ! Undefined control sequence. l.2887 ...of columns of \code{r} and rows of \code {x} to use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2888 \item[\code{upper.tri}] logical; if \code{TRUE} (default), the \emph{... ! Undefined control sequence. l.2888 \item[\code{upper.tri}] logical; if \code {TRUE} (default), the \emph{... ! Undefined control sequence. l.2889 \emph{tri}angular part of \code {r} is used. Otherwise, the lower one. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2890 \item[\code{transpose}] logical; if \code{TRUE}, solve \eqn{r' * y = ... ! Undefined control sequence. l.2890 \item[\code{transpose}] logical; if \code {TRUE}, solve \eqn{r' * y = ... ! Undefined control sequence. l.2890 ...se}] logical; if \code{TRUE}, solve \eqn {r' * y = x}{} for ! Undefined control sequence. l.2891 \eqn {y}{}, i.e., \code{t(r) \%*\% y == x}. ! Undefined control sequence. l.2891 \eqn{y}{}, i.e., \code {t(r) \%*\% y == x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2892 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2893 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2895 \begin{Details} \relax ! Undefined control sequence. l.2900 \code {x <- backsolve (R, b)} solves \eqn{R x = b}{}, and\\{} ! Undefined control sequence. l.2900 \code{x <- backsolve (R, b)} solves \eqn {R x = b}{}, and\\{} ! Undefined control sequence. l.2901 \code {x <- forwardsolve(L, b)} solves \eqn{L x = b}{}, respectively. ! Undefined control sequence. l.2901 \code{x <- forwardsolve(L, b)} solves \eqn {L x = b}{}, respectively. ! Undefined control sequence. l.2903 The \code {r}/\code{l} must have at least \code{k} rows and columns, ! Undefined control sequence. l.2903 The \code{r}/\code {l} must have at least \code{k} rows and columns, ! Undefined control sequence. l.2903 ...ode{r}/\code{l} must have at least \code {k} rows and columns, ! Undefined control sequence. l.2904 and \code {x} must have at least \code{k} rows. ! Undefined control sequence. l.2904 and \code{x} must have at least \code {k} rows. ! Undefined control sequence. l.2906 ...apper for the level-3 BLAS routine \code {dtrsm}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2907 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2909 \begin{Value} ! Undefined control sequence. l.2911 \code {x} is a vector and a matrix if \code{x} is a matrix. ! Undefined control sequence. l.2911 \code{x} is a vector and a matrix if \code {x} is a matrix. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2912 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2914 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2921 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2923 \begin{SeeAlso} \relax ! Undefined control sequence. l.2924 \code {\LinkA{chol}{chol}}, ! Undefined control sequence. l.2924 \code{\LinkA {chol}{chol}}, ! Undefined control sequence. l.2925 \code {\LinkA{qr}{qr}}, ! Undefined control sequence. l.2925 \code{\LinkA {qr}{qr}}, ! Undefined control sequence. l.2926 \code {\LinkA{solve}{solve}}. ! Undefined control sequence. l.2926 \code{\LinkA {solve}{solve}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2927 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2929 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2930 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2931 # # upper triangular matrix 'r': ! You can't use `macro parameter character #' in horizontal mode. l.2931 ## upper triangular matrix 'r': ! You can't use `macro parameter character #' in horizontal mode. l.2935 ( y <- backsolve(r, x <- c(8,4,2)) ) # -1 3 1 ! You can't use `macro parameter character #' in horizontal mode. l.2937 backsolve(r, x, transpose = TRUE) # 8 -12 -5 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2938 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2939 \end{Examples} ! Undefined control sequence. l.2940 \HeaderA {basename}{Manipulate File Paths}{basename} ! Undefined control sequence. l.2941 \aliasA {dirname}{basename}{dirname} ! Undefined control sequence. l.2942 \keyword {file}{basename} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2944 \begin{Description} \relax ! Undefined control sequence. l.2945 \code {basename} removes all of the path up to and including the last ! Undefined control sequence. l.2948 \code {dirname} returns the part of the \code{path} up to but ! Undefined control sequence. l.2948 ...e{dirname} returns the part of the \code {path} up to but ! Undefined control sequence. l.2949 excluding the last path separator, or \code {"."} if there is no path ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2951 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.2953 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2958 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2960 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2961 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2962 \item[\code{path}] character vector, containing path names. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2963 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2964 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2966 \begin{Details} \relax ! Undefined control sequence. l.2967 For \code {dirname} \LinkA{tilde expansion}{tilde expansion} of the pa... ! Undefined control sequence. l.2967 For \code{dirname} \LinkA {tilde expansion}{tilde expansion} of the pa... ! Undefined control sequence. l.2970 and for \code {dirname} any trailing file separators are removed ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2972 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2974 \begin{Value} ! Undefined control sequence. l.2975 ...acter vector of the same length as \code {path}. A zero-length ! Undefined control sequence. l.2979 directory, so \code {dirname} returns \code{"."}. ! Undefined control sequence. l.2979 directory, so \code{dirname} returns \code {"."}. ! Undefined control sequence. l.2981 If an element of \code {path} is \code{\LinkA{NA}{NA}}, so is the result. ! Undefined control sequence. l.2981 If an element of \code{path} is \code {\LinkA{NA}{NA}}, so is the result. ! Undefined control sequence. l.2981 ...n element of \code{path} is \code{\LinkA {NA}{NA}}, so is the result. ! Undefined control sequence. l.2983 \code {""} is not a valid pathname, but is returned unchanged. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2984 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2986 \begin{Section} {Behaviour on Windows} ! Undefined control sequence. l.2987 On Windows this will accept either \code {\bsl{}} or \code{/} as the path ! Undefined control sequence. l.2987 ...ndows this will accept either \code{\bsl {}} or \code{/} as the path ! Undefined control sequence. l.2987 ...ill accept either \code{\bsl{}} or \code {/} as the path ! Undefined control sequence. l.2988 separator, but \code {dirname} will return a path using \code{/} ! Undefined control sequence. l.2988 ...{dirname} will return a path using \code {/} ! Undefined control sequence. l.2989 ... a network share, when the leading \code {\bsl{}\bsl{}} will be ! Undefined control sequence. l.2989 ...twork share, when the leading \code{\bsl {}\bsl{}} will be ! Undefined control sequence. l.2989 ...share, when the leading \code{\bsl{}\bsl {}} will be ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2994 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2996 \begin{Note} \relax ! Undefined control sequence. l.2998 names: in particular they do \strong {not} have the special handling of ! Undefined control sequence. l.2999 the path \code {"/"} and of returning \code{"."} for empty strings. ! Undefined control sequence. l.2999 the path \code{"/"} and of returning \code {"."} for empty strings. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3000 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3002 \begin{SeeAlso} \relax ! Undefined control sequence. l.3003 \code {\LinkA{file.path}{file.path}}, \code{\LinkA{path.expand}{path.e... ! Undefined control sequence. l.3003 \code{\LinkA {file.path}{file.path}}, \code{\LinkA{path.expand}{path.e... ! Undefined control sequence. l.3003 \code{\LinkA{file.path}{file.path}}, \code {\LinkA{path.expand}{path.e... ! Undefined control sequence. l.3003 ...nkA{file.path}{file.path}}, \code{\LinkA {path.expand}{path.expand}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3004 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3006 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3007 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3010 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3011 \end{Examples} ! Undefined control sequence. l.3012 \HeaderA {Bessel}{Bessel Functions}{Bessel} ! Undefined control sequence. l.3013 \aliasA {bessel}{Bessel}{bessel} ! Undefined control sequence. l.3014 \aliasA {besselI}{Bessel}{besselI} ! Undefined control sequence. l.3015 \aliasA {besselJ}{Bessel}{besselJ} ! Undefined control sequence. l.3016 \aliasA {besselK}{Bessel}{besselK} ! Undefined control sequence. l.3017 \aliasA {besselY}{Bessel}{besselY} ! Undefined control sequence. l.3018 \keyword {math}{Bessel} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3020 \begin{Description} \relax ! Undefined control sequence. l.3022 and second kind, \eqn {J_{\nu}}{} and \eqn{Y_{\nu}}{}, and ! Missing $ inserted. $ l.3022 and second kind, \eqn{J_ {\nu}}{} and \eqn{Y_{\nu}}{}, and ! Extra }, or forgotten $. l.3022 and second kind, \eqn{J_{\nu}} {} and \eqn{Y_{\nu}}{}, and ! Undefined control sequence. l.3022 and second kind, \eqn{J_{\nu}}{} and \eqn {Y_{\nu}}{}, and ! Undefined control sequence. l.3024 \eqn {I_{\nu}}{} and \eqn{K_{\nu}}{}. ! Undefined control sequence. l.3024 \eqn{I_{\nu}}{} and \eqn {K_{\nu}}{}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3025 \end{Description} ! Missing $ inserted. $ l.3025 \end{Description} ! Missing } inserted. } l.3025 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3027 \begin{Usage} Underfull \hbox (badness 1622) in paragraph at lines 2993--3028 []\OT1/cmr/m/n/10 UTF-8-encoded path names not valid in the cur-rent lo-cale ca n be Underfull \hbox (badness 1102) in paragraph at lines 2993--3028 \OT1/cmr/m/n/10 path "/" and of re-turn-ing "." for empty strings. file.pathfi le.path, Underfull \hbox (badness 1354) in paragraph at lines 2993--3028 \OT1/cmr/m/n/10 path.expandpath.expand. base-name(file.path("","p1","p2","p3 ", Underfull \hbox (badness 10000) in paragraph at lines 2993--3028 \OT1/cmr/m/n/10 c("file1", "file2"))) dirname(file.path("","p1","p2","p3","file name")) Underfull \hbox (badness 10000) in paragraph at lines 2993--3028 \OT1/cmr/m/n/10 BesselBessel Func-tions-Bessel besselBesselbessel besse-lIBesse lbesselI Underfull \hbox (badness 1565) in paragraph at lines 2993--3028 \OT1/cmr/m/n/10 besselJBesselbesselJ besselKBesselbesselK besselYBesselbesselY mathBessel [31] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3034 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3036 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3037 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3038 \item[\code{x}] numeric, \eqn{\ge 0}{}. ! Undefined control sequence. l.3038 \item[\code{x}] numeric, \eqn {\ge 0}{}. ! Missing $ inserted. $ l.3038 \item[\code{x}] numeric, \eqn{\ge 0}{}. ! Extra }, or forgotten $. l.3038 \item[\code{x}] numeric, \eqn{\ge 0} {}. ! Missing $ inserted. $ l.3039 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3040 \item[\code{nu}] numeric; The \emph{order} (maybe fractional!) of the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3043 \item[\code{expon.scaled}] logical; if \code{TRUE}, the results are ! Undefined control sequence. l.3043 ...m[\code{expon.scaled}] logical; if \code {TRUE}, the results are ! Undefined control sequence. l.3045 (\eqn {I_{\nu}}{}) or underflow (\eqn{K_{\nu}}{}), ! Missing $ inserted. $ l.3045 (\eqn{I_ {\nu}}{}) or underflow (\eqn{K_{\nu}}{}), ! Extra }, or forgotten $. l.3045 (\eqn{I_{\nu}} {}) or underflow (\eqn{K_{\nu}}{}), ! Undefined control sequence. l.3045 (\eqn{I_{\nu}}{}) or underflow (\eqn {K_{\nu}}{}), ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3047 \end{ldescription} ! Missing $ inserted. $ l.3047 \end{ldescription} ! Missing } inserted. } l.3047 \end{ldescription} ! Missing } inserted. } l.3047 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3048 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3050 \begin{Details} \relax ! Undefined control sequence. l.3051 If \code {expon.scaled = TRUE}, \eqn{e^{-x} I_{\nu}(x)}{}, ! Undefined control sequence. l.3051 If \code{expon.scaled = TRUE}, \eqn {e^{-x} I_{\nu}(x)}{}, ! Missing $ inserted. $ l.3051 If \code{expon.scaled = TRUE}, \eqn{e^ {-x} I_{\nu}(x)}{}, ! Extra }, or forgotten $. l.3051 ....scaled = TRUE}, \eqn{e^{-x} I_{\nu}(x)} {}, ! Undefined control sequence. l.3052 or \eqn {e^{x} K_{\nu}(x)}{} are returned. ! Missing $ inserted. $ l.3053 Underfull \hbox (badness 3503) in paragraph at lines 3043--3053 \OT1/cmr/m/n/10 over-flow (I$[][])\OML/cmm/m/it/10 orunderflow\OT1/cmr/m/n/10 ( [][])\OML/cmm/m/it/10 ; respectively:$ \OT1/cmr/m/n/10 If ex-pon.scaled = TRUE , ! Undefined control sequence. l.3054 For \eqn {\nu < 0}{}, formulae 9.1.2 and 9.6.2 from Abramowitz \& ! Missing $ inserted. $ l.3054 For \eqn{\nu < 0}{}, formulae 9.1.2 and 9.6.2 from Abramowitz \& ! Extra }, or forgotten $. l.3054 For \eqn{\nu < 0} {}, formulae 9.1.2 and 9.6.2 from Abramowitz \& ! Undefined control sequence. l.3056 \code {besselK} which is symmetric in \code{nu}. ! Undefined control sequence. l.3056 \code{besselK} which is symmetric in \code {nu}. ! Missing $ inserted. $ l.3057 Overfull \hbox (300.72737pt too wide) in paragraph at lines 3054--3057 []\OT1/cmr/m/n/10 For $\OML/cmm/m/it/10 ^^W < \OT1/cmr/m/n/10 0[]\OML/cmm/m/it/ 10 ; formulae\OT1/cmr/m/n/10 9\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/ 10 :\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 and\OT1/cmr/m/n/10 9\OML/cmm/m/it/10 :\OT 1/cmr/m/n/10 6\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 fromAbramowit z\OT1/cmr/m/n/10 &\OML/cmm/m/it/10 Stegunareapplied\OT1/cmr/m/n/10 (\OML/cmm/m/ it/10 whichisprobablysuboptimal\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; exceptfor[]w hichissymmetricin[]:$ ! Undefined control sequence. l.3060 the precision is perfect. For large \code {nu}, say in the order of ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3062 \end{Details} ! Missing } inserted. } l.3062 \end{Details} ! Missing } inserted. } l.3062 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3064 \begin{Value} ! Undefined control sequence. l.3065 Numeric vector with the (scaled, if \code {expon.scaled = TRUE}) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3070 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3072 \begin{Author} \relax ! Undefined control sequence. [-2 l.3075 Translation to C and adaptation to \R {}: ! Undefined control sequence. l.3076 Martin Maechler \email {maechler@stat.math.ethz.ch}. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3077 \end{Author} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3079 \begin{Source} \relax ! Undefined control sequence. l.3081 \url {http://www.netlib.org/specfun/ribesl}, \samp{../rjbesl}, etc. ! Undefined control sequence. l.3081 ...://www.netlib.org/specfun/ribesl}, \samp {../rjbesl}, etc. Underfull \hbox (badness 8170) in paragraph at lines 3068--3085 \OT1/cmr/m/n/10 Trans-la-tion to C and adap-ta-tion to : Mar-tin Maech-ler maec h- Underfull \hbox (badness 10000) in paragraph at lines 3087--3089 []\OT1/cmr/m/n/10 based on (code) by David J. Sookne, see Sookne Underfull \hbox (badness 1824) in paragraph at lines 3087--3089 \OT1/cmr/m/n/10 (1973)...Modifications...An ear-lier ver-sion was pub-lished in Cody ! Undefined control sequence. l.3089 \item[besselJ] as \code {besselI} ! Undefined control sequence. l.3092 \eqn {Y}{}\dots and on Campbell's programs for \eqn{Y_\nu(x)}{} ! Undefined control sequence. l.3092 ...dots and on Campbell's programs for \eqn {Y_\nu(x)}{} ! Missing $ inserted. $ l.3092 ...s and on Campbell's programs for \eqn{Y_ \nu(x)}{} ! Extra }, or forgotten $. l.3092 ...n Campbell's programs for \eqn{Y_\nu(x)} {} ! Missing $ inserted. $ l.3094 ! Missing } inserted. } l.3094 ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3097 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3099 \begin{References} \relax ! Undefined control sequence. l.3108 \emph{NBS Jour. of Res. B.} \bold {77B}, 125--132. ! Undefined control sequence. l.3112 ...sactions on Mathematical Software} \bold {9}(2), 242--245. ! Undefined control sequence. l.3116 ...sactions on Mathematical Software} \bold {6}(4), 581--586. [32] ! Undefined control sequence. l.3120 \emph{Comp. Phy. Comm.} \bold {18}, 133--142. ! Undefined control sequence. l.3124 \emph{J. Comput. Phys.} \bold {21}, 343--350. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3126 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3128 \begin{SeeAlso} \relax ! Undefined control sequence. l.3130 \code {\LinkA{gamma}{gamma}}, \eqn{\Gamma(x)}{}, and \code{\LinkA{beta... ! Undefined control sequence. l.3130 \code{\LinkA {gamma}{gamma}}, \eqn{\Gamma(x)}{}, and \code{\LinkA{beta... ! Undefined control sequence. l.3130 \code{\LinkA{gamma}{gamma}}, \eqn {\Gamma(x)}{}, and \code{\LinkA{beta... ! Missing $ inserted. $ l.3130 \code{\LinkA{gamma}{gamma}}, \eqn{\Gamma (x)}{}, and \code{\LinkA{beta... ! Extra }, or forgotten $. l.3130 ...e{\LinkA{gamma}{gamma}}, \eqn{\Gamma(x)} {}, and \code{\LinkA{beta}... ! Undefined control sequence. l.3130 ...a}{gamma}}, \eqn{\Gamma(x)}{}, and \code {\LinkA{beta}{beta}}, ! Undefined control sequence. l.3130 ...a}}, \eqn{\Gamma(x)}{}, and \code{\LinkA {beta}{beta}}, ! Undefined control sequence. l.3131 \eqn {B(x)}{}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3132 \end{SeeAlso} ! Missing $ inserted. $ l.3132 \end{SeeAlso} ! Missing } inserted. } l.3132 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3134 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3135 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 3129--3137 \OT1/cmr/m/n/10 Other spe-cial math-e-mat-i-cal func-tions, such as gam-magamma , ! Missing $ inserted. $ l.3142 main = "Bessel Functions I_ nu(x)") ! Missing $ inserted. $ l.3145 ! Missing $ inserted. $ l.3148 main = "Bessel Functions J_ nu(x)") ! Missing $ inserted. $ l.3151 Underfull \hbox (badness 4713) in paragraph at lines 3146--3151 []\OT1/cmr/m/n/10 x <- seq(0, 40, length.out = 801); yl <- c(-.8, .8) plot(x, x , Underfull \hbox (badness 5189) in paragraph at lines 3146--3151 \OT1/cmr/m/n/10 ylim = yl, ylab = "", type = "n", main = "Bessel Func-tions Underfull \hbox (badness 10000) in paragraph at lines 3146--3151 \OT1/cmr/m/n/10 J$[]\OML/cmm/m/it/10 u\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/c mr/m/n/10 )")\OML/cmm/m/it/1]0 for\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nuinnus\OT1/ cmr/m/n/10 )\OML/cmm/m/it/10 lines\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; besselJ\ OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; nu \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 nu\OT 1/cmr/m/n/10 )\OML/cmm/m/it/10 ; col \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 nu \OT1 /cmr/m/n/10 + ! You can't use `macro parameter character #' in vertical mode. l.3152 # # Negative nu's : ! You can't use `macro parameter character #' in vertical mode. l.3152 ## Negative nu's : ! Missing $ inserted. $ l.3164 x0 <- 2^ (-20:10) ! Undefined control sequence. l.3166 ...n = "Bessel Functions J_nu(x) near 0\n log - log scale") ! Missing $ inserted. $ l.3171 Underfull \hbox (badness 10000) in paragraph at lines 3164--3171 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 BesselFunctionsJ[]u\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 near\OT1/cmr/m/n/10 0\OML/cmm/m/it/1 0 log \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 logscale\OT1/cmr/m/n/10 ")\OML/cmm/ m/it/10 for\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nuinsort\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 c\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nus; nus \OT1/cmr/m/n/10 + ! Missing $ inserted. $ l.3172 plot(x0, x0^ -8, log = "xy", ylab = "", type = "n", ! Undefined control sequence. l.3173 ...n = "Bessel Functions K_nu(x) near 0\n log - log scale") ! Missing $ inserted. $ l.3178 Underfull \hbox (badness 5504) in paragraph at lines 3172--3178 []\OT1/cmr/m/n/10 plot(x0, x0$[]8\OML/cmm/m/it/10 ; log \OT1/cmr/m/n/10 = "\OML /cmm/m/it/10 xy\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; ylab \OT1/cmr/m/n/10 = ""\OM L/cmm/m/it/10 ; type \OT1/cmr/m/n/10 = "\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 "\OML /cmm/m/it/10 ; main \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 3172--3178 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 BesselFunctionsK[]u\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 near\OT1/cmr/m/n/10 0\OML/cmm/m/it/1 0 log \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 logscale\OT1/cmr/m/n/10 ")\OML/cmm/ m/it/10 for\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nuinsort\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 c\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nus; nus \OT1/cmr/m/n/10 + ! Missing $ inserted. $ l.3181 main = "Bessel Functions K_ nu(x)") ! Missing $ inserted. $ l.3184 ! Missing $ inserted. $ l.3187 main = "Bessel Functions Y_ nu(x)") ! Missing $ inserted. $ l.3193 Underfull \hbox (badness 10000) in paragraph at lines 3185--3193 []\OT1/cmr/m/n/10 yl <- c(-1.6, .6) plot(x, x, ylim = yl, ylab Underfull \hbox (badness 10000) in paragraph at lines 3185--3193 \OT1/cmr/m/n/10 = "", type = "n", main = "Bessel Func-tions Overfull \hbox (154.71585pt too wide) in paragraph at lines 3185--3193 \OT1/cmr/m/n/10 Y$[]\OML/cmm/m/it/10 u\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/c mr/m/n/10 )")\OML/cmm/m/it/10 for\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nuinnus\OT1/ cmr/m/n/10 )[]\OML/cmm/m/it/10 legend\OT1/cmr/m/n/10 (25\OML/cmm/m/it/10 ; \OMS /cmsy/m/n/10 ^^@\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 5\OML/cmm/m/it/10 ; legend \O T1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.3194 # # negative nu in bessel_Y -- was bogus for a long time ! You can't use `macro parameter character #' in vertical mode. l.3194 ## negative nu in bessel_Y -- was bogus for a long time ! Missing $ inserted. $ l.3194 ## negative nu in bessel_ Y -- was bogus for a long time ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3200 \end{ExampleCode} ! Missing $ inserted. $ l.3200 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3201 \end{Examples} ! Undefined control sequence. l.3202 \HeaderA {bindenv}{Binding and Environment Locking, Active Bindings}{b... ! Undefined control sequence. l.3203 \aliasA {bindingIsActive}{bindenv}{bindingIsActive} ! Undefined control sequence. l.3204 \aliasA {bindingIsLocked}{bindenv}{bindingIsLocked} ! Undefined control sequence. l.3205 \aliasA {environmentIsLocked}{bindenv}{environmentIsLocked} ! Undefined control sequence. l.3206 \aliasA {lockBinding}{bindenv}{lockBinding} ! Undefined control sequence. l.3207 \aliasA {lockEnvironment}{bindenv}{lockEnvironment} ! Undefined control sequence. l.3208 \aliasA {makeActiveBinding}{bindenv}{makeActiveBinding} ! Undefined control sequence. l.3209 \aliasA {unlockBinding}{bindenv}{unlockBinding} ! Undefined control sequence. l.3210 \keyword {utilities}{bindenv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3212 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3217 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3219 \begin{Usage} Overfull \hbox (43.26866pt too wide) in paragraph at lines 3194--3220 []\OT1/cmr/m/n/10 negative nu in bessel$[] \OMS/cmsy/m/n/10 ^^@ ^^@\OML/cmm/m/i t/10 wasbogusforalongtimecurve\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 besselY\OT1/cmr /m/n/10 (\OML/cmm/m/it/10 x; \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 0\OML/cmm/m/it /10 :\OT1/cmr/m/n/10 1)\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 0\OML/cmm/m/it/10 ; \ OT1/cmr/m/n/10 10\OML/cmm/m/it/10 ; ylim \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 3194--3220 \OML/cmm/m/it/10 c\OT1/cmr/m/n/10 (\OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 3\OML/cm m/m/it/10 ; \OT1/cmr/m/n/10 1)\OML/cmm/m/it/10 ; ylab \OT1/cmr/m/n/10 = "")\OML /cmm/m/it/10 for\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 nuinc\OT1/cmr/m/n/10 (\OML/cm m/m/it/10 seq\OT1/cmr/m/n/10 (\OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 0\OML/cmm/m/i t/10 :\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 2 \OML/cmm/m/it/10 ; by \OT1/cmr/m/n/10 = Underfull \hbox (badness 4621) in paragraph at lines 3194--3220 \OT1/cmr/m/n/10 "" \OMS/cmsy/m/n/10 ^^C []\OT1/cmr/m/n/10 ))$ binden-vBind-ing and En-vi-ron-ment Underfull \hbox (badness 10000) in paragraph at lines 3194--3220 \OT1/cmr/m/n/10 Lock-ing, Ac-tive Bind-ings-bindenv bindingIs-Ac-tive-binden-vb indingIs-Ac-tive Underfull \hbox (badness 3343) in paragraph at lines 3194--3220 \OT1/cmr/m/n/10 men-tIs-Locked lock-Bind-ing-binden-vlock-Bind-ing lock-En-vi-r on-ment-binden-vlock- Underfull \hbox (badness 3396) in paragraph at lines 3194--3220 \OT1/cmr/m/n/10 En-vi-ron-ment make-Ac-tive-Bind-ing-binden-vmake-Ac-tive-Bind- ing un-lock-Bind-ing- [33] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3230 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3232 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3233 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3234 \item[\code{env}] an environment. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3235 \item[\code{bindings}] logical specifying whether bindings should be ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3236 \item[\code{sym}] a name object or character string. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3237 \item[\code{fun}] a function taking zero or one arguments. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3238 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3239 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3241 \begin{Details} \relax ! Undefined control sequence. l.3242 The function \code {lockEnvironment} locks its environment argument, ! Undefined control sequence. l.3250 \code {lockBinding} locks individual bindings in the specified ! Undefined control sequence. l.3255 \code {makeActiveBinding} installs \code{fun} in environment \code{env} ! Undefined control sequence. l.3255 \code{makeActiveBinding} installs \code {fun} in environment \code{env} ! Undefined control sequence. l.3255 ...installs \code{fun} in environment \code {env} ! Undefined control sequence. l.3256 so that getting the value of \code {sym} calls \code{fun} with no ! Undefined control sequence. l.3256 ...ting the value of \code{sym} calls \code [-3 {fun} with no ! Undefined control sequence. l.3257 arguments, and assigning to \code {sym} calls \code{fun} with one ! Undefined control sequence. l.3257 ... and assigning to \code{sym} calls \code {fun} with one ! Undefined control sequence. l.3259 things like C variables linked to \R {} variables and variables linked to ! Undefined control sequence. l.3260 databases, and is used to implement \code {\LinkA{setRefClass}{setRefC... ! Undefined control sequence. l.3260 ...s, and is used to implement \code{\LinkA {setRefClass}{setRefClass}... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3262 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3264 \begin{Value} ! Undefined control sequence. l.3265 The \code {bindingIsLocked} and \code{environmentIsLocked} return a ! Undefined control sequence. l.3265 The \code{bindingIsLocked} and \code {environmentIsLocked} return a ! Undefined control sequence. l.3267 \code {NULL}, invisibly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3268 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3270 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3272 \end{Author} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3274 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3275 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3276 # locking environments ! You can't use `macro parameter character #' in horizontal mode. l.3283 try(assign("y", 2, envir = e)) # error ! You can't use `macro parameter character #' in vertical mode. l.3285 # locking bindings ! You can't use `macro parameter character #' in horizontal mode. l.3290 try(assign("x", 2, envir = e)) # error ! You can't use `macro parameter character #' in vertical mode. l.3295 # active bindings ! Undefined control sequence. l.3300 cat("get\n ") ! Undefined control sequence. l.3302 cat("set\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3313 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3314 \end{Examples} ! Undefined control sequence. l.3315 \HeaderA {bitwise}{Bitwise Logical Operations}{bitwise} ! Undefined control sequence. l.3316 \aliasA {bitwAnd}{bitwise}{bitwAnd} ! Undefined control sequence. l.3317 \aliasA {bitwNot}{bitwise}{bitwNot} ! Undefined control sequence. l.3318 \aliasA {bitwOr}{bitwise}{bitwOr} ! Undefined control sequence. l.3319 \aliasA {bitwShiftL}{bitwise}{bitwShiftL} ! Undefined control sequence. l.3320 \aliasA {bitwShiftR}{bitwise}{bitwShiftR} ! Undefined control sequence. l.3321 \aliasA {bitwXor}{bitwise}{bitwXor} ! Undefined control sequence. l.3322 \keyword {logic}{bitwise} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3324 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3326 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3328 \begin{Usage} [34]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3338 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3340 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3341 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3342 \item[\code{a, b}] integer vectors; numeric vectors are coerced to in... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3343 \item[\code{n}] non-negative integer vector of values up to 31. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3344 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3345 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3347 \begin{Details} \relax ! Undefined control sequence. l.3350 ...e operations can result in integer \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3353 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3355 \begin{Value} ! Undefined control sequence. l.3359 The output element is \code {NA} if an input is \code{NA} (after ! Undefined control sequence. l.3359 ...lement is \code{NA} if an input is \code {NA} (after ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3361 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3363 \begin{SeeAlso} \relax ! Undefined control sequence. l.3364 The logical operators, \code {\LinkA{!}{!}}, \code{\LinkA{\&}{.Ramp.}}, ! Undefined control sequence. l.3364 The logical operators, \code{\LinkA {!}{!}}, \code{\LinkA{\&}{.Ramp.}}, ! Undefined control sequence. l.3364 ...l operators, \code{\LinkA{!}{!}}, \code {\LinkA{\&}{.Ramp.}}, ! Undefined control sequence. l.3364 ...tors, \code{\LinkA{!}{!}}, \code{\LinkA {\&}{.Ramp.}}, ! Undefined control sequence. l.3365 \code {\LinkA{|}{|}}, \code{\LinkA{xor}{xor}}. ! Undefined control sequence. l.3365 \code{\LinkA {|}{|}}, \code{\LinkA{xor}{xor}}. ! Undefined control sequence. l.3365 \code{\LinkA{|}{|}}, \code {\LinkA{xor}{xor}}. ! Undefined control sequence. l.3365 \code{\LinkA{|}{|}}, \code{\LinkA {xor}{xor}}. ! Undefined control sequence. l.3366 ...y these \emph{do} work bitwise for \code {\LinkA{raw}{raw}} arguments. ! Undefined control sequence. l.3366 ... \emph{do} work bitwise for \code{\LinkA {raw}{raw}} arguments. ! Undefined control sequence. l.3368 The classes \code {"\LinkA{octmode}{octmode}"} and \code{"\LinkA{hexmo... ! Undefined control sequence. l.3368 The classes \code{"\LinkA {octmode}{octmode}"} and \code{"\LinkA{hexmo... ! Undefined control sequence. l.3368 ...de{"\LinkA{octmode}{octmode}"} and \code {"\LinkA{hexmode}{hexmode}... ! Undefined control sequence. l.3368 ...kA{octmode}{octmode}"} and \code{"\LinkA {hexmode}{hexmode}"} whose ! Undefined control sequence. l.3372 Package \Rhref {https://CRAN.R-project.org/package=bitops}{\pkg{bitops... ! Undefined control sequence. l.3372 .../CRAN.R-project.org/package=bitops}{\pkg {bitops}} has similar func... ! Undefined control sequence. l.3373 differ in the way they treat integers \eqn {2^{31}}{} or larger. ! Missing $ inserted. $ l.3373 ...r in the way they treat integers \eqn{2^ {31}}{} or larger. ! Extra }, or forgotten $. l.3373 ...the way they treat integers \eqn{2^{31}} {} or larger. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3374 \end{SeeAlso} ! Missing $ inserted. $ l.3374 \end{SeeAlso} ! Missing } inserted. } l.3374 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3376 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3377 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3378 bitwNot(0:12) # -1 -2 ... -13 ! You can't use `macro parameter character #' in horizontal mode. l.3379 bitwAnd(15L, 7L) # 7 ! You can't use `macro parameter character #' in horizontal mode. l.3380 bitwOr (15L, 7L) # 15 ! You can't use `macro parameter character #' in horizontal mode. l.3381 bitwXor(15L, 7L) # 8 ! You can't use `macro parameter character #' in horizontal mode. l.3382 bitwXor(-1L, 1L) # -2 Underfull \hbox (badness 2726) in paragraph at lines 3372--3383 []\OT1/cmr/m/n/10 Package https://CRAN.R-project.org/package=bitopsbitops has s im-i-lar ! You can't use `macro parameter character #' in vertical mode. l.3384 # # The "same" for 'raw' instead of integer : ! You can't use `macro parameter character #' in vertical mode. l.3384 ## The "same" for 'raw' instead of integer : ! You can't use `macro parameter character #' in horizontal mode. l.3386 c(r15 <- as.raw(15), r7 <- as.raw(7)) # 0f 07 ! Misplaced alignment tab character &. l.3387 r15 & r7 # 07 ! You can't use `macro parameter character #' in horizontal mode. l.3387 r15 & r7 # 07 ! You can't use `macro parameter character #' in horizontal mode. l.3388 r15 | r7 # 0f ! You can't use `macro parameter character #' in horizontal mode. l.3389 xor(r15, r7)# 08 ! You can't use `macro parameter character #' in horizontal mode. l.3391 bitwShiftR(-1, 1:31) # shifts of 2^32-1 = 4294967295 ! Missing $ inserted. $ l.3391 bitwShiftR(-1, 1:31) # shifts of 2^ 32-1 = 4294967295 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3392 \end{ExampleCode} ! Missing $ inserted. $ l.3392 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3393 \end{Examples} ! Undefined control sequence. l.3394 \HeaderA {body}{Access to and Manipulation of the Body of a Function}{... ! Undefined control sequence. l.3395 \aliasA {body<\Rdash{}}{body}{body<.Rdash.} ! Undefined control sequence. l.3395 \aliasA{body<\Rdash {}}{body}{body<.Rdash.} ! Undefined control sequence. l.3396 \keyword {programming}{body} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3398 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3400 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3402 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3407 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3409 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3410 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3411 \item[\code{fun}] a function object, or see `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3412 \item[\code{envir}] environment in which the function should be defined. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3413 \item[\code{value}] an object, usually a \LinkA{language object}{lang... ! Undefined control sequence. l.3413 ...code{value}] an object, usually a \LinkA {language object}{language... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3415 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3416 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3418 \begin{Details} \relax ! Undefined control sequence. l.3419 For the first form, \code {fun} can be a character string ! Undefined control sequence. l.3422 \code {body} is used. ! Undefined control sequence. l.3425 calls to \code {\{}: see the `Examples' section for how to ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3427 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3429 \begin{Value} ! Undefined control sequence. l.3430 \code {body} returns the body of the function specified. This is ! Undefined control sequence. l.3431 normally a \LinkA {language object}{language object}, most often a cal... ! Undefined control sequence. l.3431 ...uage object}, most often a call to \code {\{}, but ! Undefined control sequence. l.3432 it can also be an object (e.g., \code {pi}) to be the return value of ! Undefined control sequence. l.3437 environment of the function. If \code {value} is of class ! Undefined control sequence. l.3438 \code {"\LinkA{expression}{expression}"} the first element is used as ... ! Undefined control sequence. l.3438 \code{"\LinkA {expression}{expression}"} the first element is used as ... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3440 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3442 \begin{SeeAlso} \relax ! Undefined control sequence. l.3443 \code {\LinkA{alist}{alist}}, ! Undefined control sequence. l.3443 \code{\LinkA {alist}{alist}}, ! Undefined control sequence. l.3444 \code {\LinkA{args}{args}}, ! Undefined control sequence. l.3444 \code{\LinkA {args}{args}}, ! Undefined control sequence. l.3445 \code {\LinkA{function}{function}}. ! Undefined control sequence. l.3445 \code{\LinkA {function}{function}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3446 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3448 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3449 \begin{ExampleCode} ! Missing $ inserted. $ l.3451 f <- function(x) x^ 5 ! You can't use `macro parameter character #' in math mode. l.3453 # # or equivalently body(f) <- expression(5^x) ! You can't use `macro parameter character #' in math mode. l.3453 ## or equivalently body(f) <- expression(5^x) ! You can't use `macro parameter character #' in math mode. l.3454 f(3) # = 125 ! Missing $ inserted. $ l.3456 ! You can't use `macro parameter character #' in vertical mode. l.3457 # # creating a multi-expression body ! You can't use `macro parameter character #' in vertical mode. l.3457 ## creating a multi-expression body ! Missing $ inserted. $ l.3458 e <- expression(y <- x^ 2, return(y)) # or a list ! You can't use `macro parameter character #' in math mode. l.3458 e <- expression(y <- x^2, return(y)) # or a list ! Missing $ inserted. $ l.3462 ! Missing } inserted. } l.3462 Underfull \hbox (badness 10000) in paragraph at lines 3457--3462 []\OT1/cmr/m/n/10 creating a multi-expression body e <- ex-pres-sion(y <- ! You can't use `macro parameter character #' in vertical mode. l.3463 # # Using substitute() may be simpler than 'as.call(c(as.name("{",..)))': ! You can't use `macro parameter character #' in vertical mode. l.3463 ## Using substitute() may be simpler than 'as.call(c(as.name("{",..)))': ! Missing $ inserted. $ l.3464 ...) [-4(identical(body(f), substitute({ y <- x^ 2; return(y) }))) ! Extra }, or forgotten $. l.3464 ...y(f), substitute({ y <- x^2; return(y) } ))) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3465 \end{ExampleCode} ! Missing $ inserted. $ l.3465 \end{ExampleCode} ! Missing } inserted. } l.3465 \end{ExampleCode} ! Missing } inserted. } l.3465 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3466 \end{Examples} ! Undefined control sequence. l.3467 \HeaderA {bquote}{Partial substitution in expressions}{bquote} ! Undefined control sequence. l.3468 \keyword {programming}{bquote} ! Undefined control sequence. l.3469 \keyword {data}{bquote} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3471 \begin{Description} \relax ! Undefined control sequence. l.3472 ...ogue of the LISP backquote macro. \code {bquote} quotes its ! Undefined control sequence. l.3473 argument except that terms wrapped in \code {.()} are evaluated in the ! Undefined control sequence. l.3474 specified \code {where} environment. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3475 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3477 \begin{Usage} Underfull \hbox (badness 5231) in paragraph at lines 3463--3478 []\OT1/cmr/m/n/10 Using sub-sti-tute() may be sim-pler than 'as.call(c(as.name( "",..)))': [35] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3481 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3483 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3484 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3485 \item[\code{expr}] A \LinkA{language object}{language object}. ! Undefined control sequence. l.3485 \item[\code{expr}] A \LinkA {language object}{language object}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3486 \item[\code{where}] An environment. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3487 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3488 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3490 \begin{Value} ! Undefined control sequence. l.3491 A \LinkA {language object}{language object}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3492 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3494 \begin{SeeAlso} \relax ! Undefined control sequence. l.3495 \code {\LinkA{quote}{quote}}, \code{\LinkA{substitute}{substitute}} ! Undefined control sequence. l.3495 \code{\LinkA {quote}{quote}}, \code{\LinkA{substitute}{substitute}} ! Undefined control sequence. l.3495 \code{\LinkA{quote}{quote}}, \code {\LinkA{substitute}{substitute}} ! Undefined control sequence. l.3495 \code{\LinkA{quote}{quote}}, \code{\LinkA {substitute}{substitute}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc l.3496 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3498 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3499 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.3512 # # to set a function default arg ! You can't use `macro parameter character #' in vertical mode. l.3512 ## to set a function default arg ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3515 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3516 \end{Examples} ! Undefined control sequence. l.3517 \HeaderA {browser}{Environment Browser}{browser} ! Undefined control sequence. l.3518 \keyword {programming}{browser} ! Undefined control sequence. l.3519 \keyword {environment}{browser} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3521 \begin{Description} \relax ! Undefined control sequence. l.3523 the environment where \code {browser} was called from. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3524 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3526 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3530 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3532 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3533 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3534 \item[\code{text}] a text string that can be retrieved once the brows... ! LaTeX Error: Lonely \item--perhaps a missing li) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.tocst environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3535 \item[\code{condition}] a condition that can be retrieved once the br... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3537 \item[\code{expr}] An expression, which if it evaluates to \code{TRUE... ! Undefined control sequence. l.3537 ...pression, which if it evaluates to \code {TRUE} the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3539 \item[\code{skipCalls}] how many previous calls to skip when reportin... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3541 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3542 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3544 \begin{Details} \relax ! Undefined control sequence. l.3545 A call to \code {browser} can be included in the body of a function. ! Undefined control sequence. l.3547 ...t expression and allows access to the \R {} interpreter. ! Undefined control sequence. l.3549 The purpose of the \code {text} and \code{condition} arguments are to ! Undefined control sequence. l.3549 The purpose of the \code{text} and \code {condition} arguments are to ! Undefined control sequence. l.3553 ...values can be retrieved by calling \code {\LinkA{browserText}{brows... ! Undefined control sequence. l.3553 ...can be retrieved by calling \code{\LinkA {browserText}{browserText}} ! Undefined control sequence. l.3554 and \code {\LinkA{browserCondition}{browserCondition}}. ! Undefined control sequence. l.3554 and \code{\LinkA {browserCondition}{browserCondition}}. ! Undefined control sequence. l.3556 The purpose of the \code {expr} argument is to allow for the illusion ! Undefined control sequence. l.3559 to the evaluator described below if \code {expr} evaluates to \code{TR... ! Undefined control sequence. l.3559 ... below if \code{expr} evaluates to \code {TRUE}. ! Undefined control sequence. l.3560 ...ing to be more efficient to use an \code {if} ! Undefined control sequence. l.3564 The \code {skipCalls} argument should be used when the \code{browser()} ! Undefined control sequence. l.3564 ...} argument should be used when the \code {browser()} ! Undefined control sequence. l.3568 ...prompt the user can enter commands or \R {} expressions, ! Undefined control sequence. \code {c} l.3573 \item[\code{c}] exit the browser ! Undefined control sequence. \code {cont} l.3575 \item[\code{cont}] synonym for \code{c}. ! Undefined control sequence. l.3575 \item[\code{cont}] synonym for \code {c}. ! Undefined control sequence. \code {f} l.3576 \item[\code{f}] finish execution of the current loop or function [36] ! Undefined control sequence. \code {help} l.3577 \item[\code{help}] print this list of commands ! Undefined control sequence. \code {n} l.3578 \item[\code{n}] evaluate the next statement, stepping over ! Undefined control sequence. l.3580 \code {browser} calls, \code{n} is equivalent to \code{c}. ! Undefined control sequence. l.3580 \code{browser} calls, \code {n} is equivalent to \code{c}. ! Undefined control sequence. l.3580 ...} calls, \code{n} is equivalent to \code {c}. ! Undefined control sequence. \code {s} l.3581 \item[\code{s}] evaluate the next statement, stepping into ! Undefined control sequence. l.3583 \code {s} equivalent to \code{c}. ! Undefined control sequence. l.3583 \code{s} equivalent to \code {c}. ! Undefined control sequence. \code {where} l.3584 \item[\code{where}] print a stack trace of all active function calls. ! Undefined control sequence. \code {r} l.3585 \item[\code{r}] invoke a \code{"resume"} restart if one is ! Undefined control sequence. l.3585 \item[\code{r}] invoke a \code {"resume"} restart if one is ! Undefined control sequence. l.3586 available; interpreted as an \R {} expression otherwise. Typically ! Undefined control sequence. l.3587 \code {"resume"} restarts are established for continuing from user ! Undefined control sequence. \code {Q} l.3589 \item[\code{Q}] exit the browser and the current evaluation and ! Undefined control sequence. l.3595 ...ling of empty lines depends on the \code {"browserNLdisabled"} ! Undefined control sequence. l.3596 \LinkA {option}{options}; if it is \code{TRUE}, empty lines are ignored. ! Undefined control sequence. l.3596 \LinkA{option}{options}; if it is \code {TRUE}, empty lines are ignored. ! Undefined control sequence. l.3597 If not, an empty line is the same as \code {n} (or \code{s}, if it was... ! Undefined control sequence. l.3597 ...y line is the same as \code{n} (or \code {s}, if it was used ! Undefined control sequence. l.3601 \R {} expression to be evaluated in the calling environment: in ! Undefined control sequence. l.3603 and \code {ls()} lists the objects in the calling frame. (If you want ! Undefined control sequence. l.3604 ...k at an object with a name such as \code {n}, print it ! Undefined control sequence. l.3608 setting \code {\LinkA{options}{options}(deparse.max.lines)}. ! Undefined control sequence. l.3608 setting \code{\LinkA {options}{options}(deparse.max.lines)}. ! Undefined control sequence. l.3610 The browser prompt is of the form \code {Browse[\var{n}]>}: here ! Undefined control sequence. l.3610 ... prompt is of the form \code{Browse[\var {n}]>}: here ! Undefined control sequence. l.3611 \code {var\{n\}} indicates the `browser level'. The browser can ! Undefined control sequence. l.3612 ...d when browsing (and often is when \code {\LinkA{debug}{debug}} is in ! Undefined control sequence. l.3612 ...browsing (and often is when \code{\LinkA {debug}{debug}} is in ! Undefined control sequence. l.3615 is usually \code {2} for the outer level of browsing and \code{1} when ! Undefined control sequence. l.3615 ...or the outer level of browsing and \code {1} when ! Undefined control sequence. l.3616 examining dumps in \code {\LinkA{debugger}{debugger}}.) ! Undefined control sequence. l.3616 examining dumps in \code{\LinkA {debugger}{debugger}}.) ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3620 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3622 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3630 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3632 \begin{SeeAlso} \relax ! Undefined control sequence. l.3633 \code {\LinkA{debug}{debug}}, and ! Undefined control sequence. l.3633 \code{\LinkA {debug}{debug}}, and ! Undefined control sequence. l.3634 \code {\LinkA{traceback}{traceback}} for the stack on error. ! Undefined control sequence. l.3634 \code{\LinkA {traceback}{traceback}} for the stack on error. ! Undefined control sequence. l.3635 \code {\LinkA{browserText}{browserText}} for how to retrieve the text ... ! Undefined control sequence. l.3635 \code{\LinkA {browserText}{browserText}} for how to retrieve the text ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3636 \end{SeeAlso} ! Undefined control sequence. l.3637 \HeaderA {browserText}{Functions to Retrieve Values Supplied by Calls ... ! Undefined control sequence. l.3638 \aliasA {browserCondition}{browserText}{browserCondition} ! Undefined control sequence. l.3639 \aliasA {browserSetDebug}{browserText}{browserSetDebug} ! Undefined control sequence. l.3640 \keyword {debugging}{browserText} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3642 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3646 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3648 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3654 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3656 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3657 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3658 \item[\code{n}] The number of contexts to skip over, it must be non-n... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3659 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3660 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3662 \begin{Details} \relax ! Undefined control sequence. l.3663 Each call to \code {browser} can supply either a text string or a cond... ! Undefined control sequence. l.3664 The functions \code {browserText} and \code{browserCondition} provide ... ! Undefined control sequence. l.3664 The functions \code{browserText} and \code {browserCondition} provide ... [37]) (Acknowledgements) ! Undefined control sequence. l.3670 \code {browserSetDebug} provides a mechanism for initiating the browse... ! Undefined control sequence. l.3671 one of the calling functions. See \code {\LinkA{sys.frame}{sys.frame}... ! Undefined control sequence. l.3671 ...the calling functions. See \code{\LinkA {sys.frame}{sys.frame}} fo... ! Undefined control sequence. l.3672 ...ssion of the calling stack. To use \code {browserSetDebug} ! Undefined control sequence. l.3674 stack and call \code {browserSetDebug} with \code{n} set to that value. ! Undefined control sequence. l.3674 ...d call \code{browserSetDebug} with \code {n} set to that value. ! Undefined control sequence. l.3675 Then, by typing \code {c} at the browser prompt you will cause evaluation ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3680 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3682 \begin{Value} ! Undefined control sequence. l.3683 \code {browserText} returns the text, while \code{browserCondition} ! Undefined control sequence. l.3683 ...owserText} returns the text, while \code {browserCondition} ! Undefined control sequence. l.3686 \code {browserSetDebug} returns NULL, invisibly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3687 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3689 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3692 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3694 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3696 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3698 \begin{SeeAlso} \relax ! Undefined control sequence. l.3699 \code {\LinkA{browser}{browser}} ! Undefined control sequence. l.3699 \code{\LinkA {browser}{browser}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Chapter 1 [1] l.3700 \end{SeeAlso} ! Undefined control sequence. l.3701 \HeaderA {builtins}{Returns the Names of All Built-in Objects}{builtins} ! Undefined control sequence. l.3702 \keyword {utilities}{builtins} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3704 \begin{Description} \relax ! Undefined control sequence. l.3706 directly from the symbol table of the \R {} interpreter. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3707 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3709 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3713 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3715 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3716 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3717 \item[\code{internal}] a logical indicating whether only `internal' ! Undefined control sequence. l.3718 functions (which can be called via \code {\LinkA{.Internal}{.Internal}... ! Undefined control sequence. l.3718 ...ns (which can be called via \code{\LinkA {.Internal}{.Internal}}) s... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3720 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3721 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3723 \begin{Details} \relax ! Undefined control sequence. l.3724 \code {builtins()} returns an unsorted list of the objects in the ! Undefined control sequence. l.3728 to use \code {ls(baseenv(), all = TRUE)}. ! Undefined control sequence. l.3730 \c Cross reference values unknown; you must run TeX again.ode {builtins(TRUE)} returns an unsorted list of the names of internal ! Undefined control sequence. l.3732 \code {.Internal(\var{foo}(args ...))} for \var{foo} in the list. ! Undefined control sequence. l.3732 \code{.Internal(\var {foo}(args ...))} for \var{foo} in the list. ! Undefined control sequence. l.3732 ....Internal(\var{foo}(args ...))} for \var {foo} in the list. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3733 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3735 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3737 \end{Value} ! Undefined control sequence. l.3738 \HeaderA {by}{Apply a Function to a Data Frame Split by Factors}{by} ! Undefined control sequence. l.3739 \methaliasA {by.data.frame}{by}{by.data.frame} ! Undefined control sequence. l.3740 \methaliasA {by.default}{by}{by.default} ! Undefined control sequence. l.3741 \aliasA {print.by}{by}{print.by} ! Undefined control sequence. l.3742 \keyword {iteration}{by} ! Undefined control sequence. l.3743 \keyword {category}{by} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3745 \begin{Description} \relax ! Undefined control sequence. l.3746 Function \code {by} is an object-oriented wrapper for ! Undefined control sequence. l.3747 \code {\LinkA{tapply}{tapply}} applied to data frames. ! Undefined control sequence. l.3747 \code{\LinkA {tapply}{tapply}} applied to data frames. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3748 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3750 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3754 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3756 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3757 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3758 \item[\code{data}] an \R{} object, normally a data frame, possibly a ... ! Undefined control sequence. l.3758 \item[\code{data}] an \R {} object, normally a data frame, possibly a ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3759 \item[\code{INDICES}] a factor or a list of factors, each of length ! Undefined control sequence. l.3760 \code {nrow(data)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3761 \item[\code{FUN}] a function to be applied to (usually data-frame) su... ! Undefined control sequence. l.3762 \code {data}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3763 \item[\code{...}] further arguments to \code{FUN}. ! Undefined control sequence. l.3763 ...m[\code{...}] further arguments to \code {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3764 \item[\code{simplify}] logical: see \code{\LinkA{tapply}{tapply}}. ! Undefined control sequence. l.3764 \item[\code{simplify}] logical: see \code {\LinkA{tapply}{tapply}}. ! Undefined control sequence. l.3764 ...ode{simplify}] logical: see \code{\LinkA {tapply}{tapply}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3765 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3766 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3768 \begin{Details} \relax ! Undefined control sequence. l.3771 \code {FUN} is applied to each subset in turn. ! Undefined control sequence. l.3775 ... also coerced to a data frame, but \code {FUN} is applied ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3777 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [2 l.3779 \begin{Value} ! Undefined control sequence. l.3780 An object of class \code {"by"}, giving the results for each subset. ! Undefined control sequence. l.3781 This is always a list if \code {simplify} is false, otherwise a list or ! Undefined control sequence. l.3782 array (see \code {\LinkA{tapply}{tapply}}). ! Undefined control sequence. l.3782 array (see \code{\LinkA {tapply}{tapply}}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3783 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3785 \begin{SeeAlso} \relax ! Undefined control sequence. l.3786 \code {\LinkA{tapply}{tapply}}, \code{\LinkA{simplify2array}{simplify2... ! Undefined control sequence. l.3786 \code{\LinkA {tapply}{tapply}}, \code{\LinkA{simplify2array}{simplify2... ! Undefined control sequence. l.3786 \code{\LinkA{tapply}{tapply}}, \code {\LinkA{simplify2array}{simplify2... ! Undefined control sequence. l.3786 \code{\LinkA{tapply}{tapply}}, \code{\LinkA {simplify2array}{simplify2... ! Undefined control sequence. l.3787 \code {\LinkA{ave}{ave}} also applies a function block-wise. ! Undefined control sequence. l.3787 \code{\LinkA {ave}{ave}} also applies a function block-wise. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3788 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3790 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3791 \begin{ExampleCode} [38]] ! You can't use `macro parameter character #' in vertical mode. l.3798 # # now suppose we want to extract the coefficients by group ! You can't use `macro parameter character #' in vertical mode. l.3798 ## now suppose we want to extract the coefficients by group ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3803 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3804 \end{Examples} ! Undefined control sequence. l.3805 \HeaderA {c}{Combine Values into a Vector or List}{c} ! Undefined control sequence. l.3806 \methaliasA {c.default}{c}{c.default} ! Undefined control sequence. l.3807 \keyword {manip}{c} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3809 \begin{Description} \relax Underfull \hbox (badness 1867) in paragraph at lines 3798--3811 []\OT1/cmr/m/n/10 now sup-pose we want to ex-tract the co-ef-fi-cients by group tmp <- Underfull \hbox (badness 1308) in paragraph at lines 3798--3811 \OT1/cmr/m/n/10 with(warpbreaks, by(warpbreaks, ten-sion, func-tion(x) lm(break s wool, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3815 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3817 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3825 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3827 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3828 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3829 \item[\code{...}] objects to be concatenated. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3830 \item[\code{recursive}] logical. If \code{recursive = TRUE}, the fun... ! Undefined control sequence. l.3830 \item[\code{recursive}] logical. If \code {recursive = TRUE}, the fun... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3833 \item[\code{use.names}] logical indicating if \code{\LinkA{names}{nam... ! Undefined control sequence. l.3833 ...{use.names}] logical indicating if \code {\LinkA{names}{names}} sho... ! Undefined control sequence. l.3833 ...mes}] logical indicating if \code{\LinkA {names}{names}} should be ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3835 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3836 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3838 \begin{Details} \relax ! Undefined control sequence. l.3843 which cannot be unlisted even if \code {recursive = TRUE}. ! Undefined control sequence. l.3846 Note that \code {\LinkA{factor}{factor}}s are treated only via their ! Undefined control sequence. l.3846 Note that \code{\LinkA {factor}{factor}}s are treated only via their ! Undefined control sequence. l.3847 internal \code {\LinkA{integer}{integer}} codes; one proposal has been... ! Undefined control sequence. l.3847 internal \code{\LinkA {integer}{integer}} codes; one proposal has been... ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3848 \begin{alltt} c.factor <- function(..., recursive=TRUE) unlist(list... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3848 ...st(...), recursive=recursive)\end{alltt} ! Undefined control sequence. l.3850 if factor concatenation by \code {c()} should give a \code{\LinkA{fact... ! Undefined control sequence. l.3850 ...nation by \code{c()} should give a \code {\LinkA{factor}{factor}}. ! Undefined control sequence. l.3850 ...by \code{c()} should give a \code{\LinkA {factor}{factor}}. ! Undefined control sequence. l.3852 \code {c} is sometimes used for its side effect of removing attributes ! Undefined control sequence. l.3854 \code {as.vector} is a more intuitive way to do this, but also drops ! Undefined control sequence. l.3858 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3859 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3861 \begin{Value} ! Undefined control sequence. l.3862 \code {NULL} or an expression or a vector of an appropriate mode. ! Undefined control sequence. l.3863 (With no arguments the value is \code {NULL}.) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3864 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3866 \begin{Section} {S4 methods} ! Undefined control sequence. l.3868 \code {(x, ...)}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3869 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3871 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3875 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3877 \begin{SeeAlso} \relax ! Undefined control sequence. l.3878 \code {\LinkA{unlist}{unlist}} and \code{\LinkA{as.vector}{as.vector}}... ! Undefined control sequence. l.3878 \code{\LinkA {unlist}{unlist}} and \code{\LinkA{as.vector}{as.vector}}... ! Undefined control sequence. l.3878 \code{\LinkA{unlist}{unlist}} and \code {\LinkA{as.vector}{as.vector}}... ! Undefined control sequence. l.3878 ...\LinkA{unlist}{unlist}} and \code{\LinkA {as.vector}{as.vector}} to... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3880 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3882 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3883 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.3887 # # uses with a single argument to drop attributes ! You can't use `macro parameter character #' in vertical mode. l.3887 ## uses with a single argument to drop attributes ! You can't use `macro parameter character #' in horizontal mode. l.3891 c(x) # has names ! You can't use `macro parameter character #' in horizontal mode. l.3892 as.vector(x) # no names ! You can't use `macro parameter character #' in vertical mode. l.3898 # # append to a list: ! You can't use `macro parameter character #' in vertical mode. l.3898 ## append to a list: ! You can't use `macro parameter character #' in horizontal mode. l.3900 # # do *not* use ! You can't use `macro parameter character #' in horizontal mode. l.3900 ## do *not* use ! You can't use `macro parameter character #' in horizontal mode. l.3901 c(ll, d = 1:3) # which is == c(ll, as.list(c(d = 1:3)) ! You can't use `macro parameter character #' in horizontal mode. l.3902 # # but rather ! You can't use `macro parameter character #' in horizontal mode. l.3902 ## but rather ! You can't use `macro parameter character #' in horizontal mode. l.3903 c(ll, d = list(1:3)) # c() combining two lists ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3909 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3910 \end{Examples} ! Undefined control sequence. l.3911 \HeaderA {call}{Function Calls}{call} ! Undefined control sequence. l.3912 \aliasA {as.call}{call}{as.call} ! Undefined control sequence. l.3913 \aliasA {is.call}{call}{is.call} ! Undefined control sequence. l.3914 \keyword {programming}{call} ! Undefined control sequence. l.3915 \keyword {attribute}{call} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3917 \begin{Description} \relax ! Undefined control sequence. l.3918 Create or test for objects of mode \code {"call"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3919 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3921 \begin{Usage} [39 Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3927 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3929 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3930 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3931 \item[\code{name}] a non-empty character string naming the function t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3932 \item[\code{...}] arguments to be part of the call. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3933 \item[\code{x}] an arbitrary \R{} object. ! Undefined control sequence. l.3933 \item[\code{x}] an arbitrary \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3934 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3935 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3937 \begin{Details} \relax ! Undefined control sequence. l.3938 \code {call} returns an unevaluated function call, that is, an ! Undefined control sequence. l.3940 the given arguments (\code {name} must be a quoted string which gives ! Undefined control sequence. l.3942 unevaluated, the arguments \code {...} are evaluated. ! Undefined control sequence. l.3944 \code {call} is a primitive, so the first argument is ! Undefined control sequence. l.3945 taken as \code {name} and the remaining arguments as arguments for the ! Undefined control sequence. l.3947 partially match \code {name}. ! Undefined control sequence. l.3949 \code {is.call} is used to determine whether \code{x} is a call (i.e., ! Undefined control sequence. l.3949 ...call} is used to determine whether \code {x} is a call (i.e., ! Undefined control sequence. l.3950 of mode \code {"call"}). ! Undefined control sequence. l.3952 Objects of mode ]\code {"list"} can be coerced to mode \code{"call"}. ! Undefined control sequence. l.3952 ...ode{"list"} can be coerced to mode \code {"call"}. ! Undefined control sequence. l.3957 All three are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3958 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3960 \begin{Section} {Warning} ! Undefined control sequence. l.3961 \code {call} should not be used to attempt to evade restrictions on the ! Undefined control sequence. l.3962 use of \code {.Internal} and other non-API calls. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3963 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3965 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3969 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3971 \begin{SeeAlso} \relax ! Undefined control sequence. l.3972 \code {\LinkA{do.call}{do.call}} for calling a function by name and ar... ! Undefined control sequence. l.3972 \code{\LinkA {do.call}{do.call}} for calling a function by name and ar... ! Undefined control sequence. l.3974 \code {\LinkA{Recall}{Recall}} for recursive calling of functions; ! Undefined control sequence. l.3974 \code{\LinkA {Recall}{Recall}} for recursive calling of functions; ! Undefined control sequence. l.3976 \code {\LinkA{is.language}{is.language}}, ! Undefined control sequence. l.3976 \code{\LinkA {is.language}{is.language}}, ! Undefined control sequence. l.3977 \code {\LinkA{expression}{expression}}, ! Undefined control sequence. l.3977 \code{\LinkA {expression}{expression}}, ! Undefined control sequence. l.3978 \code {\LinkA{function}{function}}. ! Undefined control sequence. l.3978 \code{\LinkA {function}{function}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3979 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3981 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3982 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3983 is.call(call) # -> FALSE: Functions are NOT calls ! You can't use `macro parameter character #' in vertical mode. l.3985 # # set up a function call to round with argument 10.5 ! You can't use `macro parameter character #' in vertical mode. l.3985 ## set up a function call to round with argument 10.5 ! You can't use `macro parameter character #' in horizontal mode. l.3987 is.call(cl) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.3989 # # such a call can also be evaluated. ! You can't use `macro parameter character #' in horizontal mode. l.3989 ## such a call can also be evaluated. ! You can't use `macro parameter character #' in horizontal mode. l.3990 eval(cl) # [1] 10 ! You can't use `macro parameter character #' in horizontal mode. l.3993 call("round", A) # round(10.5) ! You can't use `macro parameter character #' in horizontal mode. l.3994 call("round", quote(A)) # round(A) ! You can't use `macro parameter character #' in horizontal mode. l.3996 call(f, quote(A)) # round(A) ! You can't use `macro parameter character #' in horizontal mode. l.3997 # # if we want to supply a function we need to use as.call or similar ! You can't use `macro parameter character #' in horizontal mode. l.3997 ## if we want to supply a function we need to use as.call or similar ! You can't use `macro parameter character #' in horizontal mode. l.3999 # # Not run: call(f, quote(A)) # error: first arg must be character ! You can't use `macro parameter character #' in horizontal mode. l.3999 ## Not run: call(f, quote(A)) # error: first arg must be character ! You can't use `macro parameter character #' in horizontal mode. l.3999 ## Not run: call(f, quote(A)) # error: first arg must be character ! You can't use `macro parameter character #' in horizontal mode. l.4002 # # alternatively but less transparently ! You can't use `macro parameter character #' in horizontal mode. l.4002 ## alternatively but less transparently ! You can't use `macro parameter character #' in horizontal mode. l.4007 # # see also the examples in the help for do.call ! You can't use `macro parameter character #' in horizontal mode. l.4007 ## see also the examples in the help for do.call ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4008 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4009 \end{Examples} ! Undefined control sequence. l.4010 \HeaderA {callCC}{Call With Current Continuation}{callCC} ! Undefined control sequence. l.4011 \keyword {programming}{callCC} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4013 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4015 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4017 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4021 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4023 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4024 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4025 \item[\code{fun}] function of one argument, the exit procedure. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4026 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4027 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4029 \begin{Details} \relax ! Undefined control sequence. l.4030 \code {callCC} provides a non-local exit mechanism that can be useful ! Undefined control sequence. l.4031 ...rly termination of a computation. \code {callCC} calls ! Undefined control sequence. l.4032 \code {fun} with one argument, an \emph{exit function}. The exit ! Undefined control sequence. l.4034 body of \code {fun} calls the exit function then the call to ! Undefined control sequence. l.4035 \code {callCC} immediately returns, with the value supplied to the exit ! Undefined control sequence. l.4036 function as the value returned by \code {callCC}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4037 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4039 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [4 l.4041 \end{Author} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4043 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4044 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4045 # The following all return the value 1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4050 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4051 \end{Examples} ! Undefined control sequence. l.4052 \HeaderA {CallExternal}{Modern Interfaces to C/C++ code}{CallExternal} ! Undefined control sequence. l.4053 \aliasA {.Call}{CallExternal}{.Call} ! Undefined control sequence. l.4054 \aliasA {.External}{CallExternal}{.External} ! Undefined control sequence. l.4055 \keyword {programming}{CallExternal} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4057 \begin{Description} \relax ! Undefined control sequence. l.4058 Functions to pass \R {} objects to compiled C/C++ code that has been ! Undefined control sequence. l.4059 loaded into \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4060 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4062 \begin{Usage} [40]> [34]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4067 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4069 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4070 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4071 \item[\code{.NAME}] a character string giving the name of a C function, ! Undefined control sequence. l.4072 or an object of class \code {"\LinkA{NativeSymbolInfo}{NativeSymbolInf... ! Undefined control sequence. l.4072 or an object of class \code{"\LinkA {NativeSymbolInfo}{NativeSymbolInf... ! Undefined control sequence. l.4073 \code {"\LinkA{RegisteredNativeSymbol}{RegisteredNativeSymbol}"} or ! Undefined control sequence. l.4073 \code{"\LinkA {RegisteredNativeSymbol}{RegisteredNativeSymbol}"} or ! Undefined control sequence. l.4074 \code {"\LinkA{NativeSymbol}{NativeSymbol}"} referring to such a name. ! Undefined control sequence. l.4074 \code{"\LinkA {NativeSymbol}{NativeSymbol}"} referring to such a name. Underfull \hbox (badness 1484) in paragraph at lines 4071--4075 []\OT1/cmr/m/n/10 a char-ac-ter string giv-ing the name of a C func-tion, or an ob-ject of Underfull \hbox (badness 1910) in paragraph at lines 4071--4075 \OT1/cmr/m/n/10 class "Na-tiveSym-bol-In-foNa-tiveSym-bol-Info", "Reg-is-tered- Na-tiveSym-bol-Reg-is- ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4076 \item[\code{...}] arguments to be passed to the compiled code. Up to ... ! Undefined control sequence. l.4077 \code {.Call}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4079 \item[\code{PACKAGE}] if supplied, confine the search for a character... ! Undefined control sequence. l.4080 \code {.NAME} to the DLL given by this argument (plus the ! Undefined control sequence. l.4081 conventional extension, \file {.so}, \file{.dll}, \dots). ! Undefined control sequence. l.4081 conventional extension, \file{.so}, \file {.dll}, \dots). ! Undefined control sequence. l.4083 This argument follows \code {...} and so its name cannot be abbreviated. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4088 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaT for immediate help. ... l.4089 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4091 \begin{Details} \relax ! Undefined control sequence. l.4093 internal \R {} objects, passing the arguments to the code as a sequence ! Undefined control sequence. l.4094 of \R {} objects. They assume C calling conventions, so can usually ! Undefined control sequence. l.4099 the `Writing \R {} Extensions' manual. They differ in the way the ! Undefined control sequence. l.4100 arguments are passed to the C code: \code {.External} allows for a ! Undefined control sequence. l.4103 These functions are \LinkA {primitive}{primitive}, and \code{.NAME} is... ! Undefined control sequence. l.4103 ... \LinkA{primitive}{primitive}, and \code {.NAME} is always ! Undefined control sequence. l.4105 ...g names in the arguments passed to \code {...} ! Undefined control sequence. l.4106 that match or partially match \code {.NAME}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4107 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4109 \begin{Value} ! Undefined control sequence. l.4110 An \R {} object constructed in the compiled code. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4111 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4113 \begin{Section} {Header files for external code} ! Undefined control sequence. l.4114 ...e functions will need to use internal \R {} ! Undefined control sequence. l.4115 structures defined in \file {Rinternals.h} and/or the macros in ! Undefined control sequence. l.4116 \file {Rdefines.h}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4117 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4119 \begin{Note} \relax ! Undefined control sequence. l.4121 \code {PACKAGE} (to confine the search to a single DLL) or pass ! Undefined control sequence. l.4122 \code {.NAME} as one of the native symbol objects. Searching for ! Undefined control sequence. l.4125 You may see \code {PACKAGE = "base"} for symbols linked into \R{}. Do ! Undefined control sequence. l.4125 ...AGE = "base"} for symbols linked into \R {}. Do ! Undefined control sequence. l.4129 \code {PACKAGE = ""} used to be accepted (but was undocumented): it is ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4131 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4133 \begin{References} \relax ! Undefined control sequence. l.4136 Springer. (\code {.Call}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4137 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4139 \begin{SeeAlso} \relax ! Undefined control sequence. l.4140 \code {\LinkA{dyn.load}{dyn.load}}, \code{\LinkA{.C}{.C}}, \code{\Link... ! Undefined control sequence. l.4140 \code{\LinkA {dyn.load}{dyn.load}}, \code{\LinkA{.C}{.C}}, \code{\Link... ! Undefined control sequence. l.4140 \code{\LinkA{dyn.load}{dyn.load}}, \code {\LinkA{.C}{.C}}, \code{\Link... ! Undefined control sequence. l.4140 ...LinkA{dyn.load}{dyn.load}}, \code{\LinkA {.C}{.C}}, \code{\LinkA{.F... ! Undefined control sequence. l.4140 ...dyn.load}}, \code{\LinkA{.C}{.C}}, \code {\LinkA{.Fortran}{.Fortran}}. ! Undefined control sequence. l.4140 ...d}}, \code{\LinkA{.C}{.C}}, \code{\LinkA {.Fortran}{.Fortran}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4143 \end{SeeAlso} ! Undefined control sequence. l.4144 \HeaderA {capabilities}{Report Capabilities of this Build of R}{capabi... ! Undefined control sequence. l.4145 \keyword {utilities}{capabilities} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4147 \begin{Description} \relax ! Undefined control sequence. l.4149 build of \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4150 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4152 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4156 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4158 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4159 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4160 \item[\code{what}] character vector or \code{NULL}, specifying ! Undefined control sequence. l.4160 ...m[\code{what}] character vector or \code {NULL}, specifying ! Undefined control sequence. l.4161 required components. \code {NULL} implies that all are required. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4162 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4163 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4165 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4167 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4168 \item[\code{jpeg}] is the \code{\LinkA{jpeg}{jpeg}} function operatio... ! Undefined control sequence. l.4168 \item[\code{jpeg}] is the \code {\LinkA{jpeg}{jpeg}} function operatio... ! Undefined control sequence. l.4168 \item[\code{jpeg}] is the \code{\LinkA {jpeg}{jpeg}} function operatio... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4169 \item[\code{png}] is the \code{\LinkA{png}{png}} function operational? ! Undefined control sequence. l.4169 \item[\code{png}] is the \code {\LinkA{png}{png}} function operational? ! Undefined control sequence. l.4169 \item[\code{png}] is the \code{\LinkA {png}{png}} function operational? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4170 \item[\code{tiff}] is the \code{\LinkA{tiff}{tiff}} function operatio... ! Undefined control sequence. l.4170 \item[\code{tiff}] is the \code {\LinkA{tiff}{tiff}} function operatio... ! Undefined control sequence. l.4170 \item[\code{tiff}] is the \code{\LinkA {tiff}{tiff}} function operatio... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4171 \item[\code{tcltk}] is the \pkg{tcltk} package operational? ! Undefined control sequence. l.4171 \item[\code{tcltk}] is the \pkg {tcltk} package operational? ! Undefined control sequence. l.4173 that \code {"X11"} is also available. [41]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4175 \item[\code{X11}] are the \code{\LinkA{X11}{X11}} graphics device and... ! Undefined control sequence. l.4175 \item[\code{X11}] are the \code {\LinkA{X11}{X11}} graphics device and... ! Undefined control sequence. l.4175 \item[\code{X11}] are the \code{\LinkA {X11}{X11}} graphics device and... ! Undefined control sequence. l.4178 contacted unless a \code {X11} device has already been used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4180 \item[\code{aqua}] is the \code{\LinkA{quartz}{quartz}} function oper... ! Undefined control sequence. l.4180 \item[\code{aqua}] is the \code {\LinkA{quartz}{quartz}} function oper... ! Undefined control sequence. l.4180 \item[\code{aqua}] is the \code{\LinkA {quartz}{quartz}} function oper... ! Undefined control sequence. l.4181 ...on some macOS builds, including \acronym {CRAN} binary ! Undefined control sequence. l.4182 distributions of \R {}. ! Undefined control sequence. l.4184 Note that this is distinct from \code {.Platform\$GUI == "AQUA"}, ! Undefined control sequence. l.4185 which is true only when using the Mac \code {R.app} GUI console. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4186 \end{ldescription} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4187 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4188 \item[\code{http/ftp}] does the internal method for \code{\LinkA{url}... ! Undefined control sequence. l.4188 ...ftp}] does the internal method for \code {\LinkA{url}{url}} and ! Undefined control sequence. l.4188 ...oes the internal method for \code{\LinkA {url}{url}} and ! Undefined control sequence. l.4189 \code {\LinkA{download.file}{download.file}} support \samp{http://} an... ! Undefined control sequence. l.4189 \code{\LinkA {download.file}{download.file}} support \samp{http://} an... ! Undefined control sequence. l.4189 ...load.file}{download.file}} support \samp {http://} and \samp{ftp://} ! Undefined control sequence. l.4189 ....file}} support \samp{http://} and \samp {ftp://} ! Undefined control sequence. l.4190 URLs? Always \code {TRUE} as from \R{} 3.3.0. ! Undefined control sequence. l.4190 URLs? Always \code{TRUE} as from \R {} 3. Underfull \hbox (badness 10000) in paragraph at lines 494--497 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [63.0. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4191 \item[\code{sockets}] are \code{\LinkA{make.socket}{make.socket}} an... ! Undefined control sequence. l.4191 \item[\code{sockets}] are \code {\LinkA{make.socket}{make.socket}} an... ! Undefined control sequence. l.4191 \item[\code{sockets}] are \code{\LinkA {make.socket}{make.socket}} an... ! Undefined control sequence. l.4192 available? Always \code {TRUE} as from \R{} 3.3.0. ! Undefined control sequence. l.4192 available? Always \code{TRUE} as from \R {} 3.3.0. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4193 \item[\code{libxml}] is there support for integrating \code{libxml} with ! Undefined control sequence. l.4193 ...] is there support for integrating \code {libxml} with ! Undefined control sequence. l.4194 the \R {} event loop? Always \code{TRUE} as from \R{} 3.3.0. ! Undefined control sequence. l.4194 the \R{} event loop? Always \code {TRUE} as from \R{} 3.3.0. ! Undefined control sequence. l.4194 ...ent loop? Always \code{TRUE} as from \R {} 3.3.0. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4195 \item[\code{fifo}] are FIFO \LinkA{connections}{connections} supported? ! Undefined control sequence. l.4195 \item[\code{fifo}] are FIFO \LinkA {connections}{connections} supported? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4196 \item[\code{cledit}] is command-line editing available in the current... ! Undefined control sequence. l.4196 ...line editing available in the current \R {} ! Undefined control sequence. l.4198 ... for the command-line interface if \code {readline} ! Undefined control sequence. l.4199 support has been compiled in and \option {--no-readline} was ! Undefined control sequence. l.4200 \emph{not} used when \R {} was invoked. (If \option{--interactive} ! Undefined control sequence. l.4200 ...used when \R{} was invoked. (If \option {--interactive} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4203 \item[\code{iconv}] is internationalization conversion via ! Undefined control sequence. l.4204 \code {\LinkA{iconv}{iconv}} supported? Always true in current \R{}. ! Undefined control sequence. l.4204 \code{\LinkA {iconv}{iconv}} supported? Always true in current \R{}. ! Undefined control sequence. l.4204 ...}} supported? Always true in current \R {}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4205 \item[\code{NLS}] is there Natural Language Support (for message tran... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4206 \item[\code{profmem}] is there support for memory profiling? See ! Undefined control sequence. l.4207 \code {\LinkA{tracemem}{tracemem}}. ! Undefined control sequence. l.4207 \code{\LinkA {tracemem}{tracemem}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4208 \item[\code{cairo}] is there support for the \code{\LinkA{svg}{svg}}, ! Undefined control sequence. l.4208 ...e{cairo}] is there support for the \code {\LinkA{svg}{svg}}, ! Undefined control sequence. l.4208 ...}] is there support for the \code{\LinkA {svg}{svg}}, ! Undefined control sequence. l.4209 \code {\LinkA{cairo\_pdf}{cairo.Rul.pdf}} and \code{\LinkA{cairo\_ps}{... ! Undefined control sequence. l.4209 \code{\LinkA {cairo\_pdf}{cairo.Rul.pdf}} and \code{\LinkA{cairo\_ps}{... ! Undefined control sequence. l.4209 ...kA{cairo\_pdf}{cairo.Rul.pdf}} and \code {\LinkA{cairo\_ps}{cairo.R... ! Undefined control sequence. l.4209 ...o\_pdf}{cairo.Rul.pdf}} and \code{\LinkA {cairo\_ps}{cairo.Rul.ps}}... ! Undefined control sequence. l.4210 for \code {type = "cairo"} in the ! Undefined control sequence. l.4211 \code {\LinkA{X11}{X11}}, ! Undefined control sequence. l.4211 \code{\LinkA {X11}{X11}}, ! Undefined control sequence. l.4212 \code {\LinkA{bmp}{bmp}}, \code{\LinkA{jpeg}{jpeg}}, \code{\LinkA{png}... ! Undefined control sequence. l.4212 \code{\LinkA {bmp}{bmp}}, \code{\LinkA{jpeg}{jpeg}}, \code{\LinkA{png}... ! Undefined control sequence. l.4212 \code{\LinkA{bmp}{bmp}}, \code {\LinkA{jpeg}{jpeg}}, \code{\LinkA{png}... ! Undefined control sequence. l.4212 \code{\LinkA{bmp}{bmp}}, \code{\LinkA {jpeg}{jpeg}}, \code{\LinkA{png}... ! Undefined control sequence. l.4212 ...{bmp}}, \code{\LinkA{jpeg}{jpeg}}, \code {\LinkA{png}{png}}, ! Undefined control sequence. l.4212 ... \code{\LinkA{jpeg}{jpeg}}, \code{\LinkA {png}{png}}, ! Undefined control sequence. l.4213 and \code {\LinkA{tiff}{tiff}} devices? ! Undefined control sequence. l.4213 and \code{\LinkA {tiff}{tiff}} devices? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4215 \item[\code{ICU}] is ICU available for collation? See the help on ! Undefined control sequence. l.4216 \LinkA {Comparison}{Comparison} and \code{\LinkA{icuSetCollate}{icuSet... ! Undefined control sequence. l.4216 \LinkA{Comparison}{Comparison} and \code {\LinkA{icuSetCollate}{icuSet... ! Undefined control sequence. l.4216 ...Comparison}{Comparison} and \code{\LinkA {icuSetCollate}{icuSetColl... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4219 \item[\code{long.double}] does this build use a \code{C} \code{long d... ! Undefined control sequence. l.4219 ...ong.double}] does this build use a \code {C} \code{long double} ! Undefined control sequence. l.4219 ...e}] does this build use a \code{C} \code {long double} ! Undefined control sequence. l.4220 type which is longer than \code {double}? Some platforms do not ! Undefined control sequence. l.4222 configure option \option {--disable-long-double}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4229 \item[\code{libcurl}] is \code{libcurl} available in this build? Use... ! Undefined control sequence. l.4229 \item[\code{libcurl}] is \code {libcurl} available in this build? Use... ! Undefined control sequence. l.4230 function \code {\LinkA{curlGetHeaders}{curlGetHeaders}} and optionally by ! Undefined control sequence. l.4230 function \code{\LinkA {curlGetHeaders}{curlGetHeaders}} and optionally by ! Undefined control sequence. l.4231 \code {\LinkA{download.file}{download.file}} and \code{\LinkA{url}{url... ! Undefined control sequence. l.4231 \code{\LinkA {download.file}{download.file}} and \code{\LinkA{url}{url... ! Undefined control sequence. l.4231 ...download.file}{download.file}} and \code {\LinkA{url}{url}}. As f... ! Undefined control sequence. l.4231 ...d.file}{download.file}} and \code{\LinkA {url}{url}}. As from \R{} ! Undefined control sequence. l.4231 ...nd \code{\LinkA{url}{url}}. As from \R {} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4233 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4234 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4236 \begin{Section} {Note to macOS users} ! Undefined control sequence. l.4237 Capabilities \code {"jpeg"}, \code{"png"} and \code{"tiff"} refer to ! Undefined control sequence. l.4237 Capabilities \code{"jpeg"}, \code {"png"} and \code{"tiff"} refer to ! Undefined control sequence. l.4237 ...es \code{"jpeg"}, \code{"png"} and \code {"tiff"} refer to ! Undefined control sequence. l.4239 \code {capab]ilities("aqua")} is true, then these devices with ! Undefined control sequence. l.4240 \code {type = "quartz"} will be available, and out-of-the-box will be the ! Undefined control sequence. l.4241 default type. Thus for example the \code {\LinkA{tiff}{tiff}} device ... ! Undefined control sequence. l.4241 ...type. Thus for example the \code{\LinkA {tiff}{tiff}} device will be ! Undefined control sequence. l.4242 available if \code {capabilities("aqua") || capabilities("tiff")} if ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4244 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4246 \begin{SeeAlso} \relax ! Undefined control sequence. l.4247 \code {\LinkA{.Platform}{.Platform}} and \code{\LinkA{extSoftVersion}{... ! Undefined control sequence. l.4247 \code{\LinkA {.Platform}{.Platform}} and \code{\LinkA{extSoftVersion}{... ! Undefined control sequence. l.4247 ...{\LinkA{.Platform}{.Platform}} and \code {\LinkA{extSoftVersion}{ex... ! Undefined control sequence. l.4247 ...{.Platform}{.Platform}} and \code{\LinkA {extSoftVersion}{extSoftVe... ! Undefined control sequence. l.4248 ...ility capabilities \emph{external} to \R {} but ! Undefined control sequence. l.4249 used from \R {} functions. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4251 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4253 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4254 \begin{ExampleCode} [42] ! You can't use `macro parameter character #' in vertical mode. l.4260 # # See also the examples for 'connections'. ! You can't use `macro parameter character #' in vertical mode. l.4260 ## See also the examples for 'connections'. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4261 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4262 \end{Examples} ! Undefined control sequence. l.4263 \HeaderA {cat}{Concatenate and Print}{cat} ! Undefined control sequence. l.4264 \keyword {print}{cat} ! Undefined control sequence. l.4265 \keyword {file}{cat} ! Undefined control sequence. l.4266 \keyword {connection}{cat} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4268 \begin{Description} \relax ! Undefined control sequence. l.4269 ...oncatenating the representations. \code {cat} ! Undefined control sequence. l.4270 performs much less conversion than \code {\LinkA{print}{print}}. ! Undefined control sequence. l.4270 ...s much less conversion than \code{\LinkA {print}{print}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4271 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4273 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4278 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4280 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4281 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4282 \item[\code{...}] \R{} objects (see `Details' for the types of objects ! Undefined control sequence. l.4282 \item[\code{...}] \R {} objects (see `Details' for the types of objects ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4284 \item[\code{file}] A \LinkA{connection}{connection}, or a character s... ! Undefined control sequence. l.4284 \item[\code{file}] A \LinkA {connection}{connection}, or a character s... ! Undefined control sequence. l.4285 to print to. If \code {""} (the default), \code{cat} prints to the ! Undefined control sequence. l.4285 ...t to. If \code{""} (the default), \code {cat} prints to the ! Undefined control sequence. l.4287 \code {\LinkA{sink}{sink}}. ! Undefined control sequence. l.4287 \code{\LinkA {sink}{sink}}. ! Undefined control sequence. l.4288 If it is \code {"|cmd"}, the output is piped to the command given ! Undefined control sequence. l.4289 by \file {cmd}, by opening a pipe connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4291 \item[\code{sep}] a character vector of strings to append after each ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4292 \item[\code{fill}] a logical or (positive) numeric controlling how th... ! Undefined control sequence. l.4293 broken into successive lines. If \code {FALSE} (default), only newlines ! Undefined control sequence. l.4294 created explicitly by \samp {"\bsl{}n"} are printed. Otherwise, the ! Undefined control sequence. l.4294 created explicitly by \samp{"\bsl {}n"} are printed. Otherwise, the ! Undefined control sequence. l.4296 \code {width} if \code{fill} is \code{TRUE}, or the value of ! Undefined control sequence. l.4296 \code{width} if \code {fill} is \code{TRUE}, or the value of ! Undefined control sequence. l.4296 \code{width} if \code{fill} is \code {TRUE}, or the value of ! Undefined control sequence. l.4297 \code {fill} if this is numeric. Non-positive \code{fill} values are ! Undefined control sequence. l.4297 ... if this is numeric. Non-positive \code {fill} values are ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4299 \item[\code{labels}] character vector of labels for the lines printed. ! Undefined control sequence. l.4300 Ignored if \code {fill} is \code{FALSE}. ! Undefined control sequence. l.4300 Ignored if \code{fill} is \code {FALSE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4301 \item[\code{append}] logical. Only used if the argument \code{file} i... ! Undefined control sequence. l.4301 ...logical. Only used if the argument \code {file} is the ! Undefined control sequence. l.4302 name of file (and not a connection or \code {"|cmd"}). ! Undefined contro Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm Lit-er-a-ture Clas-si-fi-ca-tion Sys-tem, [][]@texttt https://www.aeawe b.org/econlit/jelCodes.php[][][]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm or `@texttt Classification/MSC[]@textrm '[] or `@texttt Classification/ MSC-2010[]@textrm '[] (the Math-e-mat-ics Sub-ject [7l sequence. l.4303 If \code {TRUE} output will be appended to ! Undefined control sequence. l.4304 \code {file}; otherwise, it will overwrite the contents of ! Undefined control sequence. l.4305 \code {file}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4306 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4307 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4309 \begin{Details} \relax ! Undefined control sequence. l.4310 \code {cat} is useful for producing output in user-defined functions. ! Undefined control sequence. l.4312 ...haracter vector, appends the given \code {sep = } ! Undefined control sequence. l.4315 ...put unless explicitly requested by \samp {"\bsl{}n"} ! Undefined control sequence. l.4315 ...less explicitly requested by \samp{"\bsl {}n"} ! Undefined control sequence. l.4316 ... generated by filling (if argument \code {fill} is \code{TRUE} or ! Undefined control sequence. l.4316 ...illing (if argument \code{fill} is \code {TRUE} or ! Undefined control sequence. l.4319 If \code {file} is a connection and open for writing it is written from ! Undefined control sequence. l.4321 duration of the call in \code {"wt"} mode and then closed again. ! Undefined control sequence. l.4323 Currently only \LinkA {atomic}{atomic} vectors and \LinkA{name}{name}s... ! Undefined control sequence. l.4323 ...LinkA{atomic}{atomic} vectors and \LinkA {name}{name}s are handled, ! Undefined control sequence. l.4324 together with \code {NULL} and other zero-length objects (which produce ! Undefined control sequence. l.4326 \code {\LinkA{print.default}{print.default}} which escapes non-printab... ! Undefined control sequence. l.4326 \code{\LinkA {print.default}{print.default}} which escapes non-printab... ! Undefined control sequence. l.4327 backslash --- use \code {\LinkA{encodeString}{encodeString}} if you wa... ! Undefined control sequence. l.4327 backslash --- use \code{\LinkA {encodeString}{encodeString}} if you wa... ! Undefined control sequence. l.4328 encoded strings using \code {cat}). Other types of \R{} object should be ! Undefined control sequence. l.4328 ...gs using \code{cat}). Other types of \R {} object should be ! Undefined control sequence. l.4329 converted (e.g., by \code {\LinkA{as.character}{as.character}} or \cod... ! Undefined control sequence. l.4329 converted (e.g., by \code{\LinkA {as.character}{as.character}} or \cod... ! Undefined control sequence. l.4329 ...kA{as.character}{as.character}} or \code {\LinkA{format}{format}}) ! Undefined control sequence. l.4329 ...haracter}{as.character}} or \code{\LinkA {format}{format}}) ! Undefined control sequence. l.4330 before being passed to \code {cat}. That includes factors, which are ! Undefined control sequence. l.4333 \code {cat} converts numeric/complex elements in the same way as ! Undefined control sequence. l.4334 \code {print} (and not in the same way as \code{\LinkA{as.character}{a... ! Undefined control sequence. l.4334 ...print} (and not in the same way as \code {\LinkA{as.character}{as.c... ! Undefined control sequence. l.4334 ...(and not in the same way as \code{\LinkA {as.character}{as.character}} ! Undefined control sequence. l.4335 ...h is used by the S equivalent), so \code {\LinkA{options}{options}} ! Undefined control sequence. l.4335 ...ed by the S equivalent), so \code{\LinkA {options}{options}} ! Undefined control sequence. l.4336 \code {"digits"} and \code{"scipen"} are relevant. However, it uses ! Undefined control sequence. l.4336 \code{"digits"} and \code {"scipen"} are relevant. However, it uses ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4339 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4341 \begin{Value} ! Undefined control sequence. l.4342 None (invisible \code {NULL}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4343 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4345 \begin{Note} \relax ! Undefined control sequence. l.4346 If any element of \code {sep} contains a newline character, it is ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4350 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4352 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4356 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4358 \begin{SeeAlso} \relax ! Undefined control sequence. l.4359 \code {\LinkA{print}{print}}, \code{\LinkA{format}{format}}, and \code... ! Undefined control sequence. l.4359 \code{\LinkA {print}{print}}, \code{\LinkA{format}{format}}, and \code... ! Undefined control sequence. l.4359 \code{\LinkA{print}{print}}, \code {\LinkA{format}{format}}, and \code... ! Undefined control sequence. l.4359 \code{\LinkA{print}{print}}, \code{\LinkA {format}{format}}, and \code... ! Undefined control sequence. l.4359 ...\code{\LinkA{format}{format}}, and \code {\LinkA{paste}{paste}} ! Undefined control sequence. l.4359 ...LinkA{format}{format}}, and \code{\LinkA {paste}{paste}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4361 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4363 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4364 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4366 # # print an informative message ! You can't use `macro parameter character #' in horizontal mode. l.4366 ## print an informative message ! Undefined control sequence. l.4367 cat("iteration = ", iter <- iter + 1, "\n ") [43]] ! You can't use `macro parameter character #' in vertical mode. l.4369 # # 'fill' and label lines: ! You can't use `macro parameter character #' in vertical mode. l.4369 ## 'fill' and label lines: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4371 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4372 \end{Examples} ! Undefined control sequence. l.4373 \HeaderA {cbind}{Combine R Objects by Rows or Columns}{cbind} ! Undefined control sequence. l.4374 \aliasA {.\_\_H\_\_.cbind}{cbind}{..Rul..Rul.H.Rul..Rul..cbind} ! Undefined control sequence. l.4375 \aliasA {.\_\_H\_\_.rbind}{cbind}{..Rul..Rul.H.Rul..Rul..rbind} ! Undefined control sequence. l.4376 \methaliasA {cbind.data.frame}{cbind}{cbind.data.frame} ! Undefined control sequence. l.4377 \aliasA {rbind}{cbind}{rbind} ! Undefined control sequence. l.4378 \methaliasA {rbind.data.frame}{cbind}{rbind.data.frame} ! Undefined control sequence. l.4379 \keyword {array}{cbind} ! Undefined control sequence. l.4380 \keyword {manip}{cbind} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4382 \begin{Description} \relax ! Undefined control sequence. l.4385 functions with methods for other \R {} classes. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4386 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4388 \begin{Usage} Underfull \hbox (badness 2970) in paragraph at lines 4369--4389 []\OT1/cmr/m/n/10 'fill' and la-bel lines: cat(paste(letters, 100* 1:26), fill = TRUE, Underfull \hbox (badness 10000) in paragraph at lines 4369--4389 \OT1/cmr/m/n/10 la-bels = paste0("", 1:10, ":")) cbind-Com-bine R Ob-jects by Underfull \hbox (badness 10000) in paragraph at lines 4369--4389 \OT1/cmr/m/n/10 Rows or Column-scbind .[][]H[][].cbindcbind..Rul..Rul.H.Rul..Ru l..cbind Overfull \hbox (24.51201pt too wide) in paragraph at lines 4369--4389 \OT1/cmr/m/n/10 .[][]H[][].rbindcbind..Rul..Rul.H.Rul..Rul..rbind cbind.data.fr amecbindcbind.data.frame Underfull \hbox (badness 10000) in paragraph at lines 4369--4389 \OT1/cmr/m/n/10 rbind-cbindrbind rbind.data.framecbindrbind.data.frame ar-ray-c bind ma- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4396 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4398 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4399 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4400 \item[\code{...}] (generalized) vectors or matrices. These can be gi... ! Undefined control sequence. l.4401 arguments. Other \R {} objects may be coerced as appropriate, or S4 ! Undefined control sequence. l.4403 `Value'. (For the \code {"data.frame"} method of \code{cbind} ! Undefined control sequence. l.4403 ... the \code{"data.frame"} method of \code {cbind} ! Undefined control sequence. l.4404 these can be further arguments to \code {\LinkA{data.frame}{data.frame... ! Undefined control sequence. l.4404 ...can be further arguments to \code{\LinkA {data.frame}{data.frame}} ... ! Undefined control sequence. l.4405 \code {stringsAsFactors}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4406 \item[\code{deparse.level}] integer controlling the construction of l... ! Undefined control sequence. l.4408 \code {deparse.level = 0} constructs no labels; the default,\\{} ! Undefined control sequence. l.4409 \code {deparse.level = 1 or 2} constructs labels from the argument ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4411 \item[\code{make.row.names}] (only for data frame method:) logical ! Undefined control sequence. l.4412 indicating if unique and valid \code {\LinkA{row.names}{row.names}} sh... ! Undefined control sequence. l.4412 indicating if unique and valid \code{\LinkA {row.names}{row.names}} sh... Underfull \hbox (badness 1917) in paragraph at lines 4411--4414 []\OT1/cmr/m/n/10 (only for data frame method:) log-i-cal in-di-cat-ing if uniq ue and valid ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4414 \item[\code{stringsAsFactors}] logical, passed to \code{\LinkA{as.dat... ! Undefined control sequence. l.4414 ...ingsAsFactors}] logical, passed to \code {\LinkA{as.data.frame}{as.... ! Undefined control sequence. l.4414 ...actors}] logical, passed to \code{\LinkA {as.data.frame}{as.data.fr... ! Undefined control sequence. l.4415 only has an effect when the \code {...} arguments contain a ! Undefined control sequence. l.4416 (non-\code {data.frame}) \code{\LinkA{character}{character}}. ! Undefined control sequence. l.4416 (non-\code{data.frame}) \code {\LinkA{character}{character}}. ! Undefined control sequence. l.4416 (non-\code{data.frame}) \code{\LinkA {character}{charac [8ter}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4417 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4418 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4420 \begin{Details} \relax ! Undefined control sequence. l.4421 The functions \code {cbind} and \code{rbind} are S3 generic, with ! Undefined control sequence. l.4421 The functions \code{cbind} and \code {rbind} are S3 generic, with ! Undefined control sequence. l.4427 S4 class, i.e., \code {\LinkA{isS4}{isS4}(.)} is true, S4 methods are ... ! Undefined control sequence. l.4427 S4 class, i.e., \code{\LinkA {isS4}{isS4}(.)} is true, S4 methods are ... ! Undefined control sequence. l.4428 also, and the hidden \code {cbind} / \code{rbind} functions ! Undefined control sequence. l.4428 also, and the hidden \code{cbind} / \code {rbind} functions ! Undefined control sequence. l.4429 from package \pkg {methods} maybe called, which in turn build on ! Undefined control sequence. l.4430 \code {\LinkA{cbind2}{cbind2}} or \code{\LinkA{rbind2}{rbind2}}, respe... ! Undefined control sequence. l.4430 \code{\LinkA {cbind2}{cbind2}} or \code{\LinkA{rbind2}{rbind2}}, respe... ! Undefined control sequence. l.4430 \code{\LinkA{cbind2}{cbind2}} or \code {\LinkA{rbind2}{rbind2}}, respe... ! Undefined control sequence. l.4430 ...{\LinkA{cbind2}{cbind2}} or \code{\LinkA {rbind2}{rbind2}}, respect... ! Undefined control sequence. l.4431 case, \code {deparse.level} is obeyed, similarly to the default method. ! Undefined control sequence. l.4434 \code {\LinkA{vector}{vector}}) or lists. Expressions are not allowed. ! Undefined control sequence. l.4434 \code{\LinkA {vector}{vector}}) or lists. Expressions are not allowed. ! Undefined control sequence. l.4446 length (with a \code {\LinkA{warning}{warning}} if they are recycled only ! Undefined control sequence. l.4446 length (with a \code{\LinkA {warning}{warning}} if they are recycled only [44]] ! Undefined control sequence. l.4454 For \code {cbind} (\code{rbind}), vectors of zero length (including ! Undefined control sequence. l.4454 For \code{cbind} (\code {rbind}), vectors of zero length (including ! Undefined control sequence. l.4455 \code {NULL}) are ignored unless the result would have zero rows ! Undefined control sequence. l.4457 ...ot occur in S3 and are not ignored in \R {}.) ! Undefined control sequence. l.4459 Matrices are restricted to less than \eqn {2^{31}}{} rows and ! Missing $ inserted. $ l.4459 ...ices are restricted to less than \eqn{2^ {31}}{} rows and ! Extra }, or forgotten $. l.4459 ...are restricted to less than \eqn{2^{31}} {} rows and ! Undefined control sequence. l.4461 restriction: as from \R {} 3.2.0 input matrices with more elements (but ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4463 \end{Details} ! Missing $ inserted. $ l.4463 \end{Details} ! Missing } inserted. } l.4463 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4465 \begin{Value} ! Undefined control sequence. l.4466 ...ult method, a matrix combining the \code {...} arguments ! Undefined control sequence. l.4468 the inputs are \code {NULL}, the value is \code{NULL}.) ! Undefined control sequence. l.4468 ...puts are \code{NULL}, the value is \code {NULL}.) Underfull \hbox (badness 2662) in paragraph at lines 4459--4469 []\OT1/cmr/m/n/10 Matrices are re-stricted to less than 2$[][]\OML/cmm/m/it/10 rowsandcolumnsevenon\OT1/cmr/m/n/10 64 \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 10000) in paragraph at lines 4459--4469 \OML/cmm/m/it/10 bitsystems:Soinputvectorshavethesamelengthrestriction \OT1/cmr /m/n/10 : Overfull \hbox (99.19173pt too wide) in paragraph at lines 4459--4469 \OML/cmm/m/it/10 asfrom[]\OT1/cmr/m/n/10 3\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 2\O ML/cmm/m/it/10 :\OT1/cmr/m/n/10 0\OML/cmm/m/it/10 inputmatriceswithmoreelements \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 butmeetingtherowandcolumnrestrictions\OT1/cmr /m/n/10 )\OML/cmm/m/it/10 areallowed:$ ! Undefined control sequence. l.4474 For \code {cbind} (\code{rbind}) the column (row) names are taken from ! Undefined control sequence. l.4474 For \code{cbind} (\code {rbind}) the column (row) names are taken from ! Undefined control sequence. l.4475 the \code {colnames} (\code{rownames}) of the arguments if these are ! Undefined control sequence. l.4475 the \code{colnames} (\code {rownames}) of the arguments if these are ! Undefined control sequence. l.4477 are not supplied and \code {deparse.level > 0}, by deparsing the ! Undefined control sequence. l.4478 expressions given, for \code {deparse.level = 1} only if that gives a ! Undefined control sequence. l.4479 sensible name (a `symbol', see \code {\LinkA{is.symbol}{is.symbol}}). ! Undefined control sequence. l.4479 sensible name (a `symbol', see \code{\LinkA {is.symbol}{is.symbol}}). ! Undefined control sequence. l.4481 For \code {cbind} row names are taken from the first argument with ! Undefined control sequence. l.4485 For \code {rbind} column names are taken from the first argument with ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4488 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4490 \begin{Section} {Data frame methods} ! Undefined control sequence. l.4491 The \code {cbind} data frame method is just a wrapper for ! Undefined control sequence. l.4492 \code {\LinkA{data.frame}{data.frame}(..., check.names = FALSE)}. Thi... ! Undefined control sequence. l.4492 \code{\LinkA {data.frame}{data.frame}(..., check.names = FALSE)}. Thi... ! Undefined control sequence. l.4494 character columns to factors unless \code {stringsAsFactors = FALSE} is ! Undefined control sequence. l.4497 The \code {rbind} data frame method first drops all zero-column and ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4507 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4509 \begin{Section} {Dispatch} ! Undefined control sequence. l.4511 \code {\LinkA{UseMethod}{UseMethod}()}, but by C-internal dispatching. ! Undefined control sequence. l.4511 \code{\LinkA {UseMethod}{UseMethod}()}, but by C-internal dispatching. ! Undefined control sequence. l.4512 Therefore there is no need for, e.g., \code {rbind.default}. ! Undefined control sequence. l.4515 (\file {.../src/main/bind.c}) as [45 [9]] ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4537 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4539 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4543 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4545 \begin{SeeAlso} \relax ! Undefined control sequence. l.4546 \code {\LinkA{c}{c}} to combine vectors (and lists) as vectors, ! Undefined control sequence. l.4546 \code{\LinkA {c}{c}} to combine vectors (and lists) as vectors, ! Undefined control sequence. l.4547 \code {\LinkA{data.frame}{data.frame}} to combine vectors and matrices... ! Undefined control sequence. l.4547 \code{\LinkA {data.frame}{data.frame}} to combine vectors and matrices... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4549 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4551 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4552 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4553 m <- cbind(1, 1:7) # the '1' (= shorter vector) is recycled ! You can't use `macro parameter character #' in horizontal mode. l.4555 m <- cbind(m, 8:14)[, c(1, 3, 2)] # insert a column ! You can't use `macro parameter character #' in horizontal mode. l.4557 cbind(1:7, diag(3)) # vector is subset -> warning ! You can't use `macro parameter character #' in horizontal mode. l.4560 cbind(I = 0, X = rbind(a = 1, b = 1:3)) # use some names ! You can't use `macro parameter character #' in horizontal mode. l.4562 cbind(xx, X = rbind(a = 1, b = 1:3)) # named differently ! You can't use `macro parameter character #' in horizontal mode. l.4564 cbind(0, matrix(1, nrow = 0, ncol = 4)) # > Warning (making sense) ! You can't use `macro parameter character #' in horizontal mode. l.4565 ...ind(0, matrix(1, nrow = 2, ncol = 0))) # -> 2 x 1 ! You can't use `macro parameter character #' in vertical mode. l.4567 # # deparse.level ! You can't use `macro parameter character #' in vertical mode. l.4567 ## deparse.level ! You can't use `macro parameter character #' in horizontal mode. l.4569 ... 2, "a++" = 10, dd, deparse.level = 0) # middle 2 rownames ! You can't use `macro parameter character #' in horizontal mode. l.4570 ... 2, "a++" = 10, dd, deparse.level = 1) # 3 rownames (default) ! You can't use `macro parameter character #' in horizontal mode. l.4571 ... 2, "a++" = 10, dd, deparse.level = 2) # 4 rownames ! You can't use `macro parameter character #' in vertical mode. l.4573 # # cheap row names: ! You can't use `macro parameter character #' in vertical mode. l.4573 ## cheap row names: ! Missing $ inserted. $ l.4575 bf <- setNames(b0, paste0("o", seq_ along(b0))) ! Missing $ inserted. $ l.4583 Underfull \hbox (badness 2591) in paragraph at lines 4573--4583 \OT1/cmr/m/n/10 paste0("o", seq$[]\OML/cmm/m/it/10 long\OT1/cmr/m/n/10 (\OML/cm m/m/it/10 b\OT1/cmr/m/n/10 0)))\OML/cmm/m/it/10 df < \OMS/cmsy/m/n/10 ^^@\OML/c mm/m/it/10 data:frame\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 a \OT1/cmr/m/n/10 = 1\OM L/cmm/m/it/10 ; B \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 b\OT1/cmr/m/n/10 0\OML/cmm /m/it/10 ; f \OT1/cmr/m/n/10 = Underfull \hbox (badness 2828) in paragraph at lines 4573--4583 \OML/cmm/m/it/10 gl\OT1/cmr/m/n/10 (4\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3))\OML /cmm/m/it/10 df: < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 data:frame\OT1/cmr/m/n/ 10 (\OML/cmm/m/it/10 a \OT1/cmr/m/n/10 = 1\OML/cmm/m/it/10 ; B \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 bf; f \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 gl\OT1/cmr/m/n/10 ( 4\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3))\OML/cmm/m/it/10 new < Underfull \hbox (badness 3657) in paragraph at lines 4573--4583 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 rbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 df: ; new\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 stopifnot\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 df\OT1/cmr/m/n/10 1\OML/cmm/m/it /10 ; rbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 df; new; make:row:names \OT1/cmr/m /n/10 = ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4584 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4585 \end{Examples} ! Undefined control sequence. l.4586 \HeaderA {char.expand}{Expand a String with Respect to a Target Table}... ! Undefined control sequence. l.4587 \keyword {character}{char.expand} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4589 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4593 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4595 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4599 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4601 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4602 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4603 \item[\code{input}] a character string to be expanded. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4604 \item[\code{target}] a character vector with the values to be matched ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4606 \item[\code{nomatch}] an \R{} expression to be evaluated in case expa... ! Undefined control sequence. l.4606 \item[\code{nomatch}] an \R {} expression to be evaluated in case expa... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4608 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4609 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4611 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4615 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4617 \begin{Value} ! Undefined control sequence. l.4618 ...ter vector, one of the elements of \code {target} ! Undefined control sequence. l.4619 (unless \code {nomatch} is changed to be a non-error, when it can be a ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4621 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. .. [10. l.4623 \begin{SeeAlso} \relax ! Undefined control sequence. l.4624 \code {\LinkA{charmatch}{charmatch}} and \code{\LinkA{pmatch}{pmatch}}... ! Undefined control sequence. l.4624 \code{\LinkA {charmatch}{charmatch}} and \code{\LinkA{pmatch}{pmatch}}... ! Undefined control sequence. l.4624 ...{\LinkA{charmatch}{charmatch}} and \code {\LinkA{pmatch}{pmatch}} f... ! Undefined control sequence. l.4624 ...{charmatch}{charmatch}} and \code{\LinkA {pmatch}{pmatch}} for perf... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4626 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4628 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4629 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4633 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4634 \end{Examples} ! Undefined control sequence. l.4635 \HeaderA {character}{Character Vectors}{character} ! Undefined control sequence. l.4636 \aliasA {as.character}{character}{as.character} ! Undefined control sequence. l.4637 \methaliasA {as.character.default}{character}{as.character.default} ! Undefined control sequence. l.4638 \methaliasA {as.character.factor}{character}{as.character.factor} ! Undefined control sequence. l.4639 \aliasA {is.character}{character}{is.character} ! Undefined control sequence. l.4640 \keyword {character}{character} ! Undefined control sequence. l.4641 \keyword {classes}{character} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4643 \begin{Description} \relax ! Undefined control sequence. l.4644 Create or test for objects of type \code {"character"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4645 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4647 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 4606--4648 \OT1/cmr/m/n/10 loc-Pars, warn-ing("Could not ex-pand!")) char.expand("mo", loc -Pars) Underfull \hbox (badness 10000) in paragraph at lines 4606--4648 \OT1/cmr/m/n/10 char-ac-ter-Char-ac-ter Vec-torschar-ac-ter as.charactercharact eras.character Overfull \hbox (68.38963pt too wide) in paragraph at lines 4606--4648 \OT1/cmr/m/n/10 as.character.defaultcharacteras.character.default as.character. factorcharacteras.character.factor [46]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4653 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4655 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4656 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4657 \item[\code{length}] A non-negative integer specifying the desired le... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4660 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4661 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4662 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4663 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4665 \begin{Details} \relax ! Undefined control sequence. l.4666 \code {as.character} and \code{is.character} are generic: you can ! Undefined control sequence. l.4666 \code{as.character} and \code {is.character} are generic: you can ! Undefined control sequence. l.4668 see \LinkA {InternalMethods}{InternalMethods}. Further, for \code{as.... ! Undefined control sequence. l.4668 ...s}{InternalMethods}. Further, for \code {as.character} the ! Undefined control sequence. l.4669 default method calls \code {\LinkA{as.vector}{as.vector}}, so dispatch... ! Undefined control sequence. l.4669 default method calls \code{\LinkA {as.vector}{as.vector}}, so dispatch... ! Undefined control sequence. l.4670 methods for \code {as.character} and then for methods for \code{as.vec... ! Undefined control sequence. l.4670 ...haracter} and then for methods for \code {as.vector}. ! Undefined control sequence. l.4672 \code {as.character} represents real and complex numbers to 15 signifi... ! Undefined control sequence. l.4674 \code {DBL\_DIG}, which will be 15 on machines supporting IEC60559 ! Undefined control sequence. l.4680 \code {\LinkA{format}{format}}. ! Undefined control sequence. l.4680 \code{\LinkA {format}{format}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4681 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4683 \begin{Value} ! Undefined control sequence. l.4684 \code {character} creates a character vector of the specified length. ! Undefined control sequence. l.4685 ...nts of the vector are all equal to \code {""}. ! Undefined control sequence. l.4687 \code {as.character} attempts to coerce its argument to character type; ! Undefined control sequence. l.4688 like \code {\LinkA{as.vector}{as.vector}} it strips attributes includi... ! Undefined control sequence. l.4688 like \code{\LinkA {as.vector}{as.vector}} it strips attributes includi... ! Undefined control sequence. l.4689 For lists and pairlists (including \LinkA {language objects}{language ... Underfull \hbox (badness 1072) in paragraph at lines 4687--4692 []\OT1/cmr/m/n/10 as.character at-tempts to co-erce its ar-gu-ment to char-ac-t er type; like ! Undefined control sequence. l.4693 \code {is.character} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.4693 \code{is.character} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.4693 ....character} returns \code{TRUE} or \code {FALSE} depending on ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4695 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4697 \begin{Note} \relax ! Undefined control sequence. l.4698 \code {as.character} breaks lines in language objects at 500 ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4701 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4703 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4707 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4709 \begin{SeeAlso} \relax ! Undefined control sequence. l.4710 \code {\LinkA{options}{options}}: option \code{scipen} affects the con... ! Undefined control sequence. l.4710 \code{\LinkA {options}{options}}: option \code{scipen} affects the con... ! Undefined control sequence. l.4710 ...{\LinkA{options}{options}}: option \code {scipen} affects the conve... ! Undefined control sequence. l.4713 \code {\LinkA{paste}{paste}}, \code{\LinkA{substr}{substr}} and \code{... ! Undefined control sequence. l.4713 \code{\LinkA {paste}{paste}}, \code{\LinkA{substr}{substr}} and \code{... ! Undefined control sequence. l.4713 \code{\LinkA{paste}{paste}}, \code {\LinkA{substr}{substr}} and \code{... ! Undefined control sequence. l.4713 \code{\LinkA{paste}{paste}}, \code{\LinkA {substr}{substr}} and \code{... ! Undefined control sequence. l.4713 ... \code{\LinkA{substr}{substr}} and \code {\LinkA{strsplit}{strsplit}} ! Undefined control sequence. l.4713 ...\LinkA{substr}{substr}} and \code{\LinkA {strsplit}{strsplit}} ! Undefined control sequence. l.4715 \code {\LinkA{chartr}{chartr}} for character translation and casefoldi... ! Undefined control sequence. l.4715 \code{\LinkA {chartr}{chartr}} for character translation and casefoldi... ! Undefined control sequence. l.4716 upper to lower case) and \code {\LinkA{sub}{sub}}, \code{\LinkA{grep}{... ! Undefined control sequence. l.4716 upper to lower case) and \code{\LinkA {sub}{sub}}, \code{\LinkA{grep}{... ! Undefined control sequence. l.4716 ...case) and \code{\LinkA{sub}{sub}}, \code {\LinkA{grep}{grep}} etc for ! Undefined control sequence. l.4716 ...nd \code{\LinkA{sub}{sub}}, \code{\LinkA {grep}{grep}} etc for ! Undefined control sequence. l.4718 \code {help.search(keyword = "character")} gives even more links. ! Undefined control sequence. l.4720 \code {\LinkA{deparse}{deparse}}, which is normally preferable to ! Undefined control sequence. l.4720 \code{\LinkA {deparse}{deparse}}, which is normally preferable to ! Undefined control sequence. l.4721 \code {as.character} for \LinkA{language objects}{language objects}. ! Undefined control sequence. l.4721 \code{as.character} for \LinkA {language objects}{language objects}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4722 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4724 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4725 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4727 as.character(form) # # length 3 ! You can't use `macro parameter character #' in horizontal mode. l.4727 as.character(form) ## length 3 ! You can't use `macro parameter character #' in horizontal mode. l.4728 deparse(form) Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11 # # like the input ! You can't use `macro parameter character #' in horizontal mode. l.4728 deparse(form) ## like the input ! You can't use `macro parameter character #' in horizontal mode. l.4730 a0 <- 11/999 # has a repeating decimal representation ! You can't use `macro parameter character #' in horizontal mode. l.4732 format(a0, digits = 16) # shows one more digit ! You can't use `macro parameter character #' in horizontal mode. l.4734 a2 - a0 # normally around -1e-17 ! You can't use `macro parameter character #' in horizontal mode. l.4735 as.character(a2) # normally different from a1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4737 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4738 \end{Examples} ! Undefined control sequence. l.4739 \HeaderA {charmatch}{Partial String Matching}{charmatch} ! Undefined control sequence. l.4740 \keyword {character}{charmatch} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4742 \begin{Description} \relax ! Undefined control sequence. l.4743 \code {charmatch} seeks matches for the elements of its first argument ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4745 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4747 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4751 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4753 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4754 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4755 \item[\code{x}] the values to be matched: converted to a character ve... ! Undefined control sequence. l.4756 \code {\LinkA{as.character}{as.character}}. \LinkA{Long vectors}{Long... ! Undefined control sequence. l.4756 \code{\LinkA {as.character}{as.character}}. \LinkA{Long vectors}{Long... ! Undefined control sequence. l.4756 ...kA{as.character}{as.character}}. \LinkA {Long vectors}{Long vector... Underfull \hbox (badness 7649) in paragraph at lines 4755--4757 []\OT1/cmr/m/n/10 the val-ues to be matched: con-verted to a char-ac-ter vec-to r by [47]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4757 \item[\code{table}] the values to be matched against: converted to a ... ! Undefined control sequence. l.4758 vector. \LinkA {Long vectors}{Long vectors} are not supported. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4759 \item[\code{nomatch}] the (integer) value to be returned at non-matching ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4761 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4762 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4764 \begin{Details} \relax ! Undefined control sequence. l.4771 ...ple partial matches are found then \code {0} is ! Undefined control sequence. l.4772 ...rned and if no match is found then \code {nomatch} is returned. ! Undefined control sequence. l.4774 \code {NA} values are treated as the string constant \code{"NA"}. ! Undefined control sequence. l.4774 ...are treated as the string constant \code {"NA"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4775 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4777 \begin{Value} ! Undefined control sequence. l.4778 ...teger vector of the same length as \code {x}, giving the ! Undefined control sequence. l.4779 indices of the elements in \code {table} which matched, or \code{nomat... ! Undefined control sequence. l.4779 ... in \code{table} which matched, or \code {nomatch}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4780 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4782 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4784 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4786 \begin{SeeAlso} \relax ! Undefined control sequence. l.4787 \code {\LinkA{pmatch}{pmatch}}, \code{\LinkA{match}{match}}. ! Undefined control sequence. l.4787 \code{\LinkA {pmatch}{pmatch}}, \code{\LinkA{match}{match}}. ! Undefined control sequence. l.4787 \code{\LinkA{pmatch}{pmatch}}, \code {\LinkA{match}{match}}. ! Undefined control sequence. l.4787 \code{\LinkA{pmatch}{pmatch}}, \code{\LinkA {match}{match}}. ! Undefined control sequence. l.4789 \code {\LinkA{startsWith}{startsWith}} for another matching of initial... ! Undefined control sequence. l.4789 \code{\LinkA {startsWith}{startsWith}} for another matching of initial... ! Undefined control sequence. l.4790 \code {\LinkA{grep}{grep}} or \code{\LinkA{regexpr}{regexpr}} for more... ! Undefined control sequence. l.4790 \code{\LinkA {grep}{grep}} or \code{\LinkA{regexpr}{regexpr}} for more... ! Undefined control sequence. l.4790 \code{\LinkA{grep}{grep}} or \code {\LinkA{regexpr}{regexpr}} for more... ! Undefined control sequence. l.4790 \code{\LinkA{grep}{grep}} or \code{\LinkA {regexpr}{regexpr}} for more... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4792 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4794 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4795 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4796 ...ch("", "") # returns 1 ! You can't use `macro parameter character #' in horizontal mode. l.4797 ...ch("m", c("mean", "median", "mode")) # returns 0 ! You can't use `macro parameter character #' in horizontal mode. l.4798 ...ch("med", c("mean", "median", "mode")) # returns 2 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4799 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4800 \end{Examples} ! Undefined control sequence. l.4801 \HeaderA {chartr}{Character Translation and Casefolding}{chartr} ! Undefined control sequence. l.4802 \aliasA {casefold}{chartr}{casefold} ! Undefined control sequence. l.4803 \aliasA {tolower}{chartr}{tolower} ! Undefined control sequence. l.4804 \aliasA {toupper}{chartr}{toupper} ! Undefined control sequence. l.4805 \keyword {character}{chartr} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4807 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4810 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4812 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4819 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4821 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4822 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4823 \item[\code{x}] a character vector, or an object that can be coerced to ! Undefined control sequence. l.4824 character by \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.4824 character by \code{\LinkA {as.character}{as.character}}. Underfull \hbox (badness 1286) in paragraph at lines 4823--4825 []\OT1/cmr/m/n/10 a char-ac-ter vec-tor, or an ob-ject that can be co-erced to char-ac-ter by ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4825 \item[\code{old}] a character string specifying the characters to be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4828 \item[\code{new}] a character string specifying the translations. If a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4831 \item[\code{upper}] logical: translate to upper or lower case?. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4832 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4833 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4835 \begin{Details} \relax ! Undefined control sequence. l.4836 \code {chartr} translates each character in \code{x} that is specified ! Undefined control sequence. l.4836 ...artr} translates each character in \code {x} that is specified ! Undefined control sequence. l.4837 in \code {old} to the corresponding character specified in \code{new}. ! Undefined control sequence. l.4837 ...rresponding character specified in \code {new}. ! Undefined control sequence. l.4839 repeated characters are not. If \code {old} contains more characters ! Undefined control sequence. l.4841 extra characters at the end of \code {new} are ignored. ! Undefined control sequence. l.4843 \code {tolower} and \code{toupper} convert upper-case characters in a ! Undefined control sequence. l.4843 \code{tolower} and \code {toupper} convert upper-case characters in a ! Undefined control sequence. l.4847 \code {casefold} is a wrapper for \code{tolower} and \code{toupper} ! Undefined control sequence. l.4847 \code{casefold} is a wrapper for \code {tolower} and \code{toupper} ! Undefined control sequence. l.4847 ...s a wrapper for \code{tolower} and \code {toupper} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4849 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4851 \begin{Value} ! Undefined control sequence. l.4853 \code {x} (after possible coercion). ! Undefined control sequence. l.4856 the current locale (see \code {\LinkA{Encoding}{Encoding}} if the corr... ! Undefined control sequence. l.4856 the current locale (see \code{\LinkA {Encoding}{Encoding}} if the corr... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4861 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4863 \begin{SeeAlso} \relax ! Undefined control sequence. l.4864 \code {\LinkA{sub}{sub}} and \code{\LinkA{gsub}{gsub}} for other ! Undefined control sequence. l.4864 \code{\LinkA {sub}{sub}} and \code{\LinkA{gsub}{gsub}} for other ! Undefined control sequence. l.4864 \code{\LinkA{sub}{sub}} and \code {\LinkA{gsub}{gsub}} for other ! Undefined control sequenc [12e. l.4864 \code{\LinkA{sub}{sub}} and \code{\LinkA {gsub}{gsub}} for other ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4866 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4868 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4869 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.4876 # # "Mixed Case" Capitalizing - toupper( every first letter of a word ) : ! You can't use `macro parameter character #' in vertical mode. l.4876 ## "Mixed Case" Capitalizing - toupper( every first letter of a word ) : [48]] ! You can't use `macro parameter character #' in horizontal mode. l.4884 # # -> [1] "The Quick Red Fox Jumps Over The Lazy Brown Dog" ! You can't use `macro parameter character #' in horizontal mode. l.4884 ## -> [1] "The Quick Red Fox Jumps Over The Lazy Brown Dog" ! You can't use `macro parameter character #' in vertical mode. l.4886 # # and the better, more sophisticated version: ! You can't use `macro parameter character #' in vertical mode. l.4886 ## and the better, more sophisticated version: ! You can't use `macro parameter character #' in horizontal mode. l.4894 # # -> [1] "Using AIC For Model Selection" ! You can't use `macro parameter character #' in horizontal mode. l.4894 ## -> [1] "Using AIC For Model Selection" ! You can't use `macro parameter character #' in horizontal mode. l.4896 # # -> [1] "Using Aic" "For Model Selection" ! You can't use `macro parameter character #' in horizontal mode. l.4896 ## -> [1] "Using Aic" "For Model Selection" ! You can't use `macro parameter character #' in horizontal mode. l.4897 # # ^^^ ^^^^^ ! You can't use `macro parameter character #' in horizontal mode. l.4897 ## ^^^ ^^^^^ ! Text line contains an invalid character. l.4897 ## ^^^ ^^^^^ ! Text line contains an invalid character. l.4897 ## ^^^ ^^^ ^^ ! You can't use `macro parameter character #' in horizontal mode. l.4898 # # 'bad' 'good' ! You can't use `macro parameter character #' in horizontal mode. l.4898 ## 'bad' 'good' ! You can't use `macro parameter character #' in vertical mode. l.4900 # # -- Very simple insecure crypto -- ! You can't use `macro parameter character #' in vertical mode. l.4900 ## -- Very simple insecure crypto -- ! Missing $ inserted. $ l.4904 I <- seq_ len(k); chartr(p0(A), p0(c(A[-I], A[I])), ch) ! Extra }, or forgotten $. l.4905 } ! Missing $ inserted. $ l.4906 ! You can't use `macro parameter character #' in horizontal mode. l.4908 (crypw <- rot(pw, 13)) # -> you can send this off ! You can't use `macro parameter character #' in vertical mode. l.4910 # # now ``decrypt'' : ! You can't use `macro parameter character #' in vertical mode. l.4910 ## now ``decrypt'' : ! You can't use `macro parameter character #' in horizontal mode. l.4911 rot(crypw, 54 - 13) # -> the original: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4913 \end{ExampleCode} ! Missing } inserted. } l.4913 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4914 \end{Examples} ! Undefined control sequence. l.4915 \HeaderA {chkDots}{Warn About Extraneous Arguments in the "..." of Its... ! Undefined control sequence. l.4916 \keyword {utilities}{chkDots} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4918 \begin{Description} \relax ! Undefined control sequence. l.4919 ... about extraneous arguments in the \code {...} of its caller. A ! Undefined control sequence. l.4920 ... in S3 methods which need a formal \code {...} ! Undefined control sequence. l.4923 \code {chkDots()}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4924 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4926 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4930 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4932 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4933 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4934 \item[\code{...}] ``the dots'', as passed from the caller. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4935 \item[\code{which.call}] passed to \code{\LinkA{sys.call}{sys.call}()... ! Undefined control sequence. l.4935 \item[\code{which.call}] passed to \code {\LinkA{sys.call}{sys.call}()... ! Undefined control sequence. l.4935 ...code{which.call}] passed to \code{\LinkA {sys.call}{sys.call}()}. ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4937 \item[\code{allowed}] not yet implemented: character vector of \emph{... ! Undefined control sequence. l.4938 elements in \code {...} which are ``allowed'' and hence not ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4940 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4941 \end{Arguments} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4943 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4945 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4947 \begin{SeeAlso} \relax ! Undefined control sequence. l.4948 \code {\LinkA{warning}{warning}}, \code{\LinkA{...}{...}}. ! Undefined control sequence. l.4948 \code{\LinkA {warning}{warning}}, \code{\LinkA{...}{...}}. ! Undefined control sequence. l.4948 \code{\LinkA{warning}{warning}}, \code {\LinkA{...}{...}}. ! Undefined control sequence. l.4948 ...\LinkA{warning}{warning}}, \code{\LinkA {...}{...}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4949 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4951 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4952 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4953 seq.default # # <- you will see ' chkDots(...) ' ! You can't use `macro parameter character #' in horizontal mode. l.4953 seq.default ## <- you will see ' chkDots(...) ' ! You can't use `macro parameter character #' in horizontal mode. l.4955 seq(1,5, foo = "bar") # gives warning via chkDots() ! You can't use `macro parameter character #' in vertical mode. l.4957 # # warning with more than one ...-entry: ! You can't use `macro parameter character #' in vertical mode. l.4957 ## warning with more than one ...-entry: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4960 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4961 \end{Examples} ! Undefined control sequence. l.4962 \HeaderA {chol}{The Choleski Decomposition}{chol} ! Undefined control sequence. l.4963 \methaliasA {chol.default}{chol}{chol.default} ! Undefined control sequence. l.4964 \keyword {algebra}{chol} ! Undefined control sequence. l.4965 \keyword {array}{chol} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4967 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4970 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4972 \begin{Usage} Underfull \hbox (badness 2277) in paragraph at lines 4957--4973 []\OT1/cmr/m/n/10 warning with more than one ...-entry: den-sity.f <- func-tion (x, ...) Underfull \hbox (badness 10000) in paragraph at lines 4957--4973 \OT1/cmr/m/n/10 NextMethod("density") x <- den-sity(structure(rnorm(10), class= "f"), Underfull \hbox (badness 10000) in paragraph at lines 4957--4973 \OT1/cmr/m/n/10 bar=TRUE, baz=TRUE) cholThe Choleski De-com-po-si-tion-chol Underfull \hbox (badness 4341) in paragraph at lines 4957--4973 \OT1/cmr/m/n/10 chol.defaultcholchol.default al-ge-bra-chol ar-ray-chol Com-put e the Choleski ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4979 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4981 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4982 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4983 \item[\code{x}] an object for which a method exists. The default method ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4985 \item[\code{...}] arguments to be based to or from methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4986 \item[\code{pivot}] Should pivoting be used? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4987 \item[\code{LINPACK}] logical. Should LINPACK be used (now ignored)? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4988 \item[\code{tol}] A numeric tolerance for use with \code{pivot = TRUE}. ! Undefined control sequence. l.4988 ...] A numeric tolerance for use with \code {pivot = TRUE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4989 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4990 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4992 \begin{Details} \relax ! Undefined control sequence. l.4993 \code {chol} is generic: the description here applies to the default [49 [13] ! Undefined control sequence. l.4996 ... only the upper triangular part of \code {x} is used, so ! Undefined control sequence. l.4997 that \eqn {R'R = x}{} when \code{x} is symmetric. ! Undefined control sequence. l.4997 that \eqn{R'R = x}{} when \code {x} is symmetric. ! Undefined control sequence. l.4999 If \code {pivot = FALSE} and \code{x} is not non-negative definite an ! Undefined control sequence. l.4999 If \code{pivot = FALSE} and \code {x} is not non-negative definite an ! Undefined control sequence. l.5000 error occurs. If \code {x} is positive semi-definite (i.e., some zero ! Undefined control sequence. l.5003 If \code {pivot = TRUE}, then the Choleski decomposition of a positive ! Undefined control sequence. l.5004 semi-definite \code {x} can be computed. The rank of \code{x} is ! Undefined control sequence. l.5004 ...e{x} can be computed. The rank of \code {x} is ! Undefined control sequence. l.5005 returned as \code {attr(Q, "rank")}, subject to numerical errors. ! Undefined control sequence. l.5006 The pivot is returned as \code {attr(Q, "pivot")}. It is no longer ! Undefined control sequence. l.5007 the case that \code {t(Q) \%*\% Q} equals \code{x}. However, setting ! Undefined control sequence. l.5007 ...se that \code{t(Q) \%*\% Q} equals \code {x}. However, setting ! Undefined control sequence. l.5008 \code {pivot <- attr(Q, "pivot")} and \code{oo <- order(pivot)}, it ! Undefined control sequence. l.5008 \code{pivot <- attr(Q, "pivot")} and \code {oo <- order(pivot)}, it ! Undefined control sequence. l.5009 is true that \code {t(Q[, oo]) \%*\% Q[, oo]} equals \code{x}, ! Undefined control sequence. l.5009 ...e{t(Q[, oo]) \%*\% Q[, oo]} equals \code {x}, ! Undefined control sequence. l.5010 or, alternatively, \code {t(Q) \%*\% Q} equals \code{x[pivot, ! Undefined control sequence. l.5010 ...tively, \code{t(Q) \%*\% Q} equals \code {x[pivot, ! Undefined control sequence. l.5013 The value of \code {tol} is passed to LAPACK, with negative values ! Undefined control sequence. l.5014 ...the default tolerance of (usually) \code {nrow(x) * ! Undefined control sequence. l.5016 the pivot is less than \code {tol}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5021 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5023 \begin{Value} ! Undefined control sequence. l.5025 matrix \eqn {R}{} such that \eqn{R'R = x}{} (see example). ! Undefined control sequence. l.5025 matrix \eqn{R}{} such that \eqn {R'R = x}{} (see example). ! Undefined control sequence. l.5028 \code {"pivot"} and \code{"rank"} are also returned. ! Undefined control sequence. l.5028 \code{"pivot"} and \code {"rank"} are also returned. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5029 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5031 \begin{Section} {Warning} ! Undefined control sequence. l.5034 If \code {pivot = TRUE} and \code{x} is not non-negative definite then ! Undefined control sequence. l.5034 If \code{pivot = TRUE} and \code {x} is not non-negative definite then ! Undefined control sequence. l.5036 So only use \code {pivot = TRUE} when \code{x} is non-negative definite ! Undefined control sequence. l.5036 So only use \code{pivot = TRUE} when \code {x} is non-negative definite ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5038 \end{Section} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5040 \begin{Source} \relax ! Undefined control sequence. l.5041 ...n interface to the LAPACK routines \code {DPOTRF} and ! Undefined control sequence. l.5042 \code {DPSTRF}, ! Undefined control sequence. l.5044 LAPACK is from \url {http://www.netlib.org/lapack} and its guide is li... ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5046 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5048 \begin{References} \relax ! Undefined control sequence. l.5052 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.5052 ...http://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.5052 ...w.netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.5053 ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5057 \end{References} ! Missing } inserted. } l.5057 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5059 \begin{SeeAlso} \relax ! Undefined control sequence. l.5060 \code {\LinkA{chol2inv}{chol2inv}} for its \emph{inverse} (without piv... ! Undefined control sequence. l.5060 \code{\LinkA {chol2inv}{chol2inv}} for its \emph{inverse} (without piv... ! Undefined control sequence. l.5061 \code {\LinkA{backsolve}{backsolve}} for solving ]linear systems with u... ! Undefined control sequence. l.5061 \code{\LinkA {backsolve}{backsolve}} for solving linear systems with u... ! Undefined control sequence. l.5064 \code {\LinkA{qr}{qr}}, \code{\LinkA{svd}{svd}} for related matrix fac... ! Undefined control sequence. l.5064 \code{\LinkA {qr}{qr}}, \code{\LinkA{svd}{svd}} for related matrix fac... ! Undefined control sequence. l.5064 \code{\LinkA{qr}{qr}}, \code {\LinkA{svd}{svd}} for related matrix fac... ! Undefined control sequence. l.5064 \code{\LinkA{qr}{qr}}, \code{\LinkA {svd}{svd}} for related matrix fac... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5065 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5067 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5068 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5072 crossprod(cm) # -- = 'm' ! You can't use `macro parameter character #' in vertical mode. l.5074 # now for something positive semi-definite ! Missing $ inserted. $ l.5075 x <- matrix(c(1:5, (1:5)^ 2), 5, 2) ! You can't use `macro parameter character #' in horizontal mode. l.5079 qr(m)$rank # is 2, as it should be Underfull \hbox (badness 5345) in paragraph at lines 5074--5080 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 cbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; x\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 1] + 3 \OMS/cmsy/m/n/10 ^^ C \OML/cmm/m/it/10 x\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 2])\OML /cmm/m/it/10 colnames\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ) \OML/ cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 letters\OT1/cmr/m/n/10 [20 : 22]\OML/cmm/m/it/10 m < ! You can't use `macro parameter character #' in vertical mode. l.5081 # chol() may fail, depending on numerical rounding: ! You can't use `macro parameter character #' in horizontal mode. l.5082 # chol() unlike qr() does not use a tolerance. ! You can't use `macro parameter character #' in horizontal mode. l.5086 # # we can use this by ! You can't use `macro parameter character #' in horizontal mode. l.5086 ## we can use this by ! You can't use `macro parameter character #' in horizontal mode. l.5088 crossprod(Q[, order(pivot)]) # recover m ! You can't use `macro parameter character #' in vertical mode. l.5090 # # now for a non-positive-definite matrix ! You can't use `macro parameter character #' in vertical mode. l.5090 ## now for a non-positive-definite matrix ! You can't use `macro parameter character #' in horizontal mode. l.5092 try(chol(m)) # fails ! You can't use `macro parameter character #' in horizontal mode. l.5093 (Q <- chol(m, pivot = TRUE)) # warning ! You can't use `macro parameter character #' in horizontal mode. l.5094 crossprod(Q) # not equal to m ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5095 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5096 \end{Examples} ! Undefined control sequence. l.5097 \HeaderA {chol2inv}{Inverse from Choleski (or QR) Decomposition}{chol2... ! Undefined control sequence. l.5098 \keyword {algebra}{chol2inv} ! Undefined control sequence. l.5099 \keyword {array}{chol2inv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5101 \begin{Description} \relax ! Undefined control sequence. l.5103 decomposition. Equivalently, compute \eqn {(X'X)^{-1}}{} ! Missing $ inserted. $ l.5103 ...tion. Equivalently, compute \eqn{(X'X)^ {-1}}{} ! Extra }, or forgotten $. l.5103 ... Equivalently, compute \eqn{(X'X)^{-1}} {} ! Undefined control sequence. l.5104 from the (\eqn {R}{} part) of the QR decomposition of \eqn{X}{}. ! Undefined control sequence. l.5104 ...{} part) of the QR decomposition of \eqn {X}{}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5105 \end{Description} ! Missing $ inserted. $ l.5105 \end{Description} ! Missing } inserted. } l.5105 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5107 \begin{Usage} Underfull \hbox (badness 1215) in paragraph at lines 5090--5108 \OT1/cmr/m/n/10 chol2inv al-ge-bra-chol2inv ar-ray-chol2inv In-vert a sym-met-r ic, pos-i-tive def-i- [50] [14 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5111 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5113 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5114 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5115 \item[\code{x}] a matrix. The first \code{size} columns of the upper... ! Undefined control sequence. l.5115 \item[\code{x}] a matrix. The first \code {size} columns of the upper... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5117 \item[\code{size}] the number of columns of \code{x} containing the ! Undefined control sequence. l.5117 ...de{size}] the number of columns of \code {x} containing the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5119 \item[\code{LINPACK}] logical. Defunct and ignored (with a warning f... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5121 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5122 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5124 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5130 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5132 \begin{Source} \relax ! Undefined control sequence. l.5133 ...an interface to the LAPACK routine \code {DPOTRI}. ! Undefined control sequence. l.5134 LAPACK is from \url {http://www.netlib.org/lapack} and its guide is li... ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5136 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5138 \begin{References} \relax ! Undefined control sequence. l.5143 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.5143 ...http://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.5143 ...w.netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.5144 ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5148 \end{References} ! Missing } inserted. } l.5148 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5150 \begin{SeeAlso} \relax ! Undefined control sequence. l.5151 \code {\LinkA{chol}{chol}}, \code{\LinkA{solve}{solve}}. ! Undefined control sequence. l.5151 \code{\LinkA {chol}{chol}}, \code{\LinkA{solve}{solve}}. ! Undefined control sequence. l.5151 \code{\LinkA{chol}{chol}}, \code {\LinkA{solve}{solve}}. ! Undefined control sequence. l.5151 \code{\LinkA{chol}{chol}}, \code{\LinkA {solve}{solve}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5152 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5154 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5155 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5158 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5159 \end{Examples} ! Undefined control sequence. l.5160 \HeaderA {class}{Object Classes}{class} ! Undefined control sequence. l.5161 \aliasA {class<\Rdash{}}{class}{class<.Rdash.} ! Undefined control sequence. l.5161 \aliasA{class<\Rdash {}}{class}{class<.Rdash.} ! Undefined control sequence. l.51]62 \aliasA {inherits}{class}{inherits} ! Undefined control sequence. l.5163 \aliasA {oldClass}{class}{oldClass} ! Undefined control sequence. l.5164 \aliasA {oldClass<\Rdash{}}{class}{oldClass<.Rdash.} ! Undefined control sequence. l.5164 \aliasA{oldClass<\Rdash {}}{class}{oldClass<.Rdash.} ! Undefined control sequence. l.5165 \aliasA {unclass}{class}{unclass} ! Undefined control sequence. l.5166 \keyword {methods}{class} ! Undefined control sequence. l.5167 \keyword {classes}{class} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5169 \begin{Description} \relax ! Undefined control sequence. l.5170 \R {} possesses a simple generic function mechanism which can be used for ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5173 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5175 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5185 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5187 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5188 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5189 \item[\code{x}] a \R{} object ! Undefined control sequence. l.5189 \item[\code{x}] a \R {} object ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5190 \item[\code{what, value}] a character vector naming classes. \code{v... ! Undefined control sequence. l.5190 ... character vector naming classes. \code {value} ! Undefined control sequence. l.5191 can also be \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5192 \item[\code{which}] logical affecting return value: see `Details'. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5193 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5194 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5196 \begin{Details} \relax ! Undefined control sequence. l.5200 Many \R {} objects have a \code{class} attribute, a character vector ! Undefined control sequence. l.5200 Many \R{} objects have a \code {class} attribute, a character vector ! Undefined control sequence. l.5203 class, \code {"matrix"}, \code{"array"} or the result of ! Undefined control sequence. l.5203 class, \code{"matrix"}, \code {"array"} or the result of ! Undefined control sequence. l.5204 \code {\LinkA{mode}{mode}(x)} (except that integer vectors have implic... ! Undefined control sequence. l.5204 \code{\LinkA {mode}{mode}(x)} (except that integer vectors have implic... ! Undefined control sequence. l.5205 \code {"integer"}). (Functions \code{oldClass} and ! Undefined control sequence. l.5205 \code{"integer"}). (Functions \code {oldClass} and ! Undefined control sequence. l.5206 \code {oldClass<-} get and set the attribute, which can also be done ! Undefined control sequence. l.5209 Note that \code {\LinkA{NULL}{NULL}} objects cannot have attributes (h... ! Undefined control sequence. l.5209 Note that \code{\LinkA {NULL}{NULL}} objects cannot have attributes (h... ! Undefined control sequence. l.5212 When a generic function \code {fun} is applied to an object with class ! Undefined control sequence. l.5213 attribute \code {c("first", "second")}, the system searches for a ! Undefined control sequence. l.5214 function called \code {fun.first} and, if it finds it, applies it to ! Undefined control sequence. l.5216 \code {fun.second} is tried. If no class name produces a suitable ! Undefined control sequence. l.5217 function, the function \code {fun.default} is used (if it exists). If ! Undefined control sequence. l.5221 The function \code {class} prints the vector of names of classes an ! Undefined control sequence. l.5222 ...t inherits from. Correspondingly, \code {class<-} sets the ! Undefined control sequence. l.5223 ...n object inherits from. Assigning \code {NULL} removes the [51 [15] ! Undefined control sequence. l.5226 \code {unclass} returns (a copy of) its argument with its class ! Undefined control sequence. l.5230 \code {inherits} indicates whether its first argument inherits from any ! Undefined control sequence. l.5231 of the classes specified in the \code {what} argument. If \code{which} ! Undefined control sequence. l.5231 ...d in the \code{what} argument. If \code {which} ! Undefined control sequence. l.5232 is \code {TRUE} then an integer vector of the same length as ! Undefined control sequence. l.5233 \code {what} is returned. Each element indicates the position in the ! Undefined control sequence. l.5234 \code {class(x)} matched by the element of \code{what}; zero indicates ! Undefined control sequence. l.5234 ...lass(x)} matched by the element of \code {what}; zero indicates ! Undefined control sequence. l.5235 no match. If \code {which} is \code{FALSE} then \code{TRUE} is ! Undefined control sequence. l.5235 no match. If \code{which} is \code {FALSE} then \code{TRUE} is ! Undefined control sequence. l.5235 ... \code{which} is \code{FALSE} then \code {TRUE} is ! Undefined control sequence. l.5236 returned by \code {inherits} if any of the names in \code{what} match ! Undefined control sequence. l.5236 ...e{inherits} if any of the names in \code {what} match ! Undefined control sequence. l.5237 with any \code {class}. ! Undefined control sequence. l.5239 All but \code {inherits} are \LinkA{primitive}{primitive} functions. ! Undefined control sequence. l.5239 All but \code{inherits} are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5240 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5242 \begin{Section} {Formal classes} ! Undefined control sequence. l.5244 ``S4'', is available in package \pkg {methods} which is attached ! Undefined control sequence. l.5246 returned by \code {class} as a character vector of length one and ! Undefined control sequence. l.5250 does \code {inherits}. Therefore, S3 methods can be defined for S4 ! Undefined control sequence. l.5251 classes. See the `\LinkA {Introduction}{Introduction}' and `\LinkA{Me... ! Undefined control sequence. l.5251 ...Introduction}{Introduction}' and `\LinkA {Methods\_for\_S3}{Methods... ! Undefined control sequence. l.5258 \code {\LinkA{as}{as}(object, value)} is the way to coerce an object to a ! Undefined control sequence. l.5258 \code{\LinkA {as}{as}(object, value)} is the way to coerce an object to a ! Undefined control sequence. l.5261 The analogue of \code {inherits} for formal classes is ! Undefined control sequence. l.5262 \code {\LinkA{is}{is}}. The two functions behave consistently ! Undefined control sequence. l.5262 \code{\LinkA {is}{is}}. The two functions behave consistently ! Undefined control sequence. l.5264 ...h an explicit test. In this case, \code {is} will ! Undefined control sequence. l.5265 test the condition, but \code {inherits} ignores all conditional ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5267 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5269 \begin{Note} \relax ! Undefined control sequence. l.5270 Functions \code {oldClass} and \code{oldClass<-} behave in the same way ! Undefined control sequence. l.5270 Functions \code{oldClass} and \code {oldClass<-} behave in the same way ! Undefined control sequence. l.5271 ...se names in S-PLUS 5/6, \emph{but} in \R {} ! Undefined control sequence. l.5272 \code {\LinkA{UseMethod}{UseMethod}} dispatches on the class as return... ! Undefined control sequence. l.5272 \code{\LinkA {UseMethod}{UseMethod}} dispatches on the class as return... ! Undefined control sequence. l.5273 \code {class} (with some interpolated classes: see the link) rather ! Undefined control sequence. l.5274 than \code {oldClass}. \emph{However}, \LinkA{group generic}{group ge... ! Undefined control sequence. l.5274 ...\code{oldClass}. \emph{However}, \LinkA {group generic}{group gene... ! Undefined control sequence. l.5275 on the \code {oldClass} for efficiency, and \LinkA{internal generic}{i... ! Undefined control sequence. l.5275 ...ode{oldClass} for efficiency, and \LinkA {internal generic}{interna... ! Undefined control sequence. l.5276 only dispatch on objects for which \code {\LinkA{is.object}{is.object}... ! Undefined control sequence. l.5276 ...spatch on objects for which \code{\LinkA {is.object}{is.object}} is... ! Undefined control sequence. l.5278 In older versions of \R {}, assigning a zero-length vector with ! Undefined control sequence. l.5279 \code {class} removed the class: it is now an error (whereas it ! Undefined control sequence. l.5280 still works for \code {oldClass}). It is clearer to always assign \co... ! Undefined control sequence. l.5280 ...). It is clearer to always assign \code {NULL} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5282 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5284 \begin{SeeAlso} \relax ! Undefined control sequence. l.5285 \code {\LinkA{UseMethod}{UseMethod}}, \code{\LinkA{NextMethod}{NextMet... ! Undefined control sequence. l.5285 \code{\LinkA {UseMethod}{UseMethod}}, \code{\LinkA{NextMethod}{NextMet... ! Undefined control sequence. l.5285 \code{\LinkA{UseMethod}{UseMethod}}, \code {\LinkA{NextMethod}{NextMet... ! Undefined control sequence. l.5285 ...nkA{UseMethod}{UseMethod}}, \code{\LinkA {]NextMethod}{NextMethod}}, ! Undefined control sequence. l.5286 `\LinkA {group generic}{group generic}', `\LinkA{internal generic}{int... ! Undefined control sequence. l.5286 ...{group generic}{group generic}', `\LinkA {internal generic}{interna... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5287 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5289 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5290 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5292 class(x) # "numeric" ! You can't use `macro parameter character #' in horizontal mode. l.5293 oldClass(x) # NULL ! You can't use `macro parameter character #' in horizontal mode. l.5294 inherits(x, "a") # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.5296 inherits(x,"a") # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.5297 inherits(x, "a", TRUE) # 1 ! You can't use `macro parameter character #' in horizontal mode. l.5298 inherits(x, c("a", "b", "c"), TRUE) # 1 2 0 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5299 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5300 \end{Examples} ! Undefined control sequence. l.5301 \HeaderA {col}{Column Indexes}{col} ! Undefined control sequence. l.5302 \keyword {array}{col} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5304 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5307 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5309 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5313 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5315 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5316 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5317 \item[\code{x}] a matrix-like object, that is one with a two-dimensional ! Undefined control sequence. l.5318 \code {dim}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5319 \item[\code{as.factor}] a logical value indicating whether the value ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5322 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5323 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5325 \begin{Value} ! Undefined control sequence. l.5326 ...matrix with the same dimensions as \code {x} and whose ! Undefined control sequence. l.5327 \code {ij}-th element is equal to \code{j} (or the \code{j}-th column ... ! Undefined control sequence. l.5327 \code{ij}-th element is equal to \code {j} (or the \code{j}-th column ... ! Undefined control sequence. l.5327 ...ement is equal to \code{j} (or the \code {j}-th column label). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5328 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5330 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5334 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5336 \begin{SeeAlso} \relax ! Undefined control sequence. l.5337 \code {\LinkA{row}{row}} to get rows. ! Undefined control sequence. l.5337 \code{\LinkA {row}{row}} to get rows. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5338 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5340 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5341 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5342 # extract an off-diagonal of a matrix [52 Underfull \hbox (badness 10000) in paragraph at lines 1432--1439 @textrm `@texttt RnavGraph/inst/tcl[]@textrm '[], `@texttt RProtoBuf/inst/pytho n[]@textrm '[] and `@texttt emdbook/inst/BUGS[]@textrm '[] and [16] ! You can't use `macro parameter character #' in vertical mode. l.5346 # create an identity 5-by-5 matrix ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5349 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5350 \end{Examples} ! Undefined control sequence. l.5351 \HeaderA {Colon}{Colon Operator}{Colon} ! Undefined control sequence. l.5352 \aliasA {:}{Colon}{:} ! Undefined control sequence. l.5353 \aliasA {colon}{Colon}{colon} ! Undefined control sequence. l.5354 \keyword {manip}{Colon} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5356 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5358 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5360 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5365 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5367 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5368 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5369 \item[\code{from}] starting value of sequence. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5370 \item[\code{to}] (maximal) end value of the sequence. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5371 \item[\code{a, b}] \code{\LinkA{factor}{factor}}s of the same length. ! Undefined control sequence. l.5371 \item[\code{a, b}] \code {\LinkA{factor}{factor}}s of the same length. ! Undefined control sequence. l.5371 \item[\code{a, b]}] \code{\LinkA {factor}{factor}}s of the same length. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5372 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5373 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5375 \begin{Details} \relax ! Undefined control sequence. l.5376 The binary operator \code {:} has two meanings: for factors \code{a:b} is ! Undefined control sequence. l.5376 ...e{:} has two meanings: for factors \code {a:b} is ! Undefined control sequence. l.5377 equivalent to \code {\LinkA{interaction}{interaction}(a, b)} (but the ... ! Undefined control sequence. l.5377 equivalent to \code{\LinkA {interaction}{interaction}(a, b)} (but the ... ! Undefined control sequence. l.5380 For other arguments \code {from:to} is equivalent to \code{seq(from, t... ! Undefined control sequence. l.5380 ...ts \code{from:to} is equivalent to \code {seq(from, to)}, ! Undefined control sequence. l.5381 and generates a sequence from \code {from} to \code{to} in steps of \c... ! Undefined control sequence. l.5381 ...tes a sequence from \code{from} to \code {to} in steps of \code{1} ! Undefined control sequence. l.5381 ...ode{from} to \code{to} in steps of \code {1} ! Undefined control sequence. l.5382 or \code {-1}. Value \code{to} will be included if it differs from ! Undefined control sequence. l.5382 or \code{-1}. Value \code {to} will be included if it differs from ! Undefined control sequence. l.5383 \code {from} by an integer up to a numeric fuzz of about \code{1e-7}. ! Undefined control sequence. l.5383 ...eger up to a numeric fuzz of about \code {1e-7}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5387 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5389 \begin{Value} ! Undefined control sequence. l.5391 \code {\LinkA{integer}{integer}} if \code{from} is integer-valued and ... ! Undefined control sequence. l.5391 \code{\LinkA {integer}{integer}} if \code{from} is integer-valued and ... ! Undefined control sequence. l.5391 \code{\LinkA{integer}{integer}} if \code {from} is integer-valued and ... ! Undefined control sequence. l.5392 is representable in the \R {} integer type, otherwise of type ! Undefined control sequence. l.5393 \code {"double"} (aka \code{\LinkA{mode}{mode}} \code{"\LinkA{numeric}... ! Undefined control sequence. l.5393 \code{"double"} (aka \code {\LinkA{mode}{mode}} \code{"\LinkA{numeric}... ! Undefined control sequence. l.5393 \code{"double"} (aka \code{\LinkA {mode}{mode}} \code{"\LinkA{numeric}... ! Undefined control sequence. l.5393 ...e"} (aka \code{\LinkA{mode}{mode}} \code {"\LinkA{numeric}{numeric}... ! Undefined control sequence. l.5393 ... \code{\LinkA{mode}{mode}} \code{"\LinkA {numeric}{numeric}"}). ! Undefined control sequence. l.5395 ...red factor with levels labelled as \code {la:lb} ! Undefined control sequence. l.5396 ...rdered lexicographically (that is, \code {lb} varies fastest). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5397 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5399 \begin{References} \relax ! Undefined control sequence. l.5403 ...numeric arguments: S does not have \code {:} for factors.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5404 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5406 \begin{SeeAlso} \relax ! Undefined control sequence. l.5407 \code {\LinkA{seq}{seq}} (a \emph{generalization} of \code{from:to}). ! Undefined control sequence. l.5407 \code{\LinkA {seq}{seq}} (a \emph{generalization} of \code{from:to}). ! Undefined control sequence. l.5407 ...{seq}} (a \emph{generalization} of \code {from:to}). ! Undefined control sequence. l.5409 As an alternative to using \code {:} for factors, \code{\LinkA{interac... ! Undefined control sequence. l.5409 ...ive to using \code{:} for factors, \code {\LinkA{interaction}{inter... ! Undefined control sequence. l.5409 ...using \code{:} for factors, \code{\LinkA {interaction}{interaction}}. ! Undefined control sequence. l.5411 For \code {:} used in the formal representation of an interaction, see ! Undefined control sequence. l.5412 \code {\LinkA{formula}{formula}}. ! Undefined control sequence. l.5412 \code{\LinkA {formula}{formula}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5413 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5415 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5416 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5418 pi:6 # real ! You can't use `macro parameter character #' in horizontal mode. l.5419 6:pi # integer ! You can't use `macro parameter character #' in horizontal mode. l.5423 f1:f2 # a factor, the "cross" f1 x f2 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5424 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5425 \end{Examples} ! Undefined control sequence. l.5426 \HeaderA {colSums}{Form Row and Column Sums and Means}{colSums} ! Undefined control sequence. l.5427 \aliasA {.colMeans}{colSums}{.colMeans} ! Undefined control sequence. l.5428 \aliasA {.colSums}{colSums}{.colSums} ! Undefined control sequence. l.5429 \aliasA {.rowMeans}{colSums}{.rowMeans} ! Undefined control sequence. l.5430 \aliasA {.rowSums}{colSums}{.rowSums} ! Undefined control sequence. l.5431 \aliasA {colMeans}{colSums}{colMeans} ! Undefined control sequence. l.5432 \aliasA {rowMeans}{colSums}{rowMeans} ! Undefined control sequence. l.5433 \aliasA {rowSums}{colSums}{rowSums} ! Undefined control sequence. l.5434 \keyword {array}{colSums} ! Undefined control sequence. l.5435 \keyword {algebra}{colSums} ! Undefined control sequence. l.5436 \keyword {arith}{colSums} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5438 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5440 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5442 \begin{Usage} Underfull \hbox (badness 1939) in paragraph at lines 5421--5443 \OT1/cmr/m/n/10 col-Sums-Form Row and Col-umn Sums and Meanscol-Sums .colMeansc ol- Underfull \hbox (badness 10000) in paragraph at lines 5421--5443 \OT1/cmr/m/n/10 Sums.colMeans .col-Sum-scol-Sums.colSums .rowMeanscol-Sums.rowM eans Underfull \hbox (badness 10000) in paragraph at lines 5421--5443 \OT1/cmr/m/n/10 .row-Sum-scol-Sums.rowSums colMeanscol-Sum-scolMeans rowMeansco l-Sum- [53 [17] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5454 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5456 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5457 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5458 \item[\code{x}] an array of two or more dimensions, containing numeric, ! Undefined control sequence. l.5460 \code {.colSums()} etc, a numeric, integer or logical matrix (or ! Undefined control sequence. l.5461 vector of length \code {m * n}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5462 \item[\code{na.rm}] logical. Should missing values (including \code{... ! Undefined control sequence. l.5462 ... Should missing values (including \code {NaN}) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5464 \item[\code{dims}] integer: Which dimensions are regarded as `rows' or ! Undefined control sequence. l.5465 `columns' to sum over. For \code {row*}, the sum or mean is ! Undefined control sequence. l.5466 over dimensions \code {dims+1, ...}; for \code{col*} it is over ! Undefined control sequence. l.5466 ...dimensions \code{dims+1, ...}; for \code {col*} it is over ! Undefined control sequence. l.5467 dimensions \code {1:dims}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5468 \item[\code{m, n}] the dimensions of the matrix \code{x} for ! Undefined control sequence. l.5468 ..., n}] the dimensions of the matrix \code {x} for ! Undefined control sequence. l.5469 \code {.colSums()} etc. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5470 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5471 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5473 \begin{Details} \relax ! Undefined control sequence. l.5474 ...functions are equivalent to use of \code {\LinkA{apply}{apply}} with ! Undefined control sequence. l.5474 ...ns are equivalent to use of \code{\LinkA {apply}{apply}} with ! Undefined control sequence. l.5475 \code {FUN = mean} or \code{FUN = sum} with appropriate margins, but ! Undefined control sequence. l.5475 \code{FUN = mean} or \code {FUN = sum} with appropriate margins, but ! Undefined control sequence. l.5477 of the subtleties of \code {NaN} and \code{NA}. If \code{na.rm = ! Undefined control sequence. l.5477 of the subtleties of \code{NaN} and \code {NA}. If \code{na.rm = ! Undefined control sequence. l.5477 ...s of \code{NaN} and \code{NA}. If \code {na.rm = ! Undefined control sequence. l.5478 FALSE} and either \code {NaN} or \code{NA} appears in a sum, the ! Undefined control sequence. l.5478 FALSE} and either \code{NaN} or \code {NA} appears in a sum, the ! Undefined control sequence. l.5479 result will be one of \code {NaN} or \code{NA}, but which might be ! Undefined control sequence. l.5479 result will be one of \code{NaN} or \code {NA}, but which might be ! Undefined control sequence. l.5485 them with \code {\LinkA{na.omit}{na.omit}} or \code{\LinkA{complete.ca... ! Undefined control sequence. l.5485 them with \code{\LinkA {na.omit}{na.omit}} or \code{\LinkA{complete.ca... ! Undefined control sequence. l.5485 ...\code{\LinkA{na.omit}{na.omit}} or \code {\LinkA{complete.cases}{co... ! Undefined control sequence. l.5485 ...LinkA{na.omit}{na.omit}} or \code{\LinkA {complete.cases}{complete.... ! Undefined control sequence. l.5486 (possibly on the transpose of \code {x}). ! Undefined control sequence. l.5488 ...s with an initial dot in the name (\code {.colSums()} etc) ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5491 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5493 \begin{Value} ! Undefined control sequence. l.5495 ... For the first four functions the \code {dimnames} ! Undefined control sequence. l.5496 (or \code {names} for a vector result) are taken from the original ! Undefined control sequence. l.5500 missing values with \code {na.rm = TRUE}), that ! Undefined control sequence. l.5501 component of the output is set to \code {0} (\code{*Sums}) or \code{NaN} ! Undefined control sequence. l.5501 ... of the output is set to \code{0} (\code {*Sums}) or \code{NaN} ! Undefined control sequence. l.5501 ... set to \code{0} (\code{*Sums}) or \code {NaN}] ! Undefined control sequence. l.5502 (\code {*Means}), consistent with \code{\LinkA{sum}{sum}} and ! Undefined control sequence. l.5502 (\code{*Means}), consistent with \code {\LinkA{sum}{sum}} and ! Undefined control sequence. l.5502 ...e{*Means}), consistent with \code{\LinkA {sum}{sum}} and ! Undefined control sequence. l.5503 \code {\LinkA{mean}{mean}}. ! Undefined control sequence. l.5503 \code{\LinkA {mean}{mean}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5504 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5506 \begin{SeeAlso} \relax ! Undefined control sequence. l.5507 \code {\LinkA{apply}{apply}}, \code{\LinkA{rowsum}{rowsum}} ! Undefined control sequence. l.5507 \code{\LinkA {apply}{apply}}, \code{\LinkA{rowsum}{rowsum}} ! Undefined control sequence. l.5507 \code{\LinkA{apply}{apply}}, \code {\LinkA{rowsum}{rowsum}} ! Undefined control sequence. l.5507 \code{\LinkA{apply}{apply}}, \code{\LinkA {rowsum}{rowsum}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5508 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5510 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5511 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5512 # # Compute row and column sums for a matrix: ! You can't use `macro parameter character #' in horizontal mode. l.5512 ## Compute row and column sums for a matrix: ! You can't use `macro parameter character #' in vertical mode. l.5527 # # an array ! You can't use `macro parameter character #' in vertical mode. l.5527 ## an array Underfull \hbox (badness 10000) in paragraph at lines 5527--5531 []\OT1/cmr/m/n/10 an ar-ray dim(UCBAdmissions) row-Sums(UCBAdmissions); row- Underfull \hbox (badness 10000) in paragraph at lines 5527--5531 \OT1/cmr/m/n/10 Sums(UCBAdmissions, dims = 2) col-Sums(UCBAdmissions); col- ! You can't use `macro parameter character #' in vertical mode. l.5532 # # complex case ! You can't use `macro parameter character #' in vertical mode. l.5532 ## complex case ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5538 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5539 \end{Examples} ! Undefined co [18ntrol sequence. l.5540 \HeaderA {commandArgs}{Extract Command Line Arguments}{commandArgs} ! Undefined control sequence. l.5541 \keyword {environment}{commandArgs} ! Undefined control sequence. l.5542 \keyword {sysdata}{commandArgs} ! Undefined control sequence. l.5543 \keyword {programming}{commandArgs} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5545 \begin{Description} \relax ! Undefined control sequence. l.5547 this \R {} session was invoked. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5548 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5550 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5554 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5556 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5557 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5558 \item[\code{trailingOnly}] logical. Should only arguments after ! Undefined control sequence. l.5559 \option {--args} be returned? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5560 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5561 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5563 \begin{Details} \relax ! Undefined control sequence. l.5564 ...ents are captured before the standard \R {} command line ! Undefined control sequence. l.5566 ...is is especially useful with the \option {--args} ! Undefined control sequence. l.5567 command-line flag to \R {}, as all of the command line after that flag ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5569 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5571 \begin{Value} ! Undefined control sequence. l.5574 of the executable by which \R {} was invoked. The exact form of this ! Undefined control sequence. l.5577 embedded \R {} it can be anything the programmer supplied. [54]] ! Undefined control sequence. l.5579 If \code {trailingOnly = TRUE}, a character vector of those arguments ! Undefined control sequence. l.5580 (if any) supplied after \option {--args}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5581 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5583 \begin{SeeAlso} \relax ! Undefined control sequence. l.5584 \code {\LinkA{Startup}{Startup}} ! Undefined control sequence. l.5584 \code{\LinkA {Startup}{Startup}} ! Undefined control sequence. l.5585 \code {\LinkA{BATCH}{BATCH}} ! Undefined control sequence. l.5585 \code{\LinkA {BATCH}{BATCH}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5586 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5588 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5589 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5591 # # Spawn a copy of this application as it was invoked, ! You can't use `macro parameter character #' in horizontal mode. l.5591 ## Spawn a copy of this application as it was invoked, ! You can't use `macro parameter character #' in horizontal mode. l.5592 # # subject to shell quoting issues ! You can't use `macro parameter character #' in horizontal mode. l.5592 ## subject to shell quoting issues ! You can't use `macro parameter character #' in horizontal mode. l.5593 # # system(paste(commandArgs(), collapse = " ")) ! You can't use `macro parameter character #' in horizontal mode. l.5593 ## system(paste(commandArgs(), collapse = " ")) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5594 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5595 \end{Examples} ! Undefined control sequence. l.5596 \HeaderA {comment}{Query or Set a \code{"comment"} Attribute}{comment} ! Undefined control sequence. l.5596 \HeaderA{comment}{Query or Set a \code {"comment"} Attribute}{comment} ! Undefined control sequence. l.5597 \aliasA {comment<\Rdash{}}{comment}{comment<.Rdash.} ! Undefined control sequence. l.5597 \aliasA{comment<\Rdash {}}{comment}{comment<.Rdash.} ! Undefined control sequence. l.5598 \keyword {attribute}{comment} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5600 \begin{Description} \relax ! Undefined control sequence. l.5602 attribute for any \R {} objects. This is typically useful for ! Undefined control sequence. l.5603 \code {\LinkA{data.frame}{data.frame}}s or model fits. ! Undefined control sequence. l.5603 \code{\LinkA {data.frame}{data.frame}}s or model fits. ! Undefined control sequence. l.5605 Contrary to other \code {\LinkA{attributes}{attributes}}, the \code{co... ! Undefined control sequence. l.5605 Contrary to other \code{\LinkA {attributes}{attributes}}, the \code{co... ! Undefined control sequence. l.5605 ...inkA{attributes}{attributes}}, the \code {comment} is not ! Undefined control sequence. l.5606 printed (by \code {\LinkA{print}{print}} or \code{\LinkA{print.default... ! Undefined control sequence. l.5606 printed (by \code{\LinkA {print}{print}} or \code{\LinkA{print.default... ! Undefined control sequence. l.5606 ...(by \code{\LinkA{print}{print}} or \code {\LinkA{print.default}{pri... ! Undefined control sequence. l.5606 ...de{\LinkA{print}{print}} or \code{\LinkA {print.default}{print.defa... ! Undefined control sequence. l.5608 Assigning \code {NULL} or a zero-length character vector removes the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5610 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5612 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5617 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5619 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5620 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5621 \item[\code{x}] any \R{} object ! Undefined control sequence. l.5621 \item[\code{x}] any \R {} object ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5622 \item[\code{value}] a \code{character} vector, or \code{NULL}. ! Undefined control sequence. l.5622 \item[\code{value}] a \code {character} vector, or \code{NULL}. ! Undefined control sequence. l.5622 ...ue}] a \code{character} vector, or \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5623 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5624 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5626 \begin{SeeAlso} \relax ! Undefined control sequence. l.5627 \code {\LinkA{attributes}{attributes}} and \code{\LinkA{attr}{attr}} f... ! Undefined control sequence. l.5627 \code{\LinkA {attributes}{attributes}} and \code{\LinkA{attr}{attr}} f... ! Undefined control sequence. l.5627 ...LinkA{attributes}{attributes}} and \code {\LinkA{attr}{attr}} for o... ! Undefined control sequence. l.5627 ...ttributes}{attributes}} and \code{\LinkA {attr}{attr}} for other at... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5628 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5630 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5631 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5633 ...my very important data from experiment # 0234", ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5637 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5638 \end{Examples} ! Undefined control sequence. l.5639 \HeaderA {Comparison}{Relational Operators}{Comparison} ! Undefined control sequence. l.5640 \aliasA {"!=}{Comparison}{!=} ! Undefined control sequence. l.5641 \aliasA {<}{Comparison}{<} ! Undefined control sequence. l.5642 \aliasA {<=}{Comparison}{<=} ! Undefined control sequence. l.5643 \aliasA {==}{Comparison}{==} ! Undefined control sequence. l.5644 \aliasA {>}{Comparison}{>} ! Undefined control sequence. l.5645 \aliasA {>=}{Comparison}{>=} ! Undefined control sequence. l.5646 \aliasA {collation}{Comparison}{collation} ! Undefined control sequence. l.5647 \keyword [19 {logic}{Comparison} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5649 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5651 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5653 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5662 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5664 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5665 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5666 \item[\code{x, y}] atomic vectors, symbols, calls, or other objects f... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5668 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5669 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5671 \begin{Details} \relax ! Undefined control sequence. l.5674 \code {\LinkA{Ops}{S3groupGeneric}}) group generic function. (See ! Undefined control sequence. l.5674 \code{\LinkA {Ops}{S3groupGeneric}}) group generic function. (See ! Undefined control sequence. l.5675 \code {\LinkA{Ops}{S3groupGeneric}} for how dispatch is computed.) ! Undefined control sequence. l.5675 \code{\LinkA {Ops}{S3groupGeneric}} for how dispatch is computed.) ! Undefined control sequence. l.5679 \code {\LinkA{locales}{locales}}. The collating sequence of locales s... ! Undefined control sequence. l.5679 \code{\LinkA {locales}{locales}}. The collating sequence of locales s... ! Undefined control sequence. l.5680 \samp {en\_US} is normally different from \samp{C} (which should use ! Undefined control sequence. l.5680 ...en\_US} is normally different from \samp {C} (which should use ! Undefined control sequence. l.5682 ... collation order: e.g.~in Estonian \code {Z} comes between ! Undefined control sequence. l.5683 \code {S} and \code{T}, and collation is not necessarily ! Undefined control sequence. l.5683 \code{S} and \code {T}, and collation is not necessarily ! Undefined control sequence. l.5684 character-by-character -- in Danish \code {aa} sorts as a single ! Undefined control sequence. l.5685 letter, after \code {z}. In Welsh \code{ng} may or may not be a single ! Undefined control sequence. l.5685 letter, after \code{z}. In Welsh \code {ng} may or may not be a single ! Undefined control sequence. l.5686 sorting unit: if it is it follows \code {g}. Some platforms may [55]] ! Undefined control sequence. l.5694 (see \code {\LinkA{Encoding}{Encoding}}): they are translated to UTF-8... ! Undefined control sequence. l.5694 (see \code{\LinkA {Encoding}{Encoding}}): they are translated to UTF-8... ! Undefined control sequence. l.5700 At least one of \code {x} and \code{y} must be an atomic vector, but if ! Undefined control sequence. l.5700 At least one of \code{x} and \code {y} must be an atomic vector, but if ! Undefined control sequence. l.5701 the other is a list \R {} attempts to coerce it to the type of the atomic ! Undefined control sequence. l.5709 Missing values (\code {\LinkA{NA}{NA}}) and \code{\LinkA{NaN}{NaN}} va... ! Undefined control sequence. l.5709 Missing values (\code{\LinkA {NA}{NA}}) and \code{\LinkA{NaN}{NaN}} va... ! Undefined control sequence. l.5709 ...values (\code{\LinkA{NA}{NA}}) and \code {\LinkA{NaN}{NaN}} values are ! Undefined control sequence. l.5709 ...(\code{\LinkA{NA}{NA}}) and \code{\LinkA {NaN}{NaN}} values are ! Undefined control sequence. l.5711 involving them will always result in \code {NA}. Missing values can ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5717 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5719 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5726 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5728 \begin{Section} {S4 methods} ! Undefined control sequence. l.5729 These operators are members of the S4 \code {\LinkA{Compare}{Compare}}... ! Undefined control sequence. l.5729 ...ators are members of the S4 \code{\LinkA {Compare}{Compare}} group ... ! Undefined control sequence. l.5731 group generic (or the \code {Ops} group generic), with arguments ! Undefined control sequence. l.5732 \code {c(e1, e2)}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5733 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5735 \begin{Note} \relax ! Undefined control sequence. l.5736 Do not use \code {==} and \code{!=} for tests, such as in \code{if} ! Undefined control sequence. l.5736 Do not use \code{==} and \code {!=} for tests, such as in \code{if} ! Undefined control sequence. l.5736 ...nd \code{!=} for tests, such as in \code [20 {if} ! Undefined control sequence. l.5737 ...sions, where you must get a single \code {TRUE} or ! Undefined control sequence. l.5738 \code {FALSE}. Unless you are absolutely sure that nothing unusual ! Undefined control sequence. l.5739 can happen, you should use the \code {\LinkA{identical}{identical}} fu... ! Undefined control sequence. l.5739 can happen, you should use the \code{\LinkA {identical}{identical}} fu... ! Undefined control sequence. l.5742 ...rical and complex values, remember \code {==} and \code{!=} do ! Undefined control sequence. l.5742 ...lex values, remember \code{==} and \code {!=} do ! Undefined control sequence. l.5744 error. Using \code {\LinkA{all.equal}{all.equal}} with \code{identica... ! Undefined control sequence. l.5744 error. Using \code{\LinkA {all.equal}{all.equal}} with \code{identica... ! Undefined control sequence. l.5744 ...\LinkA{all.equal}{all.equal}} with \code {identical} is almost ! Undefined control sequence. l.5749 e.g.~\code {`<`(x, y)}: see the description of how ! Undefined control sequence. l.5750 argument-matching is done in \code {\LinkA{Ops}{Ops}}. ! Undefined control sequence. l.5750 argument-matching is done in \code{\LinkA {Ops}{Ops}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5751 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5753 \begin{References} \relax ! Undefined control sequence. l.5760 \url {https://en.wikipedia.org/wiki/Collating_sequence}. The ! Missing $ inserted. $ l.5760 ...https://en.wikipedia.org/wiki/Collating_ sequence}. The ! Extra }, or forgotten $. l.5760 ...n.wikipedia.org/wiki/Collating_sequence} . The ! Undefined control sequence. l.5762 (\url {http://unicode.org/reports/tr10/}) is likely to be increasingly ! Undefined control sequence. l.5763 influential. Where available \R {} by default makes use of ICU ! Undefined control sequence. l.5764 (\url {http://site.icu-project.org/}) for collation (except in a C ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5766 \end{References} ! Missing $ inserted. $ l.5766 \end{References} ! Missing } inserted. } l.5766 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5768 \begin{SeeAlso} \relax ! Undefined control sequence. l.5769 \code {\LinkA{factor}{factor}} for the behaviour with factor arguments. ! Undefined control sequence. l.5769 \code{\LinkA {factor}{factor}} for the behaviour with factor arguments. Overfull \hbox (810.1509pt too wide) in paragraph at lines 5758--5770 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Collating$[]\OML/cmm/m/it/10 eque nce:The[]\OT1/cmr/m/n/10 ([])\OML/cmm/m/it/10 islikelytobeincreasinglyinfluenti al:Whereavailable[]bydefaultmakesuseofICU\OT1/cmr/m/n/10 ([])\OML/cmm/m/it/10 f orcollation\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 exceptinaClocale\OT1/cmr/m/n/10 )\ OML/cmm/m/it/10 :$ ! Undefined control sequence. l.5771 \code {\LinkA{Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.5771 \code{\LinkA {Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.5773 \code {\LinkA{capabilities}{capabilities}} for whether ICU is availabl... ! Undefined control sequence. l.5773 \code{\LinkA {capabilities}{capabilities}} for whether ICU is availabl... ! Undefined control sequence. l.5774 \code {\LinkA{icuSetCollate}{icuSetCollate}} to tune the string collat... ! Undefined control sequence. l.5774 \code{\LinkA {icuSetCollate}{icuSetCollate}} to tune the string collat... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5776 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5778 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5779 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.5786 x1 == x2 # FALSE on most machines ! You can't use `macro parameter character #' in horizontal mode. l.5787 identical(all.equal(x1, x2), TRUE) # TRUE everywhere ! You can't use `macro parameter character #' in vertical mode. l.5790 # range of most 8-bit charsets, as well as of Latin-1 in Unicode ! Missing $ inserted. $ l.5792 x <- if(l10n_ info()$MBCS) { ! You can't use `macro parameter character #' in horizontal mode. l.5795 # # by number ! You can't use `macro parameter character #' in horizontal mode. l.5795 ## by number ! You can't use `macro parameter character #' in horizontal mode. l.5797 # # by locale collation ! You can't use `macro parameter character #' in horizontal mode. l.5797 ## by locale collation ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5799 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5800 \end{Examples} ! Undefined control sequence. l.5801 \HeaderA {complex}{Complex Numbers and Basic Functionality}{complex} ! Undefined control sequence. l.5802 \aliasA {Arg}{complex}{Arg} ! Undefined control sequence. l.5803 \aliasA {as.complex}{complex}{as.complex} ! Undefined control sequence. l.5804 \aliasA {Conj}{com]plex}{Conj} ! Undefined control sequence. l.5805 \aliasA {Im}{complex}{Im} ! Undefined control sequence. l.5806 \aliasA {is.complex}{complex}{is.complex} ! Undefined control sequence. l.5807 \aliasA {Mod}{complex}{Mod} ! Undefined control sequence. l.5808 \aliasA {Re}{complex}{Re} ! Undefined control sequence. l.5809 \keyword {complex}{complex} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5811 \begin{Description} \relax ! Undefined control sequence. l.5812 ...s which support complex arithmetic in \R {}, in addition to ! Undefined control sequence. l.5813 the arithmetic operators \code {+}, \code{-}, \code{*}, \code{/}, and ... ! Undefined control sequence. l.5813 the arithmetic operators \code{+}, \code {-}, \code{*}, \code{/}, and ... ! Undefined control sequence. l.5813 ...etic operators \code{+}, \code{-}, \code {*}, \code{/}, and \code{\... ! Undefined control sequence. l.5813 ...tors \code{+}, \code{-}, \code{*}, \code {/}, and \code{\textasciic... ! Undefined control sequence. l.5813 ... \code{-}, \code{*}, \code{/}, and \code {\textasciicircum{}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5814 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5816 \begin{Usage} Underfull \hbox (badness 3861) in paragraph at lines 5790--5817 []\OT1/cmr/m/n/10 range of most 8-bit charsets, as well as of Latin-1 in Uni-co de Underfull \hbox (badness 4181) in paragraph at lines 5790--5817 \OT1/cmr/m/n/10 z <- c(32:126, 160:255) x <- if(l10n$[]\OML/cmm/m/it/10 nfo\OT1 /cmr/m/n/10 ()$MBCS) int-ToUtf8(z, mul- Underfull \hbox (badness 3199) in paragraph at lines 5790--5817 \OT1/cmr/m/n/10 ti-ple = TRUE) else raw-ToChar(as.raw(z), mul-ti-ple = TRUE) by Underfull \hbox (badness 3098) in paragraph at lines 5790--5817 \OT1/cmr/m/n/10 num-ber write-Lines(strwrap(paste(x, col-lapse=" "), width = 60 )) by Underfull \hbox (badness 6691) in paragraph at lines 5790--5817 \OT1/cmr/m/n/10 lo-cale col-la-tion write-Lines(strwrap(paste(sort(x), col-laps e=" "), width Underfull \hbox (badness 4096) in paragraph at lines 5790--5817 \OT1/cmr/m/n/10 = 60)) com-plex-Com-plex Num-bers and Ba-sic Func-tion-al-i-t y-complex [56] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5829 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5831 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5832 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5833 \item[\code{length.out}] numeric. Desired length of the output vector, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5835 \item[\code{real}] numeric vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5836 \item[\code{imaginary}] numeric vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5837 \item[\code{modulus}] numeric vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5838 \item[\code{argument}] numeric vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5839 \item[\code{x}] an object, probably of mode \code{complex}. ! Undefined control sequence. l.5839 ...de{x}] an object, probably of mode \code {complex}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5840 \item[\code{z}] an object of mode \code{complex}, or one of a class f... ! Undefined control sequence. l.5840 \item[\code{z}] an object of mode \code {complex}, or one of a class f... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5842 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or Underfull \hbox (badness 10000) in paragraph at lines 1852--1857 []@textrm [@texttt libRlapack[] @textrm in-cludes all the double-precision LA- PACK rou-tines which Underfull \hbox (badness 2875) in paragraph at lines 1852--1857 @textrm were cur-rent in 2003: a list of which rou-tines are in-cluded is in f ile [21LaTeX Companion for explanation. Type H for immediate help. ... l.5843 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5844 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5846 \begin{Details} \relax ! Undefined control sequence. l.5847 Complex vectors can be created with \code {complex}. The vector can be ! Undefined control sequence. l.5852 \code {as.complex} attempts to coerce its argument to be of complex ! Undefined control sequence. l.5853 type: like \code {\LinkA{as.vector}{as.vector}} it strips attributes i... ! Undefined control sequence. l.5853 type: like \code{\LinkA {as.vector}{as.vector}} it strips attributes i... ! Undefined control sequence. l.5854 names. Up to \R {} versions 3.2.x, all forms of \code{NA} and \code{NaN} ! Undefined control sequence. l.5854 ... \R{} versions 3.2.x, all forms of \code {NA} and \code{NaN} ! Undefined control sequence. l.5854 ... 3.2.x, all forms of \code{NA} and \code {NaN} ! Undefined control sequence. l.5855 were coerced to a complex \code {NA}, i.e., the \code{\LinkA{NA\_compl... ! Undefined control sequence. l.5855 ... to a complex \code{NA}, i.e., the \code {\LinkA{NA\_complex\_}{NA.... ! Undefined control sequence. l.5855 ...omplex \code{NA}, i.e., the \code{\LinkA {NA\_complex\_}{NA.Rul.com... ! Undefined control sequence. l.5856 ...h the real and imaginary parts are \code {NA}. ! Undefined control sequence. l.5857 Since \R {} 3.3.0, typically only objects which are \code{NA} in parts ! Undefined control sequence. l.5857 ..., typically only objects which are \code {NA} in parts ! Undefined control sequence. l.5858 are coerced to complex \code {NA}, but others with \code{NaN} parts, ! Undefined control sequence. l.5858 ...complex \code{NA}, but others with \code {NaN} parts, ! Undefined control sequence. l.5860 \code {NaN}'s (but no \code{NA}'s) are involved typically will ! Undefined control sequence. l.5860 \code{NaN}'s (but no \code {NA}'s) are involved typically will ! Undefined control sequence. l.5861 \emph{not} give complex \code {NA} but complex numbers with real or ! Undefined control sequence. l.5862 imaginary parts of \code {NaN}. ! Undefined control sequence. l.5864 Note that \code {is.complex} and \code{is.numeric} are never both ! Undefined control sequence. l.5864 Note that \code{is.complex} and \code {is.numeric} are never both ! Undefined control sequence. l.5865 \code {TRUE}. ! Undefined control sequence. l.5867 The functions \code {Re}, \code{Im}, \code{Mod}, \code{Arg} and ! Undefined control sequence. l.5867 The functions \code{Re}, \code {Im}, \code{Mod}, \code{Arg} and ! Undefined control sequence. l.5867 The functions \code{Re}, \code{Im}, \code {Mod}, \code{Arg} and ! Undefined control sequence. l.5867 ... \code{Re}, \code{Im}, \code{Mod}, \code {Arg} and ! Undefined control sequence. l.5868 \code {Conj} have their usual interpretation as returning the real ! Undefined control sequence. l.5871 coordinates}. If \eqn {z = x + i y}{} with real \eqn{x}{} and \eqn{y}... ! Undefined control sequence. l.5871 .... If \eqn{z = x + i y}{} with real \eqn {x}{} and \eqn{y}{}, for ! Undefined control sequence. l.5871 ... x + i y}{} with real \eqn{x}{} and \eqn {y}{}, for ! Undefined control sequence. l.5872 \eqn {r = Mod(z) = \sqrt{x^2 + y^2}}{}, ! Missing $ inserted. $ l.5872 \eqn{r = Mod(z) = \sqrt{ x^2 + y^2}}{}, ! Extra }, or forgotten $. l.5872 \eqn{r = Mod(z) = \sqrt{x^2 + y^2}} {}, ! Undefined control sequence. l.5873 and \eqn {\phi = Arg(z)}{}, \eqn{x = r*\cos(\phi)}{} and ! Undefined control sequence. l.5873 and \eqn{\phi = Arg(z)}{}, \eqn {x = r*\cos(\phi)}{} and ! Undefined control sequence. l.5874 \eqn {y = r*\sin(\phi)}{}. They are all ! Undefined control sequence. l.5875 \LinkA {internal generic}{internal generic} \LinkA{primitive}{primitiv... ! Undefined control sequence. l.5875 ...ternal generic}{internal generic} \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.5877 individually or \emph{via} the \code {\LinkA{Complex}{S3groupGeneric}} ! Undefined control sequence. l.5877 individually or \emph{via} the \code{\LinkA {Complex}{S3groupGeneric}} ! Missing $ inserted. $ l.5879 Overfull \hbox (234.89351pt too wide) in paragraph at lines 5867--5879 [][]\OML/cmm/m/it/10 ; and[][]; [][]and[][]:Theyareall[][][][]functions \OT1/cm r/m/n/10 : Overfull \hbox (54.38156pt too wide) in paragraph at lines 5867--5879 \OML/cmm/m/it/10 methodscanbedefinedforthemindividuallyor[]the[]groupgeneric:$ ! Undefined control sequence. l.5880 ... to the arithmetic operators (see \LinkA {Arithmetic}{Arithmetic}) ! Undefined control sequence. l.5881 \code {+}, \code{-}, \code{*}, \code{/}, and \code{\textasciicircum{}}... ! Undefined control sequence. l.5881 \code{+}, \code {-}, \code{*}, \code{/}, and \code{\textasciicircum{}}... ! Undefined control sequence. l.5881 \code{+}, \code{-}, \code {*}, \code{/}, and \code{\textasciicircum{}}... ! Undefined control sequence. l.5881 \code{+}, \code{-}, \code{*}, \code {/}, and \code{\textasciicircum{}}... ! Undefined control sequence. l.5881 ... \code{-}, \code{*}, \code{/}, and \code {\textasciicircum{}}, the ... ! Undefined control sequence. l.5885 Matrix multiplications (\code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent... ! Undefined control sequence. l.5885 Matrix multiplications (\code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent... ! Undefined control sequence. l.5885 ... multiplications (\code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.... ! Undefined control sequence. l.5885 ...ions (\code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}}, \... ! Undefined control sequence. l.5885 ...*\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code {\LinkA{cros]sprod}{crosspr... ! Undefined control sequence. l.5885 ...ent{}}{.Rpcent.*.Rpcent.}}, \code{\LinkA {crossprod}{crossprod}}, ! Undefined control sequence. l.5886 \code {\LinkA{tcrossprod}{tcrossprod}}) are also defined for complex m... ! Undefined control sequence. l.5886 \code{\LinkA {tcrossprod}{tcrossprod}}) are also defined for complex m... ! Undefined control sequence. l.5887 (\code {\LinkA{matrix}{matrix}}), and so are \code{\LinkA{solve}{solve}}, ! Undefined control sequence. l.5887 (\code{\LinkA {matrix}{matrix}}), and so are \code{\LinkA{solve}{solve}}, ! Undefined control sequence. l.5887 ...inkA{matrix}{matrix}}), and so are \code {\LinkA{solve}{solve}}, ! Undefined control sequence. l.5887 ...trix}{matrix}}), and so are \code{\LinkA {solve}{solve}}, ! Undefined control sequence. l.5888 \code {\LinkA{eigen}{eigen}} or \code{\LinkA{svd}{svd}}. ! Undefined control sequence. l.5888 \code{\LinkA {eigen}{eigen}} or \code{\LinkA{svd}{svd}}. ! Undefined control sequence. l.5888 \code{\LinkA{eigen}{eigen}} or \code {\LinkA{svd}{svd}}. ! Undefined control sequence. l.5888 \code{\LinkA{eigen}{eigen}} or \code{\LinkA {svd}{svd}}. Underfull \hbox (badness 10000) in paragraph at lines 5885--5889 []\OT1/cmr/m/n/10 Matrix mul-ti-pli-ca-tions (*.Rp-cent.*.Rpcent., crossprod-cr ossprod, [57 [22] ! Undefined control sequence. l.5890 ...x numbers are stored as a pair of \LinkA {double}{double} ! Undefined control sequence. l.5891 ...rs, either or both of which can be \code {\LinkA{NaN}{NaN}} ! Undefined control sequence. l.5891 ...her or both of which can be \code{\LinkA {NaN}{NaN}} ! Undefined control sequence. l.5892 (including \code {NA}, see \code{\LinkA{NA\_complex\_}{NA.Rul.complex.... ! Undefined control sequence. l.5892 (including \code{NA}, see \code {\LinkA{NA\_complex\_}{NA.Rul.complex.... ! Undefined control sequence. l.5892 (including \code{NA}, see \code{\LinkA {NA\_complex\_}{NA.Rul.complex.... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5894 \end{Details} ! Missing } inserted. } l.5894 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5896 \begin{Section} {S4 methods} ! Undefined control sequence. l.5897 \code {as.complex} is primitive and can have S4 methods set. ! Undefined control sequence. l.5899 \code {Re}, \code{Im}, \code{Mod}, \code{Arg} and \code{Conj} ! Undefined control sequence. l.5899 \code{Re}, \code {Im}, \code{Mod}, \code{Arg} and \code{Conj} ! Undefined control sequence. l.5899 \code{Re}, \code{Im}, \code {Mod}, \code{Arg} and \code{Conj} ! Undefined control sequence. l.5899 \code{Re}, \code{Im}, \code{Mod}, \code {Arg} and \code{Conj} ! Undefined control sequence. l.5899 ...de{Im}, \code{Mod}, \code{Arg} and \code {Conj} ! Undefined control sequence. l.5901 \code {\LinkA{Complex}{S4groupGeneric}} and so S4 methods can be ! Undefined control sequence. l.5901 \code{\LinkA {Complex}{S4groupGeneric}} and so S4 methods can be ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5903 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5905 \begin{Note} \relax ! Undefined control sequence. l.5906 ...ns and functions involving complex \code {\LinkA{NaN}{NaN}} mostly ! Undefined control sequence. l.5906 ...functions involving complex \code{\LinkA {NaN}{NaN}} mostly ! Undefined control sequence. l.5907 rely on the C library's handling of \samp {double complex} arithmetic, ! Undefined control sequence. l.5908 which typically returns \code {complex(re=NaN, im=NaN)} (but we have ! Undefined control sequence. l.5910 For \code {+} and \code{-}, \R{}'s own handling works strictly ! Undefined control sequence. l.5910 For \code{+} and \code {-}, \R{}'s own handling works strictly ! Undefined control sequence. l.5910 For \code{+} and \code{-}, \R ] {}'s own handling works strictly ! Undefined control sequence. l.5913 Operations involving complex \code {NA}, i.e., \code{\LinkA{NA\_comple... ! Undefined control sequence. l.5913 ...involving complex \code{NA}, i.e., \code {\LinkA{NA\_complex\_}{NA.... ! Undefined control sequence. l.5913 ...ng complex \code{NA}, i.e., \code{\LinkA {NA\_complex\_}{NA.Rul.com... ! Undefined control sequence. l.5914 \code {\LinkA{NA\_complex\_}{NA.Rul.complex.Rul.}}. ! Undefined control sequence. l.5914 \code{\LinkA {NA\_complex\_}{NA.Rul.complex.Rul.}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5915 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5917 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5921 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5923 \begin{SeeAlso} \relax ! Undefined control sequence. l.5924 \code {\LinkA{Arithmetic}{Arithmetic}}; \code{\LinkA{polyroot}{polyroo... ! Undefined control sequence. l.5924 \code{\LinkA {Arithmetic}{Arithmetic}}; \code{\LinkA{polyroot}{polyroo... ! Undefined control sequence. l.5924 ...e{\LinkA{Arithmetic}{Arithmetic}}; \code {\LinkA{polyroot}{polyroot... ! Undefined control sequence. l.5924 ...A{Arithmetic}{Arithmetic}}; \code{\LinkA {polyroot}{polyroot}} find... ! Undefined control sequence. l.5924 ...inkA{polyroot}{polyroot}} finds all \eqn {n}{} ! Undefined control sequence. l.5925 ...lex roots of a polynomial of degree \eqn {n}{}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5926 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5928 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5929 \begin{ExampleCode} ! Missing $ inserted. $ l.5932 0i ^ (-3:3) ! Missing $ inserted. $ l.5933 ! Missing $ inserted. $ l.5934 matrix(1i^ (-6:5), nrow = 4) #- all columns are the same ! You can't use `macro parameter character #' in math mode. l.5934 matrix(1i^ (-6:5), nrow = 4) # > - all columns are the same ! You can't use `macro parameter character #' in math mode. l.5935 0 ^ 1i # a complex NaN ! Missing $ inserted. $ l.5936 ! You can't use `macro parameter character #' in vertical mode. l.5937 # # create a complex normal vector ! You can't use `macro parameter character #' in vertical mode. l.5937 ## create a complex normal vector ! You can't use `macro parameter character #' in horizontal mode. l.5939 # # or also (less efficiently): ! You can't use `macro parameter character #' in horizontal mode. l.5939 ## or also (less efficiently): ! You can't use `macro parameter character #' in vertical mode. l.5942 # # The Arg(.) is an angle: ! You can't use `macro parameter character #' in vertical mode. l.5942 ## The Arg(.) is an angle: ! Missing $ inserted. $ l.5946 ...ion(paste("Rotation by "," ", pi == 180^ o))) ! Missing $ inserted. $ l.5949 ! You can't use `macro parameter character #' in vertical mode. l.5952 # # The exact result of this *depends* on the platform, compiler, math... ! You can't use `macro parameter character #' in vertical mode. l.5952 ## The exact result of this *depends* on the platform, compiler, math... ! Missing $ inserted. $ l.5953 (NpNA <- NaN + NA_ complex_) ; str(NpNA) # *behaves* as 'cplx NA' .. ! You can't use `macro parameter character #' in math mode. l.5953 (NpNA <- NaN + NA_complex_) ; str(NpNA) # *behaves* as 'cplx NA' .. ! You can't use `macro parameter character #' in math mode. l.5955 showC(NpNA)# but not always is {shows '(R = NaN, I = NA)' on some pl... ! You can't use `macro parameter character #' in math mode. l.5956 # # and this is not TRUE everywhere: ! You can't use `macro parameter character #' in math mode. l.5956 ## and this is not TRUE everywhere: ! You can't use `macro parameter character #' in math mode. l.5958 showC(NA_complex_) # always == (R = NA, I = NA) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5959 \end{ExampleCode} ! Missing $ inserted. $ l.5959 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5960 \end{Examples} ! Undefined control sequence. l.5961 \HeaderA {conditions}{Condition Handling and Recovery}{conditions} ! Undefined control sequence. l.5962 \aliasA {.handleSimpleError}{conditions}{.handleSimpleError} ! Undefined control sequence. l.5963 \aliasA {.signalSimpleWarning}{conditions}{.signalSimpleWarning} ! Undefined control sequence. l.5964 \aliasA {.tryResumeInterrupt}{conditions}{.tryResumeInterrupt} ! Undefined control sequence. l.5965 \aliasA {as.character.condition}{conditions}{as.character.condition} ! Undefined control sequence. l.5966 \aliasA {as.character.error}{conditions}{as.character.error} ! Undefined control sequence. l.5967 \aliasA {computeRestarts}{conditions}{computeRestarts} ! Undefined control sequence. l.5968 \aliasA {condition}{conditions}{condition} ! Undefined control sequence. l.5969 \aliasA {conditionCall}{conditions}{conditionCall} ! Undefined control sequence. l.5970 \methaliasA {co for immediate help. ... l.5992 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5995 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.5997 \begin{Usage} Underfull \hbox (badness 6141) in paragraph at lines 5952--5998 []\OT1/cmr/m/n/10 The ex-act re-sult of this *de-pends* on the plat-form, com-p iler, Underfull \hbox (badness 2913) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 math-library: (NpNA <- NaN + NA$[]\OML/cmm/m/it/10 omplex[]\OT1 /cmr/m/n/10 ; \OML/cmm/m/it/10 str\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NpNA\OT1/cm r/m/n/10 ) \OMS/cmsy/m/n/10 ^^C \OML/cmm/m/it/10 behaves \OMS/cmsy/m/n/10 ^^C Overfull \hbox (610.31023pt too wide) in paragraph at lines 5952--5998 \OML/cmm/m/it/10 as[]cplxNA[]::stopifnot\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 is:na \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NpNA\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; is:na \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NA[]omplex[]; is:na\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 Re\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NA[]omplex[]\OT1/cmr/m/n/10 )\OML/c mm/m/it/10 ; is:na\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Im\OT1/cmr/m/n/10 (\OML/cmm /m/it/10 NA[]omplex[]\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 showC\OT1/cmr/m/n/10 (\ OML/cmm/m/it/10 NpNA\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 butnotalwaysis[]andthisis notTRUEeverywhere \OT1/cmr/m/n/10 : Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OML/cmm/m/it/10 identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NpNA; NA[]omplex[]s howC\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NA[]omplex[]always \OT1/cmr/m/n/10 == (\O ML/cmm/m/it/10 R \OT1/cmr/m/n/10 = Underfull \hbox (badness 2469) in paragraph at lines 5952--5998 \OML/cmm/m/it/10 NA; I \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 NA\OT1/cmr/m/n/10 )$ con-di-tion-sCon-di-tion Han-dling and Re-cov-erycon-di-tions Underfull \hbox (badness 6300) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 .han-dleS-im-pleEr-ror-con-di-tions.handleSimpleError .sig-nal- Sim-ple-Warn-ing-con-di- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 as.character.conditionconditionsas.character.condition Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 as.character.errorconditionsas.character.error com-put-eR-estar tscon-di-tion- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 scom-put-eR-estarts con-di-tion-con-di-tion-scon-di-tion con-di -tion-Call-con-di-tion- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 scon-di-tion-Call con-di-tion-Call.conditionconditionscondition Call.condition Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 con-di-tion-Mes-sage-con-di-tion-scon-di-tion-Mes-sage con-di-t ion-Mes- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 sage.conditionconditionsconditionMessage.condition find-Restart -con-di-tions- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 find-Restart in-vok-eR-estart-con-di-tion-sin-vok-eR-estart in- vok-eR-estart-In-ter-ac- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 tive-ly-con-di-tion-sin-vok-eR-estart-In-ter-ac-tively is-Resta rt-con-di-tion-sis-Restart Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 print.conditionconditionsprint.condition print.restartcondition sprint.restart Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 restart-De-scrip-tion-con-di-tion-srestart-De-scrip-tion restar t-For-malscon-di-tion- Underfull \hbox (badness 10000) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 srestart-For-mals sig-nal-Con-di-tion-con-di-tion-ssig-nal-Con- di-tion sim-ple-Con-di-tion- Underfull \hbox (badness 1527) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 con-di-tion-ssim-ple-Con-di-tion sim-pleEr-ror-con-di-tion-ssim -pleEr-ror sim-pleMes-sage- Underfull \hbox (badness 6110) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 con-di-tion-ssim-pleMes-sage sim-ple-Warn-ing-con-di-tion-ssim- ple-Warn-ing tryCatch- Underfull \hbox (badness 2057) in paragraph at lines 5952--5998 \OT1/cmr/m/n/10 con-di-tionstryCatch with-Call-ing-Han-dler-scon-di-tion-swith- Call-ing-Han-dlers with- [58]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6040 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6042 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6043 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6044 \item[\code{c}] a condition object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6045 \item[\code{call}] call expression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6046 \item[\code{cond}] a condition object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6047 \item[\code{expr}] expression to be evaluated. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6048 \item[\code{finally}] expression to be evaluated before returning or ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6049 \item[\code{h}] function. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6050 \item[\code{message}] character string. [59 [24] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6051 \item[\code{msg}] character string. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6052 \item[\code{name}] character string naming a restart. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6053 \item[\code{r}] restart object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6054 \item[\code{x}] object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6055 \item[\code{...}] additional arguments; see details below. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6056 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6057 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6059 \begin{Details} \relax ! Undefined control sequence. l.6069 \code {condition}. Errors and warnings are objects inheriting ! Undefined control sequence. l.6070 from the abstract subclasses \code {error} and \code{warning}. ! Undefined control sequence. l.6070 ...stract subclasses \code{error} and \code {warning}. ! Undefined control sequence. l.6071 The class \code {simpleError} is the class used by \code{stop} ! Undefined control sequence. l.6071 ...{simpleError} is the class used by \code {stop} ! Undefined control sequence. l.6072 ...nternal error signals. Similarly, \code {simpleWarning} ! Undefined control sequence. l.6073 is used by \code {warning}, and \code{simpleMessage} is used by ! Undefined control sequence. l.6073 is used by \code{warning}, and \code {simpleMessage} is used by ! Undefined control sequence. l.6074 \code {message}. The constructors by the same names take a string ! Undefined control sequence. l.6076 functions \code {conditionMessage} and \code{conditionCall} are ! Undefined control sequence. l.6076 functions \code{conditionMessage} and \code {conditionCall} are ! Undefined control sequence. l.6079 Cond]itions are signaled by \code {signalCondition}. In addition, ! Undefined control sequence. l.6080 the \code {stop} and \code{warning} functions have been modified to ! Undefined control sequence. l.6080 the \code{stop} and \code {warning} functions have been modified to ! Undefined control sequence. l.6083 The function \code {tryCatch} evaluates its expression argument ! Undefined control sequence. l.6084 ...where the handlers provided in the \code {...} ! Undefined control sequence. l.6085 argument are available. The \code {finally} expression is then ! Undefined control sequence. l.6086 evaluated in the context in which \code {tryCatch} was called; that ! Undefined control sequence. l.6087 ...e handlers supplied to the current \code {tryCatch} call are ! Undefined control sequence. l.6088 not active when the \code {finally} expression is evaluated. ! Undefined control sequence. l.6090 Handlers provided in the \code {...} argument to \code{tryCatch} ! Undefined control sequence. l.6090 ...ided in the \code{...} argument to \code {tryCatch} ! Undefined control sequence. l.6091 ... the duration of the evaluation of \code {expr}. ! Undefined control sequence. l.6092 ...dition is signaled when evaluating \code {expr} then ! Undefined control sequence. l.6093 \code {tryCatch} returns the value of the expression. ! Undefined control sequence. l.6095 ...ition is signaled while evaluating \code {expr} then ! Undefined control sequence. l.6098 ... handlers are supplied in a single \code {tryCatch} then ! Undefined control sequence. l.6101 \code {tryCatch} call that established the handler, the handler ! Undefined control sequence. l.6105 \code {tryCatch} call. ! Undefined control sequence. l.6107 Calling handlers are established by \code {withCallingHandlers}. If ! Undefined control sequence. l.6109 ...ler, then the handler is called by \code {signalCondition} in ! Undefined control sequence. l.6113 ...e the last handler has been tried, \code {signalCondition} ! Undefined control sequence. l.6114 returns \code {NULL}. ! Undefined control sequence. l.6116 ...rrupts signal a condition of class \code {interrupt} that ! Undefined control sequence. l.6117 inherits directly from class \code {condition} before executing the ! Undefined control sequence. l.6121 established using \code {withRestarts}. One pre-established restart is ! Undefined control sequence. l.6122 an \code {abort} restart that represents a jump to top level. ! Undefined control sequence. l.6124 \code {findRestart} and \code{computeRestarts} find the available [60] ! Undefined control sequence. l.6124 \code{findRestart} and \code {computeRestarts} find the available ! Undefined control sequence. l.6125 restarts. \code {findRestart} returns the most recently established ! Undefined control sequence. l.6126 restart of the specified name. \code {computeRestarts} returns a ! Undefined control sequence. l.6130 \code {invokeRestart} transfers control to the point where the ! Undefined control sequence. l.6133 \code {invokeRestart}. The restart argument to \code{invokeRestart} ! Undefined control sequence. l.6133 ...Restart}. The restart argument to \code {invokeRestart} ! Undefined control sequence. l.6134 ... a character string, in which case \code {findRestart} is used ! Undefined control sequence. l.6137 New restarts for \code {withRestarts} can be specified in several ways. ! Undefined control sequence. l.6138 The simplest is in \code {name = function} form where the function is ! Undefined control sequence. l.6140 variant is as \code {name = string} where the string is stored in the ! Undefined control sequence. l.6141 \code {description} field of the restart object returned by ! Undefined control sequence. l.6142 \code {findRestart}; in this case the handler ignores its arguments ! Undefined control sequence. l.6143 and returns \code {NULL}. The most flexible form of a restart ! Undefined control sequence. l.6145 \code {handler}, \code{description}, and \code{test}. The ! Undefined control sequence. l.6145 \code{handler}, \code {description}, and \code{test}. The ! Undefined control sequence. l.6145 ...{handler}, \code{description}, and \code {test}. The ! Undefined control sequence. l.6146 \code {test} field should contain a function of one argument, a ! Undefined control sequence. l.6147 condition, that returns \code {TRUE} if the restart applies to the ! Undefined control sequence. l.6148 condition and \code {FALSE} if it does not; the default function ! Undefined control sequence. l.6149 returns \code {TRUE} for all conditions. ! Undefined control sequence. l.6152 \code {interactive}. This should be a function of no arguments that ! Undefined control sequence. l.6155 function \code {invokeRestartInteractively} calls this function to ! Undefined control sequence. l.6157 \code {interactive} method queries the user for values for the ! Undefined control sequence. l.6160 \code {.signalSimpleWarning}, \code{.handleSimpleError}, and ! Undefined control sequence. l.6160 \code{.signalSimpleWarning}, \code {.handleSimpleError}, and ! Undefined control sequence. l.6161 \code {.tryResumeInterrupt} are used internally and should not be ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6163 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6165 \begin{References} \relax ! Undefined control sequence. l.6166 The \code {tryCatch} mechanism is similar to Java ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explana Overfull \hbox (46.15797pt too wide) in paragraph at lines 2231--2231 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2233--2233 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [25tion. Type H for immediate help. ... l.6169 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6171 \begin{SeeAlso} \relax ! Undefined control sequence. l.6172 \code {\LinkA{stop}{stop}} and \code{\LinkA{warning}{warning}} signal ... ! Undefined control sequence. l.6172 \code{\LinkA {stop}{stop}} and \code{\LinkA{warning}{warning}} signal ... ! Undefined control sequence. l.6172 \code{\LinkA{stop}{stop}} and \code {\LinkA{warning}{warning}} signal ... ! Undefined control sequence. l.6172 \code{\LinkA{stop}{stop}} and \code{\LinkA {warning}{warning}} signal ... ! Undefined control sequence. l.6173 and \code {\LinkA{try}{try}} is essentially a simplified version of ! Undefined control sequence. l.6173 and \code{\LinkA {try}{try}} is essentially a simplified version of ! Undefined control sequence. l.6174 \code {tryCatch}. ! Undefined control sequence. l.6175 \code {\LinkA{assertCondition}{assertCondition}} in package \pkg{tools... ! Undefined control sequence. l.6175 \code{\LinkA {assertCondition}{assertCondition}} in package \pkg{tools... ! Undefined control sequence. l.6175 ...ition}{assertCondition}} in package \pkg {tools} \emph{tests} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6178 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6180 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6181 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.6184 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.6184 ## Not run: ! You can't use `macro parameter character #' in vertical mode. l.6189 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6189 ## End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.6193 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.6193 ## Not run: Underfull \hbox (badness 4673) in paragraph at lines 6189--6195 []\OT1/cmr/m/n/10 End(Not run) tryCatch(stop(e), er-ror = func-tion(e) e, fi-na lly = Underfull \hbox (badness 2894) in paragraph at lines 6189--6195 \OT1/cmr/m/n/10 print("Hello")) tryCatch(stop("fred"), er-ror = func-tion(e) e, fi-nally = ! You can't use `macro parameter character #' in vertical mode. l.6196 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6196 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6199 # #--> More examples are part of ! You can't use `macro parameter character #' in vertical mode. l.6199 ## --> More examples are part of ! You can't use `macro parameter character #' in horizontal mode. l.6200 # #--> demo(error.catching) ! You can']t use `macro parameter character #' in horizontal mode. l.6200 ## --> demo(error.catching) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6201 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6202 \end{Examples} ! Undefined control sequence. l.6203 \HeaderA {conflicts}{Search for Masked Objects on the Search Path}{con... ! Undefined control sequence. l.6204 \keyword {utilities}{conflicts} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6206 \begin{Description} \relax ! Undefined control sequence. l.6207 \code {conflicts} reports on objects that exist with the same name in ! Undefined control sequence. l.6208 two or more places on the \code {\LinkA{search}{search}} path, usually... ! Undefined control sequence. l.6208 two or more places on the \code{\LinkA {search}{search}} path, usually... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6211 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6213 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6217 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6219 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6220 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6221 \item[\code{where}] A subset of the search path, by default the whole... [61] [26 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6222 \item[\code{detail}] If \code{TRUE}, give the masked or masking funct... ! Undefined control sequence. l.6222 \item[\code{detail}] If \code {TRUE}, give the masked or masking funct... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6224 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6225 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6227 \begin{Value} ! Undefined control sequence. l.6228 If \code {detail = FALSE}, a character vector of masked objects. ! Undefined control sequence. l.6229 If \code {detail = TRUE}, a list of character vectors giving the maske... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6232 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6234 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6235 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.6238 # # gives something like ! You can't use `macro parameter character #' in horizontal mode. l.6238 ## gives something like ! You can't use `macro parameter character #' in horizontal mode. l.6239 # $.GlobalEnv ! You can't use `macro parameter character #' in math mode. l.6240 # [1] "lm" ! You can't use `macro parameter character #' in math mode. l.6241 # ! You can't use `macro parameter character #' in math mode. l.6242 # $package:base ! You can't use `macro parameter character #' in horizontal mode. l.6243 # [1] "lm" ! You can't use `macro parameter character #' in vertical mode. l.6245 # # Remove things from your "workspace" that mask others: ! You can't use `macro parameter character #' in vertical mode. l.6245 ## Remove things from your "workspace" that mask others: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6247 \end{ExampleCode} ! Missing $ inserted. $ l.6247 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.6248 \end{Examples} ! Undefined control sequence. l.6249 \HeaderA {connections}{Functions to Manipulate Connections (Files, URL... ! Undefined control sequence. l.6250 \aliasA {bzfile}{connections}{bzfile} ! Undefined control sequence. l.6251 \aliasA {clipboard}{connections}{clipboard} ! Undefined control sequence. l.6252 \aliasA {close}{connections}{close} ! Undefined control sequence. l.6253 \methaliasA {close.connection}{connections}{close.connection} ! Undefined control sequence. l.6254 \aliasA {connection}{connections}{connection} ! Undefined control sequence. l.6255 \aliasA {fifo}{connections}{fifo} ! Undefined control sequence. l.6256 \aliasA {file}{connections}{file} ! Undefined control sequence. l.6257 \aliasA {flush}{connections}{flush} ! Undefined control sequence. l.6258 \methaliasA {flush.connection}{connections}{flush.connection} ! Undefined control sequence. l.6259 \aliasA {gzfile}{connections}{gzfile} ! Undefined control sequence. l.6260 \aliasA {isIncomplete}{connections}{isIncomplete} ! Undefined control sequence. l.6261 \aliasA {isOpen}{connections}{isOpen} ! Undefined control sequence. l.6262 \aliasA {open}{connections}{open} ! Undefined control sequence. l.6263 \methaliasA {open.connection}{connections}{open.connection} ! Undefined control sequence. l.6264 \aliasA {pipe}{connections}{pipe} ! Undefined control sequence. l.6265 \aliasA {print.connection}{connections}{print.connection} ! Undefined control sequence. l.6266 \aliasA {socketConnection}{connections}{socketConnection} ! Undefined control sequence. l.6267 \aliasA {summary.connection}{connections}{summary.connection} ! Undefined control sequence. l.6268 \aliasA {unz}{connections}{unz} ! Undefined control sequence. l.6269 \aliasA {url}{connections}{url} ! Undefined control sequence. l.6270 \aliasA {xzfile}{connections}{xzfile} ! Undefined control sequence. l.6271 \keyword {file}{connections} ! Undefined control sequence. l.6272 \keyword {connection}{connections} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6274 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6278 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6280 \begin{Usage} Underfull \hbox (badness 8038) in paragraph at lines 6245--6281 []\OT1/cmr/m/n/10 Remove things from your "workspace" that mask oth-ers: re- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 move(list = con-flicts(detail = TRUE)$\OML/cmm/m/it/10 :GlobalE nv\OT1/cmr/m/n/10 )$ con-nec-tions-Func- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 tions to Ma-nip-u-late Con-nec-tions (Files, URLs, ...)con-nec- tions bz- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 file-con-nec-tions-bz-file clip-board-con-nec-tion-sclip-board closec-on-nec-tion- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 sclose close.connectionconnectionsclose.connection con-nec-tion -con-nec-tion- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 scon-nec-tion fi-fo-con-nec-tions-fifo file-con-nec-tions-file flush-con-nec-tions-flush Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 flush.connectionconnectionsflush.connection gz-file-con-nec-tio n-s-gz-file isIn- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 com-plete-con-nec-tion-sis-In-com-plete isOpen-con-nec-tion-sis Open open-con-nec- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 tion-sopen open.connectionconnectionsopen.connection pipecon-ne c-tion-spipe Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 print.connectionconnectionsprint.connection sock-et-Con-nec-tio n-con-nec-tion- Underfull \hbox (badness 10000) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 ssock-et-Con-nec-tion sum-mary.connectionconnectionssummary.con nection Underfull \hbox (badness 5622) in paragraph at lines 6245--6281 \OT1/cmr/m/n/10 un-z-con-nec-tion-sunz url-con-nec-tion-surl xz-file-con-nec-ti on-sxz-file file-con-nec-tions Overfull \hbox (27.74675pt too wide) in paragraph at lines 6323--6323 []\OT1/cmtt/m/n/10 unz(description, filename, open = "", encoding = getOption(" encoding"))[] [62 [27]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6324 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6326 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6327 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6328 \item[\code{description}] character string. A description of the con... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6330 \item[\code{open}] character string. A description of how to open th... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6333 \item[\code{blocking}] logical. See the `Blocking' section. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6334 \item[\code{encoding}] The name of the encoding to be assumed. See the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6336 \item[\code{raw}] logical. If true, a `raw' interface is used which ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6341 \item[\code{method}] character string, partially matched to ! Undefined control sequence. l.6342 \code {c("default", "internal", "wininet", "libcurl")}: ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6345 \item[\code{compression}] integer in 0--9. The amount of compression... ! Undefined control sequence. l.6347 \code {xzfile} can also be negative: see the `Compression' ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6349 \item[\code{timeout}] numeric: the timeout (in seconds) to be used fo... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6353 \item[\code{filename}] a filename within a zip file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6354 \item[\code{host}] character string. Host name for the port. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6355 \item[\code{port}] integer. The TCP port number. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6356 \item[\code{server}] logical. Should the socket be a client or a ser... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6357 \item[\code{con}] a connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6358 \item[\code{type}] character string. Currently ignored. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6359 \item[\code{rw}] character string. Empty or \code{"read"} or \code{"... ! Undefined control sequence. l.6359 ...e{rw}] character string. Empty or \code {"read"} or \code{"write"}, ! Undefined control sequence. l.6359 ...string. Empty or \code{"read"} or \code {"write"}, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6361 \item[\code{...}] arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6362 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6363 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6365 \begin{Details} \relax ! Undefined control sequence. l.6367 ...ection is not opened (except for a \code {socketConnection}), but may ! Undefined control sequence. l.6368 ...ting a non-empty value of argument \code {open}. ! Undefined control sequence. l.6370 For \code {file} the description is a path to the file to be opened or ! Undefined control sequence. l.6371 ...RL (when it is the same as calling \code {url}), or ! Undefined control sequence. l.6372 \code {""} (the default) or \code{"clipboard"} (see the ! Undefined control sequence. l.6372 \code{""} (the default) or \code {"clipboard"} (see the ! Undefined control sequence. l.6373 `Clipboard' section). Use \code {"stdin"} to refer to the ! Undefined control sequence. l.6375 ...g in a console or embedded version of \R {}, and is ! Undefined control sequence. l.6376 not in \code {RGui} on Windows). See also \code{\LinkA{stdin}{stdin}(... ! Undefined control sequence. l.6376 ...\code{RGui} on Windows). See also \code {\LinkA{stdin}{stdin}()} for ! Undefined control sequence. l.6376 ...Gui} on Windows). See also \code{\LinkA {stdin}{stdin}()} for ! Undefined control sequence. l.6377 ...ubtly different R-level concept of \code {stdin}. [63 Underfull \hbox (badness 10000) in paragraph at lines 2482--2484 [][][]@smallrm The changes are linked from [][]@smalltt https://isocpp.org/std/ standing-documents/ [28] ! Undefined control sequence. l.6379 For \code {url} the description is a complete URL including scheme ! Undefined control sequence. l.6380 (such as \samp {http://}, \samp{https://}, \samp{ftp://} or ! Undefined control sequence. l.6380 (such as \samp{http://}, \samp {https://}, \samp{ftp://} or ! Undefined control sequence. l.6380 ...s \samp{http://}, \samp{https://}, \samp {ftp://} or ! Undefined control sequence. l.6381 \samp {file://}). Method \code{"internal"} is that available since ! Undefined control sequence. l.6381 \samp{file://}). Method \code {"internal"} is that available since ! Undefined control sequence. l.6382 connections were introduced, method \code {"wininet"} is only available ! Undefined control sequence. l.6384 \code {"libcurl"} (using the library of that name: ! Undefined control sequence. l.6385 \url {http://curl.haxx.se/libcurl/}) is required on a Unix-alike but ! Undefined control sequence. l.6386 optional on Windows. Method \code {"default"} uses method ! Undefined control sequence. l.6387 \code {"internal"} for \samp{file:} URLs and \code{"libcurl"} for ! Undefined control sequence. l.6387 \code{"internal"} for \samp {file:} URLs and \code{"libcurl"} for ! Undefined control sequence. l.6387 ...ternal"} for \samp{file:} URLs and \code {"libcurl"} for ! Undefined control sequence. l.6388 \code {ftps:} URLs. On a Unix-alike it uses \code{"libcurl"} for ! Undefined control sequence. l.6388 ...s:} URLs. On a Unix-alike it uses \code {"libcurl"} for ! Undefined control sequence. l.6389 \samp {http:}, \samp{https:} and \samp{ftp:} URLs; on Windows ! Undefined control sequence. l.6389 \samp{http:}, \samp {https:} and \samp{ftp:} URLs; on Windows ! Undefined control sequence. l.6389 \samp{http:}, \samp{https:} and \samp {ftp:} URLs; on Windows ! Undefined control sequence. l.6390 \code {"wininet"} for \samp{http:}, \samp{ftp:} and \samp{https:} URLs. ! Undefined control sequence. l.6390 \code{"wininet"} for \samp {http:}, \samp{ftp:} and \samp{https:} URLs. ! Undefined control sequence. l.6390 \code{"wininet"} for \samp{http:}, \samp {ftp:} and \samp{https:} URLs. ! Undefined control sequence. l.6390 ... for \samp{http:}, \samp{ftp:} and \samp {https:} URLs. ! Undefined control sequence. l.6391 Proxies can be specified: see \code {\LinkA{download.file}{download.fi... ! Undefined control sequence. l.6391 Proxies can be specified: see \code{\LinkA {download.file}{download.fi... ! Undefined control sequence. l.6393 For \code {gzfile} the description is the path to a file compressed by ! Undefined control sequence. l.6394 \command {gzip}: it can also open for reading uncompressed files and ! Undefined control sequence. l.6395 those compressed by \command {bzip2}, \command{xz} or \command{lzma}. ! Undefined control sequence. l.6395 ... compressed by \command{bzip2}, \command {xz} or \command{lzma}. ! Undefined control sequence. l.6395 ...command{bzip2}, \command{xz} or \command {lzma}. ! Undefined control sequence. l.6397 For \code {bzfile} the description is the path to a file compressed by ! Undefined control sequence. l.6398 \command {bzip2}. ! Undefined con]trol sequence. l.6400 For \code {xzfile} the description is the path to a file compressed by ! Undefined control sequence. l.6401 \command {xz} (\url{https://en.wikipedia.org/wiki/Xz}) or (for reading ! Undefined control sequence. l.6401 \command{xz} (\url {https://en.wikipedia.org/wiki/Xz}) or (for reading ! Undefined control sequence. l.6402 only) \command {lzma} (\url{https://en.wikipedia.org/wiki/LZMA}). ! Undefined control sequence. l.6402 only) \command{lzma} (\url {https://en.wikipedia.org/wiki/LZMA}). Underfull \hbox (badness 4886) in paragraph at lines 6400--6403 []\OT1/cmr/m/n/10 For xz-file the de-scrip-tion is the path to a file com-press ed by Underfull \hbox (badness 10000) in paragraph at lines 6400--6403 \OT1/cmr/m/n/10 xz (https://en.wikipedia.org/wiki/Xz) or (for read-ing only) lz ma ! Undefined control sequence. l.6404 \code {unz} reads (only) single files within zip files, in binary mode. ! Undefined control sequence. l.6405 ...he full path to the zip file, with \file {.zip} ! Undefined control sequence. l.6408 For \code {pipe} the description is the command line to be piped to or ! Undefined control sequence. l.6410 \env {COMSPEC} environment variable. ! Undefined control sequence. l.6412 For \code {fifo} the description is the path of the fifo. (Support for ! Undefined control sequence. l.6413 \code {fifo} connections is optional but they are available on most ! Undefined control sequence. l.6416 The intention is that \code {file} and \code{gzfile} can be used ! Undefined control sequence. l.6416 The intention is that \code{file} and \code {gzfile} can be used ! Undefined control sequence. l.6417 generally for text input (from files, \samp {http://} and ! Undefined control sequence. l.6418 \samp {https://} URLs) and binary input respectively. ! Undefined control sequence. l.6420 \code {open}, \code{close} and \code{seek} are generic functions: the ! Undefined control sequence. l.6420 \code{open}, \code {close} and \code{seek} are generic functions: the ! Undefined control sequence. l.6420 \code{open}, \code{close} and \code {seek} are generic functions: the ! Undefined control sequence. l.6423 \code {open} opens a connection. In general functions using ! Undefined control sequence. l.6425 ...so to leave a connection open call \code {open} explicitly. ! Undefined control sequence. l.6427 \code {close} closes and destroys a connection. This will happen ! Undefined control sequence. l.6429 \R {} object referring to the connection. ! Undefined control sequence. l.6433 \code {\LinkA{stdout}{stdout}}). The OS will impose limits on the nu... ! Undefined control sequence. l.6433 \code{\LinkA {stdout}{stdout}}). The OS will impose limits on the nu... ! Undefined control sequence. l.6436 \code {flush} flushes the output stream of a connection open for ! Undefined control sequence. l.6438 connections, \code {\LinkA{stdout}{stdout}} and \code{\LinkA{stderr}{s... ! Undefined control sequence. l.6438 connections, \code{\LinkA {stdout}{stdout}} and \code{\LinkA{stderr}{s... ! Undefined control sequence. l.6438 ... \code{\LinkA{stdout}{stdout}} and \code {\LinkA{stderr}{stderr}}). ! Undefined control sequence. l.6438 ...\LinkA{stdout}{stdout}} and \code{\LinkA {stderr}{stderr}}). ! Undefined control sequence. l.6440 If for a \code {file} or (on most platforms) a \code{fifo} connection ! Undefined control sequence. l.6440 ...ode{file} or (on most platforms) a \code {fifo} connection ! Undefined control sequence. l.6441 the description is \code {""}, the file/fifo is immediately opened (in ! Undefined control sequence. l.6442 \code {"w+"} mode unless \code{open = "w+b"} is specified) and unlinked ! Undefined control sequence. l.6442 \code{"w+"} mode unless \code {open = "w+b"} is specified) and unlinked ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6445 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6447 \begin{Value} ! Undefined control sequence. l.6448 \code {file}, \code{pipe}, \code{fifo}, \code{url}, \code{gzfile}, ! Undefined control sequence. l.6448 \code{file}, \code {pipe}, \code{fifo}, \code{url}, \code{gzfile}, ! Undefined control sequence. l.6448 \code{file}, \code{pipe}, \code {fifo}, \code{url}, \code{gzfile}, ! Undefined control sequence. l.6448 ...e{file}, \code{pipe}, \code{fifo}, \code {url}, \code{gzfile}, ! Undefined control sequence. l.6448 ...de{pipe}, \code{fifo}, \code{url}, \code {gzfile}, ! Undefined control sequence. l.6449 \code {bzfile}, \code{xzfile}, \code{unz} and \code{socketConnection} ! Undefined control sequence. l.6449 \code{bzfile}, \code {xzfile}, \code{unz} and \code{socketConnection} ! Undefined control sequence. l.6449 \code{bzfile}, \code{xzfile}, \code {unz} and \code{socketConnection} ! Undefined control sequence. l.6449 ...le}, \code{xzfile}, \code{unz} and \code {socketConnection} ! Undefined control sequence. l.6451 \code {"connection"} and has a first more specific class. ! Undefined control sequence. l.6453 \code {open} and \code{flush} return \code{NULL}, invisibly. ! Undefined control sequence. l.6453 \code{open} and \code {flush} return \code{NULL}, invisibly. ! Undefined control sequence. l.6453 \code{open} and \code{flush} return \code {NULL}, invisibly. ! Undefined control sequence. l.6455 \code {close} returns either \code{NULL} or an integer status, ! Undefined control sequence. l.6455 \code{close} returns either \code {NULL} or an integer status, [64 [29] ! Undefined control sequence. l.6462 \code {isOpen} returns a logical value, whether the connection is ! Undefined control sequence. l.6465 \code {isIncomplete} returns a logical value, whether the last read ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6468 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6470 \begin{Section} {URLs} ! Undefined control sequence. l.6471 \code {url} and \code{file} support URL schemes \samp{file://}, ! Undefined control sequence. l.6471 \code{url} and \code {file} support URL schemes \samp{file://}, ! Undefined control sequence. l.6471 ...nd \code{file} support URL schemes \samp {file://}, ! Undefined control sequence. l.6472 \samp {http://}, \samp{https://} and \samp{ftp://}. ! Undefined control sequence. l.6472 \samp{http://}, \samp {https://} and \samp{ftp://}. ! Undefined control sequence. l.6472 \samp{http://}, \samp{https://} and \samp {ftp://}. ! Undefined control sequence. l.6474 \code {method = "libcurl"} allows more schemes: exactly which schemes ! Undefined control sequence. l.6475 is platform-dependent (see \code {\LinkA{libcurlVersion}{libcurlVersio... ! Undefined control sequence. l.6475 is platform-dependent (see \code{\LinkA {libcurlVersion}{libcurlVersio... ! Undefined control sequence. l.6476 Unix-alike platforms will support \samp {https://} and most platforms ! Undefined control sequence. l.6477 will support \samp {ftps://}. ! Undefined control sequence. l.6480 in \samp {http://} URLs (see \code{\LinkA{URLencode}{URLencode}}), but... ! Undefined control sequence. l.6480 in \samp{http://} URLs (see \code {\LinkA{URLencode}{URLencode}}), but... ! Undefined control sequence. l.6480 in \samp{http://} URLs (see \code{\LinkA {URLencode}{URLencode}}), but... ! Undefined control sequence. l.6481 \code {"wininet"} method does. ! Undefined control sequence. l.6483 A note on \samp {file://} URLs. The most general form (from RFC1738) is ! Undefined control sequence. l.6484 \samp {file://host/path/to/file}, but \R{} only accepts the form with an ! Undefined control sequence. l.6484 \samp{file://host/path/to/file}, but \R {} only accepts the form with an ! Undefined control sequence. l.6485 empty \code {host} field referring to the local machine. ! Undefined control sequence. l.6487 On a Unix-alike, this is then \samp {file:///path/to/file}, where ! Undefined control sequence. l.6488 \samp {path/to/file} is relative to \file{/}. So although the third ! Undefined control sequence. l.6488 \samp{path/to/file} is relative to \file {/}. So although the third ! Undefined control sequence. l.6490 ...arded as a way to specify the file \file {/path/to/file}. It ! Undefined control sequence. l.6495 \samp {file:///d:/R/repos}: for compatibility with earlier versions of ! Undefined control sequence. l.6496 \R {} and Unix versions, any other form is parsed as \R{} as \samp{fil... ! Undefined con]trol sequence. l.6496 ...versions, any other form is parsed as \R {} as \samp{file://} ! Undefined control sequence. l.6496 ...ny other form is parsed as \R{} as \samp {file://} ! Undefined control sequence. l.6497 plus \code {path\_to\_file}. Also, backslashes are accepted within the ! Undefined control sequence. l.6500 ...s made to decode a percent-encoded \samp {file:} URL: call ! Undefined control sequence. l.6501 \code {\LinkA{URLdecode}{URLdecode}} if necessary. ! Undefined control sequence. l.6501 \code{\LinkA {URLdecode}{URLdecode}} if necessary. ! Undefined control sequence. l.6504 \code {"internal"} method is unable to follow redirections to HTTPS URLs. ! Undefined control sequence. l.6508 Function \code {\LinkA{download.file}{download.file}} and several cont... ! Undefined control sequence. l.6508 Function \code{\LinkA {download.file}{download.file}} and several cont... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6510 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6512 \begin{Section} {Modes} ! Undefined control sequence. l.6513 Possible values for the argument \code {open} are ! Undefined control sequence. \code {"r"} or \code {"rt"} l.6516 \item[\code{"r"} or \code{"rt"}] Open for reading in text mode. ! Undefined control sequence. \code {"r"} or \code {"rt"} l.6516 \item[\code{"r"} or \code{"rt"}] Open for reading in text mode. ! Undefined control sequence. \code {"w"} or \code {"wt"} l.6517 \item[\code{"w"} or \code{"wt"}] Open for writing in text mode. ! Undefined control sequence. \code {"w"} or \code {"wt"} l.6517 \item[\code{"w"} or \code{"wt"}] Open for writing in text mode. ! Undefined control sequence. \code {"a"} or \code {"at"} l.6518 \item[\code{"a"} or \code{"at"}] Open for appending in text mode. ! Undefined control sequence. \code {"a"} or \code {"at"} l.6518 \item[\code{"a"} or \code{"at"}] Open for appending in text mode. ! Undefined control sequence. \code {"rb"} l.6519 \item[\code{"rb"}] Open for reading in binary mode. ! Undefined control sequence. \code {"wb"} l.6520 \item[\code{"wb"}] Open for writing in binary mode. ! Undefined control sequence. \code {"ab"} l.6521 \item[\code{"ab"}] Open for appending in binary mode. ! Undefined control sequence. \code {"r+"}, \code {"r+b"} l.6522 \item[\code{"r+"}, \code{"r+b"}] Open for reading and writing. ! Undefined control sequence. \code {"r+"}, \code {"r+b"} l.6522 \item[\code{"r+"}, \code{"r+b"}] Open for reading and writing. ! Undefined control sequence. \code {"w+"}, \code {"w+b"} l.6523 \item[\code{"w+"}, \code{"w+b"}] Open for reading and writing, ! Undefined control sequence. \code {"w+"}, \code {"w+b"} l.6523 \item[\code{"w+"}, \code{"w+b"}] Open for reading and writing, ! Undefined control sequence. \code {"a+"}, \code {"a+b"} l.6525 \item[\code{"a+"}, \code{"a+b"}] Open for reading and appending. ! Undefined control sequence. \code {"a+"}, \code {"a+b"} l.6525 \item[\code{"a+"}, \code{"a+b"}] Open for reading and appending. ! Undefined control sequence. l.6535 ... allowed by the current setting of \code {umask} (see ! Undefined control sequence. l.6536 \code {\LinkA{Sys.umask}{Sys.umask}}). ! Undefined control sequence. l.6536 \code{\LinkA {Sys.umask}{Sys.umask}}). [65 Overfull \hbox (39.30717pt too wide) in paragraph at lines 2605--2605 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] [30] ! Undefined control sequence. l.6541 ... operations on connections such as \code {\LinkA{readLines}{readLin... ! Undefined control sequence. l.6541 ...ions on connections such as \code{\LinkA {readLines}{readLines}}, ! Undefined control sequence. l.6542 \code {\LinkA{scan}{scan}} and \code{\LinkA{source}{source}} work for ... ! Undefined control sequence. l.6542 \code{\LinkA {scan}{scan}} and \code{\LinkA{source}{source}} work for ... ! Undefined control sequence. l.6542 \code{\LinkA{scan}{scan}} and \code {\LinkA{source}{source}} work for ... ! Undefined control sequence. l.6542 \code{\LinkA{scan}{scan}} and \code{\LinkA {source}{source}} work for ... ! Undefined control sequence. l.6543 ending). Various \R {} operations are possible in only one of the modes: ! Undefined control sequence. l.6544 for example \code {\LinkA{pushBack}{pushBack}} is text-oriented and is... ! Undefined control sequence. l.6544 for example \code{\LinkA {pushBack}{pushBack}} is text-oriented and is... ! Undefined control sequence. l.6546 operations such as \code {\LinkA{readBin}{readBin}}, \code{\LinkA{load... ! Undefined control sequence. l.6546 operations such as \code{\LinkA {readBin}{readBin}}, \code{\LinkA{load... ! Undefined control sequence. l.6546 ...s \code{\LinkA{readBin}{readBin}}, \code {\LinkA{load}{load}} and ! Undefined control sequence. l.6546 ...{\LinkA{readBin}{readBin}}, \code{\LinkA {load}{load}} and ! Undefined control sequence. l.6547 \code {\LinkA{save}{save}} can only be done on binary-mode connections. ! Undefined control sequence. l.6547 \code{\LinkA {save}{save}} can only be done on binary-mode connections. ! Undefined control sequence. l.6550 deferred if \code {open = ""} is given (the default for all but socket ! Undefined control sequence. l.6551 connections). An explicit call to \code {open} can specify the mode, ! Undefined control sequence. l.6552 but otherwise the mode will be \code {"r"}. (\code{gzfile}, ! Undefined control sequence. l.6552 ...ise the mode will be \code{"r"}. (\code {gzfile}, ! Undefined control sequence. l.6553 \code {bzfile} and \code{xzfile} connections are exceptions, as the ! Undefined control sequence. l.6553 \code{bzfile} and \code {xzfile} connections are exceptions, as the ! Undefined control sequence. l.6556 mode is interpreted as \code {"rb"}.) Most operations that need write ! Undefined control sequence. l.6561 connections. They do \strong {not} produce a single compressed stream ! Undefined control sequence. l.6564 \R {} does so for \code{gzfile}, \code{bzfile} and \code{xzfile} ! Undefined control sequence. l.6564 \R{} does so for \code {gzfile}, \code{bzfile} and \code{xzfile} ! Undefined control sequence. l.6564 \R{} does so for \code{gzfile}, \code {bzfile} and \code{xzfile} ! Undefined control sequence. l.6564 ...r \code{gzfile}, \code{bzfile} and \code {xzfile} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6566 \end{Section} ! LaTeX E]rror: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6568 \begin{Section} {Compression} ! Undefined control sequence. l.6569 \R {} supports \command{gzip}, \command{bzip2} and \command{xz} ! Undefined control sequence. l.6569 \R{} supports \command {gzip}, \command{bzip2} and \command{xz} ! Undefined control sequence. l.6569 \R{} supports \command{gzip}, \command {bzip2} and \command{xz} ! Undefined control sequence. l.6569 ...mand{gzip}, \command{bzip2} and \command {xz} ! Undefined control sequence. l.6570 ...ad-only support for its precursor, \code {lzma} ! Undefined control sequence. l.6574 ...t few bytes of the file. Thus for \code {file(raw = FALSE)} ! Undefined control sequence. l.6575 connections, if \code {open} is \code{""}, \code{"r"} or \code{"rt"} ! Undefined control sequence. l.6575 connections, if \code{open} is \code {""}, \code{"r"} or \code{"rt"} ! Undefined control sequence. l.6575 ...ions, if \code{open} is \code{""}, \code {"r"} or \code{"rt"} ! Undefined control sequence. l.6575 ...{open} is \code{""}, \code{"r"} or \code {"rt"} ! Undefined control sequence. l.6577 uncompressed files. (Using \code {"rb"} will allow compressed files to ! Undefined control sequence. l.6578 be read byte-by-byte.) Similarly, \code {gzfile} connections can read ! Undefined control sequence. l.6583 if \code {open} is unspecified and a file of that name exists. If the ! Undefined control sequence. l.6586 \code {open = "w"} when the connection is created or ! Undefined control sequence. l.6587 \code {\LinkA{unlink}{unlink}} the file before creating the connection.) ! Undefined control sequence. l.6587 \code{\LinkA {unlink}{unlink}} the file before creating the connection.) ! Undefined control sequence. l.6589 For write-mode connections, \code {compress} specifies how hard the ! Undefined control sequence. l.6592 \code {xzfile(compress = 9)}). For \code{xzfile} negative values of ! Undefined control sequence. l.6592 \code{xzfile(compress = 9)}). For \code {xzfile} negative values of ! Undefined control sequence. l.6593 \code {compress} correspond to adding the \command{xz} argument ! Undefined control sequence. l.6593 ...press} correspond to adding the \command {xz} argument ! Undefined control sequence. l.6594 \option {-e}: this takes more time (double?) to compress but may ! Undefined control sequence. l.6595 ... better compression. The default (\code {6}) has ! Undefined control sequence. l.6597 \code {xz} compression you are probably looking for high compression. ! Undefined control sequence. l.6599 ...compression involves tradeoffs: \command {gzip}, ! Undefined control sequence. l.6600 \command {bzip2} and \command{xz} are successively less widely supported, ! Undefined control sequence. l.6600 \command{bzip2} and \command {xz} are successively less widely supported, ! Undefined control sequence. l.6603 ...rend). Typical experience is that \code {bzip2} compression ! Undefined control sequence. l.6604 is 15\% better on text files than \code {gzip} compression, and ! Undefined control sequence. l.6605 \code {xz} with maximal compression 30\% better. The experience with ! Undefined control sequence. l.6606 \R {} \code{\LinkA{save}{save}} files is similar, but on some large \f... ! Undefined control sequence. l.6606 \R{} \code {\LinkA{save}{save}} files is similar, but on some large \f... ! Undefined control sequence. l.6606 \R{} \code{\LinkA {save}{save}} files is similar, but on some large \f... ! Undefined control sequence. l.6606 ...iles is similar, but on some large \file {.rda} ! Undefined control sequence. l.6607 files \code {xz} compression is much better than the other two. With ! Undefined control sequence. l.6608 ...ters decompression times even with \code {compress = 9} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6611 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6613 \begin{Section} {Encoding} ! Undefined control sequence. l.6616 \code {\LinkA{iconv}{iconv}}: see that help page for how to find out what ! Undefined control sequence. l.6616 \code{\LinkA {iconv}{iconv}}: see that help page for how to find out what ! Undefined control sequence. l.6618 \code {""} and \code{"native.enc"} both mean the `native' ! Undefined control sequence. l.6618 \code{""} and \code {"native.enc"} both mean the `native' [66 Underfull \hbox (badness 10000) in paragraph at lines 2653--2659 [][][][][]@smalltt See https://isocpp.org/std/standing-documents/sd-6-sg10-feat ure-test-recommendations[][][] @smallrm or [31] ! Undefined control sequence. l.6625 calls to \code {\LinkA{readLines}{readLines}} and \code{\LinkA{readCha... ! Undefined control sequence. l.6625 calls to \code{\LinkA {readLines}{readLines}} and \code{\LinkA{readCha... ! Undefined control sequence. l.6625 ...{\LinkA{readLines}{readLines}} and \code {\LinkA{readChar}{readChar... ! Undefined control sequence. l.6625 ...{readLines}{readLines}} and \code{\LinkA {readChar}{readChar}}) is ... ! Undefined control sequence. l.6628 The encodings \code {"UCS-2LE"} and \code{"UTF-16LE"} are treated ! Undefined control sequence. l.6628 The encodings \code{"UCS-2LE"} and \code {"UTF-16LE"} are treated ! Undefined control sequence. l.6631 \code {0xFEFF} then these are removed as some implementations of ! Undefined control sequence. l.6632 \code {\LinkA{iconv}{iconv}} do not accept BOMs. Note that whereas most ! Undefined control sequence. l.6632 \code{\LinkA {iconv}{iconv}} do not accept BOMs. Note that whereas most ! Undefined control sequence. l.6633 ...ns will handle BOMs using encoding \code {"UCS-2"} and ! Undefined control sequence. l.6635 \code {glibc}) will not. There is a subtle distinction between ! Undefined control sequence. l.6636 \code {"UTF-16"} and \code{"UCS-2"} (see ! Undefined control sequence. l.6636 \code{"UTF-16"} and \code {"UCS-2"} (see ! Undefined control sequence. l.6637 \url {https://en.wikipedia.org/wiki/UTF-16}: the use of characters in ! Undefined control sequence. l.6639 rare so \code {"UCS-2LE"} is an appropriate first choice (as it is more ! Undefined control sequence. l.6642 One caveat: \R {}'s implementation of \code{"UCS-2LE"} and similar for ! Undefined control sequence. l.6642 One caveat: \R{}'s implementation of \code {"UCS-2LE"} and similar for ! Undefined control sequence. l.6644 ...line endings. We recommend use of \code {UTF-8} instead. ! Undefined control sequence. l.6646 As from \R {} 3.0.0 the encoding \code{"UTF-8-BOM"} is accepted for ! Undefined control sequence. l.6646 As from \R{} 3.0.0 the encoding \code {"UTF-8-BOM"} is accepted for ! Undefined control sequence. l.6650 written explicitly, e.g.~by \code {writeChar("\bsl{}ufeff", con, eos ! Undefined control sequence. l.6650 ...xplicitly, e.g.~by \code{writeChar("\bsl {}ufeff", con, eos ! Undefined control sequence. l.6651 = NULL)} or \code {writeBin(as.raw(c(0xef, 0xbb, 0xbf)), binary\_con)} ! Undefined control sequence. l.6653 Encoding names \code {"utf8"}, \code{"mac"} and \code{"macroman"} are ! Undefined control sequence. l.6653 Encoding names \code{"utf8"}, \code {"mac"} and \code{"macroman"} are ! Undefined control sequence. l.6653 ...es \code{"utf8"}, \code{"mac"} and \code {"macroman"} are ! Undefined control sequence. l.6654 ...ble, and not supported on all current \R {} platforms. ! Undefined control sequence. l.6655 \code {"UTF-8"} is portable and \code{"macintosh"} is the official ! Undefined control sequence. l.6655 \code{"UTF-8"} is portable and \code {"macintosh"} is the official ! Undefined control sequence. l.6656 ...rted) name for `Mac Roman'. (As from \R {} ! Undefined control sequence. l.665]7 3.4.0, \R {} maps \code{"utf8"} to \code{"UTF-8"} internally.) ! Undefined control sequence. l.6657 3.4.0, \R{} maps \code {"utf8"} to \code{"UTF-8"} internally.) ! Undefined control sequence. l.6657 3.4.0, \R{} maps \code{"utf8"} to \code {"UTF-8"} internally.) ! Undefined control sequence. l.6667 \code {\LinkA{Sys.getlocale}{Sys.getlocale}("LC\_CTYPE")}, but not all... ! Undefined control sequence. l.6667 \code{\LinkA {Sys.getlocale}{Sys.getlocale}("LC\_CTYPE")}, but not all... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6668 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6670 \begin{Section} {Blocking} Underfull \hbox (badness 3884) in paragraph at lines 6666--6673 []\OT1/cmr/m/n/10 It may be pos-si-ble to de-duce the cur-rent na-tive en-cod-i ng from ! Undefined control sequence. l.6675 \R {} evaluator until the read/write is complete. In non-blocking mode, [67] [32 ! Undefined control sequence. l.6680 The function \code {\LinkA{readLines}{readLines}} behaves differently ... ! Undefined control sequence. l.6680 The function \code{\LinkA {readLines}{readLines}} behaves differently ... ! Undefined control sequence. l.6685 of GUI parts of \R {}. These do not always succeed, and the whole \R{} ! Undefined control sequence. l.6685 ... do not always succeed, and the whole \R {} ! Undefined control sequence. l.6689 timeout set by \code {options("timeout")}. Note that this is a timeout ! Undefined control sequence. l.6692 connection of that type -- \samp {http:}, \samp{ftp:} or socket -- was ! Undefined control sequence. l.6692 ...tion of that type -- \samp{http:}, \samp {ftp:} or socket -- was ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6694 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6696 \begin{Section} {Fifos} ! Undefined control sequence. l.6703 ...onnects both sides of the fifo to the \R {} process, ! Undefined control sequence. l.6704 and provides an similar facility to \code {file()}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6705 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6707 \begin{Section} {Clipboard} ! Undefined control sequence. l.6708 \code {file} can be used with \code{description = "clipboard"} ! Undefined control sequence. l.6708 \code{file} can be used with \code {description = "clipboard"} ! Undefined control sequence. l.6709 in mode \code {"r"} only. This reads the X11 primary selection (see ! Undefined control sequence. l.6710 \url {http://standards.freedesktop.org/clipboards-spec/clipboards-late... ! Undefined control sequence. l.6711 which can also be specified as \code {"X11\_primary"} and the secondary ! Undefined control sequence. l.6712 selection as \code {"X11\_secondary"}. On most systems the clipboard ! Undefined control sequence. l.6714 be specified as \code {"X11\_clipboard"}. Underfull \hbox (badness 1226) in paragraph at lines 6702--6715 \OT1/cmr/m/n/10 can also be spec-i-fied as "X11[]primary" and the sec-ondary se -lec-tion as ! Undefined control sequence. l.6720 able to do so via \command {xclip} ! Undefined control sequence. l.6721 (\url {http://sourceforge.net/projects/xclip/}) or \command{xsel} ! Undefined control sequence. l.6721 ...eforge.net/projects/xclip/}) or \command {xsel} ! Undefined control sequence. l.6722 (\url {http://www.vergenet.net/~conrad/software/xsel/}), for example by ! Undefined control sequence. l.6723 \code {pipe("xclip -i", "w")} for the primary selection. Underfull \hbox (badness 1521) in paragraph at lines 6719--6724 []\OT1/cmr/m/n/10 Unix users wish-ing to \OT1/cmr/m/it/10 write \OT1/cmr/m/n/10 to one of the X11 se-lec-tions may be Underfull \hbox (badness 2261) in paragraph at lines 6719--6724 \OT1/cmr/m/n/10 able to do so via xclip (http://sourceforge.net/projects/xclip/ ) or xsel ! Undefined control sequence. l.6725 macOS users can use \code {pipe("pbpaste")} and ! Undefined control sequence. l.6726 \code {pipe("pbcopy", "w")} to read from and write to that system's ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6728 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6730 \begin{Note} \relax ! Undefined control sequence. l.6731 \R {}'s connections are modelled on those in S version 4 (see Chambers, ! Undefined control sequence. l.6732 1998). However \R {} goes well beyond the S model, for example in output ! Undefined control sequence. l.6734 The default open mode in \R {} is \code{"r"} except for socket connect... ! Undefined control sequence. l.6734 The default open mode in \R{} is \code {"r"} except for socket connect... ! Undefined control sequence. l.6735 ...m S, where it is the equivalent of \code {"r+"}, ! Undefined control sequence. l.6736 known as \code {"*"}. ! Undefined control sequence. l.6738 On (rare) platforms where \code {vsnprintf} does not return the needed ! Undefined control sequence. l.6740 a line for text output on \code {fifo}, \code{gzfile}, \code{bzfile} and ! Undefined control sequence. l.6740 ...ne for text output on \code{fifo}, \code {gzfile}, \code{bzfile} and ! Undefined control sequence. l.6740 ...put on \code{fifo}, \code{gzfile}, \code {bzfile} and ! Undefined control sequence. l.6741 \code {xzfile} connections: longer lines will be truncated with a ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6743 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6745 \begin{References} \relax ! Undefined control sequence. l.6749 ...(2001) Connections. \emph{R News}, \bold {1/1}, 16--7. ! Undefined control sequence. l.6750 \url {https://www.r-project.org/doc/Rnews/Rnews_2001-1.pdf} ! Missing $ inserted. $ l.6750 ...tps://www.r-project.org/doc/Rnews/Rnews_ 2001-1.pdf} ! Extra }, or forgotten $. l.6750 ...-project.org/doc/Rnews/Rnews_2001-1.pdf} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6751 \end{References} ] ! Missing $ inserted. $ l.6751 \end{References} ! Missing } inserted. } l.6751 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6753 \begin{SeeAlso} \relax ! Undefined control sequence. l.6754 \code {\LinkA{textConnection}{textConnection}}, \code{\LinkA{seek}{see... ! Undefined control sequence. l.6754 \code{\LinkA {textConnection}{textConnection}}, \code{\LinkA{seek}{see... ! Undefined control sequence. l.6754 ...{textConnection}{textConnection}}, \code {\LinkA{seek}{seek}}, ! Undefined control sequence. l.6754 ...nnection}{textConnection}}, \code{\LinkA {seek}{seek}}, ! Undefined control sequence. l.6755 \code {\LinkA{showConnections}{showConnections}}, \code{\LinkA{pushBac... ! Undefined control sequence. l.6755 \code{\LinkA {showConnections}{showConnections}}, \code{\LinkA{pushBac... ! Undefined control sequence. l.6755 ...howConnections}{showConnections}}, \code {\LinkA{pushBack}{pushBack}}. ! Undefined control sequence. l.6755 ...ections}{showConnections}}, \code{\LinkA {pushBack}{pushBack}}. Underfull \hbox (badness 7433) in paragraph at lines 6749--6756 \OT1/cmr/m/n/10 project.org/doc/Rnews/Rnews$[]001 \OMS/cmsy/m/n/10 ^^@ \OT1/cmr /m/n/10 1\OML/cmm/m/it/10 :pdf$ \OT1/cmr/m/n/10 textCon-nec-tion-textCon-nec-ti on, ! Undefined control sequence. l.6758 \code {\LinkA{readLines}{readLines}}, \code{\LinkA{writeLines}{writeLi... ! Undefined control sequence. l.6758 \code{\LinkA {readLines}{readLines}}, \code{\LinkA{writeLines}{writeLi... ! Undefined control sequence. l.6758 \code{\LinkA{readLines}{readLines}}, \code {\LinkA{writeLines}{writeLi... ! Undefined control sequence. l.6758 ...nkA{readLines}{readLines}}, \code{\LinkA {writeLines}{writeLines}},... ! Undefined control sequence. l.6758 ...e{\LinkA{writeLines}{writeLines}}, \code {\LinkA{cat}{cat}}, ! Undefined control sequence. l.6758 ...A{writeLines}{writeLines}}, \code{\LinkA {cat}{cat}}, ! Undefined control sequence. l.6759 \code {\LinkA{sink}{sink}}, \code{\LinkA{scan}{scan}}, \code{\LinkA{pa... ! Undefined control sequence. l.6759 \code{\LinkA {sink}{sink}}, \code{\LinkA{scan}{scan}}, \code{\LinkA{pa... ! Undefined control sequence. l.6759 \code{\LinkA{sink}{sink}}, \code {\LinkA{scan}{scan}}, \code{\LinkA{pa... ! Undefined control sequence. l.6759 \code{\LinkA{sink}{sink}}, \code{\LinkA {scan}{scan}}, \code{\LinkA{pa... ! Undefined control sequence. l.6759 ...sink}}, \code{\LinkA{scan}{scan}}, \code {\LinkA{parse}{parse}}, ! Undefined control sequence. l.6759 ... \code{\LinkA{scan}{scan}}, \code{\LinkA {parse}{parse}}, ! Undefined control sequence. l.6760 \code {\LinkA{read.dcf}{read.dcf}}, \code{\LinkA{dput}{dput}}, \code{\... ! Undefined control sequence. l.6760 \code{\LinkA {read.dcf}{read.dcf}}, \code{\LinkA{dput}{dput}}, \code{\... ! Undefined control sequence. l.6760 \code{\LinkA{read.dcf}{read.dcf}}, \code {\LinkA{dput}{dput}}, \code{\... ! Undefined control sequence. l.6760 ...LinkA{read.dcf}{read.dcf}}, \code{\LinkA {dput}{dput}}, \code{\Link... ! Undefined control sequence. l.6760 ....dcf}}, \code{\LinkA{dput}{dput}}, \code {\LinkA{dump}{dump}} and ! Undefined control sequence. l.6760 ... \code{\LinkA{dput}{dput}}, \code{\LinkA {dump}{dump}} and ! Undefined control sequence. l.6761 (binary-mode) \code {\LinkA{readBin}{readBin}}, \code{\LinkA{readChar}... ! Undefined control sequence. l.6761 (binary-mode) \code{\LinkA {readBin}{readBin}}, \code{\LinkA{readChar}... ! Undefined control sequence. l.6761 ...) \code{\LinkA{readBin}{readBin}}, \code {\LinkA{readChar}{readChar}}, ! Undefined control sequence. l.6761 ...{\LinkA{readBin}{readBin}}, \code{\LinkA {readChar}{readChar}}, ! Undefined control sequence. l.6762 \code {\LinkA{writeBin}{writeBin}}, \code{\LinkA{writeChar}{writeChar}... ! Undefined control sequence. l.6762 \code{\LinkA {writeBin}{writeBin}}, \code{\LinkA{writeChar}{writeChar}... ! Undefined control sequence. l.6762 \code{\LinkA{writeBin}{writeBin}}, \code {\LinkA{writeChar}{writeChar}... ! Undefined control sequence. l.6762 ...LinkA{writeBin}{writeBin}}, \code{\LinkA {writeChar}{writeChar}}, \... ! Undefined control sequence. l.6762 ...ode{\LinkA{writeChar}{writeChar}}, \code {\LinkA{load}{load}} ! Undefined control sequence. l.6762 ...nkA{writeChar}{writeChar}}, \code{\LinkA {load}{load}} ! Undefined control sequence. l.6763 and \code {\LinkA{save}{save}}. ! Undefined control sequence. l.6763 and \code{\LinkA {save}{save}}. Underfull \hbox (badness 1721) in paragraph at lines 6757--6764 []\OT1/cmr/m/n/10 Functions mak-ing di-rect use of con-nec-tions are (text-mode ) read-Li- Underfull \hbox (badness 2376) in paragraph at lines 6757--6764 \OT1/cmr/m/n/10 read.dcfread.dcf, dput-d-put, dump-dump and (binary-mode) read- Bin-read- ! Undefined control sequence. l.6765 \code {\LinkA{capabilities}{capabilities}} to see if \code{fifo} conne... ! Undefined control sequence. l.6765 \code{\LinkA {capabilities}{capabilities}} to see if \code{fifo} conne... ! Undefined control sequence. l.6765 ...bilities}{capabilities}} to see if \code {fifo} connections are ! Undefined control sequence. l.6766 supported by this build of \R {}. ! Undefined control sequence. l.6768 \code {\LinkA{gzcon}{gzcon}} to wrap \command{gzip} (de)compression ar... ! Undefined control sequence. l.6768 \code{\LinkA {gzcon}{gzcon}} to wrap \command{gzip} (de)compression ar... ! Undefined control sequence. l.6768 ...e{\LinkA{gzcon}{gzcon}} to wrap \command {gzip} (de)compression aro... ! Undefined control sequence. l.6771 \code {\LinkA{options}{options}} \code{HTTPUserAgent}, \code{internet.... ! Undefined control sequence. l.6771 \code{\LinkA {options}{options}} \code{HTTPUserAgent}, \code{internet.... [68] [33 ! Undefined control sequence. l.6771 \code{\LinkA{options}{options}} \code {HTTPUserAgent}, \code{internet.... ! Undefined control sequence. l.6771 ...s}{options}} \code{HTTPUserAgent}, \code {internet.info} and ! Undefined control sequence. l.6772 \code {timeout} are used by some of the methods for URL connections. ! Undefined control sequence. l.6774 \code {\LinkA{memCompress}{memCompress}} for more ways to (de)compress... ! Undefined control sequence. l.6774 \code{\LinkA {memCompress}{memCompress}} for more ways to (de)compress... ! Undefined control sequence. l.6777 \code {\LinkA{extSoftVersion}{extSoftVersion}} for the versions of the... ! Undefined control sequence. l.6777 \code{\LinkA {extSoftVersion}{extSoftVersion}} for the versions of the... ! Undefined control sequence. l.6777 ...tVersion}} for the versions of the \code {zlib} (for ! Undefined control sequence. l.6778 \code {gzfile}), \code{bzip2} and \code{xz} libraries in use. ! Undefined control sequence. l.6778 \code{gzfile}), \code {bzip2} and \code{xz} libraries in use. ! Undefined control sequence. l.6778 \code{gzfile}), \code{bzip2} and \code {xz} libraries in use. ! Undefined control sequence. l.6781 \code {\LinkA{flush.console}{flush.console}}. ! Undefined control sequence. l.6781 \code{\LinkA {flush.console}{flush.console}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6782 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6784 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6785 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.6786 zz <- file("ex.data", "w") # open an output file connection ! Undefined control sequence. l.6787 ...7", "", "11 13 17", file = zz, sep = "\n ") ! Undefined control sequence. l.6788 cat("One more line\n ", file = zz) Underfull \hbox (badness 10000) in paragraph at lines 6780--6792 []\OT1/cmr/m/n/10 To flush out-put to the Win-dows and maOS con-soles, see ! You can't use `macro parameter character #' in horizontal mode. l.6793 zz <- gzfile("ex.gz", "w") # compressed file ! Undefined control sequence. l.6794 ...7", "", "11 13 17", file = zz, sep = "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.6799 zz # an invalid connection ! You can't use `macro parameter character #' in horizontal mode. l.6801 zz <- bzfile("ex.bz2", "w") # bzip2-ed file ! Undefined control sequence. l.6802 ...7", "", "11 13 17", file = zz, sep = "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.6804 zz # print() method: invalid connection ! You can't use `macro parameter character #' in vertical mode. l.6809 # # An example of a file open for reading and writing ! You can't use `macro parameter character #' in vertical mode. l.6809 ## An example of a file open for reading and writing ! You can't use `macro parameter character #' in horizontal mode. l.6811 c(isOpen(Tfile, "r"), isOpen(Tfile, "w")) # both TRUE ! Undefined control sequence. l.6812 cat("abc\ndef \n", file = Tfile) ! Undefined control sequence. l.6812 cat("abc\ndef\n ", file = Tfile) ! You can't use `macro parameter character #' in horizontal mode. l.6814 seek(Tfile, 0, rw = "r") # reset to beginning ! Undefined control sequence. l.6816 cat("ghi\n ", file = Tfile) ! You can't use `macro parameter character #' in horizontal mode. l.6818 Tfile # -> print() : "valid" connection ! You can't use `macro parameter character #' in horizontal mode. l.6820 Tfile # -> print() : "invalid" connection ! You can't use `macro parameter character #' in vertical mode. l.6823 # # We can do the same thing with an anonymous file. ! You can't use `macro parameter character #' in vertical mode. l.6823 ## We can do the same thing with an anonymous file. ! Undefined control sequence. l.6825 cat("abc\ndef \n", file = Tfile) ! Undefined control sequence. l.6825 cat("abc\ndef\n ", file = Tfile) ! You can't use `macro parameter character #' in vertical mode. l.6829 # # Not run: ## fifo example -- may hang even with OS support for fifos ! You can't use `macro parameter character #' in vertical mode. l.6829 ## Not run: ## fifo example -- may hang even with OS support for fifos ! You can't use `macro parameter character #' in horizontal mode. l.6829 ## Not run: # # fifo example -- may hang even with OS support for fifos ! You can't use `macro parameter character #' in horizontal mode. l.6829 ## Not run: ## fifo example -- may hang even with OS support for fifos ! You can't use `macro parameter character #' in horizontal mode. l.6837 # # End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.6837 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6839 # # Unix examples of use of pipes ! You can't use `macro parameter character #' in vertical mode. l.6839 ## Unix examples of use of pipes ! You can't use `macro parameter character #' in vertical mode. l.6841 # read listing of current directory ! You can't use `macro parameter character #' in vertical mode. l.6844 # remove trailing commas. Suppose ! You can't use `macro parameter character #' in vertical mode. l.6846 # # Not run: % cat data2_ ! You can't use `macro parameter character #' in vertical mode. l.6846 ## Not run: % cat data2_ ! You can't use `macro parameter character #' in horizontal mode. l.6850 # # End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.6850 ## End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.6851 # Then read this by ! Missing $ inserted. $ l.6853 ! You can't use `macro parameter character #' in vertical mode. l.6855 # convert decimal point to comma in output: see also write.table ! You can't use `macro parameter character #' in horizontal mode. l.6856 # both R strings and (probably) the shell need \ doubled Underfull \hbox (badness 10000) in paragraph at lines 6855--6861 ! You can't use `macro parameter character #' in vertical mode. l.6862 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.6862 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.6863 # # example for a machine running a finger daemon ! You can't use `macro parameter character #' in horizontal mode. l.6863 ## example for a machine running a finger daemon ! Missing $ inserted. $ l.6869 Underfull \hbox (badness 10000) in paragraph at lines 6865--6869 []\OT1/cmr/m/n/10 con <- sock-et-Con-nec-tion(port = 79, block-ing = TRUE) writ e- Underfull \hbox (badness 10000) in paragraph at lines 6865--6869 \OT1/cmr/m/n/10 Lines(paste0(system("whoami", in-tern = TRUE), "[]"), con) gsub (" ! You can't use `macro parameter character #' in vertical mode. l.6870 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6870 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6872 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.6872 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.6873 # # Two R processes communicating via non-blocking sockets ! You can't use `macro parameter character #' in horizontal mode. l.6873 ## Two R processes communicating via non-blocking sockets ! You can't use `macro parameter character #' in horizontal mode. l.6874 # R process 1 ! You can't use `macro parameter character #' in vertical mode. l.6879 # R process 2 ! You can't use `macro parameter character #' in horizontal mode. l.6881 # as non-blocking, may need to loop for input Underfull \hbox (badness 2418) in paragraph at lines 6879--6889 \OT1/cmr/m/n/10 6011) as non-blocking, may need to loop for in-put read-Lines( con2) Underfull \hbox (badness 1990) in paragraph at lines 6879--6889 \OT1/cmr/m/n/10 while(isIncomplete(con2)) Sys.sleep(1) z <- read-Lines(con2) i f(length(z)) [69]] ! You can't use `macro parameter character #' in vertical mode. l.6890 # # examples of use of encodings ! You can't use `macro parameter character #' in vertical mode. l.6890 ## examples of use of encodings ! You can't use `macro parameter character #' in horizontal mode. l.6891 # write a file in UTF-8 ! You can't use `macro parameter character #' in horizontal mode. l.6893 # read a 'Windows Unicode' file ! You can't use `macro parameter character #' in vertical mode. l.6896 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.6896 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6897 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6898 \end{Examples} ! Undefined control sequence. l.6899 \HeaderA {Constants}{Built-in Constants}{Constants} ! Undefined control sequence. l.6900 \aliasA {LETTERS}{Constants}{LETTERS} ! Undefined control sequence. l.6901 \aliasA {letters}{Constants}{letters} ! Undefined control sequence. l.6902 \aliasA {month.abb}{Constants}{month.abb} ! Undefined control sequence. l.6903 \aliasA {month.name}{Constants}{month.name} ! Undefined control sequence. l.6904 \aliasA {pi}{Constants}{pi} ! Undefined control sequence. l.6905 \keyword {sysdata}{Constants} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6907 \begin{Description} \relax ! Undefined control sequence. l.6908 Constants built into \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6909 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6911 \begin{Usage} Underfull \hbox (badness 7925) in paragraph at lines 6896--6912 []\OT1/cmr/m/n/10 End(Not run) ConstantsBuilt-in Con-stantsCon-stants LET-TER - ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6919 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6921 \begin{Details} \relax ! Undefined control sequence. l.6922 \R {} has a small number of built-in constants. ! Undefined control sequence. \code l.6927 \item \code {LETTERS}: the 26 upper-case letters of the Roman ! Undefined control sequence. \code l.6929 \item \code {letters}: the 26 lower-case letters of the Roman ! Undefined control sequence. \code l.6931 \item \code {month.abb}: the three-letter abbreviations for the ! Undefined control sequence. \code l.6933 \item \code {month.name}: the English names for the months of the ! Undefined control sequence. \code l.6935 \item \code {pi}: the ratio of the circumference of a circle to its ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6943 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6945 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6949 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6951 \begin{SeeAlso} \relax ! Undefined control sequence. l.6952 \code {\LinkA{data}{data}}, \code{\LinkA{DateTimeClasses}{DateTimeClas... ! Undefined control sequence. l.6952 \code{\LinkA {data}{data}}, \code{\LinkA{DateTimeClasses}{DateTimeClas... ! Undefined control sequence. l.6952 \code{\LinkA{data}{data}}, \code {\LinkA{DateTimeClasses}{DateTimeClas... ! Undefined control sequence. l.6952 \code{\LinkA{data}{data}}, \code{\LinkA {DateTimeClasses}{DateTimeClas... ! Undefined control sequence. l.6954 \code {\LinkA{Quotes}{Quotes}} for the parsing of character constants, ! Undefined control sequence. l.6954 \code{\LinkA {Quotes}{Quotes}} for the parsing of character constants, ! Undefined control sequence. l.6955 \code {\LinkA{NumericConstants}{NumericConstants}} for numeric constants. ! Undefined control sequence. l.6955 \code{\LinkA {NumericConstants}{NumericConstants}} for numeric constants. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6956 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6958 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6959 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.6961 # # John Machin (ca 1706) computed pi to over 100 decimal places ! You can't use `macro parameter character #' in vertical mode. l.6961 ## John Machin (ca 1706) computed pi to over 100 decimal places ! You can't use `macro parameter character #' in horizontal mode. l.6962 # # using the Taylor series expansion of the second term of ! You can't use `macro parameter character #' in horizontal mode. l.6962 ## using the Taylor series expansion of the second term of ! You can't use `macro parameter character #' in vertical mode. l.6965 # # months in English ! You can't use `macro parameter character #' in vertical mode. l.6965 ## months in English ! You can't use `macro parameter character #' in horizontal mode. l.6967 # # months in your current locale ! You can't use `macro parameter character #' in horizontal mode. l.6967 ## months in your current locale ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6970 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6971 \end{Examples} ! Undefined control sequence. l.6972 \HeaderA {contributors}{R Project Contributors}{contributors} ! Undefined control sequence. l.6973 \keyword {misc}{contributors} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6975 \begin{Description} \relax ! Undefined control sequence. l.6976 The \R {} Who-is-who, describing who made significant contributions to ! Undefined control sequence. l.6977 the development of \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6978 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6980 \begin{Usage} Underfull \hbox (badness 1226) in paragraph at lines 6965--6981 []\OT1/cmr/m/n/10 months in En-glish month.name months in your cur-rent lo-cal e for- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.6984 \end{Usage} ! Undefined control sequence. l.6985 \HeaderA {Control}{Control Flow}{Control} ! Undefined control sequence. l.6986 \aliasA {break}{Control}{break} ! Undefined control sequence. l.6987 \aliasA {else}{Control}{else} ! Undefined control sequence. l.6988 \aliasA {for}{Control}{for} ! Undefined control sequence. l.6989 \aliasA {if}{Control}{if} ! Undefined control sequence. l.6990 \aliasA {in}{Control}{in} ! Undefined control sequence. l.6991 \aliasA {next}{Control}{next} ! Undefined control sequence. l.6992 \aliasA {repeat}{Control}{repeat} ! Undefined control sequence. l.6993 \aliasA {while}{Control}{while} ! Undefined control sequence. l.6994 \keyword {programming}{Control} ! Undefined control sequence. l.6995 \keyword {iteration}{Control} ! Undefined control sequence. l.6996 \keyword {logic}{Control} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [34 l.6998 \begin{Description} \relax ! Undefined control sequence. l.6999 ... basic control-flow constructs of the \R {} language. They ! Undefined control sequence. l.7001 language. They are all \LinkA {reserved}{reserved} words. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7002 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7004 \begin{Usage} [70]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7015 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7017 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7018 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7019 \item[\code{cond}] A length-one logical vector that is not \code{NA}. ! Undefined control sequence. l.7019 ...gth-one logical vector that is not \code {NA}. ! Undefined control sequence. l.7022 instead when the environment variable \env {\_R\_CHECK\_LENGTH\_1\_CON... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7026 \item[\code{var}] A syntactical name for a variable. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7027 \item[\code{seq}] An expression evaluating to a vector (including a l... ! Undefined control sequence. l.7028 an \LinkA {expression}{expression}) or to a \LinkA{pairlist}{pairlist}... ! Undefined control sequence. l.7028 ...{expression}{expression}) or to a \LinkA {pairlist}{pairlist} or \c... ! Undefined control sequence. l.7028 ...to a \LinkA{pairlist}{pairlist} or \code {NULL}. A ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7030 \item[\code{expr, cons.expr, alt.expr}] ! Undefined control sequence. l.7033 of the form \code {\{ expr1 ; expr2 \}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7035 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7036 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7038 \begin{Details} \relax ! Undefined control sequence. l.7039 \code {break} breaks out of a \code{for}, \code{while} or \code{repeat} ! Undefined control sequence. l.7039 \code{break} breaks out of a \code {for}, \code{while} or \code{repeat} ! Undefined control sequence. l.7039 ...break} breaks out of a \code{for}, \code {while} or \code{repeat} ! Undefined control sequence. l.7039 ...t of a \code{for}, \code{while} or \code {repeat} ! Undefined control sequence. l.7041 inner-most loop. \code {next} halts the processing of the current ! Undefined control sequence. l.7042 ... advances the looping index. Both \code {break} and ! Undefined control sequence. l.7043 \code {next} apply only to the innermost of nested loops. ! Undefined control sequence. l.7045 ...n mistake to forget to put braces (\code {\{ .. \}}) ! Undefined control sequence. l.7046 around your statements, e.g., after \code {if(..)} or \code{for(....)}. ! Undefined control sequence. l.7046 ...ents, e.g., after \code{if(..)} or \code {for(....)}. ! Undefined control sequence. l.7047 ... should not have a newline between \code {\}} and ! Undefined control sequence. l.7048 \code {else} to avoid a syntax error in entering a \code{if ... else} ! Undefined control sequence. l.7048 ...avoid a syntax error in entering a \code {if ... else} ! Undefined control sequence. l.7049 construct at the keyboard or via \code {source}. ! Undefined control sequence. l.7051 is to always use braces, e.g., for \code {if} clauses. ! Undefined control sequence. l.7053 The \code {seq} in a \code{for} loop is evaluated at the start of ! Undefined control sequence. l.7053 The \code{seq} in a \code {for} loop is evaluated at the start of ! Undefined control sequence. l.7055 \code {seq} has length zero the body of the loop is skipped. Otherwise... ! Undefined control sequence. l.7056 variable \code {var} is assigned in turn the value of each element of ! Undefined control sequence. l.7057 \code {seq}. You can assign to \code{var} within the body of the loop, ! Undefined control sequence. l.7057 \code{seq}. You can assign to \code {var} within the body of the loop, ! Undefined control sequence. l.7059 \code {var} remains as a variable containing its latest value. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7061 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7063 \begin{Value} ! Undefined control sequence. l.7064 \code {if} returns the value of the expression evaluated, or ! Undefined control sequence. l.7065 \code {NULL} invisibly if none was (which may happen if there is no ! Undefined control sequence. l.7066 \code {else}). ! Undefined control sequence. l.7068 \code {for}, \code{while} and \code{repeat} return \code{NULL} invisibly. ! Undefined control sequence. l.7068 \code{for}, \code {while} and \code{repeat} return \code{NULL} invisibly. ! Undefined control sequence. l.7068 \code{for}, \code{while} and \code {repeat} return \code{NULL} invisibly. ! Undefined control sequence. l.7068 ...de{while} and \code{repeat} return \code {NULL} invisibly. ! Undefined control sequence. l.7069 \code {for} sets \code{var} to the last used element of \code{seq}, ! Undefined control sequence. l.7069 \code{for} sets \code {var} to the last used element of \code{seq}, ! Undefined control sequence. l.7069 ...e{var} to the last used element of \code {seq}, ! Undefined control sequence. l.7070 or to \code {NULL} if it was of length zero. ! Undefined control sequence. l.7072 \code {break} and \code{next} do not return a value as they transfer ! Undefined control sequence. l.7072 \code{break} and \code {next} do not return a value as they transfer ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7074 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7076 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7080 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7082 \begin{SeeAlso} \relax ! Undefined control sequence. l.7083 \code {\LinkA{Syntax}{Syntax}} for the basic \R{} syntax and operators, ! Undefined control sequence. l.7083 \code{\LinkA {Syntax}{Syntax}} for the basic \R{} syntax and operators, ! Undefined control sequence. l.7083 ...\LinkA{Syntax}{Syntax}} for the basic \R {} syntax and operators, ! Undefined control sequence. l.7084 \code {\LinkA{Paren}{Paren}} for parentheses and braces. ! Undefined control sequence. l.7084 \code{\LinkA {Paren}{Paren}} for parentheses and braces. ! Undefined control sequence. l.7086 \code {\LinkA{ifelse}{ifelse}}, \code{\LinkA{switch}{switch}} for othe... ! Undefined control sequence. l.7086 \code{\LinkA {ifelse}{ifelse}}, \code{\LinkA{switch}{switch}} for othe... ! Undefined control sequence. l.7086 \code{\LinkA{ifelse}{ifelse}}, \code {\LinkA{switch}{switch}} for othe... ! Undefined control sequence. l.7086 \code{\LinkA{ifelse}{ifelse}}, \code{\LinkA {switch}{switch}} for othe... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7087 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7089 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7090 \begin{ExampleCode} ! Missing $ inserted. $ l.7094 cat(n, ": ", sum(x^ 2), "\n", sep = "") ! Undefined control sequence. l.7094 cat(n, ": ", sum(x^2), "\n ", sep = "") ! Extra }, or forgotten $. l.7095 } ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7098 \end{ExampleCode} ! Missing $ inserted. $ l.7098 \end{ExampleCode} ! Missing } inserted. } l.7098 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7099 \end{Examples} ! Undefined control sequence. l.7100 \HeaderA {copyright}{Copyrights of Files Used to Build R}{copyright} ! Undefined control sequence. l.7101 \aliasA {copyrights}{copyright}{copyrights} ! Undefined control sequence. l.7102 \keyword {misc}{copyright} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7104 \begin{Description} \relax ! Undefined control sequence. l.7105 \R {} is released under the `GNU Public License': see ! Undefined control sequence. l.7106 \code {\LinkA{license}{license}} for details. The license describes y... ! Undefined control sequence. l.7106 \code{\LinkA {license}{license}} for details. The license describes y... ! Undefined control sequence. l.7107 to use \R {}. Copyright is concerned with ownership of intellectual ! Undefined control sequence. l.7111 \code {\LinkA{contributors}{contributors}}) for the ability to use the... ! Undefined control sequence. l.7111 \code{\LinkA {contributors}{contributors}}) for the ability to use the... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7112 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7114 \begin{Details} \relax ! Undefined control sequence. l.7115 The file \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/COPYRIGHTS} lists th... ! Undefined control sequence. l.7115 The file \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/COPYRIGHTS} lists th... ! Undefined control sequence. l.7115 The file \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/COPYRIGHTS} lists th... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7117 \end{Details} ! Undefined control sequence. l.7118 \HeaderA {crossprod}{Matrix Crossproduct}{crossprod} [35! Undefined control sequence. l.7119 \aliasA {tcrossprod}{crossprod}{tcrossprod} ! Undefined control sequence. l.7120 \keyword {algebra}{crossprod} ! Undefined control sequence. l.7121 \keyword {array}{crossprod} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7123 \begin{Description} \relax ! Undefined control sequence. l.7124 Given matrices \code {x} and \code{y} as arguments, return a matrix ! Undefined control sequence. l.7124 Given matrices \code{x} and \code {y} as arguments, return a matrix ! Undefined control sequence. l.7126 faster than) the call \code {t(x) \%*\% y} (\code{crossprod}) or ! Undefined control sequence. l.7126 ...han) the call \code{t(x) \%*\% y} (\code {crossprod}) or ! Undefined control sequence. l.7127 \code {x \%*\% t(y)} (\code{tcrossprod}). ! Undefined control sequence. l.7127 \code{x \%*\% t(y)} (\code {tcrossprod}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7128 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7130 \begin{Usage} [71]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7136 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7138 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7139 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7140 \item[\code{x, y}] numeric or complex matrices (or vectors): \code{y ... ! Undefined control sequence. l.7140 ... or complex matrices (or vectors): \code {y = NULL} ! Undefined control sequence. l.7141 is taken to be the same matrix as \code {x}. Vectors are promoted to ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7143 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7144 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7146 \begin{Value} ! Undefined control sequence. l.7147 ...r complex matrix, with appropriate \code {dimnames} taken ! Undefined control sequence. l.7148 from \code {x} and \code{y}. ! Undefined control sequence. l.7148 from \code{x} and \code {y}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7149 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7151 \begin{Note} \relax ! Undefined control sequence. l.7152 When \code {x} or \code{y} are not matrices, they are treated as colum... ! Undefined control sequence. l.7152 When \code{x} or \code {y} are not matrices, they are treated as colum... ! Undefined control sequence. l.7153 row matrices, but their \code {\LinkA{names}{names}} are usually \bold... ! Undefined control sequence. l.7153 row matrices, but their \code{\LinkA {names}{names}} are usually \bold... ! Undefined control sequence. l.7153 ...{\LinkA{names}{names}} are usually \bold {not} ! Undefined control sequence. l.7154 promoted to \code {\LinkA{dimnames}{dimnames}}. Hence, currently, the... ! Undefined control sequence. l.7154 promoted to \code{\LinkA {dimnames}{dimnames}}. Hence, currently, the... ! Undefined control sequence. l.7157 ...ation, these matrix products (also \code {\LinkA{\Rpercent{}*\Rperc... ! Undefined control sequence. l.7157 ...these matrix products (also \code{\LinkA {\Rpercent{}*\Rpercent{}}{... ! Undefined control sequence. l.7157 ...ix products (also \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.... ! Undefined control sequence. l.7157 ...(also \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}}) ! Undefined control sequence. l.7159 that more cases are allowed, since \R {} 3.2.0. ! Undefined control sequence. l.7162 products can be controlled by \code {\LinkA{options}{options}("matprod... ! Undefined control sequence. l.7162 products can be controlled by \code{\LinkA {options}{options}("matprod... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7163 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7165 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7169 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7171 \begin{SeeAlso} \relax ! Undefined control sequence. l.7172 \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} and outer p... ! Undefined control sequence. l.7172 \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} and outer p... ! Undefined control sequence. l.7172 \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.Rpcent.}} and outer p... ! Undefined control sequence. l.7172 \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}} and outer p... ! Undefined control sequence. l.7172 ...cent.*.Rpcent.}} and outer product \code {\LinkA{\Rpercent{}o\Rperc... ! Undefined control sequence. l.7172 ...Rpcent.}} and outer product \code{\LinkA {\Rpercent{}o\Rpercent{}}{... ! Undefined control sequence. l.7172 ...and outer product \code{\LinkA{\Rpercent {}o\Rpercent{}}{.Rpcent.o.... ! Undefined control sequence. l.7172 ...oduct \code{\LinkA{\Rpercent{}o\Rpercent {}}{.Rpcent.o.Rpcent.}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7173 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7175 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7176 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.7177 (z <- crossprod(1:4)) # = sum(1 + 2^2 + 3^2 + 4^2) ! Missing $ inserted. $ l.7177 (z <- crossprod(1:4)) # = sum(1 + 2^ 2 + 3^2 + 4^2) ! You can't use `macro parameter character #' in math mode. l.7178 drop(z) # scalar ! You can't use `macro parameter character #' in math mode. l.7180 tcrossprod(as.matrix(x)) # is ! You can't use `macro parameter character #' in math mode. l.7183 tcrossprod(x) # no dimnames ! Missing $ inserted. $ l.7184 Underfull \hbox (badness 1681) in paragraph at lines 7161--7184 \OT1/cmr/m/n/10 R. A., Cham-bers, J. M. and Wilks, A. R. (1988) \OT1/cmr/m/it/1 0 The New S Lan- Underfull \hbox (badness 1360) in paragraph at lines 7161--7184 \OT1/cmr/m/n/10 prod-uct o.Rpcent.o.Rpcent.. (z <- crossprod(1:4)) = sum(1 Underfull \hbox (badness 1331) in paragraph at lines 7161--7184 \OT1/cmr/m/n/10 + 2$[] + 3[] + 4[])\OML/cmm/m/it/10 drop\OT1/cmr/m/n/10 (\OML/c mm/m/it/10 z\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 scalarx < \OMS/cmsy/m/n/10 ^^@\OT 1/cmr/m/n/10 1 : 4; \OML/cmm/m/it/10 names\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\O T1/cmr/m/n/10 ) \OML/cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 letters \OT1/cmr/m/n/10 [1 : Overfull \hbox (143.49684pt too wide) in paragraph at lines 7161--7184 \OT1/cmr/m/n/10 4]; \OML/cmm/m/it/10 xtcrossprod\OT1/cmr/m/n/10 (\OML/cmm/m/it/ 10 as:matrix\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ))\OML/cmm/m/it/ 10 isidentical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 tcrossprod\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 as:matrix\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ))\OML /cmm/m/it/10 ; crossprod\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 t\OT1/cmr/m/n/10 (\OM L/cmm/m/it/10 x\OT1/cmr/m/n/10 )))\OML/cmm/m/it/10 tcrossprod\OT1/cmr/m/n/10 (\ OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 nodimnames$ ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7189 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7190 \end{Examples} ! Undefined control sequence. l.7191 \HeaderA {Cstack\_info}{Report Information on C Stack Size and Usage}{... ! Undefined control sequence. l.7192 \keyword {utilities}{Cstack\_info} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7194 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7196 \end{Description} Underfull \hbox (badness 2809) in paragraph at lines 3132--3138 @textrm (or set the en-vi-ron-ment vari-able @texttt _R_BUILD_KEEP_EMPTY_DIRS_[ ] @textrm to `@texttt TRUE[]@textrm '[], or have a [36 ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7198 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7202 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7204 \begin{Details} \relax ! Undefined control sequence. l.7205 ... C stack information is recorded when \R {} is ! Undefined control sequence. l.7207 unavailable, the \code {size} will be returned as \code{NA}, and ! Undefined control sequence. l.7207 ...he \code{size} will be returned as \code {NA}, and ! Undefined control sequence. l.7212 Windows, Linux (using \code {glibc}), macOS and FreeBSD but a heuristic ! Undefined control sequence. l.7215 ...istic is not used on embedded uses of \R {} on platforms where the ! Undefined control sequence. l.7218 ...uation depth' is the number of nested \R {} expressions ! Undefined control sequence. l.7220 \code {\LinkA{options}{options}("expressions")}. ! Undefined control sequence. l.7220 \code{\LinkA {options}{options}("expressions")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7221 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7223 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7225 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7226 \item[\code{size}] The size of the stack (in bytes), or \code{NA} if ... ! Undefined control sequence. l.7226 ...e size of the stack (in bytes), or \code {NA} if unknown. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7227 \item[\code{current}] The estimated current usage (in bytes), possibl... ! Undefined control sequence. l.7227 ...current usage (in bytes), possibly \code {NA}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7228 \item[\code{direction}] \code{1} (stack grows down, the usual case) or ! Undefined control sequence. l.7228 \item[\code{direction}] \code {1} (stack grows down, the usual case) or ! Undefined control sequence. l.7229 \code {-1} (stack grows up). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7230 \item[\code{eval\_depth}] The current evaluation depth (including two... ! Undefined control sequence. l.7231 for the call to \code {Cstack\_info}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7232 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7233 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7235 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7236 \begin{ExampleCode} ! Missing $ inserted. $ l.7238 Cstack_ info() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7239 \end{ExampleCode} ! Missing $ inserted. $ l.7239 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7240 \end{Examples} ! Undefined control sequence. l.7241 \HeaderA {cumsum}{Cumulative Sums, Products, and Extremes}{cumsum} ! Undefined control sequence. l.7242 \aliasA {cummax}{cumsum}{cummax} ! Undefined control sequence. l.7243 \aliasA {cummin}{cumsum}{cummin} ! Undefined control sequence. l.7244 \aliasA {cumprod}{cumsum}{cumprod} ! Undefined control sequence. l.7245 \keyword {arith}{cumsum} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7247 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7250 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7252 \begin{Usage} Underfull \hbox (badness 1755) in paragraph at lines 7238--7253 \OT1/cmr/m/n/10 cum-max-cum-sum-cum-max cum-min-cum-sum-cum-min cumprod-cum-sum -cumprod [72]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7259 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7261 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7262 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7263 \item[\code{x}] a numeric or complex (not \code{cummin} or \code{cumm... ! Undefined control sequence. l.7263 ...code{x}] a numeric or complex (not \code {cummin} or \code{cummax}) ! Undefined control sequence. l.7263 ...c or complex (not \code{cummin} or \code {cummax}) ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7265 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7266 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7268 \begin{Details} \relax ! Undefined control sequence. l.7270 individually or via the \code {\LinkA{Math}{S3groupGeneric}} group gen... ! Undefined control sequence. l.7270 individually or via the \code{\LinkA {Math}{S3groupGeneric}} group gen... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7271 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7273 \begin{Value} ! Undefined control sequence. l.7274 ...tor of the same length and type as \code {x} (after coercion), ! Undefined control sequence. l.7275 except that \code {cumprod} returns a numeric vector for integer input ! Undefined control sequence. l.7276 (for consistency with \code {*}). Names are preserved. ! Undefined control sequence. l.7278 An \code {NA} value in \code{x} causes the corresponding and following ! Undefined control sequence. l.7278 An \code{NA} value in \code {x} causes the corresponding and following ! Undefined control sequence. l.7279 elements of the return value to be \code {NA}, as does integer overflow ! Undefined control sequence. l.7280 in \code {cumsum} (with a warning). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7281 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7283 \begin{Section} {S4 methods} ! Undefined control sequence. l.7284 \code {cumsum} and \code{cumprod} are S4 generic functions: ! Undefined control sequence. l.7284 \code{cumsum} and \code {cumprod} are S4 generic functions: ! Undefined control sequence. l.7286 \code {\LinkA{Math}{S4groupGeneric}} group generic. ! Undefined control sequence. l.7286 \code{\LinkA {Math}{S4groupGeneric}} group generic. ! Undefined control sequence. l.7287 \code {cummax} and \code{cummin} are individually S4 generic functions. ! Undefined control sequence. l.7287 \code{cummax} and \code {cummin} are individually S4 generic functions. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7288 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7290 \begin{References} \relax ! Undefined control sequence. l.7293 Wadsworth \& Brooks/Cole. (\code {cumsum} only.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7294 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7296 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7297 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7302 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7303 \end{Examples} ! Undefined control sequence. l.7304 \HeaderA {curlGetHeaders}{Retrieve Headers from URLs}{curlGetHeaders} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l. [377306 \begin{Description} \relax ! Undefined control sequence. l.7308 \code {http://}, \code{ftp://}, \code{https://} and \code{ftps://}. ! Undefined control sequence. l.7308 \code{http://}, \code {ftp://}, \code{https://} and \code{ftps://}. ! Undefined control sequence. l.7308 \code{http://}, \code{ftp://}, \code {https://} and \code{ftps://}. ! Undefined control sequence. l.7308 ...\code{ftp://}, \code{https://} and \code {ftps://}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7310 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7312 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7316 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7318 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7319 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7320 \item[\code{url}] character string specifying the URL. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7321 \item[\code{redirect}] logical: should redirections be followed? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7322 \item[\code{verify}] logical: should certificates be verified as valid ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7324 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7325 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7327 \begin{Details} \relax ! Undefined control sequence. l.7328 This reports what \command {curl -I -L} or \command{curl -I} would ! Undefined control sequence. l.7328 ...ts what \command{curl -I -L} or \command {curl -I} would ! Undefined control sequence. l.7329 report. For a \code {ftp://} URL the `headers' are a record of ! Undefined control sequence. l.7336 It uses \code {\LinkA{getOption}{getOption}("timeout")} for the connec... ! Undefined control sequence. l.7336 It uses \code{\LinkA {getOption}{getOption}("timeout")} for the connec... ! Undefined control sequence. l.7341 \code {\LinkA{options}{options}(internet.info = 1)}. ! Undefined control sequence. l.7341 \code{\LinkA {options}{options}(internet.info = 1)}. ! Undefined control sequence. l.7344 some do: this will result in a \code {status} of \code{405}. ! Undefined control sequence. l.7344 ... will result in a \code{status} of \code {405}. ! Undefined control sequence. l.7347 \code {\LinkA{download.file}{download.file}}. ! Undefined control sequence. l.7347 \code{\LinkA {download.file}{download.file}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7353 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7355 \begin{Value} ! Undefined control sequence. l.7356 ...cter vector with integer attribute \code {"status"} (the ! Undefined control sequence. l.7361 \url {https://en.wikipedia.org/wiki/List_of_HTTP_status_codes} and ! Missing $ inserted. $ l.7361 \url{https://en.wikipedia.org/wiki/List_ of_HTTP_status_codes} and ! Extra }, or forgotten $. l.7361 ...edia.org/wiki/List_of_HTTP_status_codes} and ! Undefined control sequence. l.7362 \url {https://en.wikipedia.org/wiki/List_of_FTP_server_return_codes}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7364 \end{Value} ! Missing $ inserted. $ l.7364 \end{Value} ! Missing } inserted. } l.7364 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7366 \begin{SeeAlso} \relax ! Undefined control sequence. l.7367 \code {\LinkA{capabilities}{capabilities}("libcurl")} to see if this i... ! Undefined control sequence. l.7367 \code{\LinkA {capabilities}{capabilities}("libcurl")} to see if this i... Underfull \hbox (badness 10000) in paragraph at lines 7360--7368 []\OT1/cmr/m/n/10 For the in-ter-pre-ta-tion of `sta-tus' codes see Overfull \hbox (456.04109pt too wide) in paragraph at lines 7360--7368 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/List$[]\OML/cmm/m/it/10 f[]TTP[]t atus[]odesand[]:AsuccessfulFTPconnectionwillusuallyhavestatus\OT1/cmr/m/n/10 25 0\OML/cmm/m/it/10 or\OT1/cmr/m/n/10 350\OML/cmm/m/it/10 :$ [73]] ! Undefined control sequence. l.7369 \code {\LinkA{options}{options}} \code{HTTPUserAgent} and \code{timeou... ! Undefined control sequence. l.7369 \code{\LinkA {options}{options}} \code{HTTPUserAgent} and \code{timeou... ! Undefined control sequence. l.7369 \code{\LinkA{options}{options}} \code {HTTPUserAgent} and \code{timeou... ! Undefined control sequence. l.7369 ...options}} \code{HTTPUserAgent} and \code {timeout} are used. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7370 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7372 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7373 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.7374 # # needs Internet access, results vary ! You can't use `macro parameter character #' in horizontal mode. l.7374 ## needs Internet access, results vary ! You can't use `macro parameter character #' in horizontal mode. l.7375 ...Headers("http://bugs.r-project.org") # # this redirects to https:// ! You can't use `macro parameter character #' in horizontal mode. l.7375 ...eaders("http://bugs.r-project.org") ## this redirects to https:// ! You can't use `macro parameter character #' in horizontal mode. l.7376 ...ers("https://httpbin.org/status/404") # # returns status ! You can't use `macro parameter character #' in horizontal mode. l.7376 ...rs("https://httpbin.org/status/404") ## returns status ! You can't use `macro parameter character #' in vertical mode. l.7379 # # Not run: ## a not-always-available site: ! You can't use `macro parameter character #' in vertical mode. l.7379 ## Not run: ## a not-always-available site: ! You can't use `macro parameter character #' in horizontal mode. l.7379 ## Not run: # # a not-always-available site: ! You can't use `macro parameter character #' in horizontal mode. l.7379 ## Not run: ## a not-always-available site: Underfull \hbox (badness 10000) in paragraph at lines 7379--7381 []\OT1/cmr/m/n/10 Not run: a not-always-available site: curl-Get-H-ead- ! You can't use `macro parameter character #' in vertical mode. l.7382 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.7382 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7383 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7384 \end{Examples} ! Undefined control sequence. l.7385 \HeaderA {cut}{Convert Numeric to Factor}{cut} ! Undefined control sequence. l.7386 \methaliasA [38 {cut.default}{cut}{cut.default} ! Undefined control sequence. l.7387 \keyword {category}{cut} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7389 \begin{Description} \relax ! Undefined control sequence. l.7390 \code {cut} divides the range of \code{x} into intervals ! Undefined control sequence. l.7390 \code{cut} divides the range of \code {x} into intervals ! Undefined control sequence. l.7391 and codes the values in \code {x} according to which ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7394 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7396 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7405 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7407 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7408 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7409 \item[\code{x}] a numeric vector which is to be converted to a factor... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7410 \item[\code{breaks}] either a numeric vector of two or more unique cu... ! Undefined control sequence. l.7412 intervals into which \code {x} is to be cut. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7413 \item[\code{labels}] labels for the levels of the resulting category.... ! Undefined control sequence. l.7414 labels are constructed using \code {"(a,b]"} interval notation. If ! Undefined control sequence. l.7415 \code {labels = FALSE}, simple integer codes are returned instead of ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7417 \item[\code{include.lowest}] logical, indicating if an `x[i]' equal to ! Undefined control sequence. l.7418 the lowest (or highest, for \code {right = FALSE}) `breaks' ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7420 \item[\code{right}] logical, indicating if the intervals should be cl... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7422 \item[\code{dig.lab}] integer which is used when labels are not given... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7424 \item[\code{ordered\_result}] logical: should the result be an ordere... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7425 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7426 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7427 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7429 \begin{Details} \relax ! Undefined control sequence. l.7430 When \code {breaks} is specified as a single number, the range of the ! Undefined control sequence. l.7431 data is divided into \code {breaks} pieces of equal length, and then ! Undefined control sequence. l.7433 ...l within the break intervals. (If \code {x} ! Undefined control sequence. l.7437 If a \code {labels} parameter is specified, its values are used to name ! Undefined control sequence. l.7439 constructed as \code {"(b1, b2]"}, \code{"(b2, b3]"} etc. for ! Undefined control sequence. l.7439 constructed as \code{"(b1, b2]"}, \code {"(b2, b3]"} etc. for ! Undefined control sequence. l.7440 \code {right = TRUE} and as \code{"[b1, b2)"}, \ldots if \code{right = ! Undefined control sequence. l.7440 \code{right = TRUE} and as \code {"[b1, b2)"}, \ldots if \code{right = ! Undefined control sequence. l.7440 ...nd as \code{"[b1, b2)"}, \ldots if \code {right = ! Undefined control sequence. l.7442 In this case, \code {dig.lab} indicates the minimum number of digits ! Undefined control sequence. l.7443 ... be used in formatting the numbers \code {b1}, \code{b2}, \ldots. ! Undefined control sequence. l.7443 ... formatting the numbers \code{b1}, \code {b2}, \ldots. ! Undefined control sequence. l.7446 \code {"Range3"} will be used. Formatting is done by ! Undefined control sequence. l.7447 \code {\LinkA{formatC}{formatC}}. ! Undefined control sequence. l.7447 \code{\LinkA {formatC}{formatC}}. ! Undefined control sequence. l.7449 ...thod will sort a numeric vector of \code {breaks}, but ! Undefined control sequence. l.7450 other methods are not required to and \code {labels} will correspond to ! Undefined control sequence. l.7453 As from \R {} 3.2.0, \code{getOption("OutDec")} is consulted when labels ! Undefined control sequence. l.7453 As from \R{} 3.2.0, \code {getOption("OutDec")} is consulted when labels ! Undefined control sequence. l.7454 are constructed for \code {labels = NULL}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7455 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7457 \begin{Value} ! Undefined control sequence. l.7458 A \code {\LinkA{factor}{factor}} is returned, unless \code{labels = FA... ! Undefined control sequence. l.7458 A \code{\LinkA {factor}{factor}} is returned, unless \code{labels = FA... ! Undefined control sequence. l.7458 ...ctor}{factor}} is returned, unless \code {labels = FALSE} which [74]] ! Undefined control sequence. l.7461 ...es which fall outside the range of \code {breaks} are coded as ! Undefined control sequence. l.7462 \code {NA}, as are \code{NaN} and \code{NA} values. ! Undefined control sequence. l.7462 \code{NA}, as are \code {NaN} and \code{NA} values. ! Undefined control sequence. l.7462 \code{NA}, as are \code{NaN} and \code {NA} values. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7463 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7465 \begin{Note} \relax ! Undefined control sequence. l.7466 Instead of \code {table(cut(x, br))}, \code{hist(x, br, plot = FALSE)} is ! Undefined control sequence. l.7466 Instead of \code{table(cut(x, br))}, \code {hist(x, br, plot = FALSE)} is ! Undefined control sequence. l.7467 ...nd less memory hungry. Instead of \code {cut(*, ! Undefined control sequence. l.7468 labels = FALSE)}, \code {\LinkA{findInterval}{findInterval}()} is ... ! Undefined control sequence. l.7468 labels = FALSE)}, \code{\LinkA {findInterval}{findInterval}()} is ... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7469 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7471 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7475 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7477 \begin{SeeAlso} \relax ! Undefined control sequence. l.7478 \code {\LinkA{split}{split}} for splitting a variable according to a g... ! Undefined control sequence. l.7478 \code{\LinkA {split}{split}} for splitting a variable according to a g... ! Undefined control sequence. l.7479 \code {\LinkA{factor}{factor}}, \code{\LinkA{tabulate}{tabulate}}, \co... ! Undefined control sequence. l.7479 \code{\LinkA {factor}{factor}}, \code{\LinkA{tabulate}{tabulate}}, \co... ! Undefined control sequence. l.7479 \code{\LinkA{factor}{factor}}, \code {\LinkA{tabulate}{tabulate}}, \co... ! Undefined control sequence. l.7479 \code{\LinkA{factor}{factor}}, \code{\LinkA {tabulate}{tabulate}}, \co... ! Undefined control sequence. l.7479 ...\code{\LinkA{tabulate}{tabulate}}, \code {\LinkA{table}{table}}, ! Undefined control sequence. l.7479 ...LinkA{tabulate}{tabulate}}, \code{\LinkA {table}{table}}, ! Undefined control sequence. l.7480 \code {\LinkA{findInterval}{findInterval}}. ! Undefined control sequence. l.7480 \code{\LinkA {findInterval}{findInterval}}. ! Undefined control sequence. l.7482 \code {\LinkA{quantile}{quantile}} for ways of choosing breaks of roug... ! Undefined control sequence. l.7482 \code{\LinkA {quantile}{quantile}} for ways of choosing breaks of roug... ! Undefined control sequence. l.7485 \code {\LinkA{.bincode}{.bincode}} for a bare-bones version. ! Undefined control sequence. l.7485 \code{\LinkA {.bincode}{.bincode}} for a bare-bones version. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7486 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7488 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7489 \begin{ExampleCode} ! Missing $ inserted. $ l.7494 ! You can't use `macro parameter character #' in horizontal mode. l.7495 cut(rep(1,5), 4) # -- dummy ! You can't use `macro parameter character #' in vertical mode. l.7504 # #--- some values OUTSIDE the breaks : ! You can't use `macro parameter character #' in vertical mode. l.7504 ## --- some values OUTSIDE the breaks : ! You can't use `macro parameter character #' in horizontal mode. l.7507 which(is.na(cx)); x[is.na(cx)] # -- the first 9 values 0 ! You can't use `macro parameter character #' in horizontal mode. l.7508 which(is.na(cxl)); x[is.na(cxl)] # -- the last 5 values 8 ! You can't use `macro parameter character #' in vertical mode. l.7511 # # Label construction: ! You can't use `macro parameter character #' in vertical mode. l.7511 ## Label construction: ! You can't use `macro parameter character #' in horizontal mode. l.7517 # extra digits don't "harm" here ! You can't use `macro parameter character #' in horizontal mode. l.7519 # - the same, since no exact INT! ! You can't use `macro parameter character #' in vertical mode. l.7521 # # sometimes the default dig.lab is not enough to be avoid confusion: ! You can't use `macro parameter character #' in vertical mode. l.7521 ## sometimes the default dig.lab is not enough to be avoid confusion: ! You can't use `macro parameter character #' in vertical mode. l.7526 # # one way to extract the breakpoints ! You can't use `macro parameter character #' in vertical mode. l.7526 ## one way to extract the breakpoints ! Missing $ inserted. $ l.7529 upper = as.numeric( sub("[^ ,]*,([^]]*)\\]", "\\1", labs) )) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7530 \end{ExampleCode} ! Missing $ inserted. $ l.7530 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H < Underfull \hbox (badness 4556) in paragraph at lines 3369--3377 @textrm Others you may see are @texttt \VignettePackage[] @textrm (cur-rently i g-nored), @texttt \VignetteDepends[] Underfull \hbox (badness 2617) in paragraph at lines 3369--3377 @textrm pack-age in-stal-la-tion time to cre-ate the saved data frame `@texttt Meta/vignette.rds[]@textrm '[], but Underfull \hbox (badness 3579) in paragraph at lines 3369--3377 @textrm The @texttt \VignetteEngine[] @textrm state-ment is de-scribed in [][]$ @textsy h$@textrm un-de-fined$@textsy i$ @textrm [Non-Sweave vi-gnettes], [39return> for immediate help. ... l.7531 \end{Examples} ! Undefined control sequence. l.7532 \HeaderA {cut.POSIXt}{Convert a Date or Date-Time Object to a Factor}{... ! Undefined control sequence. l.7533 \aliasA {cut.Date}{cut.POSIXt}{cut.Date} ! Undefined control sequence. l.7534 \keyword {manip}{cut.POSIXt} ! Undefined control sequence. l.7535 \keyword {chron}{cut.POSIXt} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7537 \begin{Description} \relax ! Undefined control sequence. l.7538 Method for \code {\LinkA{cut}{cut}} applied to date-time objects. ! Undefined control sequence. l.7538 Method for \code{\LinkA {cut}{cut}} applied to date-time objects. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7539 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7541 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7551 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7553 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7554 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7555 \item[\code{x}] an object inheriting from class \code{"POSIXt"} or \c... ! Undefined control sequence. l.7555 ...}] an object inheriting from class \code {"POSIXt"} or \code{"Date"}. ! Undefined control sequence. l.7555 ...ting from class \code{"POSIXt"} or \code {"Date"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7556 \item[\code{breaks}] ! Undefined control sequence. l.7558 intervals which \code {x} is to be cut into \emph{or} an ! Undefined control sequence. l.7559 interval specification, one of \code {"sec"}, \code{"min"}, ! Undefined control sequence. l.7559 ...pecification, one of \code{"sec"}, \code {"min"}, ! Undefined control sequence. l.7560 \code {"hour"}, \code{"day"}, \code{"DSTday"}, \code{"week"}, ! Undefined control sequence. l.7560 \code{"hour"}, \code {"day"}, \code{"DSTday"}, \code{"week"}, ! Undefined control sequence. l.7560 \code{"hour"}, \code{"day"}, \code {"DSTday"}, \code{"week"}, ! Undefined control sequence. l.7560 ..."}, \code{"day"}, \code{"DSTday"}, \code {"week"}, ! Undefined control sequence. l.7561 \code {"month"}, \code{"quarter"} or \code{"year"}, optionally ! Undefined control sequence. l.7561 \code{"month"}, \code {"quarter"} or \code{"year"}, optionally ! Undefined control sequence. l.7561 \code{"month"}, \code{"quarter"} or \code {"year"}, optionally ! Undefined control sequence. l.7562 ...nteger and a space, or followed by \code {"s"}. ! Undefined control sequence. l.7563 (For \code {"Date"} objects only interval specifications using ! Undefined control sequence. l.7564 \code {"day"}, \code{"week"}, \code{"month"}, \code{"quarter"} and ! Undefined control sequence. l.7564 \code{"day"}, \code {"week"}, \code{"month"}, \code{"quarter"} and ! Undefined control sequence. l.7564 \code{"day"}, \code{"week"}, \code {"month"}, \code{"quarter"} and ! Undefined control sequence. l.7564 ..."}, \code{"week"}, \code{"month"}, \code {"quarter"} and ! Undefined control sequence. l.7565 \code {"year"} are allowed.) [75]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7567 \item[\code{labels}] ! Undefined control sequence. l.7570 ... included for the default value of \code {right}). If ! Undefined control sequence. l.7571 \code {labels = FALSE}, simple integer codes are returned instead ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7574 \item[\code{start.on.monday}] logical. If \code{breaks = "weeks"}, s... ! Undefined control sequence. l.7574 ...ode{start.on.monday}] logical. If \code {breaks = "weeks"}, should... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7576 \item[\code{right, ...}] arguments to be passed to or from other meth... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7577 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7578 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7580 \begin{Details} \relax ! Undefined control sequence. l.7581 Note that the default for \code {right} differs from the ! Undefined control sequence. l.7582 \LinkA {default method}{cut.default}. Using \code{include.lowest = ! Undefined control sequence. l.7582 ...fault method}{cut.default}. Using \code {include.lowest = ! Undefined control sequence. l.7585 Using \code {breaks = "quarter"} will create intervals of 3 calendar ! Undefined control sequence. l.7587 July 1 or October 1 (based upon \code {min(x)}) as appropriate. ! Undefined control sequence. l.7589 A vector of \code {breaks} will be sorted before use: \code{labels} sh... ! Undefined control sequence. l.7589 ...breaks} will be sorted before use: \code {labels} should ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7591 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7593 \begin{Value} ! Undefined control sequence. l.7594 A factor is returned, unless \code {labels = FALSE} which returns ! Undefined control sequence. l.7597 ...es which fall outside the range of \code {breaks} are coded as ! Undefined control sequence. l.7598 \code {NA}, as are and \code{NA} values. ! Undefined control sequence. l.7598 \code{NA}, as are and \code {NA} values. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7599 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7601 \begin{SeeAlso} \relax ! Undefined control sequence. l.7602 \code {\LinkA{seq.POSIXt}{seq.POSIXt}}, \code{\LinkA{seq.Date}{seq.Dat... ! Undefined control sequence. l.7602 \code{\LinkA {seq.POSIXt}{seq.POSIXt}}, \code{\LinkA{seq.Date}{seq.Dat... ! Undefined control sequence. l.7602 ...e{\LinkA{seq.POSIXt}{seq.POSIXt}}, \code {\LinkA{seq.Date}{seq.Date... ! Undefined control sequence. l.7602 ...A{seq.POSIXt}{seq.POSIXt}}, \code{\LinkA {seq.Date}{seq.Date}}, \co... ! Undefined control sequence. l.7602 ...\code{\LinkA{seq.Date}{seq.Date}}, \code {\LinkA{cut}{cut}} ! Undefined control sequence. l.7602 ...LinkA{seq.Date}{seq.Date}}, \code{\LinkA {cut}{cut}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7603 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7605 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7606 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.7607 # # random dates in a 10-week period ! You can't use `macro parameter character #' in horizontal mode. l.7607 ## random dates in a 10-week period ! You can't use `macro parameter character #' in vertical mode. l.7611 # The standards all have midnight as the start of the day, but some ! You can't use `macro parameter character #' in horizontal mode. l.7612 # people incorrectly interpret it at the end of the previous day ... ! You can't use `macro parameter character #' in horizontal mode. l.7615 # and a version with midnight included in the previous day: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7617 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7618 \end{Examples} ! Undefined control sequence. l.7619 \HeaderA {data.class}{Object Classes}{data.class} ! Undefined control sequence. l.7620 \keyword {classes}{data.class} ! Undefined control sequence. l.7621 \keyword {methods}{data.class} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7623 \begin{Description} \relax ! Undefined control sequence. l.7624 Determine the class of an arbitrary \R {} object. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7625 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7627 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7631 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7633 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7634 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7635 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.7635 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7636 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7637 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7639 \begin{Value} ! Undefined control sequence. l.7640 ... string giving the \emph{class} of \code {x}. ! Undefined control sequence. l.7642 ...lass is the (first element) of the \code {\LinkA{class}{class}} ! Undefined control sequence. l.7642 ... the (first element) of the \code{\LinkA {class}{class}} ! Undefined control sequence. l.7643 attribute if this is non-\code {NULL}, or inferred from the object's ! Undefined control sequence. l.7644 \code {dim} attribute if this is non-\code{NULL}, or \code{mode(x)}. ! Undefined control sequence. l.7644 \code{dim} attribute if this is non-\code {NULL}, or \code{mode(x)}. ! Undefined control sequence. l.7644 ...ute if this is non-\code{NULL}, or \code {mode(x)}. ! Undefined control sequence. l.7646 Simply speaking, \code {data.class(x)} returns what is typically useful ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7649 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7651 \begin{Note} \relax ! Undefined control sequence. l.7653 When \code {x} is \code{\LinkA{integer}{integer}}, the result of ! Undefined control sequence. l.7653 When \code{x} is \code {\LinkA{integer}{integer}}, the result of ! Undefined control sequence. l.7653 When \code{x} is \code{\LinkA {integer}{integer}}, the result of ! Undefined control sequence. l.7654 \code {data.class(x)} is \code{"numeric"} even when \code{x} is classed. ! Undefined control sequence. l.7654 \code{data.class(x)} is \code {"numeric"} even when \code{x} is classed. ! Undefined control sequence. l.7654 ...(x)} is \code{"numeric"} even when \code {x} is classed. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7655 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7657 \begin{SeeAlso} \relax ! Undefined control sequence. l.7658 \code {\LinkA{class}{class}} ! Undefined control sequence. l.7658 \code{\LinkA {class}{class}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7659 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7661 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7662 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.7664 data.class(factor(x)) # has a class attribute ! You can't use `macro parameter character #' in horizontal mode. l.7665 data.class(matrix(x, ncol = 13)) # has a dim attribute ! You can't use `macro parameter character #' in horizontal mode. l.7666 data.class(list(x)) # the same as mode(x) ! You can't use `macro parameter character #' in horizontal mode. l.7667 data. [40class(x) # the same as mode(x) ! You can't use `macro parameter character #' in horizontal mode. l.7669 stopifnot(data.class(1:2) == "numeric") # compatibility "rule" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7670 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7671 \end{Examples} ! Undefined control sequence. l.7672 \HeaderA {data.frame}{Data Frames}{data.frame} ! Undefined control sequence. l.7673 \aliasA {default.stringsAsFactors}{data.frame}{default.stringsAsFactors} ! Undefined control sequence. l.7674 \keyword {classes}{data.frame} ! Undefined control sequence. l.7675 \keyword {methods}{data.frame} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7677 \begin{Description} \relax ! Undefined control sequence. l.7678 The function \code {data.frame()} creates data frames, tightly coupled ! Undefined control sequence. l.7681 of \R {}'s modeling software. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7682 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7684 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 7669--7685 []\OT1/cmr/m/n/10 stopifnot(data.class(1:2) == "nu-meric") com-pat-i- Underfull \hbox (badness 10000) in paragraph at lines 7669--7685 \OT1/cmr/m/n/10 bil-ity "rule" data.frameData Frames-data.frame de- Underfull \hbox (badness 10000) in paragraph at lines 7669--7685 \OT1/cmr/m/n/10 fault.stringsAsFactorsdata.framedefault.stringsAsFactors class- es-data.frame [76]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7692 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7694 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7695 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7696 \item[\code{...}] these arguments are of either the form \code{value} or ! Undefined control sequence. l.7696 ...e arguments are of either the form \code {value} or ! Undefined control sequence. l.7697 \code {tag = value}. Component names are created based on the tag (if ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7699 \item[\code{row.names}] \code{NULL} or a single integer or character ... ! Undefined control sequence. l.7699 \item[\code{row.names}] \code {NULL} or a single integer or character ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7702 \item[\code{check.rows}] if \code{TRUE} then the rows are checked for ! Undefined control sequence. l.7702 \item[\code{check.rows}] if \code {TRUE} then the rows are checked for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7704 \item[\code{check.names}] logical. If \code{TRUE} then the names of the ! Undefined control sequence. l.7704 ...m[\code{check.names}] logical. If \code {TRUE} then the names of the ! Undefined control sequence. l.7707 If necessary they are adjusted (by \code {\LinkA{make.names}{make.name... ! Undefined control sequence. l.7707 ...ssary they are adjusted (by \code{\LinkA {make.names}{make.names}}) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7709 \item[\code{fix.empty.names}] logical indicating if arguments which are ! Undefined control sequence. l.7711 \code {someName = arg}) get an automatically constructed name or ! Undefined control sequence. l.7712 rather name \code {""}. Needs to be set to \code{FALSE} even when ! Undefined control sequence. l.7712 ...ame \code{""}. Needs to be set to \code {FALSE} even when ! Undefined control sequence. l.7713 \code {check.names} is false if \code{""} names should be kept. ! Undefined control sequence. l.7713 \code{check.names} is false if \code {""} names should be kept. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7714 \item[\code{stringsAsFactors}] logical: should character vectors be c... ! Undefined control sequence. l.7715 ...s? The `factory-fresh' default is \code {TRUE}, but ! Undefined control sequence. l.7716 this can be changed by setting \code {\LinkA{options}{options}(strings... ! Undefined control sequence. l.7716 this can be changed by setting \code{\LinkA {options}{options}(strings... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7718 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7719 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7721 \begin{Details} \relax ! Undefined control sequence. l.7723 unique row names, given class \code {"data.frame"}. If no variables ! Undefined control sequence. l.7728 but you need to use \code {check.names = FALSE} for \code{data.frame} ! Undefined control sequence. l.7728 ...use \code{check.names = FALSE} for \code {data.frame} ! Undefined control sequence. l.7733 \code {data.frame} converts each of its arguments to a data frame by ! Undefined control sequence. l.7734 calling \code {\LinkA{as.data.frame}{as.data.frame}(optional = TRUE)}.... ! Undefined control sequence. l.7734 calling \code{\LinkA {as.data.frame}{as.data.frame}(optional = TRUE)}.... ! Undefined control sequence. l.7736 arguments according to their classes: \R {} comes with many such methods. ! Undefined control sequence. l.7737 Character variables passed to \code {data.frame} are converted to ! Undefined control sequence. l.7738 factor columns unless protected by \code {\LinkA{I}{I}} or argument ! Undefined control sequence. l.7738 ...columns unless protected by \code{\LinkA {I}{I}} or argument ! Undefined control sequence. l.7739 \code {stringsAsFactors} is false. If a list or data ! Undefined control sequence. l.7740 frame or matrix is passed to \code {data.frame} it is as if each ! Undefined control sequence. l.7742 matrices protected by \code {\LinkA{I}{I}}). ! Undefined control sequence. l.7742 matrices protected by \code{\LinkA {I}{I}}). ! Undefined control sequence. l.7744 Objects passed to \code {data.frame} should have the same number of ! Undefined control sequence. l.7745 rows, but atomic vectors (see \code {\LinkA{is.vector}{is.vector}}), f... ! Undefined control sequence. l.7745 rows, but atomic vectors (see \code{\LinkA {is.vector}{is.vector}}), f... ! Undefined control sequence. l.7746 character vectors protected by \code {\LinkA{I}{I}} will be recycled a ! Undefined control sequence. l.7746 character vectors protected by \code{\LinkA {I}{I}} will be recycled a ! Undefined control sequence. l.7750 ...es are not supplied in the call to \code {data.frame}, the ! Undefined control sequence. l.7754 with a warning.) If \code {row.names} was supplied as \code{NULL} or no ! Undefined control sequence. l.7754 ...f \code{row.names} was supplied as \code {NULL} or no ! Undefined control sequence. l.7757 `automatic', and not preserved by \code {\LinkA{as.matrix}{as.matrix}}). ! Undefined control sequence. l.7757 ...atic', and not preserved by \code{\LinkA {as.matrix}{as.matrix}}). ! Undefined control sequence. l.7760 single row, the \code {row.names} is taken to specify the row names and [77 [41] ! Undefined control sequence. l.7763 ...rom vector inputs not protected by \code {\LinkA{I}{I}}. ! Undefined control sequence. l.7763 ...tor inputs not protected by \code{\LinkA {I}{I}}. ! Undefined control sequence. l.7765 \code {default.stringsAsFactors} is a utility that takes ! Undefined control sequence. l.7766 \code {\LinkA{getOption}{getOption}("stringsAsFactors")} and ensures t... ! Undefined control sequence. l.7766 \code{\LinkA {getOption}{getOption}("stringsAsFactors")} and ensures t... ! Undefined control sequence. l.7767 \code {TRUE} or \code{FALSE} (or throws an error if the value is not ! Undefined control sequence. l.7767 \code{TRUE} or \code {FALSE} (or throws an error if the value is not ! Undefined control sequence. l.7768 \code {NULL}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7769 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7771 \begin{Value} Underfull \hbox (badness 10000) in paragraph at lines 7765--7774 []\OT1/cmr/m/n/10 default.stringsAsFactors is a util-ity that takes getOp-tiong e-tOp- Underfull \hbox (badness 1038) in paragraph at lines 7765--7774 \OT1/cmr/m/n/10 tion("stringsAsFactors") and en-sures the re-sult is TRUE or FA LSE (or ! Undefined control sequence. l.7780 enclosing \code {I(...)} removed). For a named matrix/list/data frame ! Undefined control sequence. l.7787 and syntactically valid unless \code {check.names = FALSE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7788 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7790 \begin{Note} \relax ! Undefined control sequence. l.7791 In versions of \R {} prior to 2.4.0 \code{row.names} had to be ! Undefined control sequence. l.7791 In versions of \R{} prior to 2.4.0 \code {row.names} had to be ! Undefined control sequence. l.7792 ...e compatibility with such versions of \R {}, supply ! Undefined control sequence. l.7793 a character vector as the \code {row.names} argument. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7794 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7796 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l]> [35.7801 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7803 \begin{SeeAlso} \relax ! Undefined control sequence. l.7804 \code {\LinkA{I}{I}}, ! Undefined control sequence. l.7804 \code{\LinkA {I}{I}}, ! Undefined control sequence. l.7805 \code {\LinkA{plot.data.frame}{plot.data.frame}}, ! Undefined control sequence. l.7805 \code{\LinkA {plot.data.frame}{plot.data.frame}}, ! Undefined control sequence. l.7806 \code {\LinkA{print.data.frame}{print.data.frame}}, ! Undefined control sequence. l.7806 \code{\LinkA {print.data.frame}{print.data.frame}}, ! Undefined control sequence. l.7807 \code {\LinkA{row.names}{row.names}}, \code{\LinkA{names}{names}} (for... ! Undefined control sequence. l.7807 \code{\LinkA {row.names}{row.names}}, \code{\LinkA{names}{names}} (for... ! Undefined control sequence. l.7807 \code{\LinkA{row.names}{row.names}}, \code {\LinkA{names}{names}} (for... ! Undefined control sequence. l.7807 ...nkA{row.names}{row.names}}, \code{\LinkA {names}{names}} (for the c... ! Undefined control sequence. l.7808 \code {\LinkA{[.data.frame}{[.data.frame}} for subsetting methods ! Undefined control sequence. l.7808 \code{\LinkA {[.data.frame}{[.data.frame}} for subsetting methods ! Undefined control sequence. l.7809 and \code {I(matrix(..))} examples; ! Undefined control sequence. l.7810 \code {\LinkA{Math.data.frame}{Math.data.frame}} etc, about ! Undefined control sequence. l.7810 \code{\LinkA {Math.data.frame}{Math.data.frame}} etc, about ! Undefined control sequence. l.7811 \emph{Group} methods for \code {data.frame}s; ! Undefined control sequence. l.7812 \code {\LinkA{read.table}{read.table}}, ! Undefined control sequence. l.7812 \code{\LinkA {read.table}{read.table}}, ! Undefined control sequence. l.7813 \code {\LinkA{make.names}{make.names}}. ! Undefined control sequence. l.7813 \code{\LinkA {make.names}{make.names}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7814 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7816 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7817 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.7821 # # The "same" with automatic column names: ! You can't use `macro parameter character #' in horizontal mode. l.7821 ## The "same" with automatic column names: Underfull \hbox (badness 7722) in paragraph at lines 7775--7823 \OT1/cmr/m/n/10 print.data.frameprint.data.frame, row.namesrow.names, names-nam es (for Underfull \hbox (badness 1173) in paragraph at lines 7775--7823 \OT1/cmr/m/n/10 the col-umn names), [.data.frame[.data.frame for sub-set-ting m eth-ods and ! You can't use `macro parameter character #' in vertical mode. l.7826 # # do not convert to factor, using ]I() : ! You can't use `macro parameter character #' in vertical mode. l.7826 ## do not convert to factor, using I() : ! You can't use `macro parameter character #' in horizontal mode. l.7830 stopifnot(1:10 == row.names(d)) # {coercion} ! You can't use `macro parameter character #' in horizontal mode. l.7832 (d0 <- d[, FALSE]) # data frame with 0 columns and 10 rows ! You can't use `macro parameter character #' in horizontal mode. l.7833 (d.0 <- d[FALSE, ]) # <0 rows> data frame (3 named cols) ! You can't use `macro parameter character #' in horizontal mode. l.7834 (d00 <- d0[FALSE, ]) # data frame with 0 columns and 0 rows ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7835 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7836 \end{Examples} ! Undefined control sequence. l.7837 \HeaderA {data.matrix}{Convert a Data Frame to a Numeric Matrix}{data.... ! Undefined control sequence. l.7838 \keyword {array}{data.matrix} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7840 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7845 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7847 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7851 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7853 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7854 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7855 \item[\code{frame}] a data frame whose components are logical vectors, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7857 \item[\code{rownames.force}] logical indicating if the resulting matrix ! Undefined control sequence. l.7858 should have character (rather than \code {NULL}) ! Undefined control sequence. l.7859 \code {\LinkA{rownames}{rownames}}. The default, \code{NA}, uses \cod... ! Undefined control sequence. l.7859 \code{\LinkA {rownames}{rownames}}. The default, \code{NA}, uses \cod... ! Undefined control sequence. l.7859 ...ownames}{rownames}}. The default, \code {NA}, uses \code{NULL} ! Undefined control sequence. l.7859 ...s}}. The default, \code{NA}, uses \code {NULL} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7862 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7863 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7865 \begin{Details} \relax ! Undefined control sequence. l.7867 ...which is not numeric (according to \code {\LinkA{is.numeric}{is.num... ! Undefined control sequence. l.7867 ...s not numeric (according to \code{\LinkA {is.numeric}{is.numeric}}) is ! Undefined control sequence. l.7868 converted by \code {\LinkA{as.numeric}{as.numeric}} or, for S4 objects, ! Undefined control sequence. l.7868 converted by \code{\LinkA {as.numeric}{as.numeric}} or, for S4 objects, ! Undefined control sequence. l.7869 \code {\LinkA{as}{as}(, "numeric")}. If all columns are integer (after ! Undefined control sequence. l.7869 \code{\LinkA {as}{as}(, "numeric")}. If all columns are integer (after ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7872 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7874 \begin{Value} ! Undefined control sequence. l.7875 If \code {frame} inherits from class \code{"data.frame"}, an integer or ! Undefined control sequence. l.7875 If \code{frame} inherits from class \code {"data.frame"}, an integer or ! Undefined control sequence. l.7876 ...c matrix of the same dimensions as \code {frame}, with dimnames ! Undefined control sequence. l.7877 taken from the \code {row.names} (or \code{NULL}, depending on ! Undefined control sequence. l.7877 taken from the \code{row.names} (or \code {NULL}, depending on ! Undefined control sequence. l.7878 \code {rownames.force}) and \code{names}. ! Undefined control sequence. l.7878 \code{rownames.force}) and \code {names}. [78 [36 [42]] for immediate help. ... l.7881 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7883 \begin{Note} \relax ! Undefined control sequence. l.7884 ...ehaviour for data frames differs from \R {} < 2.5.0 which ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7886 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7888 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7893 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7895 \begin{SeeAlso} \relax ! Undefined control sequence. l.7896 \code {\LinkA{as.matrix}{as.matrix}}, ! Undefined control sequence. l.7896 \code{\LinkA {as.matrix}{as.matrix}}, ! Undefined control sequence. l.7897 \code {\LinkA{data.frame}{data.frame}}, ! Undefined control sequence. l.7897 \code{\LinkA {data.frame}{data.frame}}, ! Undefined control sequence. l.7898 \code {\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.7898 \code{\LinkA {matrix}{matrix}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7899 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7901 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7902 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7908 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help]. ... l.7909 \end{Examples} ! Undefined control sequence. l.7910 \HeaderA {date}{System Date and Time}{date} ! Undefined control sequence. l.7911 \keyword {utilities}{date} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7913 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7915 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7917 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7921 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7923 \begin{Value} ! Undefined control sequence. l.7924 The string has the form \code {"Fri Aug 20 11:11:00 1999"}, i.e., ! Undefined control sequence. l.7925 length 24, since it relies on POSIX's \code {ctime} ensuring the above ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7931 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7933 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7937 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7939 \begin{SeeAlso} \relax ! Undefined control sequence. l.7940 \code {\LinkA{Sys.Date}{Sys.Date}} and \code{\LinkA{Sys.time}{Sys.time... ! Undefined control sequence. l.7940 \code{\LinkA {Sys.Date}{Sys.Date}} and \code{\LinkA{Sys.time}{Sys.time... ! Undefined control sequence. l.7940 \code{\LinkA{Sys.Date}{Sys.Date}} and \code {\LinkA{Sys.time}{Sys.time... ! Undefined control sequence. l.7940 ...kA{Sys.Date}{Sys.Date}} and \code{\LinkA {Sys.time}{Sys.time}}; \co... ! Undefined control sequence. l.7940 ...\code{\LinkA{Sys.time}{Sys.time}}; \code {\LinkA{Date}{Date}} ! Undefined control sequence. l.7940 ...LinkA{Sys.time}{Sys.time}}; \code{\LinkA {Date}{Date}} ! Undefined control sequence. l.7942 \code {\LinkA{DateTimeClasses}{DateTimeClasses}} for objects represent... ! Undefined control sequence. l.7942 \code{\LinkA {DateTimeClasses}{DateTimeClasses}} for objects represent... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7943 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7945 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7946 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.7951 # # something similar in the current locale ! You can't use `macro parameter character #' in vertical mode. l.7951 ## something similar in the current locale ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7953 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7954 \end{Examples} ! Undefined control sequence. l.7955 \HeaderA {Dates}{Date Class}{Dates} ! Undefined control sequence. l.7956 \aliasA {as.data.frame.Date}{Dates}{as.data.frame.Date} ! Undefined control sequence. l.7957 \aliasA {as.list.Date}{Dates}{as.list.Date} ! Undefined control sequence. l.7958 \aliasA {c.Date}{Dates}{c.Date} ! Undefined control sequence. l.7959 \aliasA {Date}{Dates}{Date} ! Undefined control sequence. l.7960 \aliasA {Math.Date}{Dates}{Math.Date} ! Undefined control sequence. l.7961 \aliasA {mean.Date}{Dates}{mean.Date} ! Undefined control sequence. l.7962 \aliasA {print.Date}{Dates}{print.Date} ! Undefined control sequence. l.7963 \aliasA {split.Date}{Dates}{split.Date} ! Undefined control sequence. l.7964 \aliasA {Summary.Date}{Dates}{Summary.Date} ! Undefined control sequence. l.7965 \aliasA {summary.Date}{Dates}{summary.Date} ! Undefined control sequence. l.7966 \aliasA {[.Date}{Dates}{[.Date} ! Undefined control sequence. l.7967 \aliasA {[<\Rdash{}.Date}{Dates}{[<.Rdash..Date} ! Undefined control sequence. l.7967 \aliasA{[<\Rdash {}.Date}{Dates}{[<.Rdash..Date} ! Undefined control sequence. l.7968 \aliasA {[[.Date}{Dates}{[[.Date} ! Undefined control sequence. l.7969 \keyword {utilities}{Dates} ! Undefined control sequence. l.7970 \keyword {chron}{Dates} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7972 \begin{Description} \relax ! Undefined control sequence. l.7973 Description of the class \code {"Date"} representing calendar dates. ! LaTeX Error: \begin{do [43cument} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7974 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7976 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 []\OT1/cmr/m/n/10 something sim-i-lar in the cur-rent lo-cale for-mat(Sys.time( ), " Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 Dates-Date Class-Dates as.data.frame.DateDatesas.data.frame.Dat e Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 as.list.DateDatesas.list.Date c.DateDatesc.Date Date-Dates- Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 Date Math.DateDatesMath.Date mean.DateDatesmean.Date Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 print.DateDatesprint.Date split.DateDatessplit.Date Sum- Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 mary.DateDatesSummary.Date sum-mary.DateDatessummary.Date [.Dat e- Underfull \hbox (badness 10000) in paragraph at lines 7951--7977 \OT1/cmr/m/n/10 Dates[.Date [<.Date-Dates[<.Rdash..Date [[.Date-Dates[[.Date ut il-i-ties-Dates ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7981 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7983 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7984 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7985 \item[\code{object}] An object summarized. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7986 \item[\code{digits}] Number of significant digits for the computations. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7987 \item[\code{...}] Further arguments to be passed from or to other met... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7988 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7989 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7991 \begin{Details} \relax ! Undefined control sequence. l.8001 the \code {mean} method or by adding or subtracting (see ! Undefined control sequence. l.8002 \code {\LinkA{Ops.Date}{Ops.Date}}). ! Undefined control sequence. l.8002 \code{\LinkA {Ops.Date}{Ops.Date}}). ! Undefined control sequence. l.8004 The print methods respect \code {\LinkA{options}{options}("max.print")}. ! Undefined control sequence. l.8004 The print methods respect \code{\LinkA {options}{options}("max.print")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8005 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8007 \begin{SeeAlso} \relax ! Undefined control sequence. l.8008 \code {\LinkA{Sys.Date}{Sys.Date}} for the current date. ! Undefined control sequence. l.8008 \code{\LinkA {Sys.Date}{Sys.Date}} for the current date. ! Undefined control sequence. l.8010 \code {\LinkA{Ops.Date}{Ops.Date}} for operators on \code{"Date"} obje... ! Undefined control sequence. l.8010 \code{\LinkA {Ops.Date}{Ops.Date}} for operators on \code{"Date"} obje... [79]] ! Undefined control sequence. l.8010 ....Date}{Ops.Date}} for operators on \code {"Date"} objects. ! Undefined control sequence. l.8012 \code {\LinkA{format.Date}{format.Date}} for conversion to and from ch... ! Undefined control sequence. l.8012 \code{\LinkA {format.Date}{format.Date}} for conversion to and from ch... ! Undefined control sequence. l.8014 \code {\LinkA{axis.Date}{axis.Date}} and ! Undefined control sequence. l.8014 \code{\LinkA {axis.Date}{axis.Date}} and ! Undefined control sequence. l.8015 \code {\LinkA{hist.Date}{hist.Date}} for plotting. ! Undefined control sequence. l.8015 \code{\LinkA {hist.Date}{hist.Date}} for plotting. ! Undefined control sequence. l.8017 \code {\LinkA{weekdays}{weekdays}} for convenience extraction functions. ! Undefined control sequence. l.8017 \code{\LinkA {weekdays}{weekdays}} for convenience extraction functions. ! Undefined control sequence. l.8019 \code {\LinkA{seq.Date}{seq.Date}}, \code{\LinkA{cut.Date}{cut.Date}}, ! Undefined control sequence. l.8019 \code{\LinkA {seq.Date}{seq.Date}}, \code{\LinkA{cut.Date}{cut.Date}}, ! Undefined control sequence. l.8019 \code{\LinkA{seq.Date}{seq.Date}}, \code {\LinkA{cut.Date}{cut.Date}}, ! Undefined control sequence. l.8019 ...LinkA{seq.Date}{seq.Date}}, \code{\LinkA {cut.Date}{cut.Date}}, ! Undefined control sequence. l.8020 \code {\LinkA{round.Date}{round.Date}} for utility operations. ! Undefined control sequence. l.8020 \code{\LinkA {round.Date}{round.Date}} for utility operations. ! Undefined control sequence. l.8022 \code {\LinkA{DateTimeClasses}{DateTimeClasses}} for date-time classes. ! Undefined control sequence. l.8022 \code{\LinkA {DateTimeClasses}{DateTimeClasses}} for date-time classes. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8023 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8025 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8026 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.8030 ...eq(today, length.out=10, by="1 week")) # next ten weeks ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8034 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8035 \end{Examples} ! Undefined control sequence. l.8036 \HeaderA {DateTimeClasses}{Date-Time Classes}{DateTimeClasses} ! Undefined control sequence. l.8037 \aliasA {+.POSIXt}{DateTimeClasses}{+.POSIXt} ! Undefined control sequence. l.8038 \aliasA {-.POSIXt}{DateTimeClasses}{.Rdash..POSIXt} ! Undefined control sequence. l.8039 \aliasA {.leap.seconds}{DateTimeClasses}{.leap.seconds} ! Undefined control sequence. l.8040 \aliasA {anyNA.POSIXlt}{DateTimeClasses}{anyNA.POSIXlt} ! Undefined control sequence. l.8041 \aliasA {as.data.frame.POSIXct}{DateTimeClasses}{as.data.frame.POSIXct} ! Undefined control sequence. l.8042 \aliasA {as.data.frame.POSIXlt}{DateTimeClasses}{as.data.frame.POSIXlt} ! Undefined control sequence. l.8043 \aliasA {as.list.POSIXct}{DateTimeClasses}{as.list.POSIXct} ! Undefined control sequence. l.8044 \aliasA {as.matrix.POSIXlt}{DateTimeClasses}{as.matrix.POSIXlt} ! Undefined control sequence. l.8045 \aliasA {c.POSIXct}{DateTimeClasses}{c.POSIXct} ! Undefined control sequence. l.8046 \aliasA {c.POSIXlt}{DateTimeClasses}{c.POSIXlt} ! Undefined control sequence. l.8047 \aliasA {check\_tzones}{DateTimeClasses}{check.Rul.tzones} ! Undefined control sequence. l.8048 \aliasA {date-time}{DateTimeClasses}{date.Rdash.time} ! Undefined control sequence. l.8049 \aliasA {duplicated.POSIXlt}{DateTimeClasses}{duplicated.POSIXlt} ! Undefined control sequence. l.8050 \aliasA {is.na.POSIXlt}{DateTimeClasses}{is.na.POSIXlt} ! Undefined control sequence. l.8051 \aliasA {length.POSIXlt}{DateTimeClasses}{length.POSIXlt} ! Undefined control sequence. l.8052 \aliasA {Math.POSIXlt}{DateTimeClasses}{Math.POSIXlt} ! Undefined control sequence. l.8053 \aliasA {Math.POSIXt}{DateTimeClasses}{Math.POSIXt} ! Undefined control sequence. l.8054 \aliasA {mean.POSIXct}{DateTimeClasses}{mean.POSIXct} ! Undefined control sequence. l.8055 \aliasA {mean.POSIXlt}{DateTimeClasses}{mean.POSIXlt} ! Undefined control sequence. l.8056 \aliasA {names.POSIXlt}{DateTimeClasses}{names.POSIXlt} ! Undefined control sequence. l.8057 \aliasA {names<\Rdash{}.POSIXlt}{DateTimeClasses}{names<.Rdash..POSIXlt} ! Undefined control sequence. l.8057 \aliasA{names<\Rdash {}.POSIXlt}{DateTimeClasses}{names<.Rdash..POSIXlt} ! Undefined control sequence. l.8058 \aliasA {Ops.POSIXt}{DateTimeClasses}{Ops.POSIXt} ! Undefined control sequence. l.8059 \aliasA {POSIXct}{DateTimeClasses}{POSIXct} ! Undefined control sequence. l.8060 \aliasA {POSIXlt}{DateTimeClasses}{POSIXlt} ! Undefined control sequence. l.8061 \aliasA {POSIXt}{DateTimeClasses}{POSIXt} ! Undefined control sequence. l.8062 \aliasA {print.POSIXct}{DateTimeClasses}{print.POSIXct} ! Undefined control sequence. l.8063 \aliasA {print.POSIXlt}{DateTimeClasses}{print.POSIXlt} ! Undefined control sequence. l.8064 \aliasA {split.POSIXct}{DateTimeClasses}{split.POSIXct} ! Undefined control sequence. l.8065 \aliasA {str.POSIXt}{DateTimeClasses}{str.POSIXt} ! Undefined control sequence. l.8066 \aliasA {Summary.POSIXct}{DateTimeClasses}{Summary.POSIXct} ! Undefined control sequence. l.8067 \aliasA {summary.POSIXct}{DateTimeClasses}{summary.POSIXct} ! Undefined control sequence. l.8068 \aliasA {Summary.POSIXlt}{DateTimeClasses}{Summary.POSIXlt} ! Undefined control sequence. l.8069 \aliasA {summary.POSIXlt}{DateTimeClasses}{summary.POSIXlt} ! Undefined control sequence. l.8070 \aliasA {unique.POSIXlt}{DateTimeClasses}{unique.POSIXlt} ! Undefined control sequence. l.8071 \aliasA {[.POSIXct}{DateTimeClasses}{[.POSIXct} ! Undefined control sequence. l.8072 \aliasA {[.POSIXlt}{DateTimeClasses}{[.POSIXlt} ! Undefined control sequence. l.8073 \aliasA {[<\Rdash{}.POSIXct}{DateTimeClasses}{[<.Rdash..POSIXct} ! Undefined control sequence. l.8073 \aliasA{[<\Rdash {}.POSIXct}{DateTimeClasses}{[<.Rdash..POSIXct} ! Undefined control sequence. l.8074 \aliasA {[<\Rdash{}.POSIXlt}{DateTimeC [44lasses}{[<.Rdash..POSIXlt} ! Undefined control sequence. l.8074 \aliasA{[<\Rdash {}.POSIXlt}{DateTimeClasses}{[<.Rdash..POSIXlt} ! Undefined control sequence. l.8075 \aliasA {[[.POSIXct}{DateTimeClasses}{[[.POSIXct} ! Undefined control sequence. l.8076 \keyword {utilities}{DateTimeClasses} ! Undefined control sequence. l.8077 \keyword {chron}{DateTimeClasses} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8079 \begin{Description} \relax ! Undefined control sequence. l.8080 Description of the classes \code {"POSIXlt"} and \code{"POSIXct"} ! Undefined control sequence. l.8080 ...f the classes \code{"POSIXlt"} and \code {"POSIXct"} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8082 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8084 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 []\OT1/cmr/m/n/10 (today <- Sys.Date()) for-mat(today, "(ten-weeks <- Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 seq(today, length.out=10, by="1 week")) next ten weeks Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 week-days(today) months(tenweeks) as.Date(.leap.seconds) Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 DateTimeClassesDate-Time Class-es-Date-Time-Classes +.POSIXt-Da te- Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Time-Classes+.POSIXt -.POSIXtDateTimeClasses.Rdash..POSIXt Overfull \hbox (62.22298pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 .leap.secondsDateTimeClasses.leap.seconds anyNA.POSIXltDateTime ClassesanyNA.POSIXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 as.data.frame.POSIXctDateTimeClassesas.data.frame.POSIXct Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 as.data.frame.POSIXltDateTimeClassesas.data.frame.POSIXlt Overfull \hbox (105.44536pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 as.list.POSIXctDateTimeClassesas.list.POSIXct as.matrix.POSIXlt DateTimeClassesas.matrix.POSIXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 c.POSIXctDateTimeClassesc.POSIXct c.POSIXltDateTimeClassesc.POS IXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 check[]tzonesDateTimeClassescheck.Rul.tzones date- Overfull \hbox (70.5286pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 timeDateTimeClassesdate.Rdash.time du-pli-cated.POSIXltDateTime Classesduplicated.POSIXlt Overfull \hbox (64.61195pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 is.na.POSIXltDateTimeClassesis.na.POSIXlt length.POSIXltDateTim eClasseslength.POSIXlt Overfull \hbox (58.9453pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Math.POSIXltDateTimeClassesMath.POSIXlt Math.POSIXtDateTimeClas sesMath.POSIXt Overfull \hbox (66.72304pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 mean.POSIXctDateTimeClassesmean.POSIXct mean.POSIXltDateTimeCla ssesmean.POSIXlt Overfull \hbox (117.69536pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 names.POSIXltDateTimeClassesnames.POSIXlt names<.POSIXltDateTim eClassesnames<.Rdash..POSIXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Ops.POSIXtDateTimeClassesOps.POSIXt POSIX-ct-Date-Time- Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Class-es-POSIXct POSIXlt-Date-Time-Class-es-POSIXlt POSIXt-Date - Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Time-Class-es-POSIXt print.POSIXctDateTimeClassesprint.POSIXct Overfull \hbox (54.1119pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 print.POSIXltDateTimeClassesprint.POSIXlt split.POSIXctDateTime Classessplit.POSIXct Overfull \hbox (73.61195pt too wide) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 str.POSIXtDateTimeClassesstr.POSIXt Sum-mary.POSIXctDateTimeCla ssesSummary.POSIXct Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 sum-mary.POSIXctDateTimeClassessummary.POSIXct Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Sum-mary.POSIXltDateTimeClassesSummary.POSIXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 sum-mary.POSIXltDateTimeClassessummary.POSIXlt Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 unique.POSIXltDateTimeClassesunique.POSIXlt [.POSIX-ct-Date-Tim e- Underfull \hbox (badness 10000) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Classes[.POSIXct [.POSIXlt-Date-Time-Classes[.POSIXlt [<.POSIX- ct-Date- Underfull \hbox (badness 5189) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 Time-Classes[<.Rdash..POSIXct [<.POSIXlt-Date-Time-Classes[<.Rd ash..POSIXlt Underfull \hbox (badness 3690) in paragraph at lines 8028--8085 \OT1/cmr/m/n/10 [[.POSIX-ct-Date-Time-Classes[[.POSIXct util-i-ties-Date-Time-C lasses chron-Date- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8097 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8099 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8100 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8101 \item[\code{x, object}] an object to be printed or summarized from on... [80]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8103 \item[\code{tz, usetz}] for timezone formatting, passed to \code{\Lin... ! Undefined control sequence. l.8103 ...for timezone formatting, passed to \code {\LinkA{format.POSIXct}{fo... ! Undefined control sequence. l.8103 ...ezone formatting, passed to \code{\LinkA {format.POSIXct}{format.PO... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8104 \item[\code{digits}] number of significant digits for the computations: ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8107 \item[\code{...}] further arguments to be passed from or to other met... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8108 \item[\code{time}] date-time objects ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8109 \item[\code{time1, time2}] date-time objects or character vectors. (... ! Undefined control sequence. l.8110 vectors are converted by \code {\LinkA{as.POSIXct}{as.POSIXct}}.) ! Undefined control sequence. l.8110 vectors are converted by \code{\LinkA {as.POSIXct}{as.POSIXct}}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8111 \item[\code{z}] a numeric vector (in seconds) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8112 \item[\code{lop}] one of \code{==}, \code{!=}, \code{<}, \code{<=}, \... ! Undefined control sequence. l.8112 \item[\code{lop}] one of \code {==}, \code{!=}, \code{<}, \code{<=}, \... ! Undefined control sequence. l.8112 \item[\code{lop}] one of \code{==}, \code {!=}, \code{<}, \code{<=}, \... ! Undefined control sequence. l.8112 ...lop}] one of \code{==}, \code{!=}, \code {<}, \code{<=}, \code{>} ! Undefined control sequence. l.8112 ...of \code{==}, \code{!=}, \code{<}, \code {<=}, \code{>} ! Undefined control sequence. l.8112 ...}, \code{!=}, \code{<}, \code{<=}, \code {>} ! Undefined control sequence. l.8113 or \code {>=}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8114 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8115 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8117 \begin{Details} \relax ! Undefined control sequence. l.8118 ...asic classes of date/times. Class \code {"POSIXct"} ! Undefined control sequence. l.8120 ... zone) as a numeric vector. Class \code {"POSIXlt"} is ! Undefined control sequence. \code {sec} l.8124 \item[\code{sec}] 0--61: seconds. ! Undefined control sequence. \code {min} l.8125 \item[\code{min}] 0--59: minutes. ! Undefined control sequence. \code {hour} l.8126 \item[\code{hour}] 0--23: hours. ! Undefined control sequence. \code {mday} l.8127 \item[\code{mday}] 1--31: day of the month ! Undefined control sequence. \code {mon} l.8128 \item[\code{mon}] 0--11: months after the first of the year. ! Undefined control sequence. \code {year} l.8129 \item[\code{year}] years since 1900. ! Undefined control sequence. \code {wday} l.8130 \item[\code{wday}] 0--6 day of the week, starting on Sunday. ! Undefined control sequence. \code {yday} l.8131 \item[\code{yday}] 0--365: day of the year. ! Undefined control sequence. \code {isdst} l.8132 \item[\code{isdst}] Daylight Saving Time flag. Positive if in ! Undefined control sequence. \code {zone} l.8134 \item[\code{zone}] (Optional.) The abbreviation for the time zone in ! Undefined control sequence. l.8135 force at that time: \code {""} if unknown (but \code{""} might also ! Undefined control sequence. l.8135 ...at time: \code{""} if unknown (but \code {""} might also ! Undefined control sequence. \code {gmtoff} l.8137 \item[\code{gmtoff}] (Optional.) The offset in seconds from GMT: ! Undefined control sequence. l.8138 ...are East of the meridian. Usually \code {NA} if ! Undefined control sequence. l.8139 unknown, but \code {0} could mean unknown. ! Undefined control sequence. l.8145 \code {glibc} (including Linux and macOS) and those using the ! Undefined control sequence. l.8146 \code {tzcode} implementation shipped with \R{} (including Windows). But ! Undefined control sequence. l.8146 ...e{tzcode} implementation shipped with \R {} (including Windows). But ! Undefined control sequence. l.8149 \code {\LinkA{length}{length}(x)}, \code{\LinkA{print}{print}()} and \... ! Undefined control sequence. l.8149 \code{\LinkA {length}{length}(x)}, \code{\LinkA{print}{print}()} and \... ! Undefined control sequence. l.8149 \code{\LinkA{length}{length}(x)}, \code {\LinkA{print}{print}()} and \... ! Undefined control sequence. l.8149 ...\LinkA{length}{length}(x)}, \code{\LinkA {print}{print}()} and \cod... ! Undefined control sequence. l.8149 ... \code{\LinkA{print}{print}()} and \code {\LinkA{str}{str}}) ! Undefined control sequence. l.8149 ...\LinkA{print}{print}()} and \code{\LinkA {str}{str}}) ! Undefined control sequence. l.8150 ... abstract date-time vector, as for \code {"POSIXct"}. The ! Undefined control sequence. l.8152 time' (the \code {time\_t} data type) and `local time' (or ! Undefined control sequence. l.8153 broken-down time, the \code {struct tm} data type), from which they ! Undefined control sequence. l.8154 ...it their names. The components of \code {"POSIXlt"} are ! Undefined control sequence. l.8155 integer vectors, except \code {sec} and \code{zone}. ! Undefined control sequence. l.8155 ...ger vectors, except \code{sec} and \code {zone}. ! Undefined control sequence. l.8157 \code {"POSIXct"} is more convenient for including in data frames, and ! Undefined control sequence. l.8158 \code {"POSIXlt"} is closer to human-readable forms. A virtual class ! Undefined control sequence. l.8159 \code {"POSIXt"} exists from which both of the classes inherit: it is ! Undefined control sequence. l.8162 Components \code {wday} and \code{yday} of \code{"POSIXlt"} are for ! Undefined control sequence. l.8162 Components \code{wday} and \code {yday} of \code{"POSIXlt"} are for ! Undefined control sequence. l.8162 ...nts \code{wday} and \code{yday} of \code {"POSIXlt"} are for ! Undefined control sequence. l.8164 However, \code {isdst} is needed to distinguish times at the end of ! Undefined control sequence. l.8166 standard time. At all other times \code {isdst} can be deduced from [81 [45]] ! Undefined control sequence. l.8175 ...ime objects is equivalent to using \code {\LinkA{difftime}{difftime}}. ! Undefined control sequence. l.8175 ...ects is equivalent to using \code{\LinkA {difftime}{difftime}}. ! Undefined control sequence. l.8176 Be aware that \code {"POSIXlt"} objects will be interpreted as being in ! Undefined control sequence. l.8180 \code {"POSIXlt"} objects will often have an attribute \code{"tzone"}, ! Undefined control sequence. l.8180 ...jects will often have an attribute \code {"tzone"}, ! Undefined control sequence. l.8182 \env {TZ} environment variable and the names of the base time zone ! Undefined control sequence. l.8184 just be of length one, giving the \LinkA {time zone}{time zone} name. ! Undefined control sequence. l.8186 \code {"POSIXct"} objects may also have an attribute \code{"tzone"}, a ! Undefined control sequence. l.8186 ...objects may also have an attribute \code {"tzone"}, a ! Undefined control sequence. l.8188 ...w the object is converted to class \code {"POSIXlt"} and in ! Undefined control sequence. l.8191 ...me zone you may want to remove the \code {"tzone"} ! Undefined control sequence. l.8192 attribute (e.g., by \code {c(x)}). ! Undefined control sequence. l.8195 ...seconds (according to this version of \R {}'s data, ! Undefined control sequence. l.8199 extra seconds are in the object \code {.leap.seconds}). The details of ! Undefined control sequence. l.8203 corrected for at build time, so \code {"POSIXct"} times used by \R{} do ! Undefined control sequence. l.8203 ...me, so \code{"POSIXct"} times used by \R {} do ! Undefined control sequence. l.8206 Using \code {\LinkA{c}{c}} on \code{"POSIXlt"} objects converts them t... ! Undefined control sequence. l.8206 Using \code{\LinkA {c}{c}} on \code{"POSIXlt"} objects converts them t... ! Undefined control sequence. l.8206 Using \code{\LinkA{c}{c}} on \code {"POSIXlt"} objects converts them t... ! Undefined control sequence. l.8207 current time zone, and on \code {"POSIXct"} objects drops any ! Undefined control sequence. l.8208 \code {"tzone"} attributes (even if they are all marked with the same ! Undefined control sequence. l.8212 and real times such as \code {"2005-12-31 23:59:60"} are (probably) ! Undefined control sequence. l.8214 \R {}, and are unlikely to arise as input. Second, on some OSes there is ! Undefined control sequence. l.8215 ...lem in the POSIX/C99 standard with \code {"1969-12-31 23:59:59 UTC"}, ! Undefined control sequence. l.8216 which is \code {-1} in calendar time and that value is on those OSes ! Undefined control sequence. l.8217 also used as an error code. Thus \code {as.POSIXct("1969-12-31 ! Undefined control sequence. l.8219 \code {NA}, and hence \code{as.POSIXct("1969-12-31 23:59:59", ! Undefined control sequence. l.8219 \code{NA}, and hence \code {as.POSIXct("1969-12-31 23:59:59", ! Undefined control sequence. l.8220 tz = "UTC")} will give \code {"1969-12-31 23:59:00"}. Other OSes ! Undefined control sequence. l.8221 (including the code used by \R {} on Windows) report errors separately ! Undefined control sequence. l.8224 The print methods respect \code {\LinkA{options}{options}("max.print")}. ! Undefined control sequence. l.8224 The print methods respect \code{\LinkA {options}{options}("max.print")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8225 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8227 \begin{Section} {Sub-second Accuracy} ! Undefined control sequence. l.8228 Classes \code {"POSIXct"} and \code{"POSIXlt"} are able to express ! Undefined control sequence. l.8228 Classes \code{"POSIXct"} and \code {"POSIXlt"} are able to express ! Undefined control sequence. l.8233 \code {\LinkA{options}{options}("digits.secs")} is set: see \code{\Lin... ! Undefined control sequence. l.8233 \code{\LinkA {options}{options}("digits.secs")} is set: see \code{\Lin... ! Undefined control sequence. l.8233 ...tions}("digits.secs")} is set: see \code {\LinkA{strftime}{strftime}}. ! Undefined control sequence. l.8233 ..."digits.secs")} is set: see \code{\LinkA {strftime}{strftime}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8234 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8236 \begin{Section} {Valid ranges for times} ! Undefined control sequence. l.8237 The \code {"POSIXlt"} class can represent a very wide range of times (up [82] ! Undefined control sequence. l.8252 Most operating systems represent \code {POSIXct} times as C type ! Undefined control sequence. l.8253 \code {long}. This means that on 32-bit OSes this covers the period ! Undefined control sequence. l.8266 if \code {isdst} is positive or (if \code{-1}) if DST was predicted to ! Undefined control sequence. l.8266 if \code{isdst} is positive or (if \code {-1}) if DST was predicted to ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8277 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8279 \begin{Section} {Warnings} ! Undefined control sequence. l.8281 variable \env {TZ} set, yet have internal code that expects it (as does ! Undefined control sequence. l.8283 results try setting \env {TZ}. See \code{\LinkA{Sys.timezone}{Sys.tim... ! Undefined control sequence. l.8283 results try setting \env{TZ}. See \code {\LinkA{Sys.timezone}{Sys.tim... ! Undefined control sequence. l.8283 ... try setting \env{TZ}. See \code{\LinkA {Sys.timezone}{Sys.timezon... ! Undefined control sequence. l.8286 ...ed when comparing objects of class \code {"POSIXlt"}. ! Undefined control sequence. l.8291 ...h{order} of the list components of \code {"POSIXlt"} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8294 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8296 \begin{References} \relax ! Undefined control sequence. l.8298 \bold {1/2}, 8--11. ! Undefined control sequence. l.8299 \url {https://www.r-project.org/doc/Rnews/Rnews_2001-2.pdf} ! Missing $ inserted. $ l.8299 ...tps://www.r-project.org/doc/Rnews/Rnews_ 2001-2.pdf} ! Extra }, or forgotten $. l.8299 ...-project.org/doc/Rnews/Rnews_2001-2.pdf} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8300 \end{References} ! Missing $ inserted. $ l.8300 \end{References} ! Missing } inserted. } l.8300 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8302 \begin{SeeAlso} \relax ! Undefined control sequence. l.8303 \LinkA {Dates}{Dates} for dates without times. ! Undefined control sequence. l.8305 \code {\LinkA{as.POSIXct}{as.POSIXct} [46} and \code{\LinkA{as.POSIXlt}{as... ! Undefined control sequence. l.8305 \code{\LinkA {as.POSIXct}{as.POSIXct}} and \code{\LinkA{as.POSIXlt}{as... ! Undefined control sequence. l.8305 ...LinkA{as.POSIXct}{as.POSIXct}} and \code {\LinkA{as.POSIXlt}{as.POS... ! Undefined control sequence. l.8305 ...s.POSIXct}{as.POSIXct}} and \code{\LinkA {as.POSIXlt}{as.POSIXlt}} ... ! Undefined control sequence. l.8308 \code {\LinkA{strptime}{strptime}} for conversion to and from character ! Undefined control sequence. l.8308 \code{\LinkA {strptime}{strptime}} for conversion to and from character ! Undefined control sequence. l.8311 \code {\LinkA{Sys.time}{Sys.time}} for clock time as a \code{"POSIXct"... ! Undefined control sequence. l.8311 \code{\LinkA {Sys.time}{Sys.time}} for clock time as a \code{"POSIXct"... ! Undefined control sequence. l.8311 ...me}{Sys.time}} for clock time as a \code {"POSIXct"} object. ! Undefined control sequence. l.8313 \code {\LinkA{difftime}{difftime}} for time intervals. ! Undefined control sequence. l.8313 \code{\LinkA {difftime}{difftime}} for time intervals. ! Undefined control sequence. l.8315 \code {\LinkA{cut.POSIXt}{cut.POSIXt}}, \code{\LinkA{seq.POSIXt}{seq.P... ! Undefined control sequence. l.8315 \code{\LinkA {cut.POSIXt}{cut.POSIXt}}, \code{\LinkA{seq.POSIXt}{seq.P... ! Undefined control sequence. l.8315 ...e{\LinkA{cut.POSIXt}{cut.POSIXt}}, \code {\LinkA{seq.POSIXt}{seq.PO... ! Undefined control sequence. l.8315 ...A{cut.POSIXt}{cut.POSIXt}}, \code{\LinkA {seq.POSIXt}{seq.POSIXt}}, ! Undefined control sequence. l.8316 \code {\LinkA{round.POSIXt}{round.POSIXt}} and \code{\LinkA{trunc.POSI... ! Undefined control sequence. l.8316 \code{\LinkA {round.POSIXt}{round.POSIXt}} and \code{\LinkA{trunc.POSI... ! Undefined control sequence. l.8316 ...A{round.POSIXt}{round.POSIXt}} and \code {\LinkA{trunc.POSIXt}{trun... ! Undefined control sequence. l.8316 ....POSIXt}{round.POSIXt}} and \code{\LinkA {trunc.POSIXt}{trunc.POSIX... Underfull \hbox (badness 10000) in paragraph at lines 8315--8318 []\OT1/cmr/m/n/10 cut.POSIXtcut.POSIXt, seq.POSIXtseq.POSIXt, ! Undefined control sequence. l.8319 \code {\LinkA{weekdays}{weekdays}} for convenience extraction functions. ! Undefined control sequence. l.8319 \code{\LinkA {weekdays}{weekdays}} for convenience extraction functions. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8320 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8322 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8323 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.8325 (z <- Sys.time()) # the current date, as class "POSIXct" [83]] ! You can't use `macro parameter character #' in horizontal mode. l.8327 Sys.time() - 3600 # an hour ago ! You can't use `macro parameter character #' in horizontal mode. l.8329 as.POSIXlt(Sys.time(), "GMT") # the current time in GMT ! You can't use `macro parameter character #' in horizontal mode. l.8330 format(.leap.seconds) # the leap seconds in your time zone ! You can't use `macro parameter character #' in horizontal mode. l.8331 print(.leap.seconds, tz = "PST8PDT") # and in Seattle's Underfull \hbox (badness 5231) in paragraph at lines 8329--8332 []\OT1/cmr/m/n/10 as.POSIXlt(Sys.time(), "GMT") the cur-rent time in GMT for- ! You can't use `macro parameter character #' in vertical mode. l.8333 # # look at *internal* representation of "POSIXlt" : ! You can't use `macro parameter character #' in vertical mode. l.8333 ## look at *internal* representation of "POSIXlt" : ! You can't use `macro parameter character #' in horizontal mode. l.8336 # # str() "too smart" --> need unclass(.): ! You can't use `macro parameter character #' in horizontal mode. l.8336 ## str() "too smart" --> need unclass(.): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8338 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8339 \end{Examples} ! Undefined control sequence. l.8340 \HeaderA {dcf}{Read and Write Data in DCF Format}{dcf} ! Undefined control sequence. l.8341 \aliasA {read.dcf}{dcf}{read.dcf} ! Undefined control sequence. l.8342 \aliasA {write.dcf}{dcf}{write.dcf} ! Undefined control sequence. l.8343 \keyword {print}{dcf} ! Undefined control sequence. l.8344 \keyword {file}{dcf} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8346 \begin{Description} \relax ! Undefined control sequence. l.8347 Reads or writes an \R {} object from/to a file in Debian Control File ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8349 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8351 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 8333--8352 []\OT1/cmr/m/n/10 look at *in-ter-nal* rep-re-sen-ta-tion of "POSIXlt" : leapS <- Underfull \hbox (badness 1152) in paragraph at lines 8333--8352 \OT1/cmr/m/n/10 Data in DCF For-mat-dcf read.dcfdcfread.dcf write.dcfdcfwrite.d cf print-dcf ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8360 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8362 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8363 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8364 \item[\code{file}] either a character string naming a file or a \Link... ! Undefined control sequence. l.8364 ...aracter string naming a file or a \LinkA {connection}{connection}. ! Undefined control sequence. l.8365 \code {""} indicates output to the console. For \code{read.dcf} this ! Undefined control sequence. l.8365 ...icates output to the console. For \code {read.dcf} this ! Undefined control sequence. l.8366 can name a compressed file (see \code {\LinkA{gzfile}{gzfile}}). ! Undefined control sequence. l.8366 ...name a compressed file (see \code{\LinkA {gzfile}{gzfile}}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8367 \item[\code{fields}] Fields to read from the DCF file. Default is to... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8369 \item[\code{all}] a logical indicating whether in case of multiple ! Undefined control sequence. l.8371 If \code {all} is false (default), only the last such occurrence is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8373 \item[\code{keep.white}] a character string with the names of the fie... ! Undefined control sequence. l.8374 ...hitespace should be kept as is, or \code {NULL} (default) ! Undefined control sequence. l.8377 \code {read.dcf} removes leading and trailing whitespace, and ! Undefined control sequence. l.8378 \code {write.dcf} folds using \code{\LinkA{strwrap}{strwrap}}. ! Undefined control sequence. l.8378 \code{write.dcf} folds using \code {\LinkA{strwrap}{strwrap}}. ! Undefined control sequence. l.8378 \code{write.dcf} folds using \code{\LinkA {strwrap}{strwrap}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8380 \item[\code{x}] the object to be written, typically a data frame. If... ! Undefined control sequence. l.8381 is attempted to coerce \code {x} to a data frame. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Compan [47ion for explanation. Type H for immediate help. ... l.8382 \item[\code{append}] logical. If \code{TRUE}, the output is appended... ! Undefined control sequence. l.8382 \item[\code{append}] logical. If \code {TRUE}, the output is appended... ! Undefined control sequence. l.8383 file. If \code {FALSE}, any existing file of the name is destroyed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8384 \item[\code{indent}] a positive integer specifying the indentation for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8386 \item[\code{width}] a positive integer giving the target column for w... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8388 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8389 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8391 \begin{Details} \relax ! Undefined control sequence. l.8394 various places to store \R {} system information, like descriptions and ! Undefined control sequence. l.8397 The DCF rules as implemented in \R {} are: ! Undefined control sequence. l.8404 \item Regular lines are of form \code {tag:value}, i.e., have a name ! Undefined control sequence. l.8405 ... value for the field, separated by \code {:} (only the first ! Undefined control sequence. l.8406 \code {:} counts). The value can be empty (i.e., whitespace only). ! Undefined control sequence. l.8410 character is a \samp {.} are taken as blank lines (allowing for [84]] ! Undefined control sequence. l.8414 ...may not be arbitrarily long; prior to \R {} 3.0.2 the ! Undefined control sequence. l.8420 Note that \code {read.dcf(all = FALSE)} reads the file byte-by-byte. ! Undefined control sequence. l.8421 This allows a \file {DESCRIPTION} file to be read and only its ASCII ! Undefined control sequence. l.8422 fields used, or its \samp {Encoding} field used to re-encode the ! Undefined control sequence. l.8425 \code {write.dcf} does not write \code{NA} fields. ! Undefined control sequence. l.8425 \code{write.dcf} does not write \code {NA} fields. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8426 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8428 \begin{Value} ! Undefined control sequence. l.8429 The default \code {read.dcf(all = FALSE)} returns a character matrix ! Undefined control sequence. l.8432 listed in \code {keep.white}. If a tag name is specified in the file, ! Undefined control sequence. l.8434 ...ag name of a field is specified in \code {fields} ! Undefined control sequence. l.8435 ...d, then the corresponding value is \code {NA}. ! Undefined control sequence. l.8439 For \code {read.dcf(all = TRUE)} a data frame is returned, again with ! Undefined control sequence. l.8444 Note that an empty \code {file} is a valid DCF file, and ! Undefined control sequence. l.8445 \code {read.dcf} will return a zero-row matrix or data frame. ! Undefined control sequence. l.8447 For \code {write.dcf}, invisible \code{NULL}. ! Undefined control sequence. l.8447 For \code{write.dcf}, invisible \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8448 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8450 \begin{Note} \relax ! Undefined control sequence. l.8451 As from \R {} 3.4.0, `whitespace' in all cases includes newlines. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8452 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8454 \begin{References} \relax ! Undefined control sequence. l.8455 \url {https://www.debian.org/doc/debian-policy/ch-controlfields.html}. Underfull \hbox (badness 1303) in paragraph at lines 8447--8456 []\OT1/cmr/m/n/10 For write.dcf, in-vis-i-ble NULL. As from 3.4.0, `whites-pa ce' in all ! Undefined control sequence. l.8457 Note that \R {} does not require encoding in UTF-8, which is a recent ! Undefined control sequence. l.8459 ...allows comment lines starting with \samp {\#}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8460 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8462 \begin{SeeAlso} \relax ! Undefined control sequence. l.8463 \code {\LinkA{write.table}{write.table}}. ! Undefined control sequence. l.8463 \code{\LinkA {write.table}{write.table}}. ! Undefined control sequence. l.8465 \code {\LinkA{available.packages}{available.packages}}, which uses \co... ! Undefined control sequence. l.8465 \code{\LinkA {available.packages}{available.packages}}, which uses \co... ! Undefined control sequence. l.8465 ...}{available.packages}}, which uses \code {read.dcf} to read ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8467 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8469 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8470 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.8472 # # Create a reduced version of the DESCRIPTION file in package 'splines' ! You can't use `macro parameter character #' in vertical mode. l.8472 ## Create a reduced version of the DESCRIPTION file in package 'splines' ! You can't use `macro parameter character #' in vertical mode. l.8477 # # An online DCF file with multiple records ! You can't use `macro parameter character #' in vertical mode. l.8477 ## An online DCF file with multiple records ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8482 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8483 \end{Examples} ! Undefined control sequence. l.8484 \HeaderA {debug}{Debug a Function}{debug} ! Undefined control sequence. l.8485 \aliasA {debuggingState}{debug}{debuggingState} ! Undefined control sequence. l.8486 \aliasA {debugonce}{debug}{debugonce} ! Undefined control sequence. l.8487 \aliasA {isdebugged}{debug}{isdebugged} ! Undefined control sequence. l.8488 \aliasA {undebug}{debug}{undebug} ! Undefined control sequence. l.8489 \keyword {programming}{debug} ! Undefined control sequence. l.8490 \keyword {environment}{debug} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8492 \begin{Description} \relax ! Undefined control sequence. l.8494 The \code {text} and \code{condition} arguments are the same as those ! Undefined control sequence. l.8494 The \code{text} and \code {condition} arguments are the same as those ! Undefined control sequence. l.8495 that can be supplied via a call to \code {browser}. They can be retrieved ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8498 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8500 \begin{Usage} Underfull \hbox (badness 1571) in paragraph at lines 8477--8501 []\OT1/cmr/m/n/10 An on-line DCF file with mul-ti-ple records con <- url("http: //cran.r- Underfull \hbox (badness 4156) in paragraph at lines 8477--8501 \OT1/cmr/m/n/10 project.org/src/contrib/PACKAGES") y <- read.dcf(con, all = TRU E) [85 [48] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8508 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8510 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8511 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8512 \item[\code{fun}] any interpreted \R{} function. ! Undefined control sequence. l.8512 \item[\code{fun}] any interpreted \R {} function. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8513 \item[\code{text}] a text string that can be retrieved when the brows... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8514 \item[\code{condition}] a condition that can be retrieved when the br... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8516 \item[\code{signature}] an optional method signature. If specified, the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8518 \item[\code{on}] logical; a call to the support function ! Undefined control sequence. l.8519 \code {debuggingState} returns \code{TRUE} if debugging is globally ! Undefined control sequence. l.8519 \code{debuggingState} returns \code {TRUE} if debugging is globally ! Undefined control sequence. l.8520 turned on, \code {FALSE} otherwise. An argument of one or the other ! Undefined control sequence. l.8522 \code {FALSE}, none of the debugging actions will occur (but explicit ! Undefined control sequence. l.8523 \code {\LinkA{browser}{browser}} calls in functions will continue to w... ! Undefined control sequence. l.8523 \code{\LinkA {browser}{browser}} calls in functions will continue to w... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8525 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.8526 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8528 \begin{Details} \relax ! Undefined control sequence. l.8534 ...prompt the user can enter commands or \R {} expressions, ! Undefined control sequence. l.8536 \code {\LinkA{browser}{browser}} help topic. ! Undefined control sequence. l.8536 \code{\LinkA {browser}{browser}} help topic. ! Undefined control sequence. l.8540 \code {debug} on its name. ! Undefined control sequence. l.8543 use \code {\LinkA{trace}{trace}(..., at = *)} or \code{\LinkA{setBreak... ! Undefined control sequence. l.8543 use \code{\LinkA {trace}{trace}(..., at = *)} or \code{\LinkA{setBreak... ! Undefined control sequence. l.8543 ...nkA{trace}{trace}(..., at = *)} or \code {\LinkA{setBreakpoint}{set... ! Undefined control sequence. l.8543 ...ce}{trace}(..., at = *)} or \code{\LinkA {setBreakpoint}{setBreakpo... ! Undefined control sequence. l.8545 Using \code {debug} is persistent, and unless debugging is turned off ! Undefined control sequence. l.8548 Use \code {debugonce} to enter the debugger only the next time the ! Undefined control sequence. l.8552 \code {signature}. When specified, signature indicates the method of ! Undefined control sequence. l.8553 \code {fun} to be debugged. Note that debugging is implemented slightly ! Undefined control sequence. l.8555 the debugging bit. As such, \code {text} and \code{condition} cannot be ! Undefined control sequence. l.8555 ...ging bit. As such, \code{text} and \code {condition} cannot be ! Undefined control sequence. l.8556 ...ied in combination with a non-null \code {signature}. For methods ! Undefined control sequence. l.8557 which implement the \code {.local} rematching mechanism, the ! Undefined control sequence. l.8558 \code {.local} closure itself is the one that will be ultimately ! Undefined control sequence. l.8559 debugged (see \code {\LinkA{isRematched}{isRematched}}). ! Undefined control sequence. l.8559 debugged (see \code{\LinkA {isRematched}{isRematched}}). ! Undefined control sequence. l.8561 \code {isdebugged} returns \code{TRUE} if a) \code{signature} is \code... ! Undefined control sequence. l.8561 \code{isdebugged} returns \code {TRUE} if a) \code{signature} is \code... ! Undefined control sequence. l.8561 ...ebugged} returns \code{TRUE} if a) \code {signature} is \code{NULL} ! Undefined control sequence. l.8561 ...de{TRUE} if a) \code{signature} is \code {NULL} ! Undefined control sequence. l.8562 and the closure \code {fun} has been debugged, or b) \code{signature} ... ! Undefined control sequence. l.8562 ...code{fun} has been debugged, or b) \code {signature} is not ! Undefined control sequence. l.8563 \code {NULL}, \code{fun} is an S4 generic, and the method of \code{fun} ! Undefined control sequence. l.8563 \code{NULL}, \code {fun} is an S4 generic, and the method of \code{fun} ! Undefined control sequence. l.8563 ...s an S4 generic, and the method of \code {fun} ! Undefined control sequence. l.8565 \code {FALSE}. ! Undefined control sequence. l.8569 \code {\LinkA{options}{options}(deparse.max.lines)}. ! Undefined control sequence. l.8569 \code{\LinkA {options}{options}(deparse.max.lines)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8574 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8576 \begin{Value} ! Undefined control sequence. l.8577 \code {debug} and \code{undebug} invisibly return \code{NULL}. ! Undefined control sequence. l.8577 \code{debug} and \code {undebug} invisibly return \code{NULL}. ! Undefined control sequence. l.8577 ...nd \code{undebug} invisibly return \code {NULL}. ! Undefined control sequence. l.8579 \code {isdebugged} returns \code{TRUE} if the function or method is ! Undefined control sequence. l.8579 \code{isdebugged} returns \code {TRUE} if the function or method is ! Undefined control sequence. l.8580 marked for debugging, and \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8581 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8583 \begin{SeeAlso} \relax ! Undefined control sequence. l.8584 \code {\LinkA{debugcall}{debugcall}} for conveniently debugging methods, ! Undefined control sequence. l.8584 \code{\LinkA {debugcall}{debugcall}} for conveniently debugging methods, ! Undefined control sequence. l.8585 \code {\LinkA{browser}{browser}}, \code{\LinkA{trace}{trace}}; ! Undefined control sequence. l.8585 \code{\LinkA {browser}{browser}}, \code{\LinkA{trace}{trace}}; ! Undefined control sequence. l.8585 \code{\LinkA{browser}{browser}}, \code {\LinkA{trace}{trace}}; ! Undefined control sequence. l.8585 ...{\LinkA{browser}{browser}}, \code{\LinkA {trace}{trace}}; ! Undefined control sequence. l.8586 \code {\LinkA{traceback}{traceback}} to see the stack after an \code{E... ! Undefined control sequence. l.8586 \code{\LinkA {traceback}{traceback}} to see the stack after an \code{E... ! Undefined control sequence. l.8586 ...ceback}} to see the stack after an \code {Error: ...} ! Undefined control sequence. l.8587 message; \code {\LinkA{recover}{recover}} for another debugging approach. ! Undefined control sequence. l.8587 message; \code{\LinkA {recover}{recover}} for another debugging approach. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8588 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8590 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8591 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.8592 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.8592 ## Not run: ! You can't use `macro parameter character #' in vertical mode. l.8596 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.8596 ## End(Not run) [86 [49] ! You can't use `macro parameter character #' in horizontal mode. l.8597 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.8597 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.8599 # # only the first call will be debugged ! You can't use `macro parameter character #' in horizontal mode. l.8599 ## only the first call will be debugged ! You can't use `macro parameter character #' in vertical mode. l.8603 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.8603 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8604 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8605 \end{Examples} ! Undefined control sequence. l.8606 \HeaderA {Defunct}{Marking Objects as Defunct}{Defunct} ! Undefined control sequence. l.8607 \aliasA {.Defunct}{Defunct}{.Defunct} ! Undefined control sequence. l.8608 \aliasA {defunct}{Defunct}{defunct} ! Undefined control sequence. l.8609 \keyword {documentation}{Defunct} ! Undefined control sequence. l.8610 \keyword {utilities}{Defunct} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8612 \begin{Description} \relax ! Undefined control sequence. l.8613 When a function is removed from \R {} it should be replaced by a function ! Undefined control sequence. l.8614 which calls \code {.Defunct}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8615 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8617 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8621 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8623 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8624 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8625 \item[\code{new}] ! LaTeX Error: Lonely \item--perhaps a missing list] environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8628 \item[\code{package}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8632 \item[\code{msg}] ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8636 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8637 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8639 \begin{Details} \relax ! Undefined control sequence. l.8640 \code {.Defunct} is called from defunct functions. Functions should be ! Undefined control sequence. l.8641 listed in \code {help("pkg-defunct")} for an appropriate \code{pkg}, ! Undefined control sequence. l.8641 ..."pkg-defunct")} for an appropriate \code {pkg}, ! Undefined control sequence. l.8642 including \code {base} (with the alias added to the respective Rd ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8644 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8646 \begin{SeeAlso} \relax ! Undefined control sequence. l.8647 \code {\LinkA{Deprecated}{Deprecated}}. ! Undefined control sequence. l.8647 \code{\LinkA {Deprecated}{Deprecated}}. ! Undefined control sequence. l.8649 \code {base-defunct} and so on which list the defunct functions ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8651 \end{SeeAlso} ! Undefined control sequence. l.8652 \HeaderA {delayedAssign}{Delay Evaluation}{delayedAssign} ! Undefined control sequence. l.8653 \aliasA {promise}{delayedAssign}{promise} ! Undefined control sequence. l.8654 \aliasA {promises}{delayedAssign}{promises} ! Undefined control sequence. l.8655 \keyword {programming}{delayedAssign} ! Undefined control sequence. l.8656 \keyword {data}{delayedAssign} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8658 \begin{Description} \relax ! Undefined control sequence. l.8659 \code {delayedAssign} creates a \emph{promise} to evaluate the given ! Undefined control sequence. l.8661 ...ph{lazy evaluation} mechanism used by \R {} for the evaluation ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8663 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8665 \begin{Usage} Underfull \hbox (badness 1242) in paragraph at lines 8649--8666 \OT1/cmr/m/n/10 promise promis-es-de-layedAs-sign-promises pro-gram-mingde-laye dAs-sign datade- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8670 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8672 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8673 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8674 \item[\code{x}] a variable name (given as a quoted string in the func... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8675 \item[\code{value}] an expression to be assigned to \code{x} ! Undefined control sequence. l.8675 ...}] an expression to be assigned to \code {x} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8676 \item[\code{eval.env}] an environment in which to evaluate \code{value} ! Undefined control sequence. l.8676 ...n environment in which to evaluate \code {value} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8677 \item[\code{assign.env}] an environment in which to assign \code{x} ! Undefined control sequence. l.8677 ... an environment in which to assign \code {x} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8678 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8679 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8681 \begin{Details} \relax ! Undefined control sequence. l.8682 Both \code {eval.env} and \code{assign.env} default to the currently a... ! Undefined control sequence. l.8682 Both \code{eval.env} and \code {assign.env} default to the currently a... ! Undefined control sequence. l.8685 ...xpression assigned to a promise by \code {delayedAssign} will ! Undefined control sequence. l.8690 environment specified by \code {eval.env} (whose contents may have cha... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8693 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8695 \begin{Value} ! Undefined control sequence. l.8697 a promise to evaluate \code {value} to the variable \code{x}. ! Undefined control sequence. l.8697 ...luate \code{value} to the variable \code {x}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8698 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8700 \begin{SeeAlso} \relax ! Undefined control sequence. l.8701 \code {\LinkA{substitute}{substitute}}, to see the expression associat... ! Undefined control sequence. l.8701 \code{\LinkA {substitute}{substitute}}, to see the expression associat... ! Undefined control sequence. l.8702 promise, if \code {assign.env} is not the \code{\LinkA{.GlobalEnv}{.Gl... ! Undefined control sequence. l.8702 ...e, if \code{assign.env} is not the \code {\LinkA{.GlobalEnv}{.Globa... ! Undefined control sequence. l.8702 ...code{assign.env} is not the \code{\LinkA {.GlobalEnv}{.GlobalEnv}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8703 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8705 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8706 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.8709 substitute(x) # shows only 'x', as it is in the global env. ! You can't use `macro parameter character #' in horizontal mode. l.8711 x # new! ! Undefined control sequence. l.8715 cat("yippee!\n ") ! Missing $ inserted. $ l.8719 x^ 2 #- yippee ! You can't use `macro parameter character #' in math mode. l.8719 x^2 # - yippee ! You can't use `macro parameter character #' in math mode. l.8720 x^2 # - simple number ! Missing $ inserted. $ l.8721 ! You can't use `macro parameter character #' in horizontal mode. l.8724 # # See the promise {without "forcing" (i.e. evaluating) it}: ! You can't use `macro parameter character #' in horizontal mode. l.8724 ## See the promise {without "forcing" (i.e. evaluating) it}: ! You can't use `macro parameter character #' in horizontal mode. l.8725 substitute(x, ne) # 'pi + 2' ! You can't use `macro parameter character #' in vertical mode. l.8728 # ## Promises in an environment [for advanced users]: ---------------... ! You can't use `macro parameter character #' in vertical mode. l.8728 ## # Promises in an environment [for advanced users]: ---------------... ! You can't use `macro parameter character #' in vertical mode. l.8728 ### Promises in an environment [for advanced users]: ---------------... ! Undefined control sequence. l.8730 ...z) environment())(cos, "y", {cat(" HO!\n "); pi+2}) ! You can't use `macro parameter character #' in horizontal mode. l.8731 # # How can we look at all promises in an env (w/o forcing them)? ! You can't use `macro parameter character #' in horizontal mode. l.8731 ## How can we look at all promises in an env (w/o forcing them)? ! Missing $ inserted. $ l.8732 gete <- function(e_ ) ! Missing $ inserted. $ l.8735 Overfull \hbox (70.73505pt too wide) in paragraph at lines 8730--8735 \OT1/cmr/m/n/10 function(e$[]\OML/cmm/m/it/10 lapply\OT1/cmr/m/n/10 (\OML/cmm/m /it/10 lapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ls\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 e[]; as:name\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; function\OT1/cmr/m/n/10 (\O ML/cmm/m/it/10 n\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 eval\OT1/cmr/m/n/10 (\OML/cmm /m/it/10 substitute\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 substitute\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 X; e[]; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 X \OT1/cmr/m/n/ 10 = [87 [50] ! You can't use `macro parameter character #' in horizontal mode. l.8739 (le <- as.list(e)) # evaluates ("force"s) the promises ! You can't use `macro parameter character #' in horizontal mode. l.8740 ...tical(unname(le), lapply(exps, eval))) # and another "Ho!" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8741 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8742 \end{Examples} ! Undefined control sequence. l.8743 \HeaderA {deparse}{Expression Deparsing}{deparse} ! Undefined control sequence. l.8744 \keyword {programming}{deparse} ! Undefined control sequence. l.8745 \keyword {manip}{deparse} ! Undefined control sequence. l.8746 \keyword {data}{deparse} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8748 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8750 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8752 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 8739--8753 []\OT1/cmr/m/n/10 (le <- as.list(e)) eval-u-ates ("force"s) the promises Underfull \hbox (badness 2875) in paragraph at lines 8739--8753 \OT1/cmr/m/n/10 stopifnot(identical(unname(le), lap-ply(exps, eval))) and an-o ther "Ho!" Underfull \hbox (badness 10000) in paragraph at lines 8739--8753 \OT1/cmr/m/n/10 de-parse-Ex-pres-sion De-pars-ingde-parse pro-gram-mingde-parse ma-nipde-parse ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8760 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8762 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8763 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8764 \item[\code{expr}] any \R{} expression. ! Undefined control sequence. l.8764 \item[\code{expr}] any \R {} expression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Comp]anion for explanation. Type H for immediate help. ... l.8765 \item[\code{width.cutoff}] integer in \eqn{[20, 500]}{} determining t... ! Undefined control sequence. l.8765 \item[\code{width.cutoff}] integer in \eqn {[20, 500]}{} determining t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8767 \item[\code{backtick}] logical indicating whether symbolic names shou... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8769 \item[\code{control}] character vector of deparsing options. See ! Undefined control sequence. l.8770 \code {\LinkA{.deparseOpts}{.deparseOpts}}. ! Undefined control sequence. l.8770 \code{\LinkA {.deparseOpts}{.deparseOpts}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8771 \item[\code{nlines}] integer: the maximum number of lines to produce. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8773 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8774 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8776 \begin{Details} \relax ! Undefined control sequence. l.8779 \code {"expression"} used in \code{\LinkA{expression}{expression}}) in... ! Undefined control sequence. l.8779 \code{"expression"} used in \code {\LinkA{expression}{expression}}) in... ! Undefined control sequence. l.8779 \code{"expression"} used in \code{\LinkA {expression}{expression}}) in... ! Undefined control sequence. l.8780 strings (a kind of inverse to \code {\LinkA{parse}{parse}}). ! Undefined control sequence. l.8780 strings (a kind of inverse to \code{\LinkA {parse}{parse}}). ! Undefined control sequence. l.8784 the functions \code {deparse} and \code{substitute} to create labels ! Undefined control sequence. l.8784 the functions \code{deparse} and \code {substitute} to create labels ! Undefined control sequence. l.8786 to the function \code {myplot}. ! Undefined control sequence. l.8788 The default for the \code {backtick} option is not to quote single ! Undefined control sequence. l.8792 Using \code {control = "all"} comes closest to making \code{deparse()} ! Undefined control sequence. l.8792 ...l = "all"} comes closest to making \code {deparse()} ! Undefined control sequence. l.8793 an inverse of \code {parse()}. However, not all objects are ! Undefined control sequence. l.8798 see \code {\LinkA{as.character}{as.character}} for more details. ! Undefined control sequence. l.8798 see \code{\LinkA {as.character}{as.character}} for more details. ! Undefined control sequence. l.8800 \code {width.cutoff} is a lower bound for the line lengths: deparsing a ! Undefined control sequence. l.8801 line proceeds until at least \code {width.cutoff} \emph{bytes} have ! Undefined control sequence. l.8802 been output and e.g.~\code {arg = value} expressions will not be split ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8804 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8806 \begin{Note} \relax ! Undefined control sequence. l.8812 graphics display list recorded by \code {\LinkA{recordPlot}{recordPlot... ! Undefined control sequence. l.8812 ...cs display list recorded by \code{\LinkA {recordPlot}{recordPlot}} ... ! Undefined control sequence. l.8813 intended to be deparsed and \code {.Internal} calls will be shown as ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8815 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8817 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8821 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8823 \begin{SeeAlso} \relax ! Undefined control sequence. l.8824 \code {\LinkA{substitute}{substitute}}, ! Undefined control sequence. l.8824 \code{\LinkA {substitute}{substitute}}, ! Undefined control sequence. l.8825 \code {\LinkA{parse}{parse}}, ! Undefined control sequence. l.8825 \code{\LinkA {parse}{parse}}, ! Undefined control sequence. l.8826 \code {\LinkA{expression}{expression}}. ! Undefined control sequence. l.8826 \code{\LinkA {expression}{expression}}. ! Undefined control sequence. l.8828 \code {Quotes} for quoting conventions, including backticks. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8829 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8831 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8832 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8848 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8849 \end{Examples} ! Undefined control sequence. l.8850 \HeaderA {deparseOpts}{Options for Expression Deparsing}{deparseOpts} ! Undefined control sequence. l.8851 \aliasA {.deparseOpts}{deparseOpts}{.deparseOpts} ! Undefined control sequence. l.8852 \keyword {programming}{deparseOpts} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8854 \begin{Description} \relax ! Undefined control sequence. l.8855 Process the deparsing options for \code {deparse}, \code{dput} and ! Undefined control sequence. l.8855 ...arsing options for \code{deparse}, \code {dput} and ! Undefined control sequence. l.8856 \code {dump}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8857 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8859 \begin{Usage} [88 Overfull \hbox (32.24495pt too wide) in paragraph at lines 4536--4536 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4538--4538 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4539--4539 [] @texttt if(jvn < 1.8) stop("Java 8 is needed for this package but not avai lable")[] [51] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8863 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8865 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8866 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8867 \item[\code{control}] character vector of deparsing options. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8868 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8869 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8871 \begin{Details} \relax ! Undefined control sequence. l.8872 This is called by \code {\LinkA{deparse}{deparse}}, \code{\LinkA{dput}... ! Undefined control sequence. l.8872 This is called by \code{\LinkA {deparse}{deparse}}, \code{\LinkA{dput}... ! Undefined control sequence. l.8872 ...y \code{\LinkA{deparse}{deparse}}, \code {\LinkA{dput}{dput}} and ! Undefined control sequence. l.8872 ...{\LinkA{deparse}{deparse}}, \code{\LinkA {dput}{dput}} and ! Undefined control sequence. l.8873 \code {\LinkA{dump}{dump}} to process their \code{control} argument. ! Undefined control sequence. l.8873 \code{\LinkA {dump}{dump}} to process their \code{control} argument. ! Undefined control sequence. l.8873 ...inkA{dump}{dump}} to process their \code {control} argument. ! Undefined control sequence. l.8875 The \code {control} argument is a vector containing zero or more of the ! Undefined control sequence. \code {keepInteger} l.8879 \item[\code{keepInteger}] ! Undefined control sequence. l.8880 Either surround integer vectors by \code {as.integer()} or use ! Undefined control sequence. l.8881 suffix \code {L}, so they are not converted to type double when ! Undefined control sequence. l.8882 ... includes making sure that integer \code {NA}s are ! Undefined control sequence. l.8883 preserved (via \code {NA\_integer\_} if there are no non-\code{NA} ! Undefined control sequence. l.8883 ...NA\_integer\_} if there are no non-\code ] {NA} ! Undefined control sequence. l.8884 values in the vector, unless \code {"S\_compatible"} is set). ! Undefined control sequence. \code {quoteExpressions} l.8886 \item[\code{quoteExpressions}] ! Undefined control sequence. l.8887 Surround expressions with \code {quote()}, so they are not ! Undefined control sequence. \code {showAttributes} l.8890 \item[\code{showAttributes}] ! Undefined control sequence. l.8891 ...bject has attributes (other than a \code {source} ! Undefined control sequence. l.8892 attribute), use \code {structure()} to display them as well as the ! Undefined control sequence. l.8893 ...ct value. This is the default for \code {\LinkA{deparse}{deparse}}... ! Undefined control sequence. l.8893 ...e. This is the default for \code{\LinkA {deparse}{deparse}} and ! Undefined control sequence. l.8894 \code {\LinkA{dput}{dput}}. ! Undefined control sequence. l.8894 \code{\LinkA {dput}{dput}}. ! Undefined control sequence. \code {useSource} l.8896 \item[\code{useSource}] ! Undefined control sequence. l.8897 If the object has a \code {source} attribute, display that instead ! Undefined control sequence. \code {warnIncomplete} l.8901 \item[\code{warnIncomplete}] ! Undefined control sequence. l.8902 Some exotic objects such as \LinkA {environment}{environment}s, external ! Undefined control sequence. l.8907 Also, the parser in \R {} < 2.7.0 would only accept strings of up to ! Undefined control sequence. \code {keepNA} l.8910 \item[\code{keepNA}] ! Undefined control sequence. l.8911 Integer, real and character \code {NA}s are surrounded by coercion ! Undefined control sequence. l.8913 same type. Since e.g.~\code {NA\_real\_} can be output in \R{}, this is ! Undefined control sequence. l.8913 ...g.~\code{NA\_real\_} can be output in \R {}, this is ! Undefined control sequence. l.8914 mainly used in connection with \code {S\_compatible}. ! Undefined control sequence. \code {all} l.8916 \item[\code{all}] ! Undefined control sequence. l.8918 ...ed above. This is the default for \code {dump}, and the options ! Undefined control sequence. l.8919 used by \code {\LinkA{edit}{edit}} (which are fixed). ! Undefined control sequence. l.8919 used by \code{\LinkA {edit}{edit}} (which are fixed). ! Undefined control sequence. \code {delayPromises} l.8921 \item[\code{delayPromises}] ! Undefined control sequence. \code {S\_compatible} l.8926 \item[\code{S\_compatible}] ! Undefined control sequence. l.8927 ...far as possible compatible with S and \R {} < 2.5.0. ! Undefined control sequence. \code {hexNumeric} l.8931 \item[\code{hexNumeric}] ! Undefined control sequence. l.8932 ...nite complex numbers are output in \samp {"\%a"} format as ! Undefined control sequence. l.8933 ...actions (coded as hexadecimal: see \code {\LinkA{sprintf}{sprintf}}) ! Undefined control sequence. l.8933 ... (coded as hexadecimal: see \code{\LinkA {sprintf}{sprintf}}) ! Undefined control sequence. l.8939 ... on Windows are worked around as from \R {} 3.1.2.) [89] [52 ! Undefined control sequence. \code {digits17} l.8941 \item[\code{digits17}] ! Undefined control sequence. l.8943 \samp {"\%.17g"} which may give more precision than the default ! Undefined control sequence. l.8952 \code {control = NULL}. This displays the object's value, but not its ! Undefined control sequence. l.8953 attributes. The default in \code {\LinkA{deparse}{deparse}} is to dis... ! Undefined control sequence. l.8953 attributes. The default in \code{\LinkA {deparse}{deparse}} is to dis... ! Undefined control sequence. l.8955 the result parseable. (\code {\LinkA{dput}{dput}} and \code{\LinkA{du... ! Undefined control sequence. l.8955 the result parseable. (\code{\LinkA {dput}{dput}} and \code{\LinkA{du... ! Undefined control sequence. l.8955 ...e. (\code{\LinkA{dput}{dput}} and \code {\LinkA{dump}{dump}} do ! Undefined control sequence. l.8955 ...ode{\LinkA{dput}{dput}} and \code{\LinkA {dump}{dump}} do ! Undefined control sequence. l.8957 uses \code {c("keepInteger", "keepNA")}.) ! Undefined control sequence. l.8959 Using \code {control = c("all", "hexNumeric")} comes closest to making ! Undefined control sequence. l.8960 \code {deparse()} an inverse of \code{parse()}. However, not all ! Undefined control sequence. l.8960 \code{deparse()} an inverse of \code {parse()}. However, not all ! Undefined control sequence. l.8966 Only one of \code {"hexNumeric"} and \code{"digits17"} can be specified. ! Undefined control sequence. l.8966 Only one of \code{"hexNumeric"} and \code {"digits17"} can be specified. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8967 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8969 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8971 \end{Value} ! Undefined control sequence. l.8972 \HeaderA {Deprecated}{Marking Objects as Deprecated}{Deprecated} ! Undefined control sequence. l.8973 \aliasA {.Deprecated}{Deprecated}{.Deprecated} ! Undefined control sequence. l.8974 \aliasA {deprecated}{Deprecated}{deprecated} ! Undefined control sequence. l.8975 \keyword {documentation}{Deprecated} ! Undefined control sequence. l.8976 \keyword {utilities}{Deprecated} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8978 \begin{Description} \relax ! Undefined control sequence. l.8979 ...an object is about to be removed from \R {} it is first deprecated and ! Undefined control sequence. l.8980 should include a call to \code {.Deprecated}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or] LaTeX Companion for explanation. Type H for immediate help. ... l.8981 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8983 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8988 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8990 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8991 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8992 \item[\code{new}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8995 \item[\code{package}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8999 \item[\code{msg}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9002 \item[\code{old}] character string specifying the function (default) ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9004 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9005 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9007 \begin{Details} \relax ! Undefined control sequence. l.9008 \code {.Deprecated("")} is called from deprecated ! Undefined control sequence. l.9010 available at \code {help("oldName-deprecated")} (note the quotes). ! Undefined control sequence. l.9011 Functions should be listed in \code {help("pkg-deprecated")} for an ! Undefined control sequence. l.9012 appropriate \code {pkg}, including \code{base}. ! Undefined control sequence. l.9012 appropriate \code{pkg}, including \code {base}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9013 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9015 \begin{SeeAlso} \relax ! Undefined control sequence. l.9016 \code {\LinkA{Defunct}{Defunct}} ! Undefined control sequence. l.9016 \code{\LinkA {Defunct}{Defunct}} ! Undefined control sequence. l.9018 \code {base-deprecated} and so on which list the deprecated functions ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9020 \end{SeeAlso} ! Undefined control sequence. l.9021 \HeaderA {det}{Calculate the Determinant of a Matrix}{det} ! Undefined control sequence. l.9022 \aliasA {determinant}{det}{determinant} ! Undefined control sequence. l.9023 \methaliasA {determinant.matrix}{det}{determinant.matrix} ! Undefined control sequence. l.9024 \keyword {array}{det} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9026 \begin{Description} \relax ! Undefined control sequence. l.9027 \code {det} calculates the determinant of a matrix. \code{determinant} ! Undefined control sequence. l.9027 ...ates the determinant of a matrix. \code {determinant} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9031 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9033 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9038 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9040 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9041 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9042 \item[\code{x}] numeric matrix: logical matrices are coerced to numeric. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9043 \item[\code{logarithm}] logical; if \code{TRUE} (default) return the ! Undefined control sequence. l.9043 \item[\code{logarithm}] logical; if \code {TRUE} (default) return the [90 [53] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9045 \item[\code{...}] Optional arguments. At present none are used. Pre... ! Undefined control sequence. l.9046 versions of \code {det} allowed an optional \code{method} argument. ! Undefined control sequence. l.9046 ... of \code{det} allowed an optional \code {method} argument. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9048 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9049 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9051 \begin{Details} \relax ! Undefined control sequence. l.9052 The \code {determinant} function uses an LU decomposition and the ! Undefined control sequence. l.9053 \code {det} function is simply a wrapper around a call to ! Undefined control sequence. l.9054 \code {determinant}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9058 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9060 \begin{Value} ! Undefined control sequence. l.9061 For \code {det}, the determinant of \code{x}. For \code{determinant}, a ! Undefined control sequence. l.9061 For \code{det}, the determinant of \code {x}. For \code{determinant}, a ! Undefined control sequence. l.9061 ... the determinant of \code{x}. For \code {determinant}, a ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9063 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9064 \item[\code{modulus}] a numeric value. The modulus (absolute value) ... ! Undefined control sequence. l.9065 determinant if \code {logarithm} is \code{FALSE}; otherwise the ! Undefined control sequence. l.9065 determinant if \code{logarithm} is \code {FALSE}; otherwise the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.906]7 \item[\code{sign}] integer; either \eqn{+1}{} or \eqn{-1}{} according... ! Undefined control sequence. l.9067 \item[\code{sign}] integer; either \eqn {+1}{} or \eqn{-1}{} according... ! Undefined control sequence. l.9067 ...ign}] integer; either \eqn{+1}{} or \eqn {-1}{} according to whether ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9069 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9070 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9072 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9073 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9079 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9080 \end{Examples} ! Undefined control sequence. l.9081 \HeaderA {detach}{Detach Objects from the Search Path}{detach} ! Undefined control sequence. l.9082 \keyword {data}{detach} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9084 \begin{Description} \relax ! Undefined control sequence. l.9085 ...database, i.e., remove it from the \code {\LinkA{search}{search}()} ! Undefined control sequence. l.9085 ...e, i.e., remove it from the \code{\LinkA {search}{search}()} ! Undefined control sequence. l.9086 path of available \R {} objects. Usually this is either a ! Undefined control sequence. l.9087 \code {\LinkA{data.frame}{data.frame}} which has been \code{\LinkA{att... ! Undefined control sequence. l.9087 \code{\LinkA {data.frame}{data.frame}} which has been \code{\LinkA{att... ! Undefined control sequence. l.9087 ...frame}{data.frame}} which has been \code {\LinkA{attach}{attach}}ed... ! Undefined control sequence. l.9087 ...data.frame}} which has been \code{\LinkA {attach}{attach}}ed or a ! Undefined control sequence. l.9088 package which was attached by \code {\LinkA{library}{library}}. ! Undefined control sequence. l.9088 package which was attached by \code{\LinkA {library}{library}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9089 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9091 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9096 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9098 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9099 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9100 \item[\code{name}] ! Undefined control sequence. l.9101 The object to detach. Defaults to \code {search()[pos]}. ! Undefined control sequence. l.9103 ...umber is supplied this is taken as \code {pos}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9105 \item[\code{pos}] ! Undefined control sequence. l.9106 Index position in \code {\LinkA{search}{search}()} of the database to ! Undefined control sequence. l.9106 Index position in \code{\LinkA {search}{search}()} of the database to ! Undefined control sequence. l.9107 detach. When \code {name} is a number, \code{pos = name} ! Undefined control sequence. l.9107 ...ch. When \code{name} is a number, \code {pos = name} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9110 \item[\code{unload}] A logical value indicating whether or not to att... ! Undefined control sequence. l.9112 package has a namespace and \code {unload} is \code{TRUE}, then ! Undefined control sequence. l.9112 ...s a namespace and \code{unload} is \code {TRUE}, then ! Undefined control sequence. l.9113 \code {detach} will attempt to unload the namespace \emph{via} ! Undefined control sequence. l.9114 \code {\LinkA{unloadNamespace}{unloadNamespace}}: if the namespace is ... ! Undefined control sequence. l.9114 \code{\LinkA {unloadNamespace}{unloadNamespace}}: if the namespace is ... ! Undefined control sequence. l.9115 another namespace or \code {unload} is \code{FALSE}, no unloading ! Undefined control sequence. l.9115 another namespace or \code{unload} is \code {FALSE}, no unloading ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9118 \item[\code{character.only}] a logical indicating whether \code{name} ! Undefined control sequence. l.9118 ...nly}] a logical indicating whether \code {name} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9120 \item[\code{force}] logical: should a package be detached even though... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9122 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9123 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9125 \begin{Details} \relax ! Undefined control sequence. l.9128 ...an item on the search list such as \code {package:tools}. ! Undefined control sequence. l.9131 the namespace (and may not even with \code {unload = TRUE}), and ! Undefined control sequence. l.9134 not be removed. If you use \code {\LinkA{library}{library}} on a pack... ! Undefined control sequence. l.9134 not be removed. If you use \code{\LinkA {library}{library}} on a pack... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9138 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9140 \begin{Value} ! Undefined control sequence. l.9141 The return value is \LinkA {invisible}{invisible}. It is \code{NULL} ... ! Undefined control sequence. l.9141 ...inkA{invisible}{invisible}. It is \code {NULL} when a ! Undefined control sequence. l.9143 \code {\LinkA{attach}{attach}} when the object was attached (incorpora... ! Undefined control sequence. l.9143 \code{\LinkA {attach}{attach}} when the object was attached (incorpora... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9145 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... > [54 l.9147 \begin{Section} {Good practice} ! Undefined control sequence. l.9148 \code {detach()} without an argument removes the first item on the ! Undefined control sequence. l.9151 changed since an \code {\LinkA{attach}{attach}} call. ! Undefined control sequence. l.9151 changed since an \code{\LinkA {attach}{attach}} call. [91 [37]]] ! Undefined control sequence. l.9153 Use of \code {attach}/\code{detach} is best avoided in functions (see ! Undefined control sequence. l.9153 Use of \code{attach}/\code {detach} is best avoided in functions (see ! Undefined control sequence. l.9154 the help for \code {\LinkA{attach}{attach}}) and in interactive use an... ! Undefined control sequence. l.9154 the help for \code{\LinkA {attach}{attach}}) and in interactive use an... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9156 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9158 \begin{Note} \relax ! Undefined control sequence. l.9159 ... the workspace (position 1) nor the \pkg {base} ! Undefined control sequence. l.9164 e.g.~unloading \pkg {grid} closes all graphics devices, and on some ! Undefined control sequence. l.9165 systems \pkg {tcltk} cannot be reloaded once it has been unloaded and ! Undefined control sequence. l.9166 may crash \R {} if this is attempted. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9167 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9169 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9173 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9175 \begin{SeeAlso} \relax ! Undefined control sequence. l.9176 \code {\LinkA{attach}{attach}}, \code{\LinkA{library}{library}}, \code... ! Undefined control sequence. l.9176 \code{\LinkA {attach}{attach}}, \code{\LinkA{library}{library}}, \code... ! Undefined control sequence. l.9176 \code{\LinkA{attach}{attach}}, \code {\LinkA{library}{library}}, \code... ! Undefined control sequence. l.9176 \code{\LinkA{attach}{attach}}, \code{\LinkA {library}{library}}, \code... ! Undefined control sequence. l.9176 ..., \code{\LinkA{library}{library}}, \code {\LinkA{search}{search}}, ! Undefined control sequence. l.9176 ...{\LinkA{library}{library}}, \code{\LinkA {search}{search}}, ! Undefined control sequence. l.9177 \code {\LinkA{objects}{objects}}, \code{\LinkA{unloadNamespace}{unload... ! Undefined control sequence. l.9177 \code{\LinkA {objects}{objects}}, \code{\LinkA{unloadNamespace}{unload... ! Undefined control sequence. l.9177 \code{\LinkA{objects}{objects}}, \code {\LinkA{unloadNamespac [38]e}{unload... ! Undefined control sequence. l.9177 ...{\LinkA{objects}{objects}}, \code{\LinkA {unloadNamespace}{unloadNa... ! Undefined control sequence. l.9178 \code {\LinkA{library.dynam.unload}{library.dynam.unload}} . ! Undefined control sequence. l.9178 \code{\LinkA {library.dynam.unload}{library.dynam.unload}} . ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9179 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9181 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9182 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.9183 require(splines) # package ! You can't use `macro parameter character #' in horizontal mode. l.9185 # # or also ! You can't use `macro parameter character #' in horizontal mode. l.9185 ## or also ! You can't use `macro parameter character #' in vertical mode. l.9191 # # careful: do not do this unless 'splines' is not already attached. ! You can't use `macro parameter character #' in vertical mode. l.9191 ## careful: do not do this unless 'splines' is not already attached. ! You can't use `macro parameter character #' in horizontal mode. l.9193 detach(2) # 'pos' used for 'name' ! You can't use `macro parameter character #' in vertical mode. l.9195 # # an example of the name argument to attach ! You can't use `macro parameter character #' in vertical mode. l.9195 ## an example of the name argument to attach ! You can't use `macro parameter character #' in horizontal mode. l.9196 # # and of detaching a database named by a character vector ! You can't use `macro parameter character #' in horizontal mode. l.9196 ## and of detaching a database named by a character vector ! Missing $ inserted. $ l.9197 attach_ and_detach <- function(db, pos = 2) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9205 \end{ExampleCode} ! Missing $ inserted. $ l.9205 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9206 \end{Examples} ! Undefined control sequence. l.9207 \HeaderA {diag}{Matrix Diagonals}{diag} ! Undefined control sequence. l.9208 \aliasA {diag<\Rdash{}}{diag}{diag<.Rdash.} ! Undefined control sequence. l.9208 \aliasA{diag<\Rdash {}}{diag}{diag<.Rdash.} ! Undefined control sequence. l.9209 \keyword {array}{diag} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9211 \begin{Description} \relax ! LaTeX Er Chapter 9 [55 [39]ror: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9214 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9216 \begin{Usage} Underfull \hbox (badness 1502) in paragraph at lines 9195--9217 []\OT1/cmr/m/n/10 an ex-am-ple of the name ar-gu-ment to at-tach and of de-tac h-ing a Overfull \hbox (372.15456pt too wide) in paragraph at lines 9195--9217 \OT1/cmr/m/n/10 2)[]\OML/cmm/m/it/10 attach[]nd[]etach\OT1/cmr/m/n/10 (\OML/cmm /m/it/10 women; pos \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9221 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9223 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9224 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9225 \item[\code{x}] a matrix, vector or 1D \code{\LinkA{array}{array}}, o... ! Undefined control sequence. l.9225 ...m[\code{x}] a matrix, vector or 1D \code {\LinkA{array}{array}}, or... ! Undefined control sequence. l.9225 ...{x}] a matrix, vector or 1D \code{\LinkA {array}{array}}, or missing. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9226 \item[\code{nrow, ncol}] optional dimensions for the result when \cod... ! Undefined control sequence. l.9226 ...nal dimensions for the result when \code {x} is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9228 \item[\code{value}] either a single value or a vector of length equal... ! Undefined control sequence. l.9230 to that of \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9231 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9232 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9234 \begin{Details} \relax ! Undefined control sequence. l.9235 \code {diag} has four distinct usages: ! Undefined control sequence. \code l.9238 \item \code {x} is a matrix, when it extracts the diagonal. ! Undefined control sequence. \code l.9239 \item \code {x} is missing and \code{nrow} is specified, it returns ! Undefined control sequence. l.9239 \item \code{x} is missing and \code {nrow} is specified, it returns ! Undefined control sequence. \code l.9241 \item \code {x} is a scalar (length-one vector) and the only ! Undefined control sequence. \code l.9243 \item \code {x} is a `numeric' (\code{\LinkA{complex}{complex}}, ! Undefined control sequence. l.9243 \item \code{x} is a `numeric' (\code {\LinkA{complex}{complex}}, ! Undefined control sequence. l.9243 \item \code{x} is a `numeric' (\code{\LinkA {complex}{complex}}, ! Undefined control sequence. l.9244 \code {numeric}, \code{integer}, \code{\LinkA{logical}{logical}}, or ! Undefined control sequence. l.9244 \code{numeric}, \code {integer}, \code{\LinkA{logical}{logical}}, or ! Undefined control sequence. l.9244 \code{numeric}, \code{integer}, \code {\LinkA{logical}{logical}}, or ! Undefined control sequence. l.9244 ...e{numeric}, \code{integer}, \code{\LinkA {logical}{logical}}, or ! Undefined control sequence. l.9245 \code {\LinkA{raw}{raw}}) vector, either of length at least 2 or there ! Undefined control sequence. l.9245 \code{\LinkA {raw}{raw}}) vector, either of length at least 2 or there ! Undefined control sequence. l.9251 It is an error to specify \code {nrow} or \code{ncol} in the first case. ! Undefined control sequence. l.9251 ...an error to specify \code{nrow} or \code {ncol} in the first case. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9252 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9254 \begin{Value} ! Undefined control sequence. l.9255 If \code {x} is a matrix then \code{diag(x)} returns the diagonal of ! Undefined control sequence. l.9255 If \code{x} is a matrix then \code {diag(x)} returns the diagonal of ! Undefined control sequence. l.9256 \code {x}. The resulting vector will have \code{\LinkA{names}{names}}... ! Undefined control sequence. l.9256 ...}. The resulting vector will have \code {\LinkA{names}{names}} if the ! Undefined control sequence. l.9256 ... resulting vector will have \code{\LinkA {names}{names}} if the ! Undefined control sequence. l.9257 matrix \code {x} has matching column and rownames. ! Undefined control sequence. l.9259 ...rm sets the diagonal of the matrix \code ] {x} to the ! Undefined control sequence. l.9262 ...he value is a diagonal matrix with \code {nrow} ! Undefined control sequence. l.9263 rows and \code {ncol} columns (if \code{ncol} is not given the matrix ! Undefined control sequence. l.9263 rows and \code{ncol} columns (if \code {ncol} is not given the matrix ! Undefined control sequence. l.9264 is square). Here \code {nrow} is taken from the argument if specified, ! Undefined control sequence. l.9265 otherwise inferred from \code {x}: if that is a vector (or 1D array) of ! Undefined control sequence. l.9267 is of length one and neither \code {nrow} nor \code{ncol} is specified, ! Undefined control sequence. l.9267 ...th one and neither \code{nrow} nor \code {ncol} is specified, ! Undefined control sequence. l.9268 \code {nrow = as.integer(x)}. ! Undefined control sequence. l.9271 except in the fourth case, when \code {x} gives the diagonal elements: ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9274 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9276 \begin{Note} \relax ! Undefined control sequence. l.9277 Using \code {diag(x)} can have unexpected effects if \code{x} is a ! Undefined control sequence. l.9277 ...x)} can have unexpected effects if \code {x} is a ! Undefined control sequence. l.9278 ... that could be of length one. Use \code {diag(x, nrow = ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9280 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9282 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9286 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9288 \begin{SeeAlso} \relax ! Undefined control sequence. l.9289 \code {\LinkA{upper.tri}{upper.tri}}, \code{\LinkA{lower.tri}{lower.tr... ! Undefined control sequence. l.9289 \code{\LinkA {upper.tri}{upper.tri}}, \code{\LinkA{lower.tri}{lower.tr... ! Undefined control sequence. l.9289 \code{\LinkA{upper.tri}{upper.tri}}, \code {\LinkA{lower.tri}{lower.tr... ! Undefined control sequence. l.9289 ...nkA{upper.tri}{upper.tri}}, \code{\LinkA {lower.tri}{lower.tri}}, \... ! Undefined control sequence. l.9289 ...ode{\LinkA{lower.tri}{lower.tri}}, \code {\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.9289 ...nkA{lower.tri}{lower.tri}}, \code{\LinkA {matrix}{matrix}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9290 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9292 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9293 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.9295 diag(10, 3, 4) # guess what? [92 Underfull \hbox (badness 3826) in paragraph at lines 4914--4917 []@textrm Some (but not all) ex-ten-sions are listed at [][]@texttt https://gc c.gnu.org/onlinedocs/ Underfull \hbox (badness 10000) in paragraph at lines 4914--4917 @texttt gcc/C-Extensions.html[][][] @textrm and [][]@texttt https://gcc.gnu.or g/onlinedocs/gcc/C_002b_ [56] [40 ! You can't use `macro parameter character #' in vertical mode. l.9298 # # other "numeric"-like diagonal matrices : ! You can't use `macro parameter character #' in vertical mode. l.9298 ## other "numeric"-like diagonal matrices : ! You can't use `macro parameter character #' in horizontal mode. l.9299 diag(c(1i,2i)) # complex ! You can't use `macro parameter character #' in horizontal mode. l.9300 diag(TRUE, 3) # logical ! You can't use `macro parameter character #' in horizontal mode. l.9301 diag(as.raw(1:3)) # raw ! You can't use `macro parameter character #' in horizontal mode. l.9302 (D2 <- diag(2:1, 4)); typeof(D2) # "integer" ! You can't use `macro parameter character #' in horizontal mode. l.9305 # # diag() = variances ! You can't use `macro parameter character #' in horizontal mode. l.9305 ## diag() = variances ! You can't use `macro parameter character #' in horizontal mode. l.9307 # -> vector with names "X" and "Y" ! You can't use `macro parameter character #' in horizontal mode. l.9309 M; diag(M) # named as well ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9310 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9311 \end{Examples} ! Undefined control sequence. l.9312 \HeaderA {diff}{Lagged Differences}{diff} ! Undefined control sequence. l.9313 \methaliasA {diff.Date}{diff}{diff.Date} ! Undefined control sequence. l.9314 \methaliasA {diff.default}{diff}{diff.default} ! Undefined control sequence. l.9315 \methaliasA {diff.POSIXt}{diff}{diff.POSIXt} ! Undefined control sequence. l.9316 \keyword {arith}{diff} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9318 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9320 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9322 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9335 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9337 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9338 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9339 \item[\code{x}] a numeric vector or matrix containing the values to be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9341 \item[\code{lag}] an integer indicating which lag to use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9342 \item[\code{differences}] an integer indicating the order of the diff... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9343 \item[\code{...}] further arguments to be passed to or from methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9344 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9345 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9347 \begin{Details} \relax ! Undefined control sequence. l.9348 \code {diff} is a generic function with a default method and ones for ! Undefined control sequence. l.9349 classes \code {"\LinkA{ts}{ts}"}, \code{"\LinkA{POSIXt}{POSIXt}"} and ! Undefined control sequence. l.9349 classes \code{"\LinkA {ts}{ts}"}, \code{"\LinkA{POSIXt}{POSIXt}"} and ! Undefined control sequence. l.9349 classes \code{"\LinkA{ts}{ts}"}, \code {"\LinkA{POSIXt}{POSIXt}"} and ! Undefined control sequence. l.9349 ...s \code{"\LinkA{ts}{ts}"}, \code{"\LinkA {POSIXt}{POSIXt}"} and ! Undefined control sequence. l.9350 \code {"\LinkA{Date}{Date}"}. ! Undefined control sequence. l.9350 \code{"\LinkA {Date}{Date}"}. ! Undefined control sequence. l.9352 \code {\LinkA{NA}{NA}}'s propagate. ! Undefined control sequence. l.9352 \code{\LinkA {NA}{NA}}'s propagate. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9353 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9355 \begin{Value} ! Undefined control sequence. l.9356 If \code {x} ]]is a vector of length \code{n} and \code{differences = 1}, ! Undefined control sequence. l.9356 If \code{x} is a vector of length \code {n} and \code{differences = 1}, ! Undefined control sequence. l.9356 ...is a vector of length \code{n} and \code {differences = 1}, ! Undefined control sequence. l.9358 \code {x[(1+lag):n] - x[1:(n-lag)]}. ! Undefined control sequence. l.9360 If \code {difference} is larger than one this algorithm is applied ! Undefined control sequence. l.9361 recursively to \code {x}. ! Undefined control sequence. l.9363 \code {x}. ! Undefined control sequence. l.9365 If \code {x} is a matrix then the difference operations are carried out ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9367 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9369 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9373 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9375 \begin{SeeAlso} \relax ! Undefined control sequence. l.9376 \code {\LinkA{diff.ts}{diff.ts}}, \code{\LinkA{diffinv}{diffinv}}. ! Undefined control sequence. l.9376 \code{\LinkA {diff.ts}{diff.ts}}, \code{\LinkA{diffinv}{diffinv}}. ! Undefined control sequence. l.9376 \code{\LinkA{diff.ts}{diff.ts}}, \code {\LinkA{diffinv}{diffinv}}. ! Undefined control sequence. l.9376 ...{\LinkA{diff.ts}{diff.ts}}, \code{\LinkA {diffinv}{diffinv}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9377 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9379 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9380 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9388 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9389 \end{Examples} ! Undefined control sequence. l.9390 \HeaderA {difftime}{Time Intervals / Differences}{difftime} ! Undefined control sequence. l.9391 \aliasA {*.difftime}{difftime}{*.difftime} ! Undefined control sequence. l.9392 \aliasA {/.difftime}{difftime}{/.difftime} ! Undefined control sequence. l.9393 \aliasA {as.difftime}{difftime}{as.difftime} ! Undefined control sequence. l.9394 \aliasA {as.double.difftime}{difftime}{as.double.difftime} ! Undefined control sequence. l.9395 \aliasA {c.difftime}{difftime}{c.difftime} ! Undefined control sequence. l.9396 \aliasA {diff.difftime}{difftime}{diff.difftime} ! Undefined control sequence. l.9397 \aliasA {format.difftime}{difftime}{format.difftime} ! Undefined control sequence. l.9398 \aliasA {is.numeric.difftime}{difftime}{is.numeric.difftime} ! Undefined control sequence. l.9399 \aliasA {Math.difftime}{difftime}{Math.difftime} ! Undefined control sequence. l.9400 \aliasA {mean.difftime}{difftime}{mean.difftime} ! Undefined control sequence. l.9401 \aliasA {Ops.difftime}{difftime}{Ops.difftime} ! Undefined control sequence. l.9402 \aliasA {print.difftime}{difftime}{print.difftime} ! Undefined control sequence. l.9403 \aliasA {Summary.difftime}{difftime}{Summary.difftime} ! Undefined control sequence. l.9404 \aliasA {time interval}{difftime}{time interval} ! Undefined control sequence. l.9405 \aliasA {units}{difftime}{units} ! Undefined control sequence. l.9406 \methaliasA {units.difftime}{difftime}{units.difftime} ! Undefined control sequence. l.9407 \aliasA {units<\Rdash{}}{difftime}{units<.Rdash.} ! Undefined control sequence. l.9407 \aliasA{units<\Rdash {}}{difftime}{units<.Rdash.} ! Undefined control sequence. l.9408 \methaliasA {units<\Rdash{}.difftime}{difftime}{units<.Rdash..difftime} ! Undefined control sequence. l.9408 \methaliasA{units<\Rdash {}.difftime}{difftime}{units<.Rdash..difftime} ! Undefined control sequence. l.9409 \aliasA {[.difftime}{difftime}{[.difftime} ! Undefined control sequence. l.9410 \keyword {utilities}{difftime} ! Undefined control sequence. l.9411 \keyword {chron}{difftime} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9413 \begin{Description} \relax ! Undefined control sequence. l.9415 \code {\LinkA{print}{print}()} method calls these ``time differences''. ! Undefined control sequence. l.9415 \code{\LinkA {print}{print}()} method calls these ``time differences''. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9416 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9418 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 iff-time*.difftime /.diff-timed-iff-time/.difftime as.difftimed ifftimeas.difftime Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 as.double.difftimedifftimeas.double.difftime c.difftimedifftime c.difftime Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 diff.difftimedifftimediff.difftime for-mat.difftimedifftimeform at.difftime Overfull \hbox (5.7 Chapter 10231pt too wide) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 is.numeric.difftimedifftimeis.numeric.difftime Math.difftimedif ftimeMath.difftime Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 mean.difftimedifftimemean.difftime Ops.difftimedifftimeOps.diff time Underfull \hbox (badness 1163) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 print.difftimedifftimeprint.difftime Sum-mary.difftimedifftimeS ummary.difftime Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 time in-ter-vald-iff-time-time in-ter-val units-d-iff-time-u-ni ts Underfull \hbox (badness 10000) in paragraph at lines 9387--9419 \OT1/cmr/m/n/10 units.difftimedifftimeunits.difftime units for immediate help. ... l.9442 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9444 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9445 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9446 \item[\code{time1, time2}] \LinkA{date-time}{date.Rdash.time} or \Lin... ! Undefined control sequence. l.9446 \item[\code{time1, time2}] \LinkA {date-time}{date.Rdash.time} or \Lin... ! Undefined control sequence. l.9446 ...kA{date-time}{date.Rdash.time} or \LinkA {date}{Dates} objects. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9447 \item[\code{tz}] an optional \LinkA{time zone}{time zone} specificati... ! Undefined control sequence. l.9447 \item[\code{tz}] an optional \LinkA {time zone}{time zone} specificati... ! Undefined control sequence. l.9448 conversion, mainly for \code {"POSIXlt"} objects. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9449 \item[\code{units}] character string. Units in which the results are ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9451 \item[\code{value}] character string. Like \code{units}, except that ! Undefined control sequence. l.9451 ...de{value}] character string. Like \code {units}, except that ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9453 \item[\code{tim}] character string or numeric value specifying a time... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9454 \item[\code{format}] character specifying the format of \code{tim}: see ! Undefined control sequence. l.9454 ...character specifying the format of \code {tim}: see ! Undefined control sequence. l.9455 \code {\LinkA{strptime}{strptime}}. The default is a locale-specific ... ! Undefined control sequence. l.9455 \code{\LinkA {strptime}{strptime}}. The default is a locale-specific ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9456 \item[\code{x}] an object inheriting from class \code{"difftime"}. ! Undefined control sequence. l.9456 ...}] an object inheriting from class \code {"difftime"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9457 \item[\code{...}] arguments to be passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9458 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9459 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9461 \begin{Details} \relax ! Undefined control sequence. l.9462 Function \code {difftime} calculates a difference of two date/time ! Undefined control sequence. l.9463 ...cts and returns an object of class \code {"difftime"} with an ! Undefined control sequence. l.9465 \code {\LinkA{Math}{S3groupGeneric}} group method provides ! Undefined control sequence. l.9465 \code{\LinkA {Math}{S3groupGeneric}} group method provides ! Undefined control sequence. l.9466 \code {\LinkA{round}{round}}, \code{\LinkA{signif}{signif}}, \code{\Li... ! Undefined control sequence. l.9466 \code{\LinkA {round}{round}}, \code{\LinkA{signif}{signif}}, \code{\Li... ! Undefined control sequence. l.9466 \code{\LinkA{round}{round}}, \code {\LinkA{signif}{signif}}, \code{\Li... ! Undefined control sequence. l.9466 \code{\LinkA{round}{round}}, \code{\LinkA {signif}{signif}}, \code{\Li... ! Undefined control sequence. l.9466 ...}}, \code{\LinkA{signif}{signif}}, \code {\LinkA{floor}{floor}}, ! Undefined control sequence. l.9466 ...de{\LinkA{signif}{signif}}, \code{\LinkA {floor}{floor}}, ! Undefined control sequence. l.9467 \code {\LinkA{ceiling}{ceiling}}, \code{\LinkA{trunc}{trunc}}, \code{\... ! Undefined control sequence. l.9467 \code{\LinkA {ceiling}{ceiling}}, \code{\LinkA{trunc}{trunc}}, \code{\... ! Undefined control sequence. l.9467 \code{\LinkA{ceiling}{ceiling}}, \code {\LinkA{trunc}{trunc}}, \code{\... ! Undefined control sequence. l.9467 ...{\LinkA{ceiling}{ceiling}}, \code{\LinkA {trunc}{trunc}}, \code{\Li... ! Undefined control sequence. l.9467 ...ng}}, \code{\LinkA{trunc}{trunc}}, \code {\LinkA{abs}{abs}}, and ! Undefined control sequence. l.9467 ...code{\LinkA{trunc}{trunc}}, \code{\LinkA {abs}{abs}}, and ! Undefined control sequence. l.9468 \code {\LinkA{sign}{sign}} methods for objects of this class, and ther... ! Undefined control sequence. l.9468 \code{\LinkA {sign}{sign}} methods for objects of this class, and ther... ! Undefined control sequence. l.9470 \code {\LinkA{Ops}{S3groupGeneric}}) logical and arithmetic ! Undefined control sequence. l.9470 \code{\LinkA {Ops}{S3groupGeneric}}) logical and arithmetic ! Undefined control sequence. l.9473 If \code {units = "auto"}, a suitable set of units is chosen, the largest ! Undefined control sequence. l.9474 possible (excluding \code {"weeks"}) in which all the absolute ! Undefined control sequence. l.9478 by calling \code {difftime} with \code{units = "auto"}. Alternatively, ! Undefined control sequence. l.9478 by calling \code{difftime} with \code {units = "auto"}. Alternatively, ! Undefined control sequence. l.9479 \code {as.difftime()} works on character-coded or numeric time ! Undefined control sequence. l.9481 \code {format} has no effect. [94 [42]] [58 ! Undefined control sequence. l.9483 Limited arithmetic is available on \code {"difftime"} objects: they can ! Undefined control sequence. l.9486 \code {"difftime"} object implicitly converts the numeric vector to a ! Undefined control sequence. l.9487 \code {"difftime"} object with the same units as the \code{"difftime"} ! Undefined control sequence. l.9487 ... object with the same units as the \code {"difftime"} ! Undefined control sequence. l.9488 object. There are methods for \code {\LinkA{mean}{mean}} and ! Undefined control sequence. l.9488 object. There are methods for \code{\LinkA {mean}{mean}} and ! Undefined control sequence. l.9489 \code {\LinkA{sum}{sum}} (via the \code{\LinkA{Summary}{S3groupGeneric}} ! Undefined control sequence. l.9489 \code{\LinkA {sum}{sum}} (via the \code{\LinkA{Summary}{S3groupGeneric}} ! Undefined control sequence. l.9489 \code{\LinkA{sum}{sum}} (via the \code {\LinkA{Summary}{S3groupGeneric}} ! Undefined control sequence. l.9489 ...{\LinkA{sum}{sum}} (via the \code{\LinkA {Summary}{S3groupGeneric}} ! Undefined control sequence. l.9490 group generic), and \code {\LinkA{diff}{diff}} via \code{\LinkA{diff.d... ! Undefined control sequence. l.9490 group generic), and \code{\LinkA {diff}{diff}} via \code{\LinkA{diff.d... ! Undefined control sequence. l.9490 ... and \code{\LinkA{diff}{diff}} via \code {\LinkA{diff.default}{diff... ! Undefined control sequence. l.9490 ...ode{\LinkA{diff}{diff}} via \code{\LinkA {diff.default}{diff.default}} ! Undefined control sequence. l.9491 building on the \code {"difftime"} method for arithmetic, notably ! Undefined control sequence. l.9492 \code {-}. ! Undefined control sequence. l.9494 The units of a \code {"difftime"} object can be extracted by the ! Undefined control sequence. l.9495 \code {units} function, which also has a replacement form. If the ! Undefined control sequence. l.9499 Note that \code {units = "days"} means a period of 24 hours, hence ! Undefined control sequence. l.9501 of class \code {"\LinkA{Date}{Date}"} are computed as if in the UTC ti... ! Undefined control sequence. l.9501 of class \code{"\LinkA {Date}{Date}"} are computed as if in the UTC ti... ! Undefined control sequence. l.9503 The \code {as.double} method returns the numeric value expressed in ! Undefined control sequence. l.9504 the specified units. Using \code {units = "auto"} means the units of... ! Undefined control sequence. l.9507 The \code {format} method simply formats the numeric value and appends ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9509 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9511 \begin{Note} \relax ! Undefined control sequence. l.9512 Units such as \code {"months"} are not possible as they are not of ! Undefined control sequence. l.9514 use \code {\LinkA{seq.Date}{seq.Date}} or \code{\LinkA{seq.POSIXt}{seq... ! Undefined control sequence. l.9514 use \code{\LinkA {seq.Date}{seq.Date}} or \code{\LinkA{seq.POSIXt}{seq... ! Undefined control sequence. l.9514 ...ode{\LinkA{seq.Date}{seq.Date}} or \code {\LinkA{seq.POSIXt}{seq.PO... ! Undefined control sequence. l.9514 ...nkA{seq.Date}{seq.Date}} or \code{\LinkA {seq.POSIXt}{seq.POSIXt}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9515 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9517 \begin{SeeAlso} \relax ! Undefined control sequence. l.9518 \code {\LinkA{DateTimeClasses}{DateTimeClasses}}. ! Undefined control sequence. l.9518 \code{\LinkA {DateTimeClasses}{DateTimeClasses}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9519 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9521 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9522 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.9525 Sys.time() - z # just over 3600 seconds. ! You can't use `macro parameter character #' in vertical mode. l.9527 # # time interval between release days of R 1.2.2 and 1.2.3. ! You can't use `macro parameter character #' in vertical mode. l.9527 ## time interval between release days of R 1.2.2 and 1.2.3. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9536 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9537 \end{Examples} ! Undefined control sequence. l.9538 \HeaderA {dim}{Dimensions of an Object}{dim} ! Undefined control sequence. l.9539 \methaliasA {dim.data.frame}{dim}{dim.data.frame} ! Undefined control sequence. l.9540 \aliasA {dim<\Rdash{}}{dim}{dim<.Rdash.} ! Undefined control sequence. l.9540 \aliasA{dim<\Rdash {}}{dim}{dim<.Rdash.} ! Undefined control sequence. l.9541 \keyword {array}{dim} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9543 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type ] H for immediate help. ... l.9545 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9547 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9552 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9554 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9555 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9556 \item[\code{x}] an \R{} object, for example a matrix, array or data f... ! Undefined control sequence. l.9556 \item[\code{x}] an \R {} object, for example a matrix, array or data f... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9557 \item[\code{value}] For the default method, either \code{NULL} or ! Undefined control sequence. l.9557 ...e}] For the default method, either \code {NULL} or ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9559 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9560 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9562 \begin{Details} \relax ! Undefined control sequence. l.9563 The functions \code {dim} and \code{dim<-} are \LinkA{internal generic... ! Undefined control sequence. l.9563 The functions \code{dim} and \code {dim<-} are \LinkA{internal generic... ! Undefined control sequence. l.9563 ...s \code{dim} and \code{dim<-} are \LinkA {internal generic}{interna... ! Undefined control sequence. l.9564 \LinkA {primitive}{primitive} functions. ! Undefined control sequence. l.9566 \code {dim} has a method for \code{\LinkA{data.frame}{data.frame}}s, w... ! Undefined control sequence. l.9566 \code{dim} has a method for \code {\LinkA{data.frame}{data.frame}}s, w... ! Undefined control sequence. l.9566 \code{dim} has a method for \code{\LinkA {data.frame}{data.frame}}s, w... ! Undefined control sequence. l.9567 the lengths of the \code {row.names} attribute of \code{x} and ! Undefined control sequence. l.9567 ... the \code{row.names} attribute of \code {x} and ! Undefined control sequence. l.9568 of \code {x} (as the numbers of rows and columns respectively). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9569 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9571 \begin{Value} ! Undefined control sequence. l.9572 ...hence in particular, for a matrix) \code {dim} retrieves ! Undefined control sequence. l.9573 the \code {dim} attribute of the object. It is \code{NULL} or a vector ! Undefined control sequence. l.9573 ...m} attribute of the object. It is \code {NULL} or a vector ! Undefined control sequence. l.9574 of mode \code {\LinkA{integer}{integer}}. ! Undefined control sequence. l.9574 of mode \code{\LinkA {integer}{integer}}. ! Undefined control sequence. l.9576 The replacement method changes the \code {"dim"} attribute (provided the ! Undefined control sequence. l.9577 ...lue is compatible) and removes any \code {"dimnames"} \emph{and} ! Undefined control sequence. l.9578 \code {"names"} attributes. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9579 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9581 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9585 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9587 \begin{SeeAlso} \relax ! Undefined control sequence. l.9588 \code {\LinkA{ncol}{ncol}}, \code{\LinkA{nrow}{nrow}} and \code{\LinkA... ! Undefined control sequence. l.9588 \code{\LinkA {ncol}{ncol}}, \code{\LinkA{nrow}{nrow}} and \code{\LinkA... ! Undefined control sequence. l.9588 \code{\LinkA{ncol}{ncol}}, \code {\LinkA{nrow}{nrow}} and \code{\LinkA... ! Undefined control sequence. l.9588 \code{\LinkA{ncol}{ncol}}, \code{\LinkA {nrow}{nrow}} and \code{\LinkA... ! Undefined control sequence. l.9588 ...l}}, \code{\LinkA{nrow}{nrow}} and \code {\LinkA{dimnames}{dimnames}}. ! Undefined co [43 [59ntrol sequence. l.9588 ...ode{\LinkA{nrow}{nrow}} and \code{\LinkA {dimnames}{dimnames}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9589 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9591 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9592 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.9596 # simple versions of nrow and ncol could be defined as follows ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9599 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9600 \end{Examples} ! Undefined control sequence. l.9601 \HeaderA {dimnames}{Dimnames of an Object}{dimnames} ! Undefined control sequence. l.9602 \methaliasA {dimnames.data.frame}{dimnames}{dimnames.data.frame} ! Undefined control sequence. l.9603 \aliasA {dimnames<\Rdash{}}{dimnames}{dimnames<.Rdash.} ! Undefined control sequence. l.9603 \aliasA{dimnames<\Rdash {}}{dimnames}{dimnames<.Rdash.} ! Undefined control sequence. l.9604 \methaliasA {dimnames<\Rdash{}.data.frame}{dimnames}{dimnames<.Rdash..... ! Undefined control sequence. l.9604 \methaliasA{dimnames<\Rdash {}.data.frame}{dimnames}{dimnames<.Rdash..... ! Undefined control sequence. l.9605 \aliasA {provideDimnames}{dimnames}{provideDimnames} ! Undefined control sequence. l.9606 \keyword {array}{dimnames} ! Undefined control sequence. l.9607 \keyword {manip}{dimnames} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9609 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9611 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9613 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 9596--9614 \OT1/cmr/m/n/10 an Ob-ject-dim-names dim-names.data.framedimnamesdimnames.data. frame Underfull \hbox (badness 10000) in paragraph at lines 9596--9614 \OT1/cmr/m/n/10 dim-names for immediate help. ... l.9620 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9622 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9623 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9624 \item[\code{x}] an \R{} object, for example a matrix, array or data f... ! Undefined control sequence. l.9624 \item[\code{x}] an \R {} object, for example a matrix, array or data f... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9625 \item[\code{value}] a possible value for \code{dimnames(x)}: see the ! Undefined control sequence. l.9625 ...\code{value}] a possible value for \code {dimnames(x)}: see the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9627 \item[\code{sep}] a character string, used to separate \code{base} ! Undefined control sequence. l.9627 ...character string, used to separate \code {base} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9629 \item[\code{base}] a non-empty \code{\LinkA{list}{list}} of character... ! Undefined control sequence. l.9629 \item[\code{base}] a non-empty \code {\LinkA{list}{list}} of character... ! Undefined control sequence. l.9629 \item[\code{base}] a non-empty \code{\LinkA {list}{list}} of character... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9633 \item[\code{unique}] logical indicating that the dimnames constructed... ! Undefined control sequence. l.9634 ...hin each dimension in the sense of \code {\LinkA{make.unique}{make.... ! Undefined control sequence. l.9634 ...h dimension in the sense of \code{\LinkA {make.unique}{make.unique}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9635 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9636 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9638 \begin{Details} \relax ! Undefined control sequence. l.9639 The functions \code {dimnames} and \code{dimnames<-} are generic. ! Undefined control sequence. l.9639 The functions \code{dimnames} and \code {dimnames<-} are generic. ! Undefined control sequence. l.9641 For an \code {\LinkA{array}{array}} (and hence in particular, for a ! Undefined control sequence. l.9641 For an \code{\LinkA {array}{array}} (and hence in particular, for a ! Undefined control sequence. l.9642 \code {\LinkA{matrix}{matrix}}), they retrieve or set the \code{dimnames} ! Undefined control sequence. l.9642 \code{\LinkA {matrix}{matrix}}), they retrieve or set the \code{dimnames} ! Undefined control sequence. l.9642 ...atrix}}), they retrieve or set the \code {dimnames} ! Undefined control sequence. l.9643 attribute (see \LinkA {attributes}{attributes}) of the object. A list ! Undefined control sequence. l.9644 \code {value} can have names, and these will be used to label the ! Undefined control sequence. l.9648 elements of \code {value} to character, but does not dispatch methods ! Undefined control sequence. l.9649 for \code {as.character}. It coerces zero-length elements to ! Undefined control sequence. l.9650 \code {NULL}, and a zero-length list to \code{NULL}. If \code{value} ! Undefined control sequence. l.9650 ...e{NULL}, and a zero-length list to \code {NULL}. If \code{value} ! Undefined control sequence. l.9650 ...ro-length list to \code{NULL}. If \code {value} ! Undefined control sequence. l.9652 \code {NULL}s to the needed length. ! Undefined control sequence. l.9655 its \code {\LinkA{row.names}{row.names}} and its \code{\LinkA{names}{n... ! Undefined control sequence. l.9655 its \code{\LinkA {row.names}{row.names}} and its \code{\LinkA{names}{n... ! Undefined control sequence. l.9655 ...nkA{row.names}{row.names}} and its \code {\LinkA{names}{names}}. F... ! Undefined control sequence. l.9655 ....names}{row.names}} and its \code{\LinkA {names}{names}}. For the ! Undefined control sequence. l.9656 replacement method each component of \code {value} will be coerced by ! Undefined control sequence. l.9657 \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.9657 \code{\LinkA {as.character}{as.character}}. ! Undefined control sequence. l.9659 For a 1D matrix the \code {\LinkA{names}{names}} are the same thing as... ! Undefined control sequence. l.9659 For a 1D matrix the \code{\LinkA {names}{names}} are the same thing as... ! Undefined control sequence. l.9660 (only) component of the \code {dimnames}. ! Undefined control sequence. l.9662 Both are \LinkA {primitive}{primitive} functions. ! Undefined control sequence. l.9664 \code {provideDimnames(x)} provides \code{dimna [60 [44mes} where ! Undefined control sequence. l.9664 \code{provideDimnames(x)} provides \code {dimnames} where ! Undefined control sequence. l.9665 ``missing'', such that its result has \code {\LinkA{character}{charact... ! Undefined control sequence. l.9665 ...', such that its result has \code{\LinkA {character}{character}} ! Undefined control sequence. l.9666 dimnames for each component. If \code {unique} is true as by default, ! Undefined control sequence. l.9667 ...e unique within each component via \code {\LinkA{make.unique}{make.... ! Undefined control sequence. l.9667 ...e within each component via \code{\LinkA {make.unique}{make.unique}(*, ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9669 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9671 \begin{Value} ! Undefined control sequence. l.9672 ...mnames of a matrix or array can be \code {NULL} (which is not ! Undefined control sequence. l.9673 ...d) or a list of the same length as \code {dim(x)}. If a list, its ! Undefined control sequence. l.9674 components are either \code {NULL} or a character vector with positive ! Undefined control sequence. l.9675 ...th of the appropriate dimension of \code {x}. The list can have ! Undefined control sequence. l.9676 ...s possible that all components are \code {NULL}: such ! Undefined control sequence. l.9677 dimnames may get converted to \code {NULL}. Underfull \hbox (badness 1009) in paragraph at lines 9664--9678 \OT1/cmr/m/n/10 re-sult has char-ac-ter-char-ac-ter dim-names for each com-po-n ent. If unique Underfull \hbox (badness 3568) in paragraph at lines 9664--9678 \OT1/cmr/m/n/10 is true as by de-fault, they are unique within each com-po-nent via ! Undefined control sequence. l.9679 For the \code {"data.frame"} method both dimnames are character ! Undefined control sequence. l.9683 \code {provideDimnames(x)} returns \code{x}, with ``\code{NULL} - ! Undefined control sequence. l.9683 \code{provideDimnames(x)} returns \code {x}, with ``\code{NULL} - ! Undefined control sequence. l.9683 ...names(x)} returns \code{x}, with ``\code {NULL} - ! Undefined control sequence. l.9684 free'' \code {dimnames}, i.e.~each component a character vector of ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9686 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9688 \begin{Note} \relax ! Undefined control sequence. l.9690 \code {dimnames(A)[[1]] <- value} is a common paradigm, but note that ! Undefined control sequence. l.9691 .].. not work if the value assigned is \code {NULL}. Use ! Undefined control sequence. l.9692 \code {\LinkA{rownames}{rownames}} instead, or (as it does) manipulate... ! Undefined control sequence. l.9692 \code{\LinkA {rownames}{rownames}} instead, or (as it does) manipulate... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9694 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9696 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9700 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9702 \begin{SeeAlso} \relax ! Undefined control sequence. l.9703 \code {\LinkA{rownames}{rownames}}, \code{\LinkA{colnames}{colnames}}; ! Undefined control sequence. l.9703 \code{\LinkA {rownames}{rownames}}, \code{\LinkA{colnames}{colnames}}; ! Undefined control sequence. l.9703 \code{\LinkA{rownames}{rownames}}, \code {\LinkA{colnames}{colnames}}; ! Undefined control sequence. l.9703 ...LinkA{rownames}{rownames}}, \code{\LinkA {colnames}{colnames}}; ! Undefined control sequence. l.9704 \code {\LinkA{array}{array}}, \code{\LinkA{matrix}{matrix}}, \code{\Li... ! Undefined control sequence. l.9704 \code{\LinkA {array}{array}}, \code{\LinkA{matrix}{matrix}}, \code{\Li... ! Undefined control sequence. l.9704 \code{\LinkA{array}{array}}, \code {\LinkA{matrix}{matrix}}, \code{\Li... ! Undefined control sequence. l.9704 \code{\LinkA{array}{array}}, \code{\LinkA {matrix}{matrix}}, \code{\Li... ! Undefined control sequence. l.9704 ...}}, \code{\LinkA{matrix}{matrix}}, \code {\LinkA{data.frame}{data.f... ! Undefined control sequence. l.9704 ...de{\LinkA{matrix}{matrix}}, \code{\LinkA {data.frame}{data.frame}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9705 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9707 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9708 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.9709 # # simple versions of rownames and colnames ! You can't use `macro parameter character #' in horizontal mode. l.9709 ## simple versions of rownames and colnames ! You can't use `macro parameter character #' in horizontal mode. l.9710 # # could be defined as follows ! You can't use `macro parameter character #' in horizontal mode. l.9710 ## could be defined as follows [96]] ! You can't use `macro parameter character #' in horizontal mode. l.9719 ...list(letters[-(1:9)], tail(LETTERS)))) # recycling ! You can't use `macro parameter character #' in horizontal mode. l.9720 ...Dimnames(A, base= list(c("AA","BB")))) # recycling on both levels ! You can't use `macro parameter character #' in horizontal mode. l.9721 # # set "empty dimnames": ! You can't use `macro parameter character #' in horizontal mode. l.9721 ## set "empty dimnames": ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9723 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9724 \end{Examples} ! Undefined control sequence. l.9725 \HeaderA {do.call}{Execute a Function Call}{do.call} ! Undefined control sequence. l.9726 \keyword {programming}{do.call} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9728 \begin{Description} \relax ! Undefined control sequence. l.9729 \code {do.call} constructs and executes a function call from a name or ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9731 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9733 \begin{Usage} Underfull \hbox (badness 5817) in paragraph at lines 9714--9734 []\OT1/cmr/m/n/10 (dn <- dim-names(A <- pro-videD-im-names(N <- ar-ray(1:24, di m = Underfull \hbox (badness 2351) in paragraph at lines 9714--9734 \OT1/cmr/m/n/10 2:4)))) A0 <- A; dim-names(A)[2:3] <- list(NULL) stopifnot(iden tical(A0, Underfull \hbox (badness 10000) in paragraph at lines 9714--9734 \OT1/cmr/m/n/10 pro-videD-im-names(A))) strd <- func-tion(x) utils::str(dimname s(x)) Underfull \hbox (badness 10000) in paragraph at lines 9714--9734 \OT1/cmr/m/n/10 strd(provideDimnames(A, base= list(letters[-(1:9)], tail(LETTER S)))) ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9737 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9739 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9740 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [45 l.9741 \item[\code{what}] either a function or a non-empty character string ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9743 \item[\code{args}] a \emph{list} of arguments to the function call. The ! Undefined control sequence. l.9744 \code {names} attribute of \code{args} gives the argument names. ! Undefined control sequence. l.9744 \code{names} attribute of \code {args} gives the argument names. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9745 \item[\code{quote}] a logical value indicating whether to quote the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9747 \item[\code{envir}] an environment within which to evaluate the call.... ! Undefined control sequence. l.9748 will be most useful if \code {what} is a character string and ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9750 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9751 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9753 \begin{Details} \relax ! Undefined control sequence. l.9754 If \code {quote} is \code{FALSE}, the default, then the arguments are ! Undefined control sequence. l.9754 If \code{quote} is \code {FALSE}, the default, then the arguments are ! Undefined control sequence. l.9755 ...in the calling environment, not in \code {envir}). If ! Undefined control sequence. l.9756 \code {quote} is \code{TRUE} then each argument is quoted (see ! Undefined control sequence. l.9756 \code{quote} is \code {TRUE} then each argument is quoted (see ! Undefined control sequence. l.9757 \code {\LinkA{quote}{quote}}) so that the effect of argument evaluatio... ! Undefined control sequence. l.9757 \code{\LinkA {quote}{quote}}) so that the effect of argument evaluatio... ! Undefined control sequence. l.9761 ...ehavior of some functions, such as \code {\LinkA{substitute}{substi... ! Undefined control sequence. l.9761 ... of some functions, such as \code{\LinkA {substitute}{substitute}}, ! Undefined control sequence. l.9762 ...same for functions evaluated using \code {do.call} as ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for i] [61mmediate help. ... l.9765 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9767 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9769 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9771 \begin{Section} {Warning} ! Undefined control sequence. l.9773 \code {.Internal} and other non-API calls. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9774 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9776 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9780 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9782 \begin{SeeAlso} \relax ! Undefined control sequence. l.9783 \code {\LinkA{call}{call}} which creates an unevaluated call. ! Undefined control sequence. l.9783 \code{\LinkA {call}{call}} which creates an unevaluated call. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9784 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9786 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9787 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.9790 # # if we already have a list (e.g., a data frame) ! You can't use `macro parameter character #' in vertical mode. l.9790 ## if we already have a list (e.g., a data frame) ! You can't use `macro parameter character #' in horizontal mode. l.9791 # # we need c() to add further arguments ! You can't use `macro parameter character #' in horizontal mode. l.9791 ## we need c() to add further arguments ! You can't use `macro parameter character #' in vertical mode. l.9797 # # examples of where objects will be found. ! You can't use `macro parameter character #' in vertical mode. l.9797 ## examples of where objects will be found. ! Missing $ inserted. $ l.9799 f <- function(x) print(x^ 2) ! You can't use `macro parameter character #' in math mode. l.9804 f(A) # 2 ! You can't use `macro parameter character #' in math mode. l.9805 do.call("f", list(A)) # 2 ! You can't use `macro parameter character #' in math mode. l.9806 do.call("f", list(A), envir = env) # 4 ! You can't use `macro parameter character #' in math mode. l.9807 do.call(f, list(A), envir = env) # 2 ! You can't use `macro parameter character #' in math mode. l.9808 do.call("f", list(quote(A)), envir = env) # 100 ! You can't use `macro parameter character #' in math mode. l.9809 do.call(f, list(quote(A)), envir = env) # 10 ! You can't use `macro parameter character #' in math mode. l.9810 ...("f", list(as.name("A")), envir = env) # 100 ! Missing $ inserted. $ l.9811 Underfull \hbox (badness 10000) in paragraph at lines 9797--9811 []\OT1/cmr/m/n/10 examples of where ob-jects will be found. Underfull \hbox (badness 10000) in paragraph at lines 9797--9811 \OT1/cmr/m/n/10 A <- 2 f <- func-tion(x) print(x$[])\OML/cmm/m/it/10 env < Underfull \hbox (badness 1314) in paragraph at lines 9797--9811 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 print\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1 /cmr/m/n/10 )\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 A\OT1/cmr/m/n/ 10 )2\OML/cmm/m/it/10 do:call\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 f\OT1/cmr/m/n/1 0 "\OML/cmm/m/it/10 ; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 A\OT1/cmr/m/n/10 )) 2\OML/cmm/m/it/10 do:call\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 "\ OML/cmm/m/it/10 ; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 A\OT1/cmr/m/n/10 )\OML/ cmm/m/it/10 ; envir \OT1/cmr/m/n/10 = Underfull \hbox (badness 3396) in paragraph at lines 9797--9811 \OML/cmm/m/it/10 env\OT1/cmr/m/n/10 )4\OML/cmm/m/it/10 do:call\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 f; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 A\OT1/cmr/m/n/10 )\OM L/cmm/m/it/10 ; envir \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 env\OT1/cmr/m/n/10 )2\ OML/cmm/m/it/10 do:call\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 "\OM L/cmm/m/it/10 ; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 quote\OT1/cmr/m/n/10 (\OM L/cmm/m/it/10 A\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 ; envir \OT1/cmr/m/n/10 = Overfull \hbox (43.2453pt too wide) in paragraph at lines 9797--9811 \OML/cmm/m/it/10 env\OT1/cmr/m/n/10 )100\OML/cmm/m/it/10 do:call\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 f; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 quote\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 A\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 ; envir \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 env\OT1/cmr/m/n/10 )10\OML/cmm/m/it/10 do:call\OT1/cmr/m/n/ 10 ("\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; list\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 as:name\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 A\OT1/cmr/m/n/10 ") )\OML/cmm/m/it/10 ; envir \OT1/cmr/m/n/10 = [97 [46]]] ! You can't use `macro parameter character #' in horizontal mode. l.9812 eval(call("f", A)) # 2 ! You can't use `macro parameter character #' in horizontal mode. l.9813 eval(call("f", quote(A))) # 2 ! You can't use `macro parameter character #' in horizontal mode. l.9814 eval(call("f", A), envir = env) # 4 ! You can't use `macro parameter character #' in horizontal mode. l.9815 eval(call("f", quote(A)), envir = env) # 100 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9816 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9817 \end{Examples} ! Undefined control sequence. l.9818 \HeaderA {dontCheck}{Identity Function to Suppress Checking}{dontCheck} ! Undefined control sequence. l.9819 \keyword {programming}{dontCheck} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9821 \begin{Description} \relax ! Undefined control sequence. l.9822 The \code {dontCheck} function is the same as \code{\LinkA{identity}{i... ! Undefined control sequence. l.9822 ...dontCheck} function is the same as \code {\LinkA{identity}{identity... ! Undefined control sequence. l.9822 ...ck} function is the same as \code{\LinkA {identity}{identity}}, but ! Undefined control sequence. l.9823 is interpreted by \command {R CMD check} code analysis as a directive ! Undefined control sequence. l.9824 to suppress checking of \code {x}. Currently this is only used by ! Undefined control sequence. l.9825 \code {\LinkA{checkFF}{checkFF}(registration = TRUE)} ! Undefined control sequence. l.9825 \code{\LinkA {checkFF}{checkFF}(registration = TRUE)} ! Undefined control sequence. l.9826 when checking the \code {.NAME} argument of foreign function calls. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9827 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9829 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9833 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9835 \begin{Arguments} ! LaTeX Error: Environment ldescription un [47defined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9836 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9837 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.9837 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9838 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9839 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9841 \begin{SeeAlso} \relax ! Undefined control sequence. l.9842 \code {suppressForeignCheck} which explains why that and ! Undefined control sequence. l.9843 \code {dontCheck} are undesirable and should be avoided if at all ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9845 \end{SeeAlso} ! Undefined control sequence. l.9846 \HeaderA {double}{Double-Precision Vectors}{double} ! Undefined control sequence. l.9847 \aliasA {as.double}{double}{as.double} ! Undefined control sequence. l.9848 \aliasA {as.single}{double}{as.single} ! Undefined control sequence. l.9849 \methaliasA {as.single.default}{double}{as.single.default} ! Undefined control sequence. l.9850 \aliasA {is.double}{double}{is.double} ! Undefined control sequence. l.9851 \aliasA {single}{double}{single} ! Undefined control sequence. l.9852 \keyword {classes}{double} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9854 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9856 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9858 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 9837--9859 \OT1/cmr/m/n/10 Precision Vec-tors-dou-ble as.doubledoubleas.double as.singledo ubleas.single Underfull \hbox (badness 10000) in paragraph at lines 9837--9859 \OT1/cmr/m/n/10 as.single.defaultdoubleas.single.default is.doubledoubleis.doub le sin-gle-dou- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9867 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9869 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9870 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9871 \item[\code{length}] A non-negative integer specifying the desired le... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9874 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9875 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9876 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9877 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9879 \begin{Details} \relax ! Undefined control sequence. l.9880 \code {double} creates a double-precision vector of the specified ! Undefined control sequence. l.9881 ...nts of the vector are all equal to \code {0}. ! Undefined control sequence. l.9882 It is identical to \code {\LinkA{numeric}{numeric}}. ! Undefined control sequence. l.9882 It is identical to \code{\LinkA {numeric}{numeric}}. ! Undefined control sequence. l.9884 \code {as.double} is a generic function. It is identical to ! Undefined control sequence. l.9885 \code {as.numeric}. Methods should return an object of base type ! Undefined control sequence. l.9886 \code {"double"}. ! Undefined control sequence. l.9888 \code {is.double} is a test of double \LinkA{type}{type}. ! Undefined control sequence. l.9888 \code{is.double} is a test of double \LinkA {type}{type}. ! Undefined control sequence. \R l.9891 stored in double precision format} . The functions \code{as.single} ! Undefined control sequence. l.9891 ... precision format}. The functions \code ] [62 {as.single} ! Undefined control sequence. l.9892 and \code {single} are identical to \code{as.double} and \code{double} ! Undefined control sequence. l.9892 and \code{single} are identical to \code {as.double} and \code{double} ! Undefined control sequence. l.9892 ... identical to \code{as.double} and \code {double} ! Undefined control sequence. l.9893 except they set the attribute \code {Csingle} that is used in the ! Undefined control sequence. l.9894 \code {\LinkA{.C}{.C}} and \code{\LinkA{.Fortran}{.Fortran}} interface... ! Undefined control sequence. l.9894 \code{\LinkA {.C}{.C}} and \code{\LinkA{.Fortran}{.Fortran}} interface... ! Undefined control sequence. l.9894 \code{\LinkA{.C}{.C}} and \code {\LinkA{.Fortran}{.Fortran}} interface... ! Undefined control sequence. l.9894 \code{\LinkA{.C}{.C}} and \code{\LinkA {.Fortran}{.Fortran}} interface... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9896 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9898 \begin{Value} ! Undefined control sequence. l.9899 \code {double} creates a double-precision vector of the specified ! Undefined control sequence. l.9900 ...nts of the vector are all equal to \code {0}. ! Undefined control sequence. l.9902 \code {as.double} attempts to coerce its argument to be of double type: ! Undefined control sequence. l.9903 like \code {\LinkA{as.vector}{as.vector}} it strips attributes includi... ! Undefined control sequence. l.9903 like \code{\LinkA {as.vector}{as.vector}} it strips attributes includi... ! Undefined control sequence. l.9905 attributes, use \code {\LinkA{storage.mode}{storage.mode}}.) Characte... ! Undefined control sequence. l.9905 attributes, use \code{\LinkA {storage.mode}{storage.mode}}.) Characte... ! Undefined control sequence. l.9908 \code {0x} or \code{0X}) can be converted, as can special values such ! Undefined control sequence. l.9908 \code{0x} or \code {0X}) can be converted, as can special values such ! Undefined control sequence. l.9909 as \code {"NA"}, \code{"NaN"}, \code{"Inf"} and \code{"infinity"}, ! Undefined control sequence. l.9909 as \code{"NA"}, \code {"NaN"}, \code{"Inf"} and \code{"infinity"}, ! Undefined control sequence. l.9909 as \code{"NA"}, \code{"NaN"}, \code {"Inf"} and \code{"infinity"}, ! Undefined control sequence. l.9909 ..."}, \code{"NaN"}, \code{"Inf"} and \code {"infinity"}, ! Undefined control sequence. l.9912 \code {as.double} for factors yields the codes underlying the factor ! Undefined control sequence. l.9914 \code {\LinkA{factor}{factor}}. ! Undefined control sequence. l.9914 \code{\LinkA {factor}{factor}}. ! Undefined control sequence. l.9916 \code {is.double} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.9916 \code{is.double} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.9916 ...{is.double} returns \code{]TRUE} or \code {FALSE} depending on ! Undefined control sequence. l.9917 whether its argument is of double \LinkA {type}{type} or not. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9918 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9920 \begin{Section} {Double-precision values} ! Undefined control sequence. l.9921 All \R {} platforms are required to work with values conforming to the ! Undefined control sequence. l.9924 of absolute values from about \eqn {2 \times 10^{-308}}{} to ! Missing $ inserted. $ l.9924 of absolute values from about \eqn{2 \times 10^{-308}}{} to ! Extra }, or forgotten $. l.9924 ...lues from about \eqn{2 \times 10^{-308}} {} to ! Undefined control sequence. l.9925 \eqn {2 \times 10^{308}}{}. It also has special values ! Undefined control sequence. l.9926 \code {\LinkA{NaN}{NaN}} (many of them), plus and minus infinity and p... ! Undefined control sequence. l.9926 \code{\LinkA {NaN}{NaN}} (many of them), plus and minus infinity and p... ! Undefined control sequence. l.9927 minus zero (although \R {} acts as if these are the same). There are ! Missing $ inserted. $ l.9931 Underfull \hbox (badness 1308) in paragraph at lines 9916--9931 \OT1/cmr/m/n/10 as IEEE 754) stan-dard. This ba-si-cally works with a pre-ci-si on of 53 Overfull \hbox (920.14249pt too wide) in paragraph at lines 9916--9931 \OMS/cmsy/m/n/10 ^^B\OT1/cmr/m/n/10 10[][]\OML/cmm/m/it/10 to[][]:Italsohasspec ialvalues[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 manyofthem\OT1/cmr/m/n/10 )\OML/cm m/m/it/10 ; plusandminusinfinityandplusandminuszero\OT1/cmr/m/n/10 (\OML/cmm/m/ it/10 although[]actsasifthesearethesame\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :There arealso[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 or[]\OT1/cmr/m/n/10 )\OML/cmm/m/it/1 0 numberswithabsolutevaluesaboveorbelowtherangegivenabovebutrepresentedtolesspr ecision:$ [98 Chapter 2 [63] [48] ! Undefined control sequence. l.9932 See \code {\LinkA{.Machine}{.Machine}} for precise information on thes... ! Undefined control sequence. l.9932 See \code{\LinkA {.Machine}{.Machine}} for precise information on thes... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9937 \end{Section} ! Missing } inserted. } l.9937 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9939 \begin{Section} {Note on names} ! Undefined control sequence. l.9940 It is a historical anomaly that \R {} has two names for its ! Undefined control sequence. l.9941 floating-point vectors, \code {\LinkA{double}{double}} and \code{\Link... ! Undefined control sequence. l.9941 floating-point vectors, \code{\LinkA {double}{double}} and \code{\Link... ! Undefined control sequence. l.9941 ... \code{\LinkA{double}{double}} and \code {\LinkA{numeric}{numeric}} ! Undefined control sequence. l.9941 ...\LinkA{double}{double}} and \code{\LinkA {numeric}{numeric}} ! Undefined control sequence. l.9942 (and formerly had \code {real}). ! Undefined control sequence. l.9944 \code {double} is the name of the \LinkA{type}{type}. ! Undefined control sequence. l.9944 \code{double} is the name of the \LinkA {type}{type}. ! Undefined control sequence. l.9945 \code {numeric} is the name of the \LinkA{mode}{mode} and also of the ... ! Undefined control sequence. l.9945 \code{numeric} is the name of the \LinkA {mode}{mode} and also of the ... ! Undefined control sequence. l.9946 \LinkA {class}{class}. As an S4 formal class, use \code{"numeric"}. ! Undefined control sequence. l.9946 ...lass}. As an S4 formal class, use \code {"numeric"}. ! Undefined control sequence. l.9948 The potential confusion is that \R {} has used \emph{\LinkA{mode}{mode}} ! Undefined control sequence. \LinkA l.9948 ... \R{} has used \emph{\LinkA{mode}{mode}} ! Undefined control sequence. l.9949 \code {"numeric"} to mean `double or integer', which conflicts ! Undefined control sequence. l.9950 with the S4 usage. Thus \code {is.numeric} tests the mode, not the ! Undefined control sequence. l.9951 class, but \code {as.numeric} (which is identical to \code{as.double}) ! Undefined control sequence. l.9951 ...as.numeric} (which is identical to \code {as.double}) ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9953 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9955 \begin{References} \relax ! Undefined control sequence. l].9960 \url {https://en.wikipedia.org/wiki/IEEE_754-1985}, ! Missing $ inserted. $ l.9960 \url{https://en.wikipedia.org/wiki/IEEE_ 754-1985}, ! Extra }, or forgotten $. l.9960 ...s://en.wikipedia.org/wiki/IEEE_754-1985} , ! Undefined control sequence. l.9961 \url {https://en.wikipedia.org/wiki/IEEE_754-2008}, ! Undefined control sequence. l.9962 \url {https://en.wikipedia.org/wiki/Double_precision}, ! Undefined control sequence. l.9963 \url {https://en.wikipedia.org/wiki/Denormal_number}. ! Missing $ inserted. $ l.9964 Overfull \hbox (549.73746pt too wide) in paragraph at lines 9960--9964 []\OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/IEEE$[]54 \OMS/cmsy/m/n/10 ^^@ \OT1/cmr/m/n/10 1985\OML/cmm/m/it/10 ; []; []; []:$ ! Undefined control sequence. l.9965 \url {http://grouper.ieee.org/groups/754/} for links to information ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9967 \end{References} ! Missing } inserted. } l.9967 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9969 \begin{SeeAlso} \relax ! Undefined control sequence. l.9970 \code {\LinkA{integer}{integer}}, \code{\LinkA{numeric}{numeric}}, \co... ! Undefined control sequence. l.9970 \code{\LinkA {integer}{integer}}, \code{\LinkA{numeric}{numeric}}, \co... ! Undefined control sequence. l.9970 \code{\LinkA{integer}{integer}}, \code {\LinkA{numeric}{numeric}}, \co... ! Undefined control sequence. l.9970 ...{\LinkA{integer}{integer}}, \code{\LinkA {numeric}{numeric}}, \code... ! Undefined control sequence. l.9970 ..., \code{\LinkA{numeric}{numeric}}, \code {\LinkA{storage.mode}{stor... ! Undefined control sequence. l.9970 ...{\LinkA{numeric}{numeric}}, \code{\LinkA {storage.mode}{storage.mod... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9971 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9973 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9974 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9977 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [64 l.9978 \end{Examples} ! Undefined control sequence. l.9979 \HeaderA {dput}{Write an Object to a File or Recreate it}{dput} ! Undefined control sequence. l.9980 \aliasA {dget}{dput}{dget} ! Undefined control sequence. l.9981 \keyword {file}{dput} ! Undefined control sequence. l.9982 \keyword {programming}{dput} ! Undefined control sequence. l.9983 \keyword {connection}{dput} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9985 \begin{Description} \relax ! Undefined control sequence. l.9986 ...es an ASCII text representation of an \R {} object to a file ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9988 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9990 \begin{Usage} Underfull \hbox (badness 3884) in paragraph at lines 9965--9991 []\OT1/cmr/m/n/10 http://grouper.ieee.org/groups/754/ for links to in-for-ma-ti on on the Underfull \hbox (badness 1127) in paragraph at lines 9965--9991 \OT1/cmr/m/n/10 stan-dards. in-te-gerin-te-ger, nu-mer-ic-nu-meric, stor-age.m odestorage.mode. ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9997 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9999 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10000 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10001 \item[\code{x}] an object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10002 \item[\code{file}] either a character string naming a file or a ! Undefined control sequence. l.10003 \LinkA {connection}{connection}. \code{""} indicates output to the co... ! Undefined control sequence. l.10003 \LinkA{connection}{connection}. \code {""} indicates output to the co... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10004 \item[\code{control}] character vector indicating depar [49sing options. ! Undefined control sequence. l.10005 See \code {\LinkA{.deparseOpts}{.deparseOpts}} for their description. ! Undefined control sequence. l.10005 See \code{\LinkA {.deparseOpts}{.deparseOpts}} for their description. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10006 \item[\code{keep.source}] logical: should the source formatting be r... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10008 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10009 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10011 \begin{Details} \relax ! Undefined control sequence. l.10012 \code {dput} opens \code{file} and deparses the object \code{x} into ! Undefined control sequence. l.10012 \code{dput} opens \code {file} and deparses the object \code{x} into ! Undefined control sequence. l.10012 ...ode{file} and deparses the object \code {x} into ! Undefined control sequence. l.10013 ...bject name is not written (unlike \code {dump}). ! Undefined control sequence. l.10014 If \code {x} is a function the associated environment is stripped. ! Undefined control sequence. l.10018 default \code {control}, \code{dput()} attempts to deparse in a way ! Undefined control sequence. l.10018 default \code{control}, \code {dput()} attempts to deparse in a way ! Undefined control sequence. l.10020 \code {\LinkA{dump}{dump}}, not likely ! Undefined control sequence. l.10020 \code{\LinkA {dump}{dump}}, not likely ! Undefined control sequence. l.10021 ...s identical to the original. Use \code {control = "all"} ! Undefined control sequence. l.10022 for the most complete deparsing; use \code {control = NULL} for the ! Undefined control sequence. l.10025 \code {dput} will warn if fewer characters were written to a file than ! Undefined control sequence. l.10029 representation include \code {"useSource"} in \code{control}. \R{} ! Undefined control sequence. l.10029 ...ion include \code{"useSource"} in \code {control}. \R{} ! Undefined control sequence. l.10029 ...ode{"useSource"} in \code{control}. \R {} ! Undefined control sequence. l.10032 set \code {options(keep.source = FALSE}) when calling \code{source}. ! Undefined control sequence. l.10032 ...eep.source = FALSE}) when calling \code {source}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10033 \end{Details} ] ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10035 \begin{Value} ! Undefined control sequence. l.10036 For \code {dput}, the first argument invisibly. [99] Chapter 11 [50]] ! Undefined control sequence. l.10038 For \code {dget}, the object created. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10039 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10041 \begin{Note} \relax ! Undefined control sequence. l.10042 This is \bold {not} a good way to transfer objects between \R{} sessi... ! Undefined control sequence. l.10042 ...good way to transfer objects between \R {} sessions. ! Undefined control sequence. l.10043 \code {\LinkA{dump}{dump}} is better, but the function \code{\LinkA{s... ! Undefined control sequence. l.10043 \code{\LinkA {dump}{dump}} is better, but the function \code{\LinkA{s... ! Undefined control sequence. l.10043 ...ump}} is better, but the function \code {\LinkA{save}{save}} is ! Undefined control sequence. l.10043 ...s better, but the function \code{\LinkA {save}{save}} is ! Undefined control sequence. l.10044 designed to be used for transporting \R {} data, and will work with \R{} ! Undefined control sequence. l.10044 ...orting \R{} data, and will work with \R {} ! Undefined control sequence. l.10045 objects that \code {dput} does not handle correctly as well as being ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10051 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10053 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10057 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10059 \begin{SeeAlso} \relax ! Undefined control sequence. l.10060 \code {\LinkA{deparse}{deparse}}, \code{\LinkA{dump}{dump}}, \code{\L... ! Undefined control sequence. l.10060 \code{\LinkA {deparse}{deparse}}, \code{\LinkA{dump}{dump}}, \code{\L... ! Undefined control sequence. l.10060 \code{\LinkA{deparse}{deparse}}, \code {\LinkA{dump}{dump}}, \code{\L... ! Undefined control sequence. l.10060 ...\LinkA{deparse}{deparse}}, \code{\LinkA {dump}{dump}}, \code{\Link... ! Undefined control sequence. l.10060 ...rse}}, \code{\LinkA{dump}{dump}}, \code {\LinkA{write}{write}}. ! Undefined control sequence. l.10060 ...\code{\LinkA{dump}{dump}}, \code{\LinkA {write}{write}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX [65 manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10061 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10063 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10064 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10065 # # Write an ASCII version of function mean to the file "foo" ! You can't use `macro parameter character #' in horizontal mode. l.10065 ## Write an ASCII version of function mean to the file "foo" ! You can't use `macro parameter character #' in horizontal mode. l.10067 # # And read it back into 'bar' ! You can't use `macro parameter character #' in horizontal mode. l.10067 ## And read it back into 'bar' ! You can't use `macro parameter character #' in horizontal mode. l.10069 # # Create a function with comments ! You can't use `macro parameter character #' in horizontal mode. l.10069 ## Create a function with comments ! You can't use `macro parameter character #' in horizontal mode. l.10071 # Subtract from one ! You can't use `macro parameter character #' in horizontal mode. l.10074 # # and display it ! You can't use `macro parameter character #' in horizontal mode. l.10074 ## and display it ! You can't use `macro parameter character #' in horizontal mode. l.10076 # # and now display the saved source ! You can't use `macro parameter character #' in horizontal mode. l.10076 ## and now display the saved source ! You can't use `macro parameter character #' in vertical mode. l.10079 # # Numeric values: ! You can't use `macro parameter character #' in vertical mode. l.10079 ## Numeric values: ! Missing $ inserted. $ l.10080 xx <- pi^ (1:3) ! You can't use `macro parameter character #' in math mode. l.10084 dput(xx, "foo"); dget("foo") - xx # slight rounding on all platforms ! You can't use `macro parameter character #' in math mode. l.10086 dget("foo") - xx # slight rounding on some platforms ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10089 \end{ExampleCode} ! Missing $ inserted. $ l.10089 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10090 \end{Examples} ! Undefined control sequence. l.10091 \HeaderA {drop}{Drop Redundant Extent Information}{drop} ! Undefined control sequence. l.10092 \keyword {array}{drop} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10094 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion [51 for explanation. Type H for immediate help. ... l.10096 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10098 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 10079--10099 []\OT1/cmr/m/n/10 Numeric val-ues: xx <- pi$[]1 : 3)\OML/cmm/m/it/10 dput\OT1/c mr/m/n/10 (\OML/cmm/m/it/10 xx\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 dput\OT1/cmr/m/ n/10 (\OML/cmm/m/it/10 xx; control \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 10079--10099 \OML/cmm/m/it/10 xxslightroundingonallplatformsdput\OT1/cmr/m/n/10 (\OML/cmm/m/ it/10 xx; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 foo\OT1/cmr/m/n/10 "\OML/cmm/m/it/1 0 ; control \OT1/cmr/m/n/10 = Overfull \hbox (34.23724pt too wide) in paragraph at lines 10079--10099 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 digits\OT1/cmr/m/n/10 17")\OML/cmm/m/it/10 dg et\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 foo\OT1/cmr/m/n/10 ") \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 xxslightroundingonsomeplatformsdput\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 xx; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 foo\OT1/cmr/m/n/10 "\OML/cmm/m/it /10 ; control \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10102 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10104 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10105 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10106 \item[\code{x}] an array (including a matrix). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10107 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10108 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10110 \begin{Value} ! Undefined control sequence. l.10111 If \code {x} is an object with a \code{dim} attribute (e.g., a matrix ! Undefined control sequence. l.10111 If \code{x} is an object with a \code {dim} attribute (e.g., a matrix ! Undefined control sequence. l.10112 or \code {\LinkA{array}{array}}), then \code{drop} returns an object ... ! Undefined control sequence. l.10112 or \code{\LinkA {arr]ay}{array}}), then \code{drop} returns an object ... ! Undefined control sequence. l.10112 ...code{\LinkA{array}{array}}), then \code {drop} returns an object like ! Undefined control sequence. l.10113 \code {x}, but with any extents of length one removed. Any ! Undefined control sequence. l.10114 accompanying \code {dimnames} attribute is adjusted and returned with ! Undefined control sequence. l.10115 \code {x}: if the result is a vector the \code{names} are taken from ! Undefined control sequence. l.10115 ...x}: if the result is a vector the \code {names} are taken from ! Undefined control sequence. l.10116 the \code {dimnames} (if any). If the result is a length-one vector, ! Undefined control sequence. l.10119 Array subsetting (\code {\LinkA{[}{[}}) performs this reduction unles... ! Undefined control sequence. l.10119 Array subsetting (\code{\LinkA {[}{[}}) performs this reduction unles... ! Undefined control sequence. l.10120 with \code {drop = FALSE}, but sometimes it is useful to invoke ! Undefined control sequence. l.10121 \code {drop} directly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10122 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10124 \begin{SeeAlso} \relax ! Undefined control sequence. l.10125 \code {\LinkA{drop1}{drop1}} which is used for dropping terms in models. ! Undefined control sequence. l.10125 \code{\LinkA {drop1}{drop1}} which is used for dropping terms in models. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10126 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10128 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10129 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10130 ...array(1:12, dim = c(1,3,1,1,2,1,2)))) # = 3 2 2 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10132 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10133 \end{Examples} ! Undefined control sequence. l.10134 \HeaderA {droplevels}{Drop Unused Levels from Factors}{droplevels} ! Undefined control sequence. l.10135 \methaliasA {droplevels.data.fram]e}{droplevels}{droplevels.data.frame} ! Undefined control sequence. l.10136 \methaliasA {droplevels.factor}{droplevels}{droplevels.factor} ! Undefined control sequence. l.10137 \keyword {category}{droplevels} ! Undefined control sequence. l.10138 \keyword {NA}{droplevels} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10140 \begin{Description} \relax ! Undefined control sequence. l.10141 The function \code {droplevels} is used to drop unused levels from a ! Undefined control sequence. l.10142 \code {\LinkA{factor}{factor}} or, more commonly, from factors in a d... ! Undefined control sequence. l.10142 \code{\LinkA {factor}{factor}} or, more commonly, from factors in a d... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10143 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10145 \begin{Usage} Underfull \hbox (badness 6078) in paragraph at lines 10119--10146 \OT1/cmr/m/n/10 droplevels.factordroplevelsdroplevels.factor cat-e-go-ry-drople vels NAdroplevels ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10152 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10154 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10155 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10156 \item[\code{x}] an object from which to drop unused factor levels. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10157 \item[\code{exclude}] passed to \code{\LinkA{factor}{factor}()}; fac... ! Undefined control sequence. l.10157 \item[\code{exclude}] passed to \code {\LinkA{factor}{factor}()}; fac... ! Undefined control sequence. l.10157 ...[\code{exclude}] passed to \code{\LinkA {factor}{factor}()}; facto... ! Undefined control sequence. l.10159 was \emph{implicitly} \code {NA} in \R{} <= 3.3.1 which did drop ! Undefined control sequence. l.10159 was \emph{implicitly} \code{NA} in \R {} <= 3.3.1 which did drop ! Undefined control sequence. l.10160 \code {NA} levels even when present in \code{x}, contrary to the ! Undefined control sequence. l.10160 ...e{NA} levels even when present in \code {x}, contrary to the ! Undefined control sequence. l.10161 ...urrent default is compatible with \code {x[ , drop=TRUE]}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10162 \item[\code{...}] further arguments passed to methods [100 [66 [52]]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10163 \item[\code{except}] indices of columns from which \emph{not} to dro... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10164 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10165 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10167 \begin{Details} \relax ! Undefined control sequence. l.10168 The method for class \code {"factor"} is currently equivalent to ! Undefined control sequence. l.10169 \code {factor(x, exclude=exclude)}. For the data frame method, you ! Undefined control sequence. l.10170 should rarely specify \code {exclude} ``globally'' for all factor ! Undefined control sequence. l.10172 \code {exclude} as the factor method itself. ! Undefined control sequence. l.10174 The \code {except} argument follow the usual indexing rules. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10175 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10177 \begin{Value} ! Undefined control sequence. l.10178 \code {droplevels} returns an object of the same class as \code{x} ! Undefined control sequence. l.10178 ...ns an object of the same class as \code {x} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10179 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10181 \begin{Note} \relax ! Undefined control sequence. l.10187 data frame, but the \code {except} argument allows you to specify ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10189 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10191 \begin{SeeAlso} \relax ! Undefined control sequence. l.10192 \code {\LinkA{subset}{subset}} for subsetting data frames. ! Undefined control sequence. l.10192 \code{\LinkA {subset}{subset}} for subsetting data frames. ! Undefined control sequence. l.10193 \code {\LinkA{factor}{factor}} for definition of factors. ! Undefined control sequence. l.10193 \code{\LinkA {factor}{factor}} for definition of factors. ! Undefined control sequence. l.10194 \code {\LinkA{drop}{drop}} for dropping array dimensions. ! Undefined control sequence. l.10194 \code{\LinkA {drop}{drop}} for dropping array dimensions. ! Undefined control sequence. l.10195 \code {\LinkA{drop1}{drop1}} for dropping terms from a model. ! Undefined control sequence. l.10195 \code{\LinkA {drop1}{drop1}} for dropping terms from a model. ! Undefined control sequence. l.10196 \code {\LinkA{[.factor}{[.factor}} for subsetting of factors. ! Undefined control sequence. l.10196 \code{\LinkA {[.factor}{[.factor}} for subsetting of factors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10197 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10199 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10200 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10205 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10206 \end{Examples} ! Undefined control sequence. l.10207 \HeaderA {dump}{Text Representations of R Objects}{dump} ! Undefined control sequence. l.10208 \keyword {file}{dump} ! Undefined control sequence. l.10209 \keyword {connection}{dump} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10211 \begin{Description} \relax ! Undefined control sequence. l.10212 ... function takes a vector of names of \R {} objects and produces ! Undefined control sequence. l.10214 A \code {dump} file can usually be \code{\LinkA{source}{source}}d int... ! Undefined control sequence. l.10214 A \code{dump} file can usually be \code {\LinkA{source}{source}}d int... ! Undefined control sequence. l.10214 ...{dump} file can usually be \code{\LinkA {source}{source}}d into an... ! Undefined control sequence. l.10215 \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [67 l.10216 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10218 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10223 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10225 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10226 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10227 \item[\code{list}] character vector. The names of one or more \R{} ... ! Undefined control sequence. l.10227 ...er vector. The names of one or more \R {} objects to be dumped. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10229 \item[\code{file}] either a character string naming a file or a ! Undefined control sequence. l.10230 \LinkA {connection}{connection}. \code{""} indicates output to the c... ! Undefined control sequence. l.10230 \LinkA{connection}{connection}. \code {""} indicates output to the c... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10232 \item[\code{append}] if \code{TRUE} and \code{file} is a character s... ! Undefined control sequence. l.10232 \item[\code{append}] if \code {TRUE} and \code{file} is a character s... ! Undefined control sequence. l.10232 ...\code{append}] if \code{TRUE} and \code {file} is a character string, ! Undefined control sequence. l.10233 output will be appended to \code {file}; otherwise, it will overwrite ! Undefined control sequence. l.10234 the contents of \code {file}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10236 \item[\code{control}] character vector indicating deparsing options. ! Undefined control sequence. l.10237 See \code {\LinkA{.deparseOpts}{.deparseOpts}} for their description. ! Undefined control sequence. l.10237 See \code{\LinkA {.deparseOpts}{.deparseOpts}} for their description. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion ] [53for explanation. Type H for immediate help. ... l.10239 \item[\code{envir}] the environment to search for objects. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10241 \item[\code{evaluate}] logical. Should promises be evaluated? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10242 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10243 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10245 \begin{Details} \relax ! Undefined control sequence. l.10247 omitted, with a warning. If \code {file} is a file and no objects ! Undefined control sequence. l.10250 \code {source}ing may not produce an identical copy of ! Undefined control sequence. l.10251 \code {dump}ed objects. A warning is issued if it is likely that ! Undefined control sequence. l.10255 \code {dump} will also warn if fewer characters were written to a file ! Undefined control sequence. l.10258 A \code {dump} file can be \code{\LinkA{source}{source}}d into anothe... ! Undefined control sequence. l.10258 A \code{dump} file can be \code {\LinkA{source}{source}}d into anothe... ! Undefined control sequence. l.10258 A \code{dump} file can be \code{\LinkA {source}{source}}d into anothe... ! Undefined control sequence. l.10258 ...LinkA{source}{source}}d into another \R {} (or ! Undefined control sequence. l.10259 perhaps S) session, but the function \code {\LinkA{save}{save}} is de... ! Undefined control sequence. l.10259 ... session, but the function \code{\LinkA {save}{save}} is designed to ! Undefined control sequence. l.10260 be used for transporting \R {} data, and will work with \R{} objects ... ! Undefined control sequence. l.10260 ...orting \R{} data, and will work with \R {} objects that ! Undefined control sequence. l.10261 \code {dump} does not handle. For maximal reproducibility use ! Undefined control sequence. l.10262 \code {control = c("all", "hexNumeric")}. ! Undefined control sequence. l.10265 \code {control = NULL}. This will skip attributes, and will make other ! Undefined control sequence. l.10266 simplifications that make \code {source} less likely to produce an ! Undefined control sequence. l.10267 identical copy. See \code {\LinkA{deparse}{deparse}} for details. ! Undefined control sequence. l.10267 identical copy. See \code{\LinkA {deparse}{deparse}} for details. ! Undefined control sequence. l.10270 displaying the saved source, use \code {control = c("keepInteger", [101]] ! Undefined control sequence. l.10276 lazy-loading (when the default \code {evaluate = TRUE} is essential) ! Undefined control sequence. l.10277 and after the use of \code {\LinkA{delayedAssign}{delayedAssign}}, ! Undefined control sequence. l.10277 and after the use of \code{\LinkA {delayedAssign}{delayedAssign}}, ! Undefined control sequence. l.10278 when \code {evaluate = FALSE} might be intended. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10279 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10281 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10284 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10286 \begin{Note} \relax ! Undefined control sequence. l.10287 As \code {dump} is defined in the base namespace, the \pkg{base} ! Undefined control sequence. l.10287 ...defined in the base namespace, the \pkg {base} ! Undefined control sequence. l.10289 \code {dump} is called from the top level prompt or the \code{envir} ! Undefined control sequence. l.10289 ... from the top level prompt or the \code {envir} ! Undefined control sequence. l.10297 of type \code {S4} are not deparsed in a way that can be ! Undefined control sequence. l.10298 \code {source}d. In addition, \LinkA{language objects}{language obje... ! Undefined control sequence. l.10298 \code{source}d. In addition, \LinkA {language objects}{language obje... ! Undefined control sequence. l.10299 simple way whatever the value of \code {control}, and this includes not ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10301 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10303 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10307 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10309 \begin{SeeAlso} \relax ! Undefined control sequence. l.10310 \code {\LinkA{dput}{dput}}, \code{\LinkA{dget}{dget}}, \code{\LinkA{w... ! Undefined control sequence. l.10310 \code{\LinkA {dput}{dput}}, \code{\LinkA{dget}{dget}}, \code{\LinkA{w... ! Undefined control sequence. l.10310 \code{\LinkA{dput}{dput}}, \code {\LinkA{dget}{dget}}, \code{\LinkA{w... ! Undefined control sequence. l.10310 \code{\LinkA{dput}{dput}}, \code{\LinkA {dget}{dget}}, \code{\LinkA{w... ! Undefined control sequence. l.10310 ...put}}, \code{\LinkA{dget}{dget}}, \code {\LinkA{write}{write}}.\\{} ! Undefined control sequence. l.10310 ...\code{\LinkA{dget}{dget}}, \code{\LinkA {write}{write}}.\\{} ! Undefined control sequence. l.10311 \code {\LinkA{save}{save}} for a more reliable way to save \R{} objects. ! Undefined control sequence. l.10311 \code{\LinkA {save}{save}} for a more reliable way to save \R{} objects. ! Undefined control sequence. l.10311 ...ve}} for a more reliable way to save \R {} objects. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10312 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10314 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10315 \begin{ExampleCode} ! Missing $ inserted. $ l.10317 dump(ls(pattern = '^ [xyz]'), "xyz.Rdmped") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10320 \end{ExampleCode} ! Missing $ inserted. $ l.10320 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10321 \end{Examples} ! Undefined control sequence. l.10322 \HeaderA {duplicated}{Determine Duplicate Elements}{duplicated} ! Undefined control sequence. l.10323 \aliasA {anyDuplicated}{duplicated}{anyDuplicated} ! Undefined control sequence. l.10324 \methaliasA {anyDuplicated.array}{duplicated}{anyDuplicated.array} ! Undefined control sequence. l.10325 \methaliasA {anyDuplicated.data.frame}{duplicated}{anyDuplicated.data... ! Undefined control sequence. l.10326 \methaliasA {anyDuplicated.default}{duplicated}{anyDuplicated.default} ! Undefined control sequence. l.10327 \methaliasA {anyDuplicated.matrix}{duplicated}{anyDuplicated.matrix} ! Undefined control sequence. l.10328 \methaliasA {duplicated.array}{duplicated}{duplicated.array} ! Undefined control sequence. l.10329 \methaliasA {duplicated.data.frame}{duplicated}{duplicated.data.frame} ! Undefined control sequence. l.10330 \methaliasA {duplicated.default}{duplicated}{duplicated.default} ! Undefined control sequence. l.10331 \methaliasA { [68duplicated.matrix}{duplicated}{duplicated.matrix} ! Undefined control sequence. l.10332 \keyword {logic}{duplicated} ! Undefined control sequence. l.10333 \keyword {manip}{duplicated} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10335 \begin{Description} \relax ! Undefined control sequence. l.10336 \code {duplicated()} determines which elements of a vector or data Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 savesave for a more re-li-able way to save ob- Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 jects. x <- 1; y <- 1:10 dump(ls(pattern = Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 '$[]\OML/cmm/m/it/10 xyz\OT1/cmr/m/n/10 ][])\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 xyz:Rdmped\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 print\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 :Last:value\OT1/cmr/m/n/10 )\OML/cmm/m/i t/10 unlink\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 xyz:Rdmped\OT1/cmr/m/n/10 ")$ du - Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 pli-cated-De-ter-mine Du-pli-cate El-e-ments-du-pli-cated anyDu -pli-cateddu-pli- Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 catedanyDu-pli-cated anyDu-pli-cated.arrayduplicatedanyDuplicat ed.array Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 anyDu-pli-cated.data.frameduplicatedanyDuplicated.data.frame Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 anyDu-pli-cated.defaultduplicatedanyDuplicated.default Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 anyDu-pli-cated.matrixduplicatedanyDuplicated.matrix Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 du-pli-cated.arrayduplicatedduplicated.array du-pli- Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 cated.data.frameduplicatedduplicated.data.frame du- Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 pli-cated.defaultduplicatedduplicated.default du-pli- Underfull \hbox (badness 10000) in paragraph at lines 10296--10340 \OT1/cmr/m/n/10 cated.matrixduplicatedduplicated.matrix log-icdu-pli-cated ma-n ipdu-pli-cated ! Undefined control sequence. l.10341 \code {anyDuplicated(.)} is a ``generalized'' more efficient ! Undefined control sequence. l.10342 shortcut for \code {any(duplicated(.))}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10343 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10345 \begin{Usage} Underfull \hbox (badness 5847) in paragraph at lines 10341--10346 []\OT1/cmr/m/n/10 anyDuplicated(.) is a ``gen-er-al-ized'' more ef-fi-cient sho rt-cut for [102] [54]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10365 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10367 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10368 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10369 \item[\code{x}] a vector or a data frame or an array or \code{NULL}. ! Undefined control sequence. l.10369 ...or or a data frame or an array or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10370 \item[\code{incomparables}] a vector of values that cannot be compared. ! Undefined control sequence. l.10371 \code {FALSE} is a special value, meaning that all values can be ! Undefined control sequence. l.10374 \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10375 \item[\code{fromLast}] logical indicating if duplication should be c... ! Undefined control sequence. l.10377 elements would correspond to \code {duplicated = FALSE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10378 \item[\code{nmax}] the maximum number of unique items expected (grea... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10379 \item[\code{...}] arguments for particular methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10380 \item[\code{MARGIN}] the array margin to be held fixed: see ! Undefined control sequence. l.10381 \code {\LinkA{apply}{apply}}, and note that \code{MARGIN = 0} maybe u... ! Undefined control sequence. l.10381 \code{\LinkA {apply}{apply}}, and note that \code{MARGIN = 0} maybe u... ! Undefined control sequence. l.10381 ...nkA{apply}{apply}}, and note that \code {MARGIN = 0} maybe useful. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. T [69ype H for immediate help. ... l.10382 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10383 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10385 \begin{Details} \relax ! Undefined control sequence. l.10390 definitions for \code {duplicated} and \code{anyDuplicated}, ! Undefined control sequence. l.10390 ...nitions for \code{duplicated} and \code {anyDuplicated}, ! Undefined control sequence. l.10391 \code {anyDuplicated(x, ...)} is a ``generalized'' shortcut for ! Undefined control sequence. l.10392 \code {any(duplicated(x, ...))}, in the sense that it returns the ! Undefined control sequence. l.10393 \emph{index} \code {i} of the first duplicated entry \code{x[i]} if ! Undefined control sequence. l.10393 ...{i} of the first duplicated entry \code {x[i]} if ! Undefined control sequence. l.10394 there is one, and \code {0} otherwise. Their behaviours may be ! Undefined control sequence. l.10395 different when at least one of \code {duplicated} and ! Undefined control sequence. l.10396 \code {anyDuplicated} has a relevant method. ! Undefined control sequence. l.10398 \code {duplicated(x, fromLast = TRUE)} is equivalent to but faster than ! Undefined control sequence. l.10399 \code {rev(duplicated(rev(x)))}. Underfull \hbox (badness 2285) in paragraph at lines 10398--10400 []\OT1/cmr/m/n/10 duplicated(x, from-Last = TRUE) is equiv-a-lent to but faster than ! Undefined control sequence. l.10402 ...entation of the rows separated by \code {\bsl{}r}, so may be imper... ! Undefined control sequence. l.10402 ...ion of the rows separated by \code{\bsl {}r}, so may be imperfect ! Undefined control sequence. l.10407 specified by \code {MARGIN} if the remaining dimensions are identical ! Undefined control sequence. l.10408 ...se for an earlier (or later, when \code {fromLast = TRUE}) element ! Undefined control sequence. l.10410 ...ws (the default) or columns (with \code {MARGIN = 2}). ! Undefined control sequence. l.10411 Note that \code {MARGIN = 0} returns an array of the same ! Undefined control sequence. l.10412 dimensionality attributes as \code {x}. ! Undefined control sequence. l.10414 Missing values (\code {"\LinkA{NA}{NA}"}) are regarded as equal, nume... ! Undefined control sequence. l.10414 Missing values (\code{"\LinkA {NA}{NA}"}) are regarded as equal, nume... ! Undefined control sequence. l.10415 complex ones differing from \code {NaN}; character strings will be co... ! Undefined control sequence. l.10416 ...mmon encoding''; for details, see \code {\LinkA{match}{match}} (and ! Undefined control sequence. l.10416 ...coding''; for details, see \code{\LinkA {match}{match}} (and ! Undefined control sequence. l.10417 \code {\LinkA{unique}{unique}}) which use the same concept. ! Undefined control sequence. l.10417 \code{\LinkA {unique}{unique}}) which use the same concept. ! Undefined control sequence. l.10419 Values in \code {incomparables} will never be marked as duplicated. ! Undefined control sequence. l.10429 ...gical and raw vectors the default \code {nmax = NA} is ! Undefined control sequence. l.10430 equivalent to \code {nmax = length(x)}. Since a hash table of size ! Undefined control sequence. l.10431 \code {8*nmax} bytes is allocated, setting \code{nmax} suitably can ! Undefined control sequence. l.10431 ...nmax} bytes is allocated, setting \code {nmax} suitably can ! Undefined control sequence. l.10433 the smaller of \code {length(x)} and the number of levels plus one (for ! Undefined control sequence. l.10434 \code {NA}). If \code{nmax} is set too small there is liable to be an ! Undefined control sequence. l.10434 \code{NA}). If \code {nmax} is set too small there is liable to be an ! Undefined control sequence. l.10435 error: \code {nmax = 1} is silently ignored. [103]] [55 ! Undefined control sequence. l.10437 \LinkA {Long vectors}{Long vectors} are supported for the default met... ! Undefined control sequence. l.10438 \code {duplicated}, but may only be usable if \code{nmax} is supplied. ! Undefined control sequence. l.10438 ...cated}, but may only be usable if \code {nmax} is supplied. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10439 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10441 \begin{Value} ! Undefined control sequence. l.10442 \code {duplicated()}: ! Undefined control sequence. l.10444 \code {x}. For a data frame, a logical vector with one element for ! Undefined control sequence. l.10445 ... For a matrix or array, and when \code {MARGIN = 0}, a ! Undefined control sequence. l.10448 \code {anyDuplicated()}: an integer or real vector of length one with ! Undefined control sequence. l.10450 \code {0}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10451 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10453 \begin{Section} {Warning} ! Undefined control sequence. l.10455 are not atomic vectors (see \code {\LinkA{vector}{vector}}) or differ... ! Undefined control sequence. l.10455 are not atomic vectors (see \code{\LinkA {vector}{vector}}) or differ... ! Undefined control sequence. l.10456 ...tributes. In the worst case it is \eqn {O(n^2)}{}. ! Missing $ inserted. $ l.10456 ...tes. In the worst case it is \eqn{O(n^ 2)}{}. ! Extra }, or forgotten $. l.10456 .... In the worst case it is \eqn{O(n^2)} {}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10457 \end{Section} ! Missing $ inserted. $ l.10457 \end{Section} ! Missing } inserted. } l.10457 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10459 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10463 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10465 \begin{SeeAlso} \relax ! Undefined control sequence. l.10466 \code {\LinkA{unique}{unique}}. ! Undefined control sequence. l.10466 \code{\LinkA {unique}{unique}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10467 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10469 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10470 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10472 # # extract unique elements ! You can't use `macro parameter character #' in horizontal mode. l.10472 ## extract unique elements ! You can't use `macro parameter character #' in horizontal mode. l.10474 # # similar, same elements but different order: ! You can't use `macro parameter character #' in horizontal mode. l.10474 ## similar, same elements but different order: ! You can't use `macro parameter character #' in vertical mode. l.10477 # # xu == unique(x) but unique(x) is more efficient ! You can't use `macro parameter character #' in vertical mode. l.10477 ## xu == unique(x) but unique(x) is more efficient ! You can't use `macro parameter character #' in horizontal mode. l.10484 anyDuplicated(iris) # # 143 ! You can't use `macro parameter character #' in horizontal mode. l.10484 anyDuplicated(iris) ## 143 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10488 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10489 \end{Examples} ! Undefined control sequence. l.10490 \HeaderA {dyn.load}{Foreign Function Interface}{dyn.load} ! Undefined control sequence. l.10491 \aliasA {dyn.unload}{dyn.load}{dyn.unload} ! Undefined control sequence. l.10492 \aliasA {is.loaded}{dyn.load}{is.loaded} ! Undefined control sequence. l.10493 \keyword {interface}{dyn.load} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10495 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10498 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [70] l.10500 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 10486--10501 []\OT1/cmr/m/n/10 anyDuplicated(x) anyDu-pli-cated(x, from-Last = TRUE) Underfull \hbox (badness 3482) in paragraph at lines 10486--10501 \OT1/cmr/m/n/10 dyn.loadForeign Func-tion In-ter-face-dyn.load dyn.unloaddyn.lo addyn.unload ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10507 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10509 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10510 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10511 \item[\code{x}] a character string giving the pathname to a DLL, als... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10514 \item[\code{local}] a logical value controlling whether the symbols ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10519 \item[\code{now}] a logical controlling whether all symbols are reso... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10525 \item[\code{...}] other arguments for future expansion. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10527 \item[\code{symbol}] a character string giving a symbol name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10528 \item[\code{PACKAGE}] if supplied, confine the search for the \code{... ! Undefined control sequence. l.10528 ...plied, confine the search for the \code {name} to ! Undefined control sequence. l.10530 \file {.so}, \file{.sl}, \file{.dll}, \dots). This is intended to ! Undefined control sequence. l.10530 \file{.so}, \file {.sl}, \file{.dll}, \dots). This is intended to ! Undefined control sequence. l.10530 \file{.so}, \file{.sl}, \file {.dll}, \dots). This is intended to ! Undefined control sequence. l.10533 used in the same way as in \code ] {\LinkA{.C}{.C}}, \code{\LinkA{.Call... ! Undefined control sequence. l.10533 used in the same way as in \code{\LinkA {.C}{.C}}, \code{\LinkA{.Call... ! Undefined control sequence. l.10533 ... way as in \code{\LinkA{.C}{.C}}, \code {\LinkA{.Call}{.Call}}, ! Undefined control sequence. l.10533 ... in \code{\LinkA{.C}{.C}}, \code{\LinkA {.Call}{.Call}}, ! Undefined control sequence. l.10534 \code {\LinkA{.Fortran}{.Fortran}} and \code{\LinkA{.External}{.Exter... ! Undefined control sequence. l.10534 \code{\LinkA {.Fortran}{.Fortran}} and \code{\LinkA{.External}{.Exter... ! Undefined control sequence. l.10534 ...e{\LinkA{.Fortran}{.Fortran}} and \code {\LinkA{.External}{.Extern... ! Undefined control sequence. l.10534 ...A{.Fortran}{.Fortran}} and \code{\LinkA {.External}{.External}} fu... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10535 \item[\code{type}] The type of symbol to look for: can be any (\code... ! Undefined control sequence. l.10535 ...f symbol to look for: can be any (\code {""}, the ! Undefined control sequence. l.10536 default), \code {"Fortran"}, \code{"Call"} or \code{"External"}. ! Undefined control sequence. l.10536 default), \code{"Fortran"}, \code {"Call"} or \code{"External"}. ! Undefined control sequence. l.10536 ...code{"Fortran"}, \code{"Call"} or \code {"External"}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10537 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10538 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10540 \begin{Details} \relax [104] [56 ! Undefined control sequence. l.10542 The objects \code {dyn.load} loads are called `dynamically ! Undefined control sequence. l.10555 the \code {PACKAGE} argument correctly, and may incorrectly find ! Undefined control sequence. l.10556 symbols linked into \R {}. ! Undefined control sequence. l.10558 The additional arguments to \code {dyn.load} mirror the different ! Undefined control sequence. l.10559 aspects of the mode argument to the \code {dlopen()} routine on POSIX ! Undefined control sequence. l.10565 The \code {local} argument allows one to control whether the symbols in ! Undefined control sequence. l.10574 loading via the \code {now} argument as \code{FALSE}. If a routine is ! Undefined control sequence. l.10574 ...ng via the \code{now} argument as \code {FALSE}. If a routine is ! Undefined control sequence. l.10577 value \code {TRUE} to check that all symbols are actually resolved and ! Undefined control sequence. l.10578 for regular users to call with \code {FALSE} so that missing symbols ! Undefined control sequence. l.10582 in the \code {\_init()} routines of the Java virtual machine library. ! Undefined control sequence. l.10592 options \code {verbose} or \code{warn} to be non-zero via the ! Undefined control sequence. l.10592 options \code{verbose} or \code {warn} to be non-zero via the ! Undefined control sequence. l.10593 \code {\LinkA{options}{options}} function. ! Undefined control sequence. l.10593 \code{\LinkA {options}{options}} function. ! Undefined control sequence. l.10597 \url {http://www.stat.ucdavis.edu/~duncan/R/dynload/}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10598 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10600 \begin{Value} ! Undefined control sequence. l.10601 The function \code {dyn.load} is used for its side effect which links ! Undefined control sequence. l.10602 the specified DLL to the executing \R {} image. Calls to \code{.C}, ! Undefined control sequence. l.10602 ...e executing \R{} image. Calls to \code {.C}, ! Undefined control sequence. l.10603 \code {.Call}, \code{.Fortran} and \code{.External} can then be used to ! Undefined control sequence. l.10603 \code{.Call}, \code {.Fortran} and \code{.External} can then be used to ! Undefined control sequence. l.10603 \code{.Call}, \code{.Fortran} and \code {.External} can then be used to ! Undefined control sequence. l.10605 library. The return value of \code {dyn.load} is an object of class ! Undefined control sequence. l.10606 \code {DLLInfo}. See \code{\LinkA{getLoadedDLLs}{getLoadedDLLs}} for... ! Undefined control sequence. l.10606 \code{DLLInfo}. See \code {\LinkA{getLoadedDLLs}{getLoadedDLLs}} for... ! Undefined control sequence. l.10606 \code{DLLInfo}. See \code{\LinkA {getLoadedDLLs}{getLoadedDLLs}} for... ! Undefined control sequence. l.10609 The function \code ] Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71 {dyn.unload} unlinks the DLL. Note that unloading a ! Undefined control sequence. l.10613 \code {is.loaded} checks if the symbol name is loaded \emph{and ! Undefined control sequence. l.10615 for argument \code {.NAME} in \code{.C} or \code{.Fortran} or ! Undefined control sequence. l.10615 for argument \code{.NAME} in \code {.C} or \code{.Fortran} or ! Undefined control sequence. l.10615 ...ment \code{.NAME} in \code{.C} or \code {.Fortran} or ! Undefined control sequence. l.10616 \code {.Call} or \code{.External}. It will succeed if any one of the ! Undefined control sequence. l.10616 \code{.Call} or \code {.External}. It will succeed if any one of the ! Undefined control sequence. l.10618 \code {type} is specified. (See \code{\LinkA{.Fortran}{.Fortran}} fo... ! Undefined control sequence. l.10618 \code{type} is specified. (See \code {\LinkA{.Fortran}{.Fortran}} fo... ! Undefined control sequence. l.10618 ...{type} is specified. (See \code{\LinkA {.Fortran}{.Fortran}} for ... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10621 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10623 \begin{Section} {Warning} ! Undefined control sequence. l.10624 Do not use \code {dyn.unload} on a DLL loaded by ! Undefined control sequence. l.10625 \code {\LinkA{library.dynam}{library.dynam}}: use \code{\LinkA{librar... ! Undefined control sequence. l.10625 \code{\LinkA {library.dynam}{library.dynam}}: use \code{\LinkA{librar... ! Undefined control sequence. l.10625 ...brary.dynam}{library.dynam}}: use \code {\LinkA{library.dynam.unlo... ! Undefined control sequence. l.10625 ...ynam}{library.dynam}}: use \code{\LinkA {library.dynam.unload}{lib... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10627 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10629 \begin{Note} \relax ! Undefined control sequence. l.10630 \code {is.loaded} requires the name you would give to \code{.C} etc ! Undefined control sequence. l.10630 ...quires the name you would give to \code {.C} etc ! Undefined control sequence. l.10631 and \strong {not} (as in S) that remapped by the defunct functions ! Undefined control sequence. l.10632 \code {symbol.C} or \code{symbol.For}. ! Undefined control sequence. l.10632 \code{symbol.C} or \code {symbol.For}. [105] [57] ! Undefined control sequence. l.10635 ...icient in almost all cases. As from \R {} 3.4.0, the ! Undefined control sequence. l.10637 variable \env {R\_MAX\_NUM\_DLLS}, which has to be set before startin... ! Undefined control sequence. l.10638 \R {} session. On Unix, \env{R\_MAX\_NUM\_DLLS} is in addition not ! Undefined control sequence. l.10638 \R{} session. On Unix, \env {R\_MAX\_NUM\_DLLS} is in addition not ! Undefined control sequence. l.10641 modified using command \command {ulimit -n} (\command{sh}, ! Undefined control sequence. l.10641 ...g command \command{ulimit -n} (\command {sh}, ! Undefined control sequence. l.10642 \command {bash}) or \command{limit descriptors} (\command{csh}) in the ! Undefined control sequence. l.10642 \command{bash}) or \command {limit descriptors} (\command{csh}) in the ! Undefined control sequence. l.10642 ...r \command{limit descriptors} (\command {csh}) in the ! Undefined control sequence. l.10643 shell used to launch \R {} . Increasing \env{R\_MAX\_NUM\_DLLS} comes ! Undefined control sequence. l.10643 ... used to launch \R{} . Increasing \env {R\_MAX\_NUM\_DLLS} comes ! Undefined control sequence. l.10649 \code {dlopen} has become the POSIX standard for doing this. Under ! Undefined control sequence. l.10650 Unix-alikes \code {dyn.load} uses the \code{dlopen} mechanism and ! Undefined control sequence. l.10650 Unix-alikes \code{dyn.load} uses the \code {dlopen} mechanism and ! Undefined control sequence. l.10652 standard mechanism (\code {LoadLibrary}) for loading DLLs. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10656 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10658 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10662 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10664 \begin{SeeAlso} \relax ! Undefined control sequence. l.10665 \code {\LinkA{library.dynam}{library.dynam}} to be used inside a pack... ! Undefined control sequence. l.10665 \code{\LinkA {library.dynam}{library.dynam}} to be used inside a pack... ! Undefined control sequence. l.10666 \code {\LinkA{.onLoad}{.onLoad}} initialization. ! Undefined control sequence. l.10666 \code{\LinkA {.onLoad}{.onLoad}} initialization. ! Undefined control sequence. l.10668 \code {\LinkA{SHLIB}{SHLIB}} for how to create suitable DLLs. ! Undefined control sequence. l.10668 \code{\LinkA {SHLIB}{SHLIB}} for how to create suitable DLLs. ! Undefined control sequence. l.10670 \code {\LinkA{.C}{.C}}, ! Undefined control sequence. l.10670 \code{\LinkA ] {.C}{.C}}, ! Undefined control sequence. l.10671 \code {\LinkA{.Fortran}{.Fortran}}, ! Undefined control sequence. l.10671 \code{\LinkA {.Fortran}{.Fortran}}, ! Undefined control sequence. l.10672 \code {\LinkA{.External}{.External}}, ! Undefined control sequence. l.10672 \code{\LinkA {.External}{.External}}, ! Undefined control sequence. l.10673 \code {\LinkA{.Call}{.Call}}. ! Undefined control sequence. l.10673 \code{\LinkA {.Call}{.Call}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10674 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10676 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10677 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10678 # # expect all of these to be false in R >= 3.0.0. ! You can't use `macro parameter character #' in horizontal mode. l.10678 ## expect all of these to be false in R >= 3.0.0. ! You can't use `macro parameter character #' in horizontal mode. l.10679 is.loaded("supsmu") # Fortran entry point in stats ! You can't use `macro parameter character #' in horizontal mode. l.10681 is.loaded("PDF", type = "External") # pdf() device in grDevices ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10682 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10683 \end{Examples} ! Undefined control sequence. l.10684 \HeaderA {eapply}{Apply a Function Over Values in an Environment}{eap... ! Undefined control sequence. l.10685 \keyword {iteration}{eapply} ! Undefined control sequence. l.10686 \keyword {environment}{eapply} ! Undefined control sequence. l.10687 \keyword {list}{eapply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10689 \begin{Description} \relax ! Undefined control sequence. l.10690 \code {eapply} applies \code{FUN} to the named values from an ! Undefined control sequence. l.10690 \code{eapply} applies \code {FUN} to the named values from an ! Undefined control sequence. l.10691 \code {\LinkA{environment}{environment}} and returns the results as a... ! Undefined control sequence. l.10691 \code{\LinkA {environment}{environment}} and returns the results as a... ! Undefined control sequence. l.10696 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10697 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10699 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10703 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10705 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10706 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10707 \item[\code{env}] environment to be used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10708 \item[\code{FUN}] the function to be applied, found \emph{via} ! Undefined control sequence. l.10709 \code {\LinkA{match.fun}{match.fun}}. ! Undefined control sequence. l.10709 \code{\LinkA {match.fun}{match.fun}}. ! Undefined control sequence. l.10710 In the case of functions like \code {+}, \code{\%*\%}, etc., the ! Undefined control sequence. l.10710 ... case of functions like \code{+}, \code {\%*\%}, etc., the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10712 \item[\code{...}] optional arguments to \code{FUN}. ! Undefined control sequence. l.10712 ...\code{...}] optional arguments to \code {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10713 \item[\code{all.names}] a logical indicating whether to apply the fu... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10715 \item[\code{USE.NAMES}] logical indicating whether the resulting lis... ! Undefined control sequence. l.10716 have \code {\LinkA{names}{names}}. ! Undefined control sequence. l.10716 have \code{\LinkA {names}{names}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for [72 [58explanation. Type H for immediate help. ... l.10717 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10718 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10720 \begin{Value} ! Undefined control sequence. l.10721 A named (unless \code {USE.NAMES = FALSE}) list. Note that the order of ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10723 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10725 \begin{SeeAlso} \relax ! Undefined control sequence. l.10726 \code {\LinkA{environment}{environment}}, \code{\LinkA{lapply}{lapply}}. ! Undefined control sequence. l.10726 \code{\LinkA {environment}{environment}}, \code{\LinkA{lapply}{lapply}}. ! Undefined control sequence. l.10726 ...LinkA{environment}{environment}}, \code {\LinkA{lapply}{lapply}}. ! Undefined control sequence. l.10726 ...nvironment}{environment}}, \code{\LinkA {lapply}{lapply}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10727 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10729 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10730 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10733 env <- new.env(hash = FALSE) # so the order is fixed ! You can't use `macro parameter character #' in math mode. l.10737 # what have we there? ! Missing $ inserted. $ l.10739 Underfull \hbox (badness 10000) in paragraph at lines 10733--10739 []\OT1/cmr/m/n/10 env <- new.env(hash = FALSE) so the or-der is Underfull \hbox (badness 10000) in paragraph at lines 10733--10739 \OT1/cmr/m/n/10 fixed env$\OML/cmm/m/it/10 a < \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n /10 1 : 10\OML/cmm/m/it/10 env$\OT1/cmr/m/n/10 beta <- exp(-3:3) env$\OML/cmm/m /it/10 logic < [106]]] ! You can't use `macro parameter character #' in vertical mode. l.10740 # compute the mean for each list element ! You can't use `macro parameter character #' in vertical mode. l.10744 # median and quartiles for each element (making use of "..." passing): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10747 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10748 \end{Examples} ! Undefined control sequence. l.10749 \HeaderA {eigen}{Spectral Decomposition of a Matrix}{eigen} ! Undefined control sequence. l.10750 \aliasA {print.eigen}{eigen}{print.eigen} ! Undefined control sequence. l.10751 \keyword {algebra}{eigen} ! Undefined control sequence. l.10752 \keyword {array}{eigen} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10754 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10757 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10759 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10763 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10765 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10766 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10767 \item[\code{x}] a numeric or complex matrix whose spectral decomposi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10769 \item[\code{symmetric}] if \code{TRUE}, the matrix is assumed to be ... ! Undefined control sequence. l.10769 \item[\code{symmetric}] if \code {TRUE}, the matrix is assumed to be ... ! Undefined control sequence. l.10771 included) is used. If \code {symmetric} is not specified, ! Undefined control sequence. l.10772 \code {\LinkA{isSymmetric}{isSymmetric}(x)} is used. ! Undefined control sequence. l.10772 \code{\LinkA {isSymmetric}{isSymmetric}(x)} is used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10773 \item[\code{only.values}] if \code{TRUE}, only the eigenvalues are c... ! Undefined control sequence. l.10773 \item[\code{only.values}] if \code {TRUE}, only the eigenvalues are c... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10776 \item[\code{EISPACK}] logical. Defunct and ignored. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10777 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10778 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10780 \begin{Details} \relax ! Undefined control sequence. l.10781 If \code {symmetric} is unspecified, \code{\LinkA{isSymmetric}{isSymm... ! Undefined control sequence. l.10781 If \code{symmetric} is unspecified, \code {\LinkA{isSymmetric}{isSymm... ! Undefined control sequence. l.10781 ...symmetric} is unspecified, \code{\LinkA {isSymmetric}{isSymmetric}... ! Undefined control sequence. l.10791 \code {x}. So even though a real asymmetric \code{x} may have an ! Undefined control sequence. l.10791 ... So even though a real asymmetric \code {x} may have an ! Undefined control sequence. l.10797 ...a positive error code (most often \code {1}): these can ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10799 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10801 \begin{Value} ! Undefined control sequence. l.10802 The spectral decomposition of \code {x} is returned as a list with co... ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10804 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. . [59.. l.10805 \item[\code{values}] a vector containing the \eqn{p}{} eigenvalues o... ! Undefined control sequence. l.10805 ...e{values}] a vector containing the \eqn {p}{} eigenvalues of \code... ! Undefined control sequence. l.10805 ...ning the \eqn{p}{} eigenvalues of \code {x}, ! Undefined control sequence. l.10806 ...h{decreasing} order, according to \code {Mod(values)} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10811 \item[\code{vectors}] either a \eqn{p\times p}{} matrix whose columns ! Undefined control sequence. l.10811 \item[\code{vectors}] either a \eqn {p\times p}{} matrix whose columns ! Missing $ inserted. $ l.10811 ...m[\code{vectors}] either a \eqn{p\times p}{} matrix whose columns ! Extra }, or forgotten $. l.10811 ...code{vectors}] either a \eqn{p\times p} {} matrix whose columns ! Undefined control sequence. l.10812 contain the eigenvectors of \code {x}, or \code{NULL} if ! Undefined control sequence. l.10812 ... the eigenvectors of \code{x}, or \code {NULL} if ! Undefined control sequence. l.10813 \code {only.values} is \code{TRUE}. The vectors are normalized to ! Undefined control sequence. l.10813 \code{only.values} is \code {TRUE}. The vectors are normalized to ! Missing $ inserted. $ l.10815 Overfull \hbox (245.29468pt too wide) in paragraph at lines 10811--10815 []\OT1/cmr/m/n/10 either a p$\OMS/cmsy/m/n/10 ^^B\OML/cmm/m/it/10 p[]matrixwhos ecolumnscontaintheeigenvectorsofx; or[]if[]is[]:Thevectorsarenormalizedtounitle ngth:$ ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10821 \end{ldescription} ! Missing } inserted. } l.10821 \end{ldescription} ! Undefined control sequence. l.10822 When \code {only.values} is not true, as by default, the result is of ! Undefined control sequence. l.10823 S3 class \code {"eigen"}. ! Undefined control sequence. l.10825 If \code {r <- eigen(A)}, and \code{V <- r\$vectors; lam <- r\$values}, ! Undefined control sequence. l.10825 If \code{r <- eigen(A)}, and \code {V <- r\$vectors; lam <- r\$values}, ! Undefined control sequence. l.10826 then \deqn {A = V \Lambda V^{-1}}{} (up to numerical ! Missing $ inserted. $ l.10826 then \deqn{A = V \Lambda V^{-1}}{} (up to numerical ! Extra }, or forgotten $. l.10826 then \deqn{A = V \Lambda V^{-1}} {} (up to numerical ! Undefined control sequence. l.10827 fuzz), where \eqn {\Lambda =}{}\code{diag(lam)}. ! Undefined control sequence. l.10827 fuzz), where \eqn{\Lambda =}{}\code {diag(lam)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10828 \end{Value} ! Missing $ inserted. $ l.10828 \end{Value} ! Missing } inserted. } l.10828 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10830 \begin{Source} \relax ! Undefined control sequence. l.10831 \code {eigen} uses the LAPACK routines \code{DSYEVR}, \code{DGEEV}, ! Undefined control sequence. l.10831 ...e{eigen} uses the LAPACK routines \code {DSYEVR}, \code{DGEEV}, ! Undefined control sequence. l.10831 ...he LAPACK routines \code{DSYEVR}, \code {DGEEV}, ! Undefined control sequence. l.10832 \code {ZHEEV} and \code{ZGEEV}. ! Undefined control sequence. l.10832 \code{ZHEEV} and \code {ZGEEV}. ! Undefined control sequence. l.10834 LAPACK is from \url {http://www.netlib.org/lapack} and its guide is l... ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10836 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10838 \begin{References} \relax ! Undefined control sequence. l.10842 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.10842 ...ttp://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.10842 ....netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.10843 [107] [73]] [60 ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10850 \end{References} ! Missing } inserted. } l.10850 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10852 \begin{SeeAlso} \relax ! Undefined control sequence. l.10853 \code {\LinkA{svd}{svd}}, a generalization of \code{eigen}; \code{\Li... ! Undefined control sequence. l.10853 \code{\LinkA {svd}{svd}}, a generalization of \code{eigen}; \code{\Li... ! Undefined control sequence. l.10853 ...A{svd}{svd}}, a generalization of \code {eigen}; \code{\LinkA{qr}{... ! Undefined control sequence. l.10853 ...a generalization of \code{eigen}; \code {\LinkA{qr}{qr}}, and ! Undefined control sequence. l.10853 ...alization of \code{eigen}; \code{\LinkA {qr}{qr}}, and ! Undefined control sequence. l.10854 \code {\LinkA{chol}{chol}} for related decompositions. ! Undefined control sequence. l.10854 \code{\LinkA {chol}{chol}} for related decompositions. ! Undefined control sequence. l.10856 ... the determinant of a matrix, the \code {\LinkA{qr}{qr}} ! Undefined control sequence. l.10856 ...terminant of a matrix, the \code{\LinkA {qr}{qr}} ! Undefined control sequence. l.10857 ...mposition is much more efficient: \code {\LinkA{det}{det}}. ! Undefined control sequence. l.10857 ...on is much more efficient: \code{\LinkA {det}{det}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10858 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10860 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10861 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.10864 # same (different algorithm). ! You can't use `macro parameter character #' in horizontal mode. l.10867 eigen(cbind(-1, 2:1)) # complex values ! You can't use `macro parameter character #' in horizontal mode. l.10868 eigen(print(cbind(c(0, 1i), c(-1i, 0)))) # Hermite ==> real Eigenvalues ! You can't use `macro parameter character #' in horizontal mode. l.10869 # # 3 x 3: ! You can't use `macro parameter character #' in horizontal mode. l.10869 ## 3 x 3: ! You can't use `macro parameter character #' in horizontal mode. l.10871 eigen(cbind(-1, c(1:2,0), 0:2)) # complex values ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediat]e help. ... l.10873 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10874 \end{Examples} ! Undefined control sequence. l.10875 \HeaderA {encodeString}{Encode Character Vector as for Printing}{enco... ! Undefined control sequence. l.10876 \keyword {utilities}{encodeString} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10878 \begin{Description} \relax ! Undefined control sequence. l.10879 \code {encodeString} escapes the strings in a character vector in the ! Undefined control sequence. l.10880 same way \code {print.default} does, and optionally fits the encoded ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10882 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10884 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10889 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10891 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10892 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10893 \item[\code{x}] A character vector, or an object that can be coerced... ! Undefined control sequence. l.10894 by \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.10894 by \code{\LinkA {as.character}{as.character}}. Underfull \hbox (badness 4144) in paragraph at lines 10893--10895 []\OT1/cmr/m/n/10 A char-ac-ter vec-tor, or an ob-ject that can be co-erced to one by ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10895 \item[\code{width}] integer: the minimum field width. If \code{NULL... ! Undefined control sequence. l.10895 ...ger: the minimum field width. If \code {NULL} or ! Undefined control sequence. l.10896 \code {NA}, this is taken to be the largest field width needed for ! Undefined control sequence. l.10897 any element of \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10898 \item[\code{quote}] character: quoting character, if any. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10899 \item[\code{na.encode}] logical: should \code{NA} strings be encoded? ! Undefined control sequence. l.10899 ...\code{na.encode}] logical: should \code {NA} strings be encoded? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10900 \item[\code{justify}] character: partial matches are allowed. If pa... ! Undefined control sequence. l.10902 \code {justify == "none"} is equivalent to \code{width = 0}, for ! Undefined control sequence. l.10902 ...stify == "none"} is equivalent to \code {width = 0}, for ! Undefined control sequence. l.10903 consistency with \code {format.default}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10904 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10905 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10907 \begin{Details} \relax ! Undefined control sequence. l.10908 ...kslash and the control characters \samp {\bsl{}a} (bell), ! Undefined control sequence. l.10908 ...h and the control characters \samp{\bsl {}a} (bell), ! Undefined control sequence. l.10909 \samp {\bsl{}b} (backspace), \samp{\bsl{}f} (formfeed), \samp{\bsl{}n... ! Undefined control sequence. l.10909 \samp{\bsl {}b} (backspace), \samp{\bsl{}f} (formfeed), \samp{\bsl{}n... ! Undefined control sequence. l.10909 \samp{\bsl{}b} (backspace), \samp {\bsl{}f} (formfeed), \samp{\bsl{}n... ! Undefined control sequence. l.10909 \samp{\bsl{}b} (backspace), \samp{\bsl {}f} (formfeed), \samp{\bsl{}n... ! Undefined control sequence. l.10909 ...pace), \samp{\bsl{}f} (formfeed), \samp {\bsl{}n} (line feed), ! Undefined control sequence. l.10909 ..., \samp{\bsl{}f} (formfeed), \samp{\bsl {}n} (line feed), ! Undefined control sequence. l.10910 \samp {\bsl{}r} (carriage return), \samp{\bsl{}t} (tab) and \samp{\bs... ! Undefined control sequence. l.10910 \samp{\bsl {}r} (carriage return), \samp{\bsl{}t} (tab) and \samp{\bs... ! Undefined control sequence. l.10910 \samp{\bsl{}r} (carriage return), \samp {\bsl{}t} (tab) and \samp{\bs... ! Undefined control sequence. l.10910 ...{\bsl{}r} (carriage return), \samp{\bsl {}t} (tab) and \samp{\bsl{}v} ! Undefined control sequence. l.10910 ...return), \samp{\bsl{}t} (tab) and \samp {\bsl{}v} ! Undefined control sequence. l.10910 ...n), \samp{\bsl{}t} (tab) and \samp{\bsl {}v} ! Undefined control sequence. l.10912 ...ch are printed in octal notation (\samp {\bsl{}xyz} ! Undefined control sequence. l.10912 ...e printed in octal notation (\samp{\bsl {}xyz} ! Undefined control sequence. l.10919 See \code {\LinkA{print.default}{print.default}} for how non-printabl... ! Undefined control sequence. l.10919 See \code{\LinkA {print.default}{print.default}} for how non-printabl... ! Undefined control sequence. l.10922 If \code {quote} is a single or double quote any embedded quote of the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10925 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10927 \begin{Value} ! Undefined control sequence. l.10928 ...cter vector of the same length as \code {x}, with the same ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10932 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10934 \begin{Note} \relax ! Undefined control sequence. l.10935 The default for \code {width} is different from \code{format.default}, ! Undefined control sequence. l.10935 ...or \code{width} is different from \code {format.default}, ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10938 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10940 \begin{SeeAlso} \relax ! Undefined control sequence. l.10941 \code {\LinkA{print.default}{print.default}} ! Undefined control sequence. l.10941 \code{\LinkA {print.default}{print.default}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10942 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10944 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10945 \begin{ExampleCode} ! Undefined control sequence. l.10946 x <- "ab\bc \ndef" ! Undefined control sequence. l.10946 x <- "ab\bc\ndef " ! You can't use `macro parameter character #' in horizontal mode. l.10948 cat(x) # interprets escapes ! Undefined control sequence. l.10949 cat(encodeString(x), "\n ", sep = "") # similar to print() ! You can't use `macro parameter character #' in horizontal mode. l.10949 cat(encodeString(x), "\n", sep = "") # similar to print() ! You can't use `macro parameter character #' in horizontal mode. l.10951 factor(x) # makes use of this to print the levels ! You can't use `macro parameter character #' in horizontal mode. l.10954 encodeString(x) # width = 0: use as little as possible ! You can't use `macro parameter character #' in horizontal mode. l.10955 encodeString(x, 2) # use two or more (left justified) ! You can't use `macro parameter character #' in horizontal mode. l.10956 encodeString(x, width = NA) # left justification ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10960 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10961 \end{Examples} ! Undefined control sequence. l.10962 \HeaderA {Encoding}{Read or Set the Declared Encodings for a Characte... ! Undefined control sequence. l.10963 \aliasA {enc2native}{Encoding}{enc2native} ! Undefined control sequence. l.10964 \aliasA {enc2utf8}{Encoding}{enc2utf8} ! Undefined control sequence. l.10965 \aliasA {Encoding<\Rdash{}}{Encoding}{Encoding<.Rdash.} ! Undefined control sequence. l.10965 \aliasA{Encoding<\Rdash {}}{Encoding}{Encoding<.Rdash.} ! Undefined control sequence. l.10966 \keyword {utilities}{Encoding} ! Undefined control sequence. l.10967 \keyword {character}{Encoding} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10969 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10971 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10973 \begin{Usage} [108 [74] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10982 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10984 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10985 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10986 \item[\code{x}] A character vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10987 \item[\code{value}] A character vector of positive length. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10988 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10989 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10991 \begin{Details} \relax ! Undefined control sequence. l.10992 Character strings in \R {} can be declared to be encoded in ! Undefined control sequence. l.10993 \code {"latin1"} or \code{"UTF-8"} or as \code{"bytes"}. These ! Undefined control sequence. l.10993 \code{"latin1"} or \code {"UTF-8"} or as \code{"bytes"}. These ! Undefined control sequence. l.10993 ..."latin1"} or \code{"UTF-8"} or as \code {"bytes"}. These ! Undefined control sequence. l.10994 declarations can be read by \code {Encoding}, which will return a ! Undefined control sequence. l.10995 character vector of values \code {"latin1"}, \code{"UTF-8"} ! Undefined control sequence. l.10995 ...vector of values \code{"latin1"}, \code {"UTF-8"} ! Undefined control sequence. l.10996 \code {"bytes"} or \code{"unknown"}, or set, when \code{value} is ! Undefined control sequence. l.10996 \code{"bytes"} or \code {"unknown"}, or set, when \code{value} is ! Undefined control sequence. l.10996 ...or \code{"unknown"}, or set, when \code {value} is ! Undefined control sequence. l.10998 \code {"unknown"}. ASCII strings will never be marked with a declared ! Undefined control sequence. l.11000 encodings. Strings marked as \code {"]bytes"} are intended to be ! Undefined control sequence. l.11005 \code {enc2native} and \code{enc2utf8} convert elements of character ! Undefined control sequence. l.11005 \code{enc2native} and \code {enc2utf8} convert elements of character ! Undefined control sequence. l.11007 ...encoding into account. They are \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.11012 \R {} has evolved). Functions \code{\LinkA{scan}{scan}}, ! Undefined control sequence. l.11012 \R{} has evolved). Functions \code {\LinkA{scan}{scan}}, ! Undefined control sequence. l.11012 \R{} has evolved). Functions \code{\LinkA {scan}{scan}}, ! Undefined control sequence. l.11013 \code {\LinkA{read.table}{read.table}}, \code{\LinkA{readLines}{readL... ! Undefined control sequence. l.11013 \code{\LinkA {read.table}{read.table}}, \code{\LinkA{readLines}{readL... ! Undefined control sequence. l.11013 ...{\LinkA{read.table}{read.table}}, \code {\LinkA{readLines}{readLin... ! Undefined control sequence. l.11013 ...{read.table}{read.table}}, \code{\LinkA {readLines}{readLines}}, and ! Undefined control sequence. l.11014 \code {\LinkA{parse}{parse}} have an \code{encoding} argument that is... ! Undefined control sequence. l.11014 \code{\LinkA {parse}{parse}} have an \code{encoding} argument that is... ! Undefined control sequence. l.11014 \code{\LinkA{parse}{parse}} have an \code {encoding} argument that is... ! Undefined control sequence. l.11015 declare encodings, \code {\LinkA{iconv}{iconv}} declares encodings fr... ! Undefined control sequence. l.11015 declare encodings, \code{\LinkA {iconv}{iconv}} declares encodings fr... ! Undefined control sequence. l.11016 \code {to} argument, and console input in suitable locales is also ! Undefined control sequence. l.11017 declared. \code {\LinkA{intToUtf8}{intToUtf8}} declares its output as ! Undefined control sequence. l.11017 declared. \code{\LinkA {intToUtf8}{intToUtf8}} declares its output as ! Undefined control sequence. l.11018 \code {"UTF-8"}, and output text connections (see ! Undefined control sequence. l.11019 \code {\LinkA{textConnection}{textConnection}}) are marked if running... ! Undefined control sequence. l.11019 \code{\LinkA {textConnection}{textConnection}}) are marked if running... ! Undefined control sequence. l.11021 \code {\LinkA{source}{source}(encoding=)} will mark encodings of char... ! Undefined control sequence. l.11021 \code{\LinkA {source}{source}(encoding=)} will mark encodings of char... ! Undefined control sequence. l.11026 \code {\LinkA{chartr}{chartr}}, \code{\LinkA{strsplit}{strsplit}(useB... ! Undefined control sequence. l.11026 \code{\LinkA {chartr}{chartr}}, \code{\LinkA{strsplit}{strsplit}(useB... ! Undefined control sequence. l.11026 \code{\LinkA{chartr}{chartr}}, \code {\LinkA{strsplit}{strsplit}(useB... ! Undefined control sequence. l.11026 ...e{\LinkA{chartr}{chartr}}, \code{\LinkA {strsplit}{strsplit}(useBy... ! Undefined control sequence. l.11027 \code {\LinkA{tolower}{tolower}} and \code{\LinkA{toupper}{toupper}} ... ! Undefined control sequence. l.11027 \code{\LinkA {tolower}{tolower}} and \code{\LinkA{toupper}{toupper}} ... ! Undefined control sequence. l.11027 \code{\LinkA{tolower}{tolower}} and \code {\LinkA{toupper}{toupper}} ... ! Undefined control sequence. l.11027 ...nkA{tolower}{tolower}} and \code{\LinkA {toupper}{toupper}} as wel... ! Undefined control sequence. l.11028 \code {\LinkA{sub}{sub}(useBytes = FALSE)} and \code{\LinkA{gsub}{gsu... ! Undefined control sequence. l.11028 \code{\LinkA {sub}{sub}(useBytes = FALSE)} and \code{\LinkA{gsub}{gsu... ! Undefined control sequence. l.11028 ...{sub}{sub}(useBytes = FALSE)} and \code {\LinkA{gsub}{gsub}(useByt... ! Undefined control sequence. l.11028 ...ub}(useBytes = FALSE)} and \code{\LinkA {gsub}{gsub}(useBytes = ! Undefined control sequence. l.11034 \code {\LinkA{substr}{substr}} does preserve the encoding, and ! Undefined control sequence. l.11034 \code{\LinkA {substr}{substr}} does preserve the encoding, and ! Undefined control sequence. l.11035 \code {\LinkA{chartr}{chartr}}, \code{\LinkA{tolower}{tolower}} and \... ! Undefined control sequence. l.11035 \code{\LinkA {chartr}{chartr}}, \code{\LinkA{tolower}{tolower}} and \... ! Undefined control sequence. l.11035 \code{\LinkA{chartr}{chartr}}, \code {\LinkA{tolower}{tolower}} and \... ! Undefined control sequence. l.11035 ...e{\LinkA{chartr}{chartr}}, \code{\LinkA {tolower}{tolower}} and \c... ! Undefined control sequence. l.11035 ...ode{\LinkA{tolower}{tolower}} and \code {\LinkA{toupper}{toupper}} ! Undefined control sequence. l.11035 ...nkA{tolower}{tolower}} and \code{\LinkA {toupper}{toupper}} ! Undefined control sequence. l.11037 their \code {fixed} and \code{perl} options, \code{\LinkA{strsplit}{s... ! Undefined control sequence. l.11037 their \code{fixed} and \code {perl} options, \code{\LinkA{strsplit}{s... ! Undefined control sequence. l.11037 ...e{fixed} and \code{perl} options, \code {\LinkA{strsplit}{strsplit}}, ! Undefined control sequence. l.11037 ...} and \code{perl} options, \code{\LinkA {strsplit}{strsplit}}, ! Undefined control sequence. l.11038 \code {\LinkA{sub}{sub}} and \code{gsub} will give a marked UTF-8 res... ! Undefined control sequence. l.11038 \code{\LinkA {sub}{sub}} and \code{gsub} will give a marked UTF-8 res... ! Undefined control sequence. l.11038 \code{\LinkA{sub}{sub}} and \code {gsub} will give a marked UTF-8 res... ! Undefined control sequence. l.11041 \code {\LinkA{paste}{paste}} and \code{\LinkA{sprintf}{sprintf}} retu... ! Undefined control sequence. l.11041 \code{\LinkA {paste}{paste}} and \code{\LinkA{sprintf}{sprintf}} retu... ! Undefined control sequence. l.11041 \code{\LinkA{paste}{paste}} and \code {\LinkA{sprintf}{sprintf}} retu... ! Undefined control sequence. l.11041 ...{\LinkA{paste}{paste}} and \code{\LinkA {sprintf}{sprintf}} return... ! Undefined control sequence. l.11045 \code {\LinkA{match}{match}}, \code{\LinkA{pmatch}{pmatch}}, \code{\L... ! Undefined control sequence. l.11045 \code{\LinkA {match}{match}}, \code{\LinkA{pmatch}{pmatch}}, \code{\L... ! Undefined control sequence. l.11045 \code{\LinkA{match}{match}}, \code {\LinkA{pmatch}{pmatch}}, \code{\L... ! Undefined control sequence. l.11045 \code{\LinkA{match}{match}}, \code{\LinkA {pmatch}{pmatch}}, \code{\L... ! Undefined control sequence. l.11045 ...}, \code{\ [61LinkA{pmatch}{pmatch}}, \code {\LinkA{charmatch}{charmat... ! Undefined control sequence. l.11045 ...e{\LinkA{pmatch}{pmatch}}, \code{\LinkA {charmatch}{charmatch}}, ! Undefined control sequence. l.11046 \code {\LinkA{duplicated}{duplicated}} and \code{\LinkA{unique}{uniqu... ! Undefined control sequence. l.11046 \code{\LinkA {duplicated}{duplicated}} and \code{\LinkA{unique}{uniqu... ! Undefined control sequence. l.11046 ...inkA{duplicated}{duplicated}} and \code {\LinkA{unique}{unique}} a... ! Undefined control sequence. l.11046 ...plicated}{duplicated}} and \code{\LinkA {unique}{unique}} all matc... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11048 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11050 \begin{Value} [109]] Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75 Chapter 12 [62 ! Undefined control sequence. l.11053 For \code {enc2utf8} encodings are always marked: they are for ! Undefined control sequence. l.11054 \code {enc2native} in UTF-8 and Latin-1 locales. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11055 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11057 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11058 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.11059 # # x is intended to be in latin1 ! You can't use `macro parameter character #' in horizontal mode. l.11059 ## x is intended to be in latin1 ! Undefined control sequence. l.11060 x <- "fa\xE 7ile" ! You can't use `macro parameter character #' in horizontal mode. l.11068 xx # will be encoded in hex ! Undefined control sequence. l.11069 cat("xx = ", xx, "\n ", sep = "") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11070 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11071 \end{Examples} ! Undefined control sequence. l.11072 \HeaderA {environment}{Environment Access}{environment} ! Undefined control sequence. l.11073 \aliasA {.BaseNamespaceEnv}{environment}{.BaseNamespaceEnv} ! Undefined control sequence. l.11074 \aliasA {.GlobalEnv}{environment}{.GlobalEnv} ! Undefined control sequence. l.11075 \aliasA {baseenv}{environment}{baseenv} ! Undefined control sequence. l.11076 \aliasA {emptyenv}{environment}{emptyenv} ! Undefined control sequence. l.11077 \aliasA {enclosure}{environment}{enclosure} ! Undefined control sequence. l.11078 \aliasA {env.profile}{environment}{env.profile} ! Undefined control sequence. l.11079 \aliasA {environment<\Rdash{}}{environment}{environment<.Rdash.} ! Undefined control sequence. l.11079 \aliasA{environment<\Rdash {}}{environment}{environment<.Rdash.} ! Undefined control sequence. l.11080 \aliasA {environmentName}{environment}{environmentName} ! Undefined control sequence. l.11081 \aliasA {globalenv}{environment}{globalenv} ! Undefined control sequence. l.11082 \aliasA {is.environment}{environment}{is.environment} ! Undefined control sequence. l.11083 \aliasA {new.env}{environment}{new.env} ! Undefined control sequence. l.11084 \aliasA {parent.env}{environment}{parent.env} ! Undefined control sequence. l.11085 \aliasA {parent.env<\Rdash{}}{environment}{parent.env<.Rdash.} ! Undefined control sequence. l.11085 \aliasA{parent.env<\Rdash {}}{environment}{parent.env<.Rdash.} ! Undefined control sequence. l.11086 \keyword {data}{environment} ! Undefined control sequence. l.11087 \keywo]rd {programming}{environment} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11089 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11091 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11093 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 11053--11094 \OT1/cmr/m/n/10 .Base-Names-paceEn-ven-vi-ron-ment.BaseNamespaceEnv .Glob-alEn- ven-vi-ron- Underfull \hbox (badness 10000) in paragraph at lines 11053--11094 \OT1/cmr/m/n/10 ment.GlobalEnv baseen-ven-vi-ron-ment-baseenv emp-tyen-ven-vi-r on-mentemp- Underfull \hbox (badness 10000) in paragraph at lines 11053--11094 \OT1/cmr/m/n/10 tyenv en-clo-sureen-vi-ron-menten-clo-sure env.profileenvironme ntenv.profile Underfull \hbox (badness 10000) in paragraph at lines 11053--11094 \OT1/cmr/m/n/10 en-vi-ron-ment for immediate help. ... l.11116 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11118 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11119 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11120 \item[\code{fun}] a \code{\LinkA{function}{function}}, a \code{\Link... ! Undefined control sequence. l.11120 \item[\code{fun}] a \code {\LinkA{function}{function}}, a \code{\Link... ! Undefined control sequence. l.11120 \item[\code{fun}] a \code{\LinkA {function}{function}}, a \code{\Link... ! Undefined control sequence. l.11120 ...de{\LinkA{function}{function}}, a \code {\LinkA{formula}{formula}}... ! Undefined control sequence. l.11120 ...kA{function}{function}}, a \code{\LinkA {formula}{formula]}}, or ! Undefined control sequence. l.11121 \code {NULL}, which is the default. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11122 \item[\code{value}] an environment to associate with the function ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11123 \item[\code{x}] an arbitrary \R{} object. ! Undefined control sequence. l.11123 \item[\code{x}] an arbitrary \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11124 \item[\code{hash}] a logical, if \code{TRUE} the environment will us... ! Undefined control sequence. l.11124 \item[\code{hash}] a logical, if \code {TRUE} the environment will us... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11125 \item[\code{parent}] an environment to be used as the enclosure of the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11127 \item[\code{env}] an environment ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11128 \item[\code{size}] an integer specifying the initial size for a hashed ! Undefined control sequence. l.11130 \code {size} is \code{NA} or zero. This argument is ignored if ! Undefined control sequence. l.11130 \code{size} is \code {NA} or zero. This argument is ignored if ! Undefined control sequence. l.11131 \code {hash} is \code{FALSE}. ! Undefined control sequence. l.11131 \code{hash} is \code {FALSE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11132 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11133 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11135 \begin{Details} \relax ! Undefined control sequence. l.11142 \code {\LinkA{parent.frame}{parent.frame}}) refers to the environment... ! Undefined control sequence. l.11142 \code{\LinkA {parent.frame}{parent.frame}}) refers to the environment... ! Undefined control sequence. l.11145 presence of the function \code {parent.env}). [110] [63 ! Undefined control sequence. l.11147 When \code {\LinkA{get}{get}} or \code{\LinkA{exists}{exists}} search... ! Undefined control sequence. l.11147 When \code{\LinkA {get}{get}} or \code{\LinkA{exists}{exists}} search... ! Undefined control sequence. l.11147 When \code{\LinkA{get}{get}} or \code {\LinkA{exists}{exists}} search... ! Undefined control sequence. l.11147 ...\code{\LinkA{get}{get}} or \code{\LinkA {exists}{exists}} search a... ! Undefined control sequence. l.11148 with the default \code {inherits = TRUE}, they look for the variable ! Undefined control sequence. l.11151 The global environment \code {.GlobalEnv}, more often known as the ! Undefined control sequence. l.11153 be accessed by \code {globalenv()}. On the search path, each item's ! Undefined control sequence. l.11156 The object \code {.BaseNamespaceEnv} is the namespace environment for ! Undefined control sequence. l.11158 available as \code {baseenv()}. ! Undefined control sequence. l.11161 \code {parent.env} from any environment, eventually one reaches the ! Undefined control sequence. l.11162 empty environment \code {emptyenv()}, into which nothing may ! Undefined control sequence. l.11165 The replacement function \code {parent.env<-} is extremely dangerous as ! Undefined control sequence. l.11170 The replacement form of \code {environment}, \code{is.environment}, ! Undefined control sequence. l.11170 ...ement form of \code{environment}, \code {is.environment}, ! Undefined control sequence. l.11171 \code {baseenv}, \code{emptyenv} and \code{globalenv} are ! Undefined control sequence. l.11171 \code{baseenv}, \code {emptyenv} and \code{globalenv} are ! Undefined control sequence. l.11171 \code{baseenv}, \code{emptyenv} and \code {globalenv} are ! Undefined control sequence. l.11172 \LinkA {primitive}{primitive} functions. ! Undefined control sequence. l.11176 generated by \code {attach()}. Other environments can be named by ! Undefined control sequence. l.11177 giving a \code {"name"} attribute, but this needs to be done with care ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11179 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11181 \begin{Value} ! Undefined control sequence. l.11182 If \code {fun} is a function or a formula then \code{environment(fun)} ! Undefined control sequence. l.11182 ...} is a function or a formula then \code {environment(fun)} ! Undefined control sequence. l.11184 If \code {fun} is \code{NULL} then the current evaluation environment is ! Undefined control sequence. l.11184 If \code{fun} is \code {NULL} then the current evaluation environment is ! Undefined control sequence. l.11188 \code {fun} to the \code{value} given. ! Undefined control sequence. l.11188 \code{fun} to the \code {value} given. ! Undefined control sequence. l.11190 \code {is.environment(obj)} returns \code{TRUE} if and only if ! Undefined control sequence. l.11190 \code{is.environment(obj)} returns \code {TRUE} if and only if ! Undefined control sequence. l.11191 \code {obj} is an \code{environment}. ! Undefined control sequence. l.11191 \code{obj} is an \code {environment}. ! Undefined control sequence. l.11193 \code {new.env} returns a new (empty) environment with (by default) ! Undefined control sequence. l.11196 \code {parent.env} returns the enclosing environment of its argument. ! Undefined control sequence. l.11198 \code {parent.env<-} sets the enclosing environment of its first ! Undefined control sequence. l.11201 \code {environmentName} returns a character string, that given when ! Undefined control sequence. l.11202 the environment is printed or \code {""} if it is not a named environ... ! Undefined control sequence. l.11204 \code {env.profile} returns a list with the following components: ! Undefined control sequence. l.11205 \code {size} the number of chains that can be stored in the hash table, ! Undefined control sequence. l.11206 \code {nchains} the number of non-empty chains in the table (as ! Undefined control sequence. l.11207 reported by \code {HASHPRI}), and \code{counts} an integer vector ! Undefined control sequence. l.11207 reported by \code{HASHPRI}), and \code {counts} an integer vector ! Undefined control sequence. l.11210 When \code {env} is a non-hashed environment, \code{NULL} is returned. ! Undefined control sequence. l.11210 ...env} is a non-hashed environment, \code {NULL} is returned. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11211 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11213 \begin{SeeAlso} \relax ! Undefined control sequence. l.11215 \url {https://en.wikipedia.org/wiki/Hash_table}. ! Missing $ inserted. $ l.11215 \url{https://en.wikipedia.org/wiki/Hash_ table}. ! Extra }, or forgotten $. l.11215 ...tps://en.wikipedia.org/wiki/Hash_table} . ! Missing $ inserted. $ l.11216 ! Undefined control sequence. l.11217 The \code {envir} argument of \code{\LinkA{eval}{eval}}, \code{\LinkA... ! Undefined control sequence. l.11217 The \code{envir} argument of \code {\LinkA{eval}{eval}}, \code{\LinkA... ! Undefined control sequence. l.11217 The \code{envir} argument of \code{\LinkA {eval}{eval}}, \code{\LinkA... ! Undefined control sequence. l.11217 ...ent of \code{\LinkA{eval}{eval}}, \code {\LinkA{get}{get}}, ! Undefined control sequence. l.11217 ...\code{\LinkA{eval}{eval}}, \code{\LinkA {get}{get}}, ! Undefined control sequence. l.11218 and \code {\LinkA{exists}{exists}}. ! Undefined control sequence. l.11218 and \code{\LinkA {exists}{exists}}. ! Undefined control sequence. l.11220 \code {\LinkA{ls}{ls}} may be used to view the objects in an environm... ! Undefined control sequence. l.11220 \code{\LinkA {ls}{ls}} may be used to view ] [76the objects in an environm... ! Undefined control sequence. l.11221 and hence \code {\LinkA{ls.str}{ls.str}} may be useful for an overview. ! Undefined control sequence. l.11221 and hence \code{\LinkA {ls.str}{ls.str}} may be useful for an overview. ! Undefined control sequence. l.11223 \code {\LinkA{sys.source}{sys.source}} can be used to populate an env... ! Undefined control sequence. l.11223 \code{\LinkA {sys.source}{sys.source}} can be used to populate an env... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11224 \end{SeeAlso} ! Missing } inserted. } l.11224 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11226 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11227 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.11230 # #-- all three give the same: ! You can't use `macro parameter character #' in vertical mode. l.11230 ## -- all three give the same: [111]] ! You can't use `macro parameter character #' in horizontal mode. l.11237 is.environment(.GlobalEnv) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.11239 e1 <- new.env(parent = baseenv()) # this one has enclosure package:... ! You can't use `macro parameter character #' in horizontal mode. l.11244 exists("a", envir = e2) # this succeeds by inheritance ! You can't use `macro parameter character #' in horizontal mode. l.11246 exists("+", envir = e2) # this succeeds by inheritance ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11250 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11251 \end{Examples} ! Undefined control sequence. l.11252 \HeaderA {EnvVar}{Environment Variables}{EnvVar} ! Undefined control sequence. l.11253 \aliasA {DISPLAY}{EnvVar}{DISPLAY} ! Undefined control sequence. l.11254 \aliasA {EDITOR}{EnvVar}{EDITOR} ! Undefined control sequence. l.11255 \aliasA {environment variables}{EnvVar}{environment variables} ! Undefined control sequence. l.11256 \aliasA {HOME}{EnvVar}{HOME} ! Undefined control sequence. l.11257 \aliasA {LANGUAGE}{EnvVar}{LANGUAGE} ! Undefined control sequence. l.11258 \aliasA {MAKEINDEX}{EnvVar}{MAKEINDEX} ! Undefined control sequence. l.11259 \aliasA {PAGER}{EnvVar}{PAGER} ! Undefined control sequence. l.11260 \aliasA {R\_BATCH}{EnvVar}{R.Rul.BATCH} ! Undefined control sequence. l.11261 \aliasA {R\_BROWSER}{EnvVar}{R.Rul.BROWSER} ! Undefined control sequence. l.11262 \aliasA {R\_COMPLETION}{EnvVar}{R.Rul.COMPLETION} ! Undefined control sequence. l.11263 \aliasA {R\_DOC\_DIR}{EnvVar}{R.Rul.DOC.Rul.DIR} ! Undefined control sequence. l.11264 \aliasA {R\_GSCMD}{EnvVar}{R.Rul.GSCMD} ! Undefined control sequence. l.11265 \aliasA {R\_HISTFILE}{EnvVar}{R.Rul.HISTFILE} ! Undefined control sequence. l.11266 \aliasA {R\_HISTSIZE}{EnvVar}{R.Rul.HISTSIZE} ! Undefined control sequence. l.11267 \aliasA {R\_INCLUDE\_DIR}{EnvVar}{R.Rul.INCLUDE.Rul.DIR} ! Undefined control sequence. l.11268 \aliasA {R\_PAPERSIZE}{EnvVar}{R.Rul.PAPERSIZE} ! Undefined control sequence. l.11269 \aliasA {R\_PCRE\_JIT\_STACK\_MAXSIZE}{EnvVar}{R.Rul.PCRE.Rul.JIT.Rul... ! Undefined control sequence. l.11270 \aliasA {R\_PDFVIEWER}{EnvVar}{R.Rul.PDFVIEWER} ! Undefined control sequence. l.11271 \aliasA {R\_PLATFORM}{EnvVar}{R.Rul.PLATFORM} ! Undefined control sequence. l.11272 \aliasA {R\_PRINTCMD}{EnvVar}{R.Rul.PRINTCMD} ! Undefined control sequence. l.11273 \aliasA {R\_RD4PDF}{EnvVar}{R.Rul.RD4PDF} ! Undefined control sequence. l.11274 \aliasA {R\_SHARE\_DIR}{EnvVar}{R.Rul.SHARE.Rul.DIR} ! Undefined control sequence. l.11275 \aliasA {R\_TEXI2DVICMD}{EnvVar}{R.Rul.TEXI2DVICMD} ! Undefined control sequence. l.11276 \aliasA {R\_UNZIPCMD}{EnvVar}{R.Rul.UNZIPCMD} ! Undefined control sequence. l.11277 \aliasA {R\_ZIPCMD}{EnvVar}{R.Rul.ZIPCMD} ! Undefined control sequence. l.11278 \aliasA {TMPDIR}{EnvVar}{TMPDIR} ! Undefined control sequence. l.11279 \keyword {utilities}{EnvVar} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or La [64TeX Companion for explanation. Type H for immediate help. ... l.11281 \begin{Description} \relax ! Undefined control sequence. l.11282 ...nvironment variables which affect an \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11283 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11285 \begin{Details} \relax ! Undefined control sequence. l.11287 affect an \R {} session: some affect the OS system functions which \R{} ! Undefined control sequence. l.11287 ...affect the OS system functions which \R {} Underfull \hbox (badness 8189) in paragraph at lines 11248--11291 []\OT1/cmr/m/n/10 eh <- new.env(hash = TRUE, size = NA) with(env.profile(eh), Underfull \hbox (badness 3019) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 sEnvVaren-vi-ron-ment vari-ables HOME-EnvVarHOME LAN-GUAGEEnvVa r- Underfull \hbox (badness 10000) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 LAN-GUAGE MAKEIN-DEX-EnvVar-MAKEIN-DEX PAGEREnvVarPAGER Underfull \hbox (badness 10000) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]BATCHEnvVarR.Rul.BATCH R[]BROWSEREnvVarR.Rul.BROWSER Overfull \hbox (49.88297pt too wide) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]COMPLETIONEnvVarR.Rul.COMPLETION R[]DOC[]DIREnvVarR.Rul.DOC. Rul.DIR Underfull \hbox (badness 10000) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]GSCMDEnvVarR.Rul.GSCMD R[]HISTFILEEnvVarR.Rul.HISTFILE Overfull \hbox (49.32736pt too wide) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]HISTSIZEEnvVarR.Rul.HISTSIZE R[]INCLUDE[]DIREnvVarR.Rul.INCL UDE.Rul.DIR Overfull \hbox (239.02771pt too wide) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]PAPERSIZEEnvVarR.Rul.PAPERSIZE R[]PCRE[]JIT[]STACK[]MAXSIZEE nvVarR.Rul.PCRE.Rul.JIT.Rul.STACK.Rul.MAXSIZE Overfull \hbox (43.92186pt too wide) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]PDFVIEWEREnvVarR.Rul.PDFVIEWER R[]PLATFORMEnvVarR.Rul.PLATFO RM Overfull \hbox (79.04962pt too wide) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]SHARE[]DIREnvVarR.Rul.SHARE.Rul.DIR R[]TEXI2DVICMDEnvVarR.Ru l.TEXI2DVICMD Underfull \hbox (badness 1852) in paragraph at lines 11248--11291 \OT1/cmr/m/n/10 R[]UNZIPCMDEnvVarR.Rul.UNZIPCMD R[]ZIPCMDEnvVarR.Rul.ZIPCMD ! Undefined control sequence. \env {HOME}: l.11293 \item[\env{HOME}:] The user's `home' directory. ! Undefined control sequence. \env {LANGUAGE}: l.11294 \item[\env{LANGUAGE}:] Optional. The language(s) to be used for ! Undefined control sequence. \env {LC\_ALL}: l.11296 \item[\env{LC\_ALL}:] (etc) Optional. Use to set various aspects of ! Undefined control sequence. l.11297 the locale -- see \code {\LinkA{Sys.getlocale}{Sys.getlocale}}. Cons... ! Undefined control sequence. l.11297 the locale -- see \code{\LinkA {Sys.getlocale}{Sys.getlocale}}. Cons... ! Undefined control sequence. \env {MAKEINDEX}: l.11298 \item[\env{MAKEINDEX}:] The path to \command{makeindex}. ! Undefined control sequence. l.11298 ...[\env{MAKEINDEX}:] The path to \command {makeindex}. ! Undefined c]ontrol sequence. l.11299 If unset to a value determined when \R {} was built. ! Undefined control sequence. l.11300 Used by the emulation mode of \code {\LinkA{texi2dvi}{texi2dvi}} and ! Undefined control sequence. l.11300 Used by the emulation mode of \code{\LinkA {texi2dvi}{texi2dvi}} and ! Undefined control sequence. l.11301 \code {\LinkA{texi2pdf}{texi2pdf}}. ! Undefined control sequence. l.11301 \code{\LinkA {texi2pdf}{texi2pdf}}. ! Undefined control sequence. \env {R\_BATCH}: l.11302 \item[\env{R\_BATCH}:] Optional -- set in a batch session, that is ! Undefined control sequence. l.11303 one started by \command {R CMD \LinkA{BATCH}{BATCH}}. Most often set to ! Undefined control sequence. l.11303 one started by \command{R CMD \LinkA {BATCH}{BATCH}}. Most often set to ! Undefined control sequence. l.11304 \code {""}, so test by something like ! Undefined control sequence. l.11305 \code {!is.na(\LinkA{Sys.getenv}{Sys.getenv}("R\_BATCH", NA))}. ! Undefined control sequence. l.11305 \code{!is.na(\LinkA {Sys.getenv}{Sys.getenv}("R\_BATCH", NA))}. ! Undefined control sequence. \env {R\_BROWSER}: l.11306 \item[\env{R\_BROWSER}:] The path to the default browser. Used to ! Undefined control sequence. l.11307 set the default value of \code {\LinkA{options}{options}("browser")}. ! Undefined control sequence. l.11307 set the default value of \code{\LinkA {options}{options}("browser")}. ! Undefined control sequence. \env {R\_COMPLETION}: l.11308 \item[\env{R\_COMPLETION}:] Optional. If set to \code{FALSE}, ! Undefined control sequence. l.11308 ...OMPLETION}:] Optional. If set to \code {FALSE}, ! Undefined control sequence. \env {R\_DEFAULT\_PACKAGES}: l.11310 \item[\env{R\_DEFAULT\_PACKAGES}:] A comma-separated list of packages ! Undefined control sequence. l.11311 ...e attached in every session. See \code {\LinkA{options}{options}}. ! Undefined control sequence. l.11311 ...hed in every session. See \code{\LinkA {options}{options}}. ! Undefined control sequence. \env {R\_DOC\_DIR}: l.11312 \item[\env{R\_DOC\_DIR}:] The location of the \R{} \file{doc} ! Undefined control sequence. l.11312 ...v{R\_DOC\_DIR}:] The location of the \R {} \file{doc} ! Undefined control sequence. l.11312 ...\_DIR}:] The location of the \R{} \file {doc} ! Undefined control sequence. l.11313 directory. Set by \R {}. ! Undefined control sequence. \env {R\_ENVIRON}: l.11314 \item[\env{R\_ENVIRON}:] Optional. The path to the site environment ! Undefined control sequence. l.11315 file: see \LinkA {Startup}{Startup}. Consulted at startup. [112] Underfull \hbox (badness 10000) in paragraph at lines 6762--6768 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text @textrm part of [77 ! Undefined control sequence. \env {R\_GSCMD}: l.11316 \item[\env{R\_GSCMD}:] Optional. The path to Ghostscript, used by ! Undefined control sequence. l.11317 \code {\LinkA{dev2bitmap}{dev2bitmap}}, \code{\LinkA{bitmap}{bitmap}}... ! Undefined control sequence. l.11317 \code{\LinkA {dev2bitmap}{dev2bitmap}}, \code{\LinkA{bitmap}{bitmap}}... ! Undefined control sequence. l.11317 ...{\LinkA{dev2bitmap}{dev2bitmap}}, \code {\LinkA{bitmap}{bitmap}} and ! Undefined control sequence. l.11317 ...{dev2bitmap}{dev2bitmap}}, \code{\LinkA {bitmap}{bitmap}} and ! Undefined control sequence. l.11318 \code {\LinkA{embedFonts}{embedFonts}}. Consulted when those functio... ! Undefined control sequence. l.11318 \code{\LinkA {embedFonts}{embedFonts}}. Consulted when those functio... ! Undefined control sequence. l.11320 \code {\LinkA{system}{system}}, spaces and shell metacharacters shoul... ! Undefined control sequence. l.11320 \code{\LinkA {system}{system}}, spaces and shell metacharacters shoul... Underfull \hbox (badness 10000) in paragraph at lines 11316--11321 []\OT1/cmr/m/n/10 Optional. The path to Ghostscript, used by Underfull \hbox (badness 4341) in paragraph at lines 11316--11321 \OT1/cmr/m/n/10 dev2bitmapdev2bitmap, bitmap-bitmap and em-bed-Fontsem-bed-Font s. ! Undefined control sequence. \env {R\_HISTFILE}: l.11321 \item[\env{R\_HISTFILE}:] Optional. The path of the history file: ! Undefined control sequence. l.11322 see \LinkA {Startup}{Startup}. Consulted at startup and when the his... ! Undefined control sequence. \env {R\_HISTSIZE}: l.11324 \item[\env{R\_HISTSIZE}:] Optional. The maximum size of the history ! Undefined control sequence. l.11327 For the \code {readline} command-line interface it takes effect ! Undefined control sequence. l.11328 when the history is saved (by \code {\LinkA{savehistory}{savehistory}... ! Undefined control sequence. l.11328 when the history is saved (by \code{\LinkA {savehistory}{savehistory}... ! Undefined control sequence. \env {R\_HOME}: l.11331 \item[\env{R\_HOME}:] The top-level directory of the \R{} ! Undefined control sequence. l.11331 ...ME}:] The top-level directory of the \R {} ! Undefined control sequence. l.11332 installation: see \code {\LinkA{R.home}{R.home}}. Set by \R{}. ! Undefined control sequence. l.11332 installation: see \code{\LinkA {R.home}{R.home}}. Set by \R{}. ! Undefined control sequence. l.11332 ...ode{\LinkA{R.home}{R.home}}. Set by \R {}. ! Undefined control sequence. \env {R\_INCLUDE\_DIR}: l.11333 \item[\env{R\_INCLUDE\_DIR}:] The location of the \R{} \file{include} ! Undefined control sequence. l.11333 ..._INCLUDE\_DIR}:] The location of the \R {} \file{include} ! Undefined control sequence. l.11333 ...\_DIR}:] The location of the \R{} \file {include} ! Undefined control sequence. l.11334 directory. Set by \R {}. ! Undefined control sequence. \env {R\_LIBS}: l.11335 \item[\env{R\_LIBS}:] Optional. Used for initial setting of ! Undefined control sequence. l.11336 \code {\LinkA{.libPaths}{.libPaths}}. ! Undefined control sequence. l.11336 \code{\LinkA [65 {.libPaths}{.libPaths}}. ! Undefined control sequence. \env {R\_LIBS\_SITE}: l.11337 \item[\env{R\_LIBS\_SITE}:] Optional. Used for initial setting of ! Undefined control sequence. l.11338 \code {\LinkA{.libPaths}{.libPaths}}. ! Undefined control sequence. l.11338 \code{\LinkA {.libPaths}{.libPaths}}. ! Undefined control sequence. \env {R\_LIBS\_USER}: l.11339 \item[\env{R\_LIBS\_USER}:] Optional. Used for initial setting of ! Undefined control sequence. l.11340 \code {\LinkA{.libPaths}{.libPaths}}. ! Undefined control sequence. l.11340 \code{\LinkA {.libPaths}{.libPaths}}. ! Undefined control sequence. \env {R\_PAPERSIZE}: l.11341 \item[\env{R\_PAPERSIZE}:] Optional. Used to set the default for ! Undefined control sequence. l.11342 \code {\LinkA{options}{options}("papersize")}, e.g.~used by ! Undefined control sequence. l.11342 \code{\LinkA {options}{options}("papersize")}, e.g.~used by ! Undefined control sequence. l.11343 \code {\LinkA{pdf}{pdf}} and \code{\LinkA{postscript}{postscript}}. ! Undefined control sequence. l.11343 \code{\LinkA {pdf}{pdf}} and \code{\LinkA{postscript}{postscript}}. ! Undefined control sequence. l.11343 \code{\LinkA{pdf}{pdf}} and \code {\LinkA{postscript}{postscript}}. ! Undefined control sequence. l.11343 \code{\LinkA{pdf}{pdf}} and \code{\LinkA {postscript}{postscript}}. Underfull \hbox (badness 3514) in paragraph at lines 11341--11344 []\OT1/cmr/m/n/10 Optional. Used to set the de-fault for op-tion-sop- ! Undefined control sequence. \env {R\_PCRE\_JIT\_STACK\_MAXSIZE}: l.11344 \item[\env{R\_PCRE\_JIT\_STACK\_MAXSIZE}:] Optional. Consulted when ! Undefined control sequence. l.11345 ...tern compiler is first used. See \code {\LinkA{grep}{grep}}. ! Undefined control sequence. l.11345 ...mpiler is first used. See \code{\LinkA {grep}{grep}}. ! Undefined control sequence. \env {R\_PDFVIEWER}: l.11346 \item[\env{R\_PDFVIEWER}:] The path to the default PDF viewer. Used ! Undefined control sequence. l.11347 by \command {R CMD Rd2pdf}. ! Undefined control sequence. \env {R\_PLATFORM}: l.11348 \item[\env{R\_PLATFORM}:] The platform -- a string of the form ! Undefined control sequence. l.11349 \code {\var{cpu}-\var{vendor}-\var{os}}, see \code{\LinkA{R.Version}{... ! Undefined control sequence. l.11349 \code{\var {cpu}-\var{vendor}-\var{os}}, see \code{\LinkA{R.Version}{... ! Undefined control sequence. l.11349 \code{\var{cpu}-\var {vendor}-\var{os}}, see \code{\LinkA{R.Version}{... ! Undefined control sequence. l.11349 \code{\var{cpu}-\var{vendor}-\var {os}}, see \code{\LinkA{R.Version}{... ! Undefined control sequence. l.11349 ...{cpu}-\var{vendor}-\var{os}}, see \code {\LinkA{R.Version}{R.Versi... ! Undefined control sequence. l.11349 ...var{vendor}-\var{os}}, see \code{\LinkA {R.Version}{R.Version}}. ! Undefined control sequence. \env {R\_PROFILE}: l.11350 \item[\env{R\_PROFILE}:] Optional. The path to the site profile ! Undefined control sequence. l.11351 file: see \LinkA {Startup}{Startup}. Consulted at startup. ! Undefined control sequence. \env ] {R\_RD4PDF}: l.11352 \item[\env{R\_RD4PDF}:] Options for \command{pdflatex} processing of ! Undefined control sequence. l.11352 ...[\env{R\_RD4PDF}:] Options for \command {pdflatex} processing of ! Undefined control sequence. l.11353 \code {Rd} files. Used by \command{R CMD Rd2pdf}. ! Undefined control sequence. l.11353 \code{Rd} files. Used by \command {R CMD Rd2pdf}. ! Undefined control sequence. \env {R\_SHARE\_DIR}: l.11354 \item[\env{R\_SHARE\_DIR}:] The location of the \R{} \file{share} ! Undefined control sequence. l.11354 ...R\_SHARE\_DIR}:] The location of the \R {} \file{share} ! Undefined control sequence. l.11354 ...\_DIR}:] The location of the \R{} \file {share} ! Undefined control sequence. l.11355 directory. Set by \R {}. ! Undefined control sequence. \env {R\_TEXI2DVICMD}: l.11356 \item[\env{R\_TEXI2DVICMD}:] The path to \command{texi2dvi}. ! Undefined control sequence. l.11356 ...{R\_TEXI2DVICMD}:] The path to \command {texi2dvi}. ! Undefined control sequence. l.11357 Defaults to the value of \env {TEXI2DVI}, and if that is unset to a ! Undefined control sequence. l.11358 value determined when \R {} was built. ! Undefined control sequence. l.11360 \code {\LinkA{options}{options}("texi2dvi")}, used by ! Undefined control sequence. l.11360 \code{\LinkA {options}{options}("texi2dvi")}, used by ! Undefined control sequence. l.11361 \code {\LinkA{texi2dvi}{texi2dvi}} and \code{\LinkA{texi2pdf}{texi2pd... ! Undefined control sequence. l.11361 \code{\LinkA {texi2dvi}{texi2dvi}} and \code{\LinkA{texi2pdf}{texi2pd... ! Undefined control sequence. l.11361 ...e{\LinkA{texi2dvi}{texi2dvi}} and \code {\LinkA{texi2pdf}{texi2pdf... ! Undefined control sequence. l.11361 ...A{texi2dvi}{texi2dvi}} and \code{\LinkA {texi2pdf}{texi2pdf}} in p... ! Undefined control sequence. l.11361 ...kA{texi2pdf}{texi2pdf}} in package \pkg {tools}. Underfull \hbox (badness 1259) in paragraph at lines 11356--11362 []\OT1/cmr/m/n/10 The path to texi2dvi. De-faults to the value of ! Undefined control sequence. \env {R\_UNZIPCMD}: l.11363 \item[\env{R\_UNZIPCMD}:] The path to \command{unzip}. Sets the ! Undefined control sequence. l.11363 ...env{R\_UNZIPCMD}:] The path to \command {unzip}. Sets the ! Undefined control sequence. l.11364 initial value for \code {\LinkA{options}{options}("unzip")} on a Unix... ! Undefined control sequence. l.11364 initial value for \code{\LinkA {options}{options}("unzip")} on a Unix... ! Undefined control sequence. l.11365 when namespace \pkg {utils} is loaded. ! Undefined control sequence. \env {R\_ZIPCMD}: l.11366 \item[\env{R\_ZIPCMD}:] The path to \command{zip}. Used by ! Undefined control sequence. l.11366 ...[\env{R\_ZIPCMD}:] The path to \command {zip}. Used by ! Undefined control sequence. l.11367 \code {\LinkA{zip}{zip}} and by \command{R CMD INSTALL --build} on Wi... ! Undefined control sequence. l.11367 \code{\LinkA {zip}{zip}} and by \command{R CMD INSTALL --build} on Wi... ! Undefined control sequence. l.1136]7 \code{\LinkA{zip}{zip}} and by \command {R CMD INSTALL --build} on Wi... [113] ! Undefined control sequence. \env {TMPDIR}, \env {TMP}, \env {TEMP}: l.11368 ...m[\env{TMPDIR}, \env{TMP}, \env{TEMP}:] Consulted (in that ! Undefined control sequence. \env {TMPDIR}, \env {TMP}, \env {TEMP}: l.11368 ...m[\env{TMPDIR}, \env{TMP}, \env{TEMP}:] Consulted (in that ! Undefined control sequence. \env {TMPDIR}, \env {TMP}, \env {TEMP}: l.11368 ...m[\env{TMPDIR}, \env{TMP}, \env{TEMP}:] Consulted (in that ! Undefined control sequence. l.11370 \code {\LinkA{tempdir}{tempdir}}. \env{TMPDIR} is also used by some ... ! Undefined control sequence. l.11370 \code{\LinkA {tempdir}{tempdir}}. \env{TMPDIR} is also used by some ... ! Undefined control sequence. l.11370 \code{\LinkA{tempdir}{tempdir}}. \env {TMPDIR} is also used by some ... ! Undefined control sequence. l.11371 utilities see the help for \code {\LinkA{build}{build}}. ! Undefined control sequence. l.11371 utilities see the help for \code{\LinkA {build}{build}}. ! Undefined control sequence. \env {TZ}: l.11372 \item[\env{TZ}:] Optional. The current time zone. See ! Undefined control sequence. l.11373 \code {\LinkA{Sys.timezone}{Sys.timezone}} for the system-specific ! Undefined control sequence. l.11373 \code{\LinkA {Sys.timezone}{Sys.timezone}} for the system-specific ! Undefined control sequence. \env {no\_proxy}, \env {http\_proxy}, \env {ftp\_proxy}: l.11375 ..., \env{http\_proxy}, \env{ftp\_proxy}:] ! Undefined control sequence. \env {no\_proxy}, \env {http\_proxy}, \env {ftp\_proxy}: l.11375 ..., \env{http\_proxy}, \env{ftp\_proxy}:] ! Undefined control sequence. ...o\_proxy}, \env {http\_proxy}, \env {ftp\_proxy}: l.11375 ..., \env{http\_proxy}, \env{ftp\_proxy}:] ! Undefined control sequence. l.11376 (and more). Optional. Settings for \code {\LinkA{download.file}{dow... ! Undefined control sequence. l.11376 .... Optional. Settings for \code{\LinkA {download.file}{download.f... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11381 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11383 \begin{Section} {Unix-specific} ! Undefined control sequence. \env {DISPLAY}: l.11387 \item[\env{DISPLAY}:] Optional: used by \code{\LinkA{X11}{X11}}, Tk (in ! Undefined control sequence. l.11387 ...\env{DISPLAY}:] Optional: used by \code {\LinkA{X11}{X11}}, Tk (in ! Undefined control sequence. l.11387 ...SPLAY}:] Optional: used by \code{\LinkA {X11}{X11}}, Tk (in ! Undefined control sequence. l.11388 package \pkg {tcltk}), the data editor and various packages. ! Undefined control sequence. \env [78 [66 {EDITOR}: l.11389 \item[\env{EDITOR}:] The path to the default editor: sets the ! Undefined control sequence. l.11390 default for \code {\LinkA{options}{options}("editor")} when namespace ! Undefined control sequence. l.11390 default for \code{\LinkA {options}{options}("editor")} when namespace ! Undefined control sequence. l.11391 \pkg {utils} is loaded. ! Undefined control sequence. \env {PAGER}: l.11392 \item[\env{PAGER}:] The path to the pager with the default setting of ! Undefined control sequence. l.11393 \code {\LinkA{options}{options}("pager")}. The default value is chose... ! Undefined control sequence. l.11393 \code{\LinkA {options}{options}("pager")}. The default value is chose... ! Undefined control sequence. l.11394 ...ration, usually as the path to \command {less}. ! Undefined control sequence. \env {R\_PRINTCMD}: l.11395 \item[\env{R\_PRINTCMD}:] Sets the default for ! Undefined control sequence. l.11396 \code {\LinkA{options}{options}("printcmd")}, which sets the default ... ! Undefined control sequence. l.11396 \code{\LinkA {options}{options}("printcmd")}, which sets the default ... ! Undefined control sequence. l.11397 command to be used by \code {\LinkA{postscript}{postscript}}. ! Undefined control sequence. l.11397 command to be used by \code{\LinkA {postscript}{postscript}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11401 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11403 \begin{SeeAlso} \relax ! Undefined control sequence. l.11404 \code {\LinkA{Sys.getenv}{Sys.getenv}} and \code{\LinkA{Sys.setenv}{S... ! Undefined control sequence. l.11404 \code{\LinkA {Sys.getenv}{Sys.getenv}} and \code{\LinkA{Sys.setenv}{S... ! Undefined control sequence. l.11404 ...inkA{Sys.getenv}{Sys.getenv}} and \code {\LinkA{Sys.setenv}{Sys.se... ! Undefined control sequence. l.11404 ...s.getenv}{Sys.getenv}} and \code{\LinkA {Sys.setenv}{Sys.setenv}} ... ! Undefined control sequence. l.11405 environmental variables in an \R {} session. ! Undefined control sequence. l.11407 \code {\LinkA{gctorture}{gctorture}} for environment variables contro... ! Undefined control sequence. l.11407 \code{\LinkA {gctorture}{gctorture}} for environment variables contro... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11409 \end{SeeAlso} ! Undefined control sequence. l.11410 \HeaderA {eval}{Evaluate an (Unevaluated) Expression}{eval} ! Undefined control sequence. l.11411 \methaliasA {eval.parent}{eval}{eval.parent} ! Undefined control sequence. l.11412 \aliasA {evalq}{eval}{evalq} ! Undefined control sequence. l.11413 \aliasA {local}{eval}{local} ! Undefined control sequence. l.11414 \keyword {data}{eval} ! Undefined control sequence. l.11415 \keyword ] {programming}{eval} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11417 \begin{Description} \relax ! Undefined control sequence. l.11418 Evaluate an \R {} expression in a specified environment. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11419 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11421 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11430 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11432 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11433 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11434 \item[\code{expr}] an object to be evaluated. See `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11435 \item[\code{envir}] the \code{\LinkA{environment}{environment}} in w... ! Undefined control sequence. l.11435 \item[\code{envir}] the \code {\LinkA{environment}{environment}} in w... ! Undefined control sequence. l.11435 \item[\code{envir}] the \code{\LinkA {environment}{environment}} in w... ! Undefined control sequence. l.11435 ...vironment}{environment}} in which \code {expr} is to ! Undefined control sequence. l.11436 be evaluated. May also be \code {NULL}, a list, a data frame, ! Undefined control sequence. l.11437 ...ist or an integer as specified to \code {\LinkA{sys.call}{sys.call}}. ! Undefined control sequence. l.11437 ...an integer as specified to \code{\LinkA {sys.call}{sys.call}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11438 \item[\code{enclos}] Relevant when \code{envir} is a (pair)list or a... ! Undefined control sequence. l.11438 \item[\code{enclos}] Relevant when \code ] {envir} is a (pair)list or a... ! Undefined control sequence. l.11439 Specifies the enclosure, i.e., where \R {} looks for objects not found ! Undefined control sequence. l.11440 in \code {envir}. This can be \code{NULL} (interpreted as the base ! Undefined control sequence. l.11440 in \code{envir}. This can be \code {NULL} (interpreted as the base ! Undefined control sequence. l.11441 package environment, \code {\LinkA{baseenv}{baseenv}()}) or an enviro... ! Undefined control sequence. l.11441 package environment, \code{\LinkA {baseenv}{baseenv}()}) or an enviro... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11442 \item[\code{n}] number of parent generations to go back ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11443 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11444 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11446 \begin{Details} \relax ! Undefined control sequence. l.11447 \code {eval} evaluates the \code{expr} argument in the ! Undefined control sequence. l.11447 \code{eval} evaluates the \code {expr} argument in the ! Undefined control sequence. l.11448 environment specified by \code {envir} and returns the computed value. ! Undefined control sequence. l.11449 If \code {envir} is not specified, then the default is ! Undefined control sequence. l.11450 \code {\LinkA{parent.frame}{parent.frame}()} (the environment where t... ! Undefined control sequence. l.11450 \code{\LinkA {parent.frame}{parent.frame}()} (the environment where t... ! Undefined control sequence. l.11451 \code {eval} was made). ! Undefined control sequence. l.11453 ...s to be evaluated can be of types \code {\LinkA{call}{call}} or ! Undefined control sequence. l.11453 ... evaluated can be of types \code{\LinkA {call}{call}} or ! Undefined control sequence. l.11454 \code {\LinkA{expression}{expression}} or \LinkA{name}{name} (when th... ! Undefined control sequence. l.11454 \code{\LinkA {expression}{expression}} or \LinkA{name}{name} (when th... ! Undefined control sequence. l.11454 ...inkA{expression}{expression}} or \LinkA {name}{name} (when the nam... ! Undefined control sequence. l.11455 ...and its binding is evaluated), a \LinkA {promise}{promise} [114] [67 ! Undefined control sequence. l.11459 The \code {evalq} form is equivalent to \code{eval(quote(expr), ...)}. ! Undefined control sequence. l.11459 ...code{evalq} form is equivalent to \code {eval(quote(expr), ...)}. ! Undefined control sequence. l.11460 \code {eval} evaluates its first argument in the current scope ! Undefined control sequence. l.11461 before passing it to the evaluator: \code {evalq} avoids this. ! Undefined control sequence. l.11463 \code {eval.parent(expr, n)} is a shorthand for ! Undefined control sequence. l.11464 \code {eval(expr, parent.frame(n))}. ! Undefined control sequence. l.11466 If \code {envir} is a list (such as a data frame) or pairlist, it is ! Undefined control sequence. l.11467 ...orary environment (with enclosure \code {enclos}), ! Undefined control sequence. l.11469 \code {expr} changes any of the components named in the (pair)list, the ! Undefined control sequence. l.11472 If \code {envir} is \code{NULL} it is interpreted as an empty list so ! Undefined control sequence. l.11472 If \code{envir} is \code {NULL} it is interpreted as an empty list so ! Undefined control sequence. l.11473 no values could be found in \code {envir} and look-up goes directly to ! Undefined control sequence. l.11474 \code {enclos}. ! Undefined control sequence. l.11476 \code {local} evaluates an expression in a local environment. It is ! Undefined control sequence. l.11477 equivalent to \code {evalq} except that its default argument creates a ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11481 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11483 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11486 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11488 \begin{Note} \relax ! Undefined control sequence. l.11490 between \R {} and S in this area. In particular, the default enclosure ! Undefined control sequence. l.11496 \code {eval(x, data, parent.frame())}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11497 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11499 \begin{References} \relax ! Undefined control sequence. l.11502 Wadsworth \& Brooks/Cole. (\code {eval} only.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type Underfull \hbox (badness 10000) in paragraph at lines 6904--6908 []@textrm As of R ver-sion 3.2.0, a num-ber of macros are de-fined in the file Underfull \hbox (badness 4686) in paragraph at lines 6904--6908 @textrm `@texttt share/Rd/macros/system.Rd[]@textrm '[] of the R source or home di-rec-tory, and these will [79H for immediate help. ... l.11503 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11505 \begin{SeeAlso} \relax ! Undefined control sequence. l.11506 \code {\LinkA{expression}{expression}}, \code{\LinkA{quote}{quote}}, ... ! Undefined control sequence. l.11506 \code{\LinkA {expression}{expression}}, \code{\LinkA{quote}{quote}}, ... ! Undefined control sequence. l.11506 ...{\LinkA{expression}{expression}}, \code {\LinkA{quote}{quote}}, \c... ! Undefined control sequence. l.11506 ...{expression}{expression}}, \code{\LinkA {quote}{quote}}, \code{\Li... ! Undefined control sequence. l.11506 ...n}}, \code{\LinkA{quote}{quote}}, \code {\LinkA{sys.frame}{sys.fra... ! Undefined control sequence. l.11506 ...ode{\LinkA{quote}{quote}}, \code{\LinkA {sys.frame}{sys.frame}}, ! Undefined control sequence. l.11507 \code {\LinkA{parent.frame}{parent.frame}}, \code{\LinkA{environment}... ! Undefined control sequence. l.11507 \code{\LinkA {parent.frame}{parent.frame}}, \code{\LinkA{environment}... ! Undefined control sequence. l.11507 ...nkA{parent.frame}{parent.frame}}, \code {\LinkA{environment}{envir... ! Undefined control sequence. l.11507 ...ent.frame}{parent.frame}}, \code{\LinkA {environment}{environment}}. ! Undefined control sequence. l.11509 Further, \code {\LinkA{force}{force}} to \emph{force} evaluation, typ... ! Undefined control sequence. l.11509 Further, \code{\LinkA {force}{force}} to \emph{force} evaluation, typ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11511 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11513 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11514 \begin{ExampleCode} ! Missing $ inserted. $ l.11515 eval(2 ^ 2 ^ 3) ! Double superscript. l.11515 eval(2 ^ 2 ^ 3) ! Double superscript. l.11516 mEx <- expression(2^2^ 3); mEx; 1 + eval(mEx) ! Missing $ inserted. $ l.11518 Underfull \hbox (badness 2980) in paragraph at lines 11509--11518 []\OT1/cmr/m/n/10 Further, force-force to \OT1/cmr/m/it/10 force \OT1/cmr/m/n/1 0 eval-u-a-tion, typ-i-cally of func-tion ar-gu- Underfull \hbox (badness 3930) in paragraph at lines 11509--11518 \OT1/cmr/m/n/10 ments. eval(2 $[][])\OML/cmm/m/it/10 mEx < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 expression\OT1/cmr/m/n/10 (2[][]); \OML/cmm/m/it/10 mEx\OT1 /cmr/m/n/10 ; 1 + ! You can't use `macro parameter character #' in horizontal mode. l.11519 ...lq(a+b+aa, list(a = 1)), list(b = 5)) # == 10] ! You can't use `macro parameter character #' in horizontal mode. l.11520 ...valq(a+b+aa, -1), list(b = 5)) # == 12 ! You can't use `macro parameter character #' in horizontal mode. l.11524 # # Evaluate a in e1 ! You can't use `macro parameter character #' in horizontal mode. l.11524 ## Evaluate a in e1 ! You can't use `macro parameter character #' in horizontal mode. l.11526 # # evaluate the expression bound to a in e1 ! You can't use `macro parameter character #' in horizontal mode. l.11526 ## evaluate the expression bound to a in e1 ! You can't use `macro parameter character #' in horizontal mode. l.11531 tst.ev() # -> aa : 7, eval : 4.14 ! You can't use `macro parameter character #' in horizontal mode. l.11534 with(a, a <- 5) # alters the copy of a from the list, discarded. ! You can't use `macro parameter character #' in vertical mode. l.11536 # # ! You can't use `macro parameter character #' in vertical mode. l.11536 ## ! You can't use `macro parameter character #' in vertical mode. l.11537 # # Example of evalq() ! You can't use `macro parameter character #' in vertical mode. l.11537 ## Example of evalq() ! You can't use `macro parameter character #' in horizontal mode. l.11538 # # ! You can't use `macro parameter character #' in horizontal mode. l.11538 ## ! You can't use `macro parameter character #' in horizontal mode. l.11543 # # this version changes the visible copy of N only, since the argument ! You can't use `macro parameter character #' in horizontal mode. l.11543 ## this version changes the visible copy of N only, since the argument ! You can't use `macro parameter character #' in horizontal mode. l.11544 # # passed to eval is '4'. ! You can't use `macro parameter character #' in horizontal mode. l.11544 ## passed to eval is '4'. ! You can't use `macro parameter character #' in horizontal mode. l.11548 # # this version does the assignment in env, and changes N only there. ! You can't use `macro parameter character #' in horizontal mode. l.11548 ## this version does the assignment in env, and changes N only there. ! You can't use `macro parameter character #' in vertical mode. l.11554 # # ! You can't use `macro parameter character #' in vertical mode. l.11554 ## ! You can't use `macro parameter character #' in vertical mode. l.11555 # # Uses of local() ! You can't use `macro parameter character #' in vertical mode. l.11555 ## Uses of local() ! You can't use `macro parameter character #' in horizontal mode. l.11556 # # ! You can't use `macro parameter character #' in horizontal mode. l.11556 ## ! You can't use `macro parameter character #' in vertical mode. l.11558 # Mutually recursive. ! You can't use `macro parameter character #' in horizontal mode. l.11559 # gg gets value of last assignment, an anonymous version of f. [115]] [68 ! You can't use `macro parameter character #' in vertical mode. l.11568 # Nesting locals: a is private storage accessible to k ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11580 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11581 \end{Examples} ! Undefined control sequence. l.11582 \HeaderA {exists}{Is an Object Defined?}{exists} ! Undefined control sequence. l.11583 \aliasA {get0}{exists}{get0} ! Undefined control sequence. l.11584 \keyword {data}{exists} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11586 \begin{Description} \relax ! Undefined control sequence. l.11587 Look for an \R {} object of the given name and possibly return it ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11588 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11590 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11598 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11600 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11601 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11602 \item[\code{x}] a variable name (given as a character string). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11603 \item[\code{where}] where to look for the object (see the details se... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11606 \item[\code{envir}] an alternative way to specify an environment to ... ! Undefined control sequence. l.11607 ...s usually simpler to just use the \code {where} argument. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11608 \item[\code{frame}] a frame in the calling list. Equivalent to giving ! Undefined control sequence. l.11609 \code {where} as \code{sys.frame(frame)}. ! Undefined control sequence. l.11609 \code{where} as \code {sys.frame(frame)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11610 \item[\code{mode}] the mode or type of object sought: see the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11612 \item[\code{inherits}] should the enclosing frames of the environmen... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11614 \item[\code{ifnotfound}] the return value of \code{get0(x, *)} when ! Undefined control sequence. l.11614 ...{ifnotfound}] the return value of \code {get0(x, *)} when ! Undefined control sequence. l.11615 \code {x} does not exist. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11616 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11617 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11619 \begin{Details} \relax ! Undefined control sequence. l.11620 The \code {where} argument can specify the environment in which to look ! Undefined control sequence. l.11622 the \code {\LinkA{search}{search}} list); as the character string nam... ! Undefined control sequence. l.11622 the \code{\LinkA {search}{search}} list); as the character string nam... ! Undefined control sequence. l.11623 element in the search list; or as an \code {\LinkA{environment}{envir... ! Undefined control sequence. l.11623 ... the search list; or as an \code{\LinkA {environment}{environment}} ! Undefined control sequence. l.11624 (including using \code {\LinkA{sys.frame}{sys.frame}} to access the c... ! Undefined control sequence. l.11624 (including using \code{\LinkA {sys.frame}{sys.frame}} to access the c... ! Undefined control sequence. l.11625 function calls). The \code {envir} argument is an alternative way to ! Undefined con]trol sequence. l.11628 ...function looks to see if the name \code {x} has a value bound to ! Undefined control sequence. l.11629 it in the specified environment. If \code {inherits} is \code{TRUE} and ! Undefined control sequence. l.11629 ...vironment. If \code{inherits} is \code {TRUE} and ! Undefined control sequence. l.11630 a value is not found for \code {x} in the specified environment, the ! Undefined control sequence. l.11631 ...nment are searched until the name \code {x} ! Undefined control sequence. l.11632 is encountered. See \code {\LinkA{environment}{environment}} and the `R ! Undefined control sequence. l.11632 is encountered. See \code{\LinkA {environment}{environment}} and the `R ! Undefined control sequence. l.11636 \bold {Warning:} ! Undefined control sequence. l.11637 \code {inherits = TRUE} is the default behaviour for \R{} but not for S. ! Undefined control sequence. l.11637 ...= TRUE} is the default behaviour for \R {} but not for S. ! Undefined control sequence. l.11639 If \code {mode} is specified then only objects of that type are sought. ! Undefined control sequence. l.11640 The \code {mode} may specify one of the collections \code{"numeric"} and ! Undefined control sequence. l.11640 ...ay specify one of the collections \code {"numeric"} and ! Undefined control sequence. l.11641 \code {"function"} (see \code{\LinkA{mode}{mode}}): any member of the ! Undefined control sequence. l.11641 \code{"function"} (see \code {\LinkA{mode}{mode}}): any member of the ! Undefined control sequence. l.11641 \code{"function"} (see \code{\LinkA {mode}{mode}}): any member of the ! Undefined control sequence. l.11643 ...tion is specified, so for example \code {mode = "special"} will ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11645 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11647 \begin{Value} ! Undefined control sequence. l.11648 \code {exists():} Logical, true if and only if an object of the correct ! Undefined control sequence. l.11651 \code {get0():} The object---as from \code{\LinkA{get}{get}(x, *)}--- ! Undefined control sequence. l.11651 \code{get0():} The object---as from \code {\LinkA{get}{get}(x, *)}--- ! Undefined control sequence. l.11651 ...0():} The object---as from \code{\LinkA {get}{get}(x, *)}--- ! Undefined control sequence. l.11652 if \code {exists(x, *)} is true, otherwise \code{ifnotfound}. ! Undefined control sequence. l.11652 ...{exists(x, *)} is true, otherwise \code {ifnotfound}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11653 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manua [80l or LaTeX Companion for explanation. Type H for immediate help. ... l.11655 \begin{Note} \relax ! Undefined control sequence. l.11656 With \code {get0()}, instead of the easy to read but somewhat ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11657 inefficient \begin{alltt} ! You can't use `macro parameter character #' in horizontal mode. l.11660 # # ... deal with r ... ! You can't use `macro parameter character #' in horizontal mode. l.11660 ## ... deal with r ... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11662 \end{alltt} ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11664 ... slightly harder to read) \begin{alltt} ! You can't use `macro parameter character #' in horizontal mode. l.11666 # # ... deal with r ... ! You can't use `macro parameter character #' in horizontal mode. l.11666 ## ... deal with r ... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11668 \end{alltt} [116]] [69 Overfull \hbox (3.59178pt too wide) in paragraph at lines 7074--7077 []@textrm Another is the Eclipse IDE with the Stat-ET plu-gin ([][]@texttt http ://www.walware.de/goto/statet[][][]@textrm ), Underfull \hbox (badness 3029) in paragraph at lines 7081--7083 []@textrm Some R front-ends pro-vide edit-ing sup-port for `@texttt .Rd[]@textr m '[] files, for ex-am-ple RStu-dio Chapter 3 ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11670 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11672 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11676 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11678 \begin{SeeAlso} \relax ! Undefined control sequence. l.11679 \code {\LinkA{get}{get}} and \code{\LinkA{hasName}{hasName}}. For qu... ! Undefined control sequence. l.11679 \code{\LinkA {get}{get}} and \code{\LinkA{hasName}{hasName}}. For qu... ! Undefined control sequence. l.11679 \code{\LinkA{get}{get}} and \code {\LinkA{hasName}{hasName}}. For qu... ! Undefined control sequence. l.11679 \code{\LinkA{get}{get}} and \code{\LinkA {hasName}{hasName}}. For qu... ! Undefined control sequence. l.11682 \code {\LinkA{missing}{missing}}; ! Undefined control sequence. l.11682 \code{\LinkA {missing}{missing}}; ! Undefined control sequence. l.11684 \code {\LinkA{file.exists}{file.exists}}. ! Undefined control sequence. l.11684 \code{\LinkA {file.exists}{file.exists}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11685 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11687 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11688 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.11689 # # Define a substitute function if necessary: ! You can't use `macro parameter character #' in horizontal mode. l.11689 ## Define a substitute function if necessary: ! Undefined control sequence. l.11691 ...fun <- function(x) { cat("some.fun(x)\n "); x } ! You can't use `macro parameter character #' in horizontal mode. l.11693 exists("ls", 2) # true even though ls is in pos = 3 ! You can't use `macro parameter character #' in horizontal mode. l.11694 exists("ls", 2, inherits = FALSE) # false ! You can't use `macro parameter character #' in vertical mode. l.11696 # # These are true (in most circumstances): ! You can't use `macro parameter character #' in vertical mode. l.11696 ## These are true (in most circumstances): ! You can't use `macro parameter character #' in horizontal mode. l.11698 identical(N [81]]ULL, get0(".foo.bar.")) # default ifnotfound = NULL (!) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11700 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11701 \end{Examples} ! Undefined control sequence. l.11702 \HeaderA {expand.grid}{Create a Data Frame from All Combinations of F... ! Undefined control sequence. l.11703 \keyword {models}{expand.grid} ! Undefined control sequence. l.11704 \keyword {array}{expand.grid} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11706 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11710 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11712 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11716 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11718 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11719 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11720 \item[\code{...}] vectors, factors or a list containing these. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11721 \item[\code{KEEP.OUT.ATTRS}] a logical indicating the \code{"out.att... ! Undefined control sequence. l.11721 ....ATTRS}] a logical indicating the \code {"out.attrs"} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11723 \item[\code{stringsAsFactors}] logical specifying if character vecto... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11725 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11726 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11728 \begin{Value} ! Undefined control sequence. l.11734 Attribute \code {"out.attrs"} is a list which gives the dimension and ! Undefined control sequence. l.11735 dimnames for use by \code {\LinkA{predict}{predict}} methods. ! Undefined control sequence. l.11735 dimnames for use by \code{\LinkA {predict}{predict}} methods. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11736 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11738 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11742 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11744 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11748 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11750 \begin{SeeAlso} \relax ! Undefined control sequence. l.11751 \code {\LinkA{combn}{combn}} (package \code{utils}) for the generation ! Undefined control sequence. l.11751 \code{\LinkA {combn}{combn}} (package \code{utils}) for the generation ! Undefined control sequence. l.11751 \code{\LinkA{combn}{combn}} (package \code {utils}) for the generation ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11753 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11755 \begin{Examples} [70 ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11756 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.11767 # #-> 5992 or 8832 (on 32- / 64-bit platform) ! You can't use `macro parameter character #' in horizontal mode. l.11767 ## -> 5992 or 8832 (on 32- / 64-bit platform) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11769 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11770 \end{Examples} ! Undefined control sequence. l.11771 \HeaderA {expression}{Unevaluated Expressions}{expression} ! Undefined control sequence. l.11772 \aliasA {as.expression}{expression}{as.expression} ! Undefined control sequence. l.11773 \methaliasA {as.expression.default}{expression}{as.expression.default} ! Undefined control sequence. l.11774 \aliasA {is.expression}{expression}{is.expression} ! Undefined control sequence. l.11775 \keyword {programming}{expression} ! Undefined control sequence. l.11776 \keyword {dplot}{expression} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11778 \begin{Description} \relax ! Undefined control sequence. l.11779 Creates or tests for objects of mode \code {"expression"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11780 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11782 \begin{Usage} Overfull \hbox (12.80621pt too wide) in paragraph at lines 11771--11783 \OT1/cmr/m/n/10 expressionUnevaluated Ex-pres-sion-sex-pres-sion as.expressione xpressionas.expression Underfull \hbox (badness 10000) in paragraph at lines 11771--11783 \OT1/cmr/m/n/10 as.expression.defaultexpressionas.expression.default Underfull \hbox (badness 7168) in paragraph at lines 11771--11783 \OT1/cmr/m/n/10 is.expressionexpressionis.expression pro-gram-ming-ex-pres-sion dplo-t-ex-pres-sion ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11789 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11791 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11792 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11793 \item[\code{...}] \code{expression}: \R{} objects, typically calls, ... ! Undefined control sequence. l.11793 \item[\code{...}] \code {expression}: \R{} objects, typically calls, ... ! Undefined control sequence. l.11793 \item[\code{...}] \code{expression}: \R {} objects, typically calls, ... ! Undefined control sequence. l.11795 \code {as.expression}: arguments to be passed to methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11796 \item[\code{x}] an arbitrary \R{} object. ! Undefined control sequence. l.11796 \item[\code{x}] an arbitrary \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11797 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11798 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11800 \begin{Details} \relax ! Undefined control sequence. l.11803 \code {\LinkA{call}{call}}) in \R{}, and an \R{} expression vector is... ! Undefined control sequence. l.11803 \code{\LinkA {call}{call}}) in \R{}, and an \R{} expression vector is... ! Undefined control sequence. l.11803 \code{\LinkA{call}{call}}) in \R {}, and an \R{} expression vector is... ! Undefined control sequence. l.11803 ...\LinkA{call}{call}}) in \R{}, and an \R {} expression vector is a ... ! Undefined control sequence. l.11804 ...s etc, for example as returned by \code {\LinkA{parse}{parse}}. ! Undefined control sequence. l.11804 ...for example as returned by \code{\LinkA {parse}{parse}}. [117] [82] ! Undefined control sequence. l.11806 As an object of mode \code {"expression"} is a list, it can be ! Undefined control sequence. l.11807 subsetted by \code {[}, \code{[[} or \code{\$}, the latter two extrac... ! Undefined control sequence. l.11807 subsetted by \code{[}, \code {[[} or \code{\$}, the latter two extrac... ! Undefined control sequence. l.11807 subsetted by \code{[}, \code{[[} or \code {\$}, the latter two extrac... ! Undefined control sequence. l.11811 \code {expression} and \code{is.expression} are \LinkA{primitive}{pri... ! Undefined control sequence. l.11811 \code{expression} and \code {is.expression} are \LinkA{primitive}{pri... ! Undefined control sequence. l.11811 ...on} and \code{is.expression} are \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.11812 \code {expression} is `special': it does not evaluate its arguments. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11813 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11815 \begin{Value} ! Undefined control sequence. l.11816 \code {expression} returns a vector of type \code{"expression"} ! Undefined control sequence. l.11816 ...ression} returns a vector of type \code {"expression"} ! Undefined control sequence. l.11819 \code {is.expression} returns \code{TRUE} if \code{expr} is an ! Undefined control sequence. l.11819 \code{is.expression} returns \code {TRUE} if \code{expr} is an ! Undefined control sequence. l.11819 ...xpression} returns \code{TRUE} if \code {expr} is an ! Undefined control sequence. l.11820 expression object and \code {FALSE} otherwise. ! Undefined control sequence. l.11822 \code {as.expression} attempts to coerce its argument into an ! Undefined control sequence. l.11825 \code {as.vector(type = "expression")} and so may dispatch methods for ! Undefined control sequence. l.11826 \code {\LinkA{as.vector}{as.vector}}.) \code{NULL}, calls, symbols (see ! Undefined control sequence. l.11826 \code{\LinkA {as.vector}{as.vector}}.) \code{NULL}, calls, symbols (see ! Undefined control sequence. l.11826 ...{\LinkA{as.vector}{as.vector}}.) \code {NULL}, calls, symbols (see ! Undefined control sequence. l.11827 \code {\LinkA{as.symbol}{as.symbol}}) and pairlists are returned as t... ! Undefined control sequence. l.11827 \code{\LinkA {as.symbol}{as.symbol}}) and pairlists are returned as t... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11832 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11834 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual ] for immediate help. ... l.11838 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11840 \begin{SeeAlso} \relax ! Undefined control sequence. l.11841 \code {\LinkA{call}{call}}, ! Undefined control sequence. l.11841 \code{\LinkA {call}{call}}, ! Undefined control sequence. l.11842 \code {\LinkA{eval}{eval}}, ! Undefined control sequence. l.11842 \code{\LinkA {eval}{eval}}, ! Undefined control sequence. l.11843 \code {\LinkA{function}{function}}. ! Undefined control sequence. l.11843 \code{\LinkA {function}{function}}. ! Undefined control sequence. l.11845 \code {\LinkA{text}{text}} and ! Undefined control sequence. l.11845 \code{\LinkA {text}{text}} and ! Undefined control sequence. l.11846 \code {\LinkA{legend}{legend}} ! Undefined control sequence. l.11846 \code{\LinkA {legend}{legend}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11848 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11850 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11851 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.11852 length(ex1 <- expression(1 + 0:9)) # 1 ! You can't use `macro parameter character #' in horizontal mode. l.11854 eval(ex1) # 1:10 ! You can't use `macro parameter character #' in horizontal mode. l.11856 length(ex3 <- expression(u, v, 1+ 0:9)) # 3 ! You can't use `macro parameter character #' in horizontal mode. l.11857 mode(ex3 [3]) # expression ! You can't use `macro parameter character #' in horizontal mode. l.11858 mode(ex3[[3]]) # call ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11860 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11861 \end{Examples} ! Undefined control sequence. l.11862 \HeaderA {Extract}{Extract or Replace Parts of an Object}{Extract} ! Undefined control sequence. l.11863 \aliasA {\$}{Extract}{.Rdol.} ! Undefined control sequence. l.11864 \aliasA {\$<\Rdash{}}{Extract}{.Rdol.<.Rdash.} ! Undefined control sequence. l.11864 \aliasA{\$<\Rdash {}}{Extract}{.Rdol.<.Rdash.} ! Undefined control sequence. l.11865 \aliasA {getElement}{Extract}{getElement} ! Undef [83ined control sequence. l.11866 \aliasA {Subscript}{Extract}{Subscript} ! Undefined control sequence. l.11867 \aliasA {[}{Extract}{[} ! Undefined control sequence. l.11868 \methaliasA {[.Dlist}{Extract}{[.Dlist} ! Undefined control sequence. l.11869 \methaliasA {[.listof}{Extract}{[.listof} ! Undefined control sequence. l.11870 \methaliasA {[.simple.list}{Extract}{[.simple.list} ! Undefined control sequence. l.11871 \aliasA {[<\Rdash{}}{Extract}{[<.Rdash.} ! Undefined control sequence. l.11871 \aliasA{[<\Rdash {}}{Extract}{[<.Rdash.} ! Undefined control sequence. l.11872 \aliasA {[[}{Extract}{[[} ! Undefined control sequence. l.11873 \aliasA {[[<\Rdash{}}{Extract}{[[<.Rdash.} ! Undefined control sequence. l.11873 \aliasA{[[<\Rdash {}}{Extract}{[[<.Rdash.} ! Undefined control sequence. l.11874 \keyword {array}{Extract} ! Undefined control sequence. l.11875 \keyword {list}{Extract} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11877 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11880 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11882 \begin{Usage} Underfull \hbox (badness 1484) in paragraph at lines 11856--11883 \OT1/cmr/m/n/10 mode(ex3[[3]]) call rm(ex3) Ex-tractEx-tract or Re-place Par ts of an ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11896 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11898 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11899 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11900 \item[\code{x, object}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11903 \item[\code{i, j, ...}] ! Undefined control sequence. l.11905 \code {numeric} or \code{character} vectors or empty (missing) or ! Undefined control sequence. l.11905 \code{numeric} or \code {character} vectors or empty (missing) or ! Undefined control sequence. l.11906 \code {NULL}. Numeric values are coerced to integer as by ! Undefi]ned control sequence. l.11907 \code {\LinkA{as.integer}{as.integer}} (and hence truncated towards z... ! Undefined control sequence. l.11907 \code{\LinkA {as.integer}{as.integer}} (and hence truncated towards z... ! Undefined control sequence. l.11908 ...er vectors will be matched to the \code {\LinkA{names}{names}} of the ! Undefined control sequence. l.11908 ...ors will be matched to the \code{\LinkA {names}{names}} of the ! Undefined control sequence. l.11909 object (or for matrices/arrays, the \code {\LinkA{dimnames}{dimnames}}): ! Undefined control sequence. l.11909 ...r for matrices/arrays, the \code{\LinkA {dimnames}{dimnames}}): [118] ! Undefined control sequence. l.11912 For \code {[}-indexing only: \code{i}, \code{j}, \code{...} can be ! Undefined control sequence. l.11912 For \code{[}-indexing only: \code {i}, \code{j}, \code{...} can be ! Undefined control sequence. l.11912 ...\code{[}-indexing only: \code{i}, \code {j}, \code{...} can be ! Undefined control sequence. l.11912 ...ndexing only: \code{i}, \code{j}, \code {...} can be ! Undefined control sequence. l.11915 \code {i}, \code{j}, \code{...} can also be negative integers, ! Undefined control sequence. l.11915 \code{i}, \code {j}, \code{...} can also be negative integers, ! Undefined control sequence. l.11915 \code{i}, \code{j}, \code {...} can also be negative integers, ! Undefined control sequence. l.11918 When indexing arrays by \code {[} a single argument \code{i} can be a ! Undefined control sequence. l.11918 ...ays by \code{[} a single argument \code {i} can be a ! Undefined control sequence. l.11919 ...olumns as there are dimensions of \code {x}; the ! Undefined control sequence. l.11921 indices in each row of \code {i}. ! Undefined control sequence. l.11923 An index value of \code {NULL} is treated as if it were \code{integer... ! Undefined control sequence. l.11923 ...de{NULL} is treated as if it were \code {integer(0)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11925 \item[\code{name}] ! Undefined control sequence. l.11926 A literal character string or a \LinkA {name}{name} (possibly \LinkA{... ! Undefined control sequence. l.11926 ...r a \LinkA{name}{name} (possibly \LinkA {backtick}{backtick} ! Undefined control sequence. l.11928 ...nments') partially matched to the \code {\LinkA{names}{names}} ! Undefined control sequence. l.11928 ...) partially matched to the \code{\LinkA {names}{names}} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11931 \item[\code{drop}] For matrices and arrays. If \code{TRUE} the resu... ! Undefined control sequence. l.11931 ...op}] For matrices and arrays. If \code {TRUE} the result is ! Undefined control sequence. l.11934 \code {\LinkA{drop}{drop}} for further details. ! Undefined control sequence. l.11934 \code{\LinkA {drop}{drop}} for further details. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11936 \item[\code{exact}] Controls possible partial matching of \code{[[} ... ! Undefined control sequence. l.11936 ...rols possible partial matching of \code {[[} when ! Undefined control sequence. l.11939 \code {NA} allows partial matching but issues a warning when it ! Undefined control sequence. l.11940 occurs. Value \code {FALSE} allows partial matching without any ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11942 \item[\code{value}] typically an array-like \R{} object of a similar... ! Undefined control sequence. l.11942 ...code{value}] typically an array-like \R {} object of a similar cla... ! Undefined control sequence. l.11943 \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11944 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11945 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11947 \begin{Details} \relax ! Undefined control sequence. l.11949 of specific classes of objects, see \LinkA {InternalMethods}{Internal... ! Undefined control sequence. l.11950 \code {\LinkA{[.data.frame}{[.data.frame}} and \code{\LinkA{[.factor}... ! Undefined control sequence. l.11950 \code{\LinkA {[.data.frame}{[.data.frame}} and \code{\LinkA{[.factor}... ! Undefined control sequence. l.11950 ...{[.data.frame}{[.data.frame}} and \code {\LinkA{[.factor}{[.factor... ! Undefined control sequence. l.11950 ....frame}{[.data.frame}} and \code{\LinkA {[.factor}{[.factor}}. The ! Undefined control sequence. l.11953 \code {[<-}, \code{[[<-} and \code{\$<-} for use when indexing occurs on ! Undefined control sequence. l.11953 \code{[<-}, \code {[[<-} and \code{\$<-} for use when indexing occurs on ! Undefined control sequence. l.11953 \code{[<-}, \code{[[<-} and \code {\$<-} for use when indexing occurs on ! Undefined control sequence. l.11956 ...ost important distinction between \code {[}, \code{[[} and ! Undefined control sequence. l.11956 ...ant distinction between \code{[}, \code {[[} and ! Undefined control sequence. l.11957 \code {\$} is that the \code{[} can select more than one element whereas ! Undefined control sequence. l.11957 \code{\$} is that the \code {[} can select more than one element whereas ! Undefined control sequence. l.11962 \code {\LinkA{is.recursive}{is.recursive}}) objects. \code{\$} is on... ! Undefined control sequence. l.11962 \code{\LinkA {is.recursive}{is.recursive}}) objects. \code{\$} is on... ! Undefined control sequence. l.11962 ...ursive}{is.recursive}}) objects. \code {\$} is only valid for ! Undefined control sequence. l.11967 \code {names}, \code{dim} and \code{dimnames}. ! Undefined control sequence. l.11967 \code{names}, \code {dim} and \code{dimnames}. ! Undefined control sequence. l.11967 \code{names}, \code{dim} and \code {dimnames}. ! Undefined control sequence. l.11972 ...subassignment}) then that part of \code {x} is set to the value ! Undefined control sequence. l.11976 be of the higher of the types of \code {x} and \code{value} in the ! Undefined control sequence. l.11976 ...gher of the types of \code{x} and \code {value} in the ! Undefined control sequence. l.11978 ...ttributes are preserved (although \code {names}, ! Undefined control sequence. l.11979 \code {dim} and \code{dimnames} will be adjusted suitably). ! Undefined control sequence. l.11979 \code{dim} and \code {dimnames} will be adjusted suitably). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11985 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11987 \begin{Section} {Atomic vectors} ! Undefined control sequence. l.11988 The usual form of indexing is \code {[}. \code{[[} can be used to ! Undefined control sequence. l.11988 ...al form of indexing is \code{[}. \code {[[} can be used to ! Undefined control sequence. l.11989 ... a single element \emph{dropping} \code {\LinkA{names}{names}}, wh... ! Undefined control sequence. l.11989 ...le element \emph{dropping} \code{\LinkA {names}{names}}, whereas ! Undefined control sequence. l.11990 \code {[} keeps them, e.g., in \code{c(abc = 123)[1]}. ! Undefined control sequence. l.11990 \code{[} keeps them, e.g., in \code {c(abc = 123)[1]}. [119 [84]] ! Undefined control sequence. l.11992 The index object \code {i} can be numeric, logical, character or empty. ! Undefined control sequence. l.11994 numeric codes (see \code {\LinkA{factor}{factor}}) and not by the cha... ! Undefined control sequence. l.11994 numeric codes (see \code{\LinkA {factor}{factor}}) and not by the cha... ! Undefined control sequence. l.11995 ... which are printed (for which use \code {[as.character(i)]}). ! Undefined control sequence. l.11998 all the entries but keep the \code {\LinkA{attributes}{attributes}}. ! Undefined control sequence. l.11998 all the entries but keep the \code{\LinkA {attributes}{attributes}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11999 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12001 \begin{Section} {Matrices and arrays} ! Undefined control sequence. l.12004 ... will be an unnamed vector unless \code {x} is one-dimensional ! Undefined control sequence. l.12007 The most common form of indexing a \eqn {k}{}-dimensional array is to ! Undefined control sequence. l.12008 specify \eqn {k}{} indices to \code{[}. As for vector indexing, the ! Undefined control sequence. l.12008 specify \eqn{k}{} indices to \code {[}. As for vector indexing, the ! Undefined control sequence. l.12012 The argument \code {drop} applies to this form of indexing. ! Undefined control sequence. l.12017 not allowed in the index matrix. \code {NA} and zero values are allo... ! Undefined control sequence. l.12019 containing an \code {NA} produce an \code{NA} in the result. ! Undefined control sequence. l.12019 containing an \code{NA} produce an \code {NA} in the result. ! Undefined control sequence. l.12025 \code {NA} is allowed and will produce an \code{NA} in the result. ! Undefined control sequence. l.12025 ...A} is allowed and will produce an \code {NA} in the result. ! Undefined control sequence. l.12026 ...ices as well as the empty string (\code {""}) are not ! Undefined control sequence. l.12029 ...x indexing will be unnamed unless \code {x} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12032 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12034 \begin{Section} {Recursive (list-like) objects} ! Undefined control sequence. l.12035 Indexing by \code {[} is similar to atomic vectors and selects a list ! Undefined control sequence. l.12038 Both \code {[[} and \code{\$} select a single element of the list. The ! Undefined control sequence. l.12038 Both \code{[[} and \code {\$} select a single element of the list. The ! Undefined control sequence. l.12039 main difference is that \code {\$} does not allow computed indices, ! Undefined control sequence. l.12040 whereas \code {[[} does. \code{x\$name} is equivalent to ! Undefined control sequence. l.12040 whereas \code{[[} does. \code {x\$name} is equivalent to ! Undefined control sequence. l.12041 \code {x[["name", exact = FALSE]]}. Also, the partial matching ! Undefined control sequence. l.12042 behavior of \code {[[} can be controlled using the \code{exact} argum... ! Undefined control sequence. l.12042 ...e{[[} can be controlled using the \code {exact} argument. ! Undefined control sequence. l.12044 \code {getElement(x, name)} is a version of \code{x[[name, exact = TR... ! Undefined control sequence. l.12044 ...Element(x, name)} is a version of \code {x[[name, exact = TRUE]]} ! Undefined control sequence. l.12045 ...ally classed (S4) objects returns \code {\LinkA{slot}{slot}(x, nam... ! Undefined control sequence. l.12045 ...assed (S4) objects returns \code{\LinkA {slot}{slot}(x, name)}, ! Undefined control sequence. l.12048 \code {[} and \code{[[} are sometimes applied to other recursive ! Undefined control sequence. l.12048 \code{[} and \code {[[} are sometimes applied to other recursive ! Undefined control sequence. l.12049 objects such as \LinkA {call}{call}s and \LinkA{expression}{expressio... ! Undefined control sequence. l.12049 ... such as \LinkA{call}{call}s and \LinkA {expression}{expression}s.... ! Undefined control sequence. l.12050 coerced to lists for extraction by \code {[}, but all three operators ! Undefined control sequence. l.12053 \code {[[} can be applied recursively to lists, so that if the single ! Undefined control sequence. l.12054 index \code {i} is a vector of length \code{p}, \code{alist[[i]]} is ! Undefined control sequence. l.12054 index \code{i} is a vector of length \code {p}, \code{alist[[i]]} is ! Undefined control sequence. l.12054 ...} is a vector of length \code{p}, \code {alist[[i]]} is ! Undefined control sequence. l.12055 equivalent to \code {alist[[i1]]...[[ip]]} providing all but the ! Undefined control sequence. l.12058 ... kinds of replacement, a value of \code {NULL} ! Undefined control sequence. l.12060 \code {NULL}, you need \code{x[i] <- list(NULL)}. ! Undefined control sequence. l.12060 \code{NULL}, you need \code {x[i] <- list(NULL)}. ! Undefined control sequence. l.12062 When \code {\$<-} is applied to a \code{NULL} \code{x}, it first coerces ! Undefined control sequence. l.12062 When \code{\$<-} is applied to a \code {NULL} \code{x}, it first coerces ! Undefined control sequence. l.12062 ...\$<-} is applied to a \code{NULL} \code {x}, it first coerces ! Undefined control sequence. l.12063 \code {x} to \code{list()}. This is what also happens with \code{[[<-} ! Undefined control sequence. l.12063 \code{x} to \code {list()}. This is what also happens with \code{[[<-} ! Undefined control sequence. l.12063 .... This is what also happens with \code {[[<-} ! Undefined control sequence. l.12064 if the replacement value \code {value} is of length greater than one: ! Undefined control sequence. l.12065 if \code {value} has length 1 or 0, \code{x} is first coerced to a ! Undefined control sequence. l.12065 if \code{value} has length 1 or 0, \code {x} is first coerced to a ! Undefined control sequence. l.12066 zero-length vector of the type of \code {value}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12067 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12069 \begin{Section} {Environments} ! Undefined control sequence. l.12070 Both \code {\$} and \code{[[} can be applied to environments. Only ! Undefined control sequence. l.12070 Both \code{\$} and \code {[[} can be applied to environments. Only ! Undefined control sequence. l.12072 ... of these operations are those of \code {get(i, env = x, ! Undefined control sequence. l.12073 ...LSE)}. If no match is found then \code {NULL} is ! Undefined control sequence. l.12074 returned. The replacement versions, \code {\$<-} and \code{[[<-}, can ! Undefined control sequence. l.12074 ...acement versions, \code{\$<-} and \code {[[<-}, can ! Undefined control sequence. l.12076 semantics in this case are those of \code {assign(i, value, env = x, ! Undefined control sequence. l.12078 ...or change the existing binding in \code {x}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12079 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12081 \begin{Section} {NAs in indexing} ! Undefined control sequence. l.12082 ...a numerical, logical or character \code {NA} index picks ! Undefined control sequence. l.12083 an unknown element and so returns \code {NA} in the corresponding ! Undefined control sequence. l.12085 and \code {NULL} for a list. (It returns \code{00} for a raw result.) ! Undefined control sequence. l.12085 ...de{NULL} for a list. (It returns \code {00} for a raw result.) [120 Underfull \hbox (badness 2443) in paragraph at lines 7432--7435 []@textrm Data frames are slower than ma-tri-ces and this is an ex-am-ple of wh y. Us-ing Underfull \hbox (badness 10000) in paragraph at lines 7455--7460 []@textrm Options in-clude us-ing @texttt sprof[] @textrm for a shared ob-ject, and @texttt oprofile[] @textrm (see Underfull \hbox (badness 4927) in paragraph at lines 7455--7460 [][]@texttt http://oprofile.sourceforge.net/[][][]@textrm ) and @texttt perf[] @textrm (see [][]@texttt https://perf.wiki.kernel.org/ [85] ! Undefined control sequence. l.12088 assignment) \code {NA} does not select any element to be replaced. As ! Undefined control sequence. l.12092 ...mented behaviour of S was that an \code {NA} replacement index ! Undefined control sequence. l.12093 ...owhere' but uses up an element of \code {value}: ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12096 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12098 \begin{Section} {Argument matching} ! Undefined control sequence. l.12101 used. So \code {m[j = 2, i = 1]} is equivalent to \code{m[2, 1]} and ! Undefined control sequence. l.12101 ...m[j = 2, i = 1]} is equivalent to \code {m[2, 1]} and ! Undefined control sequence. l.12102 \strong {not} to \code{m[1, 2]}. ! Undefined control sequence. l.12102 \strong{not} to \code {m[1, 2]}. ! Undefined control sequence. l.12105 not true for the \code {data.frame} methods described in ! Undefined control sequence. l.12106 \code {\LinkA{[.data.frame}{[.data.frame}} which warn if \code{i} or ... ! Undefined control sequence. l.12106 \code{\LinkA {[.data.frame}{[.data.frame}} which warn if \code{i} or ... ! Undefined control sequence. l.12106 ...ame}{[.data.frame}} which warn if \code {i} or \code{j} ! Undefined control sequence. l.12106 ...frame}} which warn if \code{i} or \code {j} ! Undefined control sequence. l.12109 ... do not name index arguments (but \code {drop} and ! Undefined control sequence. l.12110 \code {exact} must be named). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12111 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12113 \begin{Section} {S4 methods} ! Undefined control sequence. l.12115 ... be dispatched only on S4 objects \code {x}. ! Undefined control sequence. l.12125 The implicit generics for the \code {\$} and \code{\$<-} operators do... ! Undefined control sequence. l.12125 ...it generics for the \code{\$} and \code {\$<-} operators do not ! Undefined control sequence. l.12126 have \code {name} in their signature because the grammar only allows ! Undefined control sequence. l.12127 symbols or string constants for the \code {name} argument. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12128 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion] for explanation. Type H for immediate help. ... l.12130 \begin{Section} {Character indices} ! Undefined control sequence. l.12132 \code {\LinkA{pmatch}{pmatch}}) to the names or dimnames of the objec... ! Undefined control sequence. l.12132 \code{\LinkA {pmatch}{pmatch}}) to the names or dimnames of the objec... ! Undefined control sequence. l.12134 al} p.~358)), \R {} never uses partial matching when extracting by ! Undefined control sequence. l.12135 \code {[}, and partial matching is not by default used by \code{[[} ! Undefined control sequence. l.12135 ...atching is not by default used by \code {[[} ! Undefined control sequence. l.12136 (see argument \code {exact}). ! Undefined control sequence. l.12139 ... objects (except environments) by \code {\$}. ! Undefined control sequence. l.12141 \code {\LinkA{options}{options}(warnPartialMatchDollar = TRUE)}. ! Undefined control sequence. l.12141 \code{\LinkA {options}{options}(warnPartialMatchDollar = TRUE)}. ! Undefined control sequence. l.12143 Neither empty (\code {""}) nor \code{NA} indices match any names, not ! Undefined control sequence. l.12143 Neither empty (\code{""}) nor \code {NA} indices match any names, not ! Undefined control sequence. l.12145 ...e dimnames, they are taken as all \code {""} and so match ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12147 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12149 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12153 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12155 \begin{SeeAlso} \relax ! Undefined control sequence. l.12156 \code {\LinkA{names}{names}} for details of matching to names, and ! Undefined control sequence. l.12156 \code{\LinkA {names}{names}} for details of matching to names, and ! Undefined control sequence. l.12157 \code {\LinkA{pmatch}{pmatch}} for partial matching. ! Undefined control sequence. l.12157 \code{\LinkA {pmatch}{pmatch}} for partial matching. ! Undefined control sequence. l.12159 \code {\LinkA{list}{list}}, \code{\LinkA{array}{array}}, \code{\LinkA... ! Undefined control sequence. l.12159 \code{\LinkA {list}{list}}, \code{\LinkA{array}{array}}, \code{\LinkA... ! Undefined control sequence. l.12159 \code{\LinkA{list}{list}}, \code {\LinkA{array}{array}}, \code{\LinkA... ! Undefined control sequence. l.12159 \code{\LinkA{list}{list}}, \code{\LinkA {array}{array}}, \code{\LinkA... ! Undefined control sequence. l.12159 ...t}}, \code{\LinkA{array}{array}}, \code {\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.12159 ...ode{\LinkA{array}{array}}, \code{\LinkA {matrix}{matrix}}. ! Undefined control sequence. l.12161 \code {\LinkA{[.data.frame}{[.data.frame}} and \code{\LinkA{[.factor}... ! Undefined control sequence. l.12161 \code{\LinkA {[.data.frame}{[.data.frame}} and \code{\LinkA{[.factor}... ! Undefined control sequence. l.12161 ...{[.data.frame}{[.data.frame}} and \code {\LinkA{[.factor}{[.factor... ! Undefined control sequence. l.12161 ....frame}{[.data.frame}} and \code{\LinkA {[.factor}{[.factor}} for the ! Undefined control sequence. l.12164 \code {\LinkA{Syntax}{Syntax}} for operator precedence, and the ! Undefined control sequence. l.12164 \code{\LinkA {Syntax}{Syntax}} for operator precedence, and the ! Undefined control sequence. l.12168 \code {\LinkA{NULL}{NULL}} for details of indexing null objects. ! Undefined control sequence. l.12168 \code{\LinkA {NULL}{NULL}} for details of indexing null objects. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12169 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12171 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12172 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12176 x[10] # the tenth element of x ! You can't use `macro parameter character #' in horizontal mode. l.12177 x <- x[-1] # delete the 1st element of x ! You can't use `macro parameter character #' in horizontal mode. l.12178 m[1,] # the first row of matrix m ! You can't use `macro parameter character #' in horizontal mode. l.12179 m[1, , drop = FALSE] # is a 1-row matrix ! You can't use `macro parameter character #' in horizontal mode. l.12180 m[,c(TRUE,FALSE,TRUE)]# logical indexing ! You can't use `macro parameter character #' in horizontal mode. l.12181 m[cbind(c(1,2,1),3:1)]# matrix numeric index ! You can't use `macro parameter character #' in horizontal mode. l.12183 m[ci] # matrix character index ! You can't use `macro parameter character #' in horizontal mode. l.12184 m <- m[,-1] # delete the first column of m ! You can't use `macro parameter character #' in horizontal mode. l.12185 li[[1]] # the first element of list li ! You can't use `macro parameter character #' in horizontal mode. l.12187 y[c(3, 4)] # a list containing elements 3 and 4 of y ! You can't use `macro parameter character #' in math mode. l.12188 y$a # the element of y named a ! Missing $ inserted. $ l.12189 [121 [86]] ! You can't use `macro parameter character #' in vertical mode. l.12190 # # non-integer indices are truncated: ! You can't use `macro parameter character #' in vertical mode. l.12190 ## non-integer indices are truncated: ! You can't use `macro parameter character #' in horizontal mode. l.12191 (i <- 3.999999999) # "4" is printed ! You can't use `macro parameter character #' in horizontal mode. l.12192 (1:5)[i] # 3 ! You can't use `macro parameter character #' in vertical mode. l.12194 # # named atomic vectors, compare "[" and "[[" : ! You can't use `macro parameter character #' in vertical mode. l.12194 ## named atomic vectors, compare "[" and "[[" : ! You can't use `macro parameter character #' in horizontal mode. l.12196 nx[1] ; nx["pi"] # keeps names, whereas "[[" does not: ! You can't use `macro parameter character #' in vertical mode. l.12199 # # recursive indexing into lists ! You can't use `macro parameter character #' in vertical mode. l.12199 ## recursive indexing into lists ! You can't use `macro parameter character #' in horizontal mode. l.12203 z[[c(1, 2, 1)]] # both "hello" ! You can't use `macro parameter character #' in vertical mode. l.12207 # # check $ and [[ for environments ! You can't use `macro parameter character #' in vertical mode. l.12207 ## check $ and [[ for environments ! Missing $ inserted. $ l.12214 ! You can't use `macro parameter character #' in vertical mode. l.12215 # # partial matching - possibly with warning : ! You can't use `macro parameter character #' in vertical mode. l.12215 ## partial matching - possibly with warning : ! You can't use `macro parameter character #' in horizontal mode. l.12218 stopifnot( identical(li$p, pi), # -- a warning ! You can't use `macro parameter character #' in math mode. l.12220 # # revert the warning option: ! You can't use `macro parameter character #' in math mode. l.12220 ## revert the warning option: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12222 \end{ExampleCode} ! Missing $ inserted. $ l.12222 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12223 \end{Examples} ! Undefined control sequence. l.12224 \HeaderA {Extract.data.frame}{Extract or Replace Parts of a Data Fram... ! Undefined control sequence. l.12225 \aliasA {\$.data.frame}{Extract.data.frame}{.Rdol..data.frame} ! Undefined control sequence. l.12226 \aliasA {\$<\Rdash{}.data.frame}{Extract.data.frame}{.Rdol.<.Rdash..d... ! Undefined control sequence. l.12226 \aliasA{\$<\Rdash {}.data.frame}{Extract.data.frame}{.Rdol.<.Rdash..d... ! Undefined control sequence. l.12227 \aliasA {[.data.frame}{Extract.data.frame}{[.data.frame} ! Undefined control sequence. l.12228 \aliasA {[<\Rdash{}.data.frame}{Extract.data.frame}{[<.Rdash..data.fr... ! Undefined control sequence. l.12228 \aliasA{[<\Rdash {}.data.frame}{Extract.data.frame}{[<.Rdash..data.fr... ! Undefined control sequence. l.12229 \aliasA {[[.data.frame}{Extract.data.frame}{[[.data.frame} ! Undefined control sequence. l.12230 \aliasA {[[<\Rdash{}.data.frame}{Extract.data.frame}{[[<.Rdash..data.... ! Undefined control sequence. l.12230 [87]\aliasA{[[<\Rdash {}.data.frame}{Extract.data.frame}{[[<.Rdash..data.... ! Undefined control sequence. l.12231 \keyword {array}{Extract.data.frame} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12233 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12235 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12237 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 12215--12238 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 options\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 w arnPartialMatchDollar \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 TRUE\OT1/cmr/m/n/10 )\ OML/cmm/m/it/10 stopifnot\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 identical\OT1/cmr/m/ n/10 (\OML/cmm/m/it/10 li$\OT1/cmr/m/n/10 p, Underfull \hbox (badness 10000) in paragraph at lines 12215--12238 \OT1/cmr/m/n/10 pi), -- a warn-ing in-her-its(tryCatch (li$\OML/cmm/m/it/10 p; warning \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 12215--12238 \OT1/cmr/m/n/10 Frame-Ex-tract.data.frame $.data.frameExtract.data.frame.Rdol.. data.frame Underfull \hbox (badness 10000) in paragraph at lines 12215--12238 \OT1/cmr/m/n/10 $<.data.frameExtract.data.frame.Rdol.<.Rdash..data.frame Overfull \hbox (71.80666pt too wide) in paragraph at lines 12215--12238 \OT1/cmr/m/n/10 [.data.frameExtract.data.frame[.data.frame [<.data.frameExtract .data.frame[<.Rdash..data.frame Overfull \hbox (82.9178pt too wide) in paragraph at lines 12215--12238 \OT1/cmr/m/n/10 [[.data.frameExtract.data.frame[[.data.frame [[<.data.frameExtr act.data.frame[[<.Rdash..data.frame ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12252 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12254 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12255 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12256 \item[\code{x}] data frame. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12258 \item[\code{i, j, ...}] elements to extract or replace. For \code{[... ! Undefined control sequence. l.12258 ...ments to extract or replace. For \code {[} and ! Undefined control sequence. l.12259 \code {[[}, these are \code{numeric} or \code{character} or, for ! Undefined control sequence. l.12259 \code{[[}, these are \code {numeric} or \code{character} or, for ! Undefined control sequence. l.12259 ...{[[}, these are \code{numeric} or \code {character} or, for ! Undefined control sequence. l.12260 \code {[} only, empty. Numeric values are coerced to integer as if ! Undefined control sequence. l.12261 by \code {\LinkA{as.integer}{as.integer}}. For replacement by \code{... ! Undefined control sequence. l.12261 by \code{\LinkA {as.integer}{as.integer}}. For replacement by \code{... ! Undefined control sequence. l.12261 ...as.integer}}. For replacement by \code {[}, a logical ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12264 \item[\code{name}] ! Undefined control sequence. l.12265 A literal character string or a \LinkA {name}{name} (possibly \LinkA{... ! Undefined control sequence. l.12265 ...r a \LinkA{name}{name} (possibly \LinkA {backtick}{backtick} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12268 \item[\code{drop}] logical. If \code{TRUE} the result is coerced to... ! Undefined control sequence. l.12268 \item[\code{drop}] logical. If \code {TRUE} the result is coerced to... ! Undefined control sequence. l.12270 column is left, but \bold {not} to drop if only one row is left. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12272 \item[\code{value}] A suitable replacement value: it will be repeate... ! Undefined control sequence. l.12274 Coercion section. If \code {NULL}, deletes the column if a single ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12277 \item[\code{exact}] logical: see \code{\LinkA{[}{[}}, and applies to... ! Undefined control sequence. l.12277 \item[\code{exact}] logical: see \code {\LinkA{[}{[}}, and applies to... ! Undefined control sequence. l.12277 ...\code{exact}] logical: see \code{\LinkA {[}{[}}, and applies to co... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12278 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12279 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12281 \begin{Details} \relax ! Undefined control sequence. l.12282 ...e indexed in several modes. When \code {[} and ! Undefined control sequence. l.12283 \code {[[} are used with a single vector index (\code{x[i]} or ! Undefined control sequence. l.12283 ... used with a single vector index (\code {x[i]} or ! Undefined control sequence. l.12284 \code {x[[i]]}), they index the data frame as if it were a list. In ! Undefined control sequence. l.12285 this usage a \code {drop} argument is ignored, with a warning. [122 [88]] Overfull \hbox (310.88272pt too wide) in paragraph at lines 7675--7680 [][]@texttt https://developer.apple.com/library/mac/#documentation/DeveloperToo ls/Conceptual/InstrumentsUserGuide/Introduction/Introduction.html[][][]@textrm ). Chapter 4 [89] ! Undefined control sequence. l.12287 The \code {data.frame} method for \code{\$}, treats \code{x} as a ! Undefined control sequence. l.12287 The \code{data.frame} method for \code {\$}, treats \code{x} as a ! Undefined control sequence. l.12287 ...ame} method for \code{\$}, treats \code {x} as a ! Undefined control sequence. l.12288 ...s of R-3.1.0) partial matching of \code {name} to ! Undefined control sequence. l.12289 the names of \code {x} will generate a warning; this may become an ! Undefined control sequence. l.12291 \code {value} for the correct number of rows, and replicates it if ! Undefined control sequence. l.12294 When \code {[} and \code{[[} are used with two indices (\code{x[i, j]} ! Undefined control sequence. l.12294 When \code{[} and \code {[[} are used with two indices (\code{x[i, j]} ! Undefined control sequence. l.12294 ...de{[[} are used with two indices (\code {x[i, j]} ! Undefined control sequence. l.12295 and \code {x[[i, j]]}) they act like indexing a matrix: \code{[[} can ! Undefined control sequence. l.12295 ...they act like indexing a matrix: \code {[[} can ! Undefined control sequence. l.12297 column, \code {xj} say, typically (if it is not matrix-like), the ! Undefined control sequence. l.12298 resulting column will be \code {xj[i]}, and hence rely on the ! Undefined control sequence. l.12299 corresponding \code {[} method, see the examples section. ! Undefined control sequence. l.12301 If \code {[} returns a data frame it will have unique (and non-missing) ! Undefined control sequence. l.12303 \code {\LinkA{make.unique}{make.unique}}. Similarly, if columns are ... ! Undefined control sequence. l.12303 \code{\LinkA {make.unique}{make.unique}}. Similarly, if columns are ... ! Undefined control sequence. l.12308 When \code {drop = TRUE}, this is applied to the subsetting of any ! Undefined control sequence. l.12319 For \code {[} the replacement value can be a list: each element of the ! Undefined control sequence. l.12324 contain \code {NULL} elements which will cause the corresponding ! Undefined control sequence. l.12327 Matrix indexing (\code {x[i]} with a logical or a 2-column integer ! Undefined control sequence. l.12328 matrix \code {i}) using \code{[} is not recommended. For extraction, ! Undefined control sequence. l.12328 matrix \code{i}) using \code {[} is not recommended. For extraction, ! Undefined control sequence. l.12329 \code {x} is first coerced to a matrix. For replacement, logical ! Undefined control sequence. l.12330 ... must be of the same dimension as \code {x}. ! Undefined control sequence. l.12334 Both \code {[} and \code{[[} extraction methods partially match row ! Undefined control sequence. l.12334 Both \code{[} and \code {[[} extraction methods partially match row ! Undefined control sequence. l.12335 ...partially match column names, but \code {[[} ! Undefined control sequence. l.12336 will if \code {exact = FALSE} (and with a warning if \code{exact = ! Undefined control sequence. l.12336 ...t = FALSE} (and with a warning if \code {exact = ! Undefined control sequence. l.12338 \code {\LinkA{match}{match}}, as in the examples. ! Undefined control sequence. l.12338 \code{\LinkA {match}{match}}, as in the examples. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12339 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12341 \begin{Value} ! Undefined control sequence. l.12342 For \code {[} a data frame, list or a single column (the latter two ! Undefined control sequence. l.12347 ...d this is undefined the result is \code {NULL}. ! Undefined control sequence. l.12349 For \code {[[} a column of the data frame or \code{NULL} ! Undefined control sequence. l.12349 ...[[} a column of the data frame or \code {NULL} ! Undefined control sequence. l.12353 For \code {\$}, a column of the data frame (or \code{NULL}). ! Undefined control sequence. l.12353 ...}, a column of the data frame (or \code {NULL}). ! Undefined control sequence. l.12355 For \code {[<-}, \code{[[<-} and \code{\$<-}, a data frame. ! Undefined control sequence. l.12355 For \code{[<-}, \code {[[<-} and \code{\$<-}, a data frame. ! Undefined control sequence. l.12355 For \code{[<-}, \code{[[<-} and \code {\$<-}, a data frame. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12356 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12358 \begin{Section} {Coercion} ! Undefined control sequence. l.12360 one, and one that has changed during \R {}'s development. This section [123 [90] ! Undefined control sequence. l.12363 When \code {[} and \code{[[} are used to add or replace a whole column, ! Undefined control sequence. l.12363 When \code{[} and \code {[[} are used to add or replace a whole column, ! Undefined control sequence. l.12364 no coercion takes place but \code {value} will be ! Undefined control sequence. l.12365 ... (by calling the generic function \code {\LinkA{rep}{rep}}) to the ! Undefined control sequence. l.12365 ...lling the generic function \code{\LinkA {rep}{rep}}) to the ! Undefined control sequence. l.12368 When \code {[} is used with a logical matrix, each value is coerced to ! Undefined control sequence. l.12371 When \code {[} and \code{[[} are used with two indices, the ! Undefined control sequence. l.12371 When \code{[} and \code {[[} are used with two indices, the ! Undefined control sequence. l.12376 \code {\LinkA{data.frame}{data.frame}} and \code{\LinkA{as.data.frame... ! Undefined control sequence. l.12376 \code{\LinkA {data.frame}{data.frame}} and \code{\LinkA{as.data.frame... ! Undefined control sequence. l.12376 ...inkA{data.frame}{data.frame}} and \code {\LinkA{as.data.frame}{as.... ! Undefined control sequence. l.12376 ...ta.frame}{data.frame}} and \code{\LinkA {as.data.frame}{as.data.fr... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12378 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12380 \begin{Section} {Warning} ! Undefined control sequence. l.12382 specifying \code {drop = FALSE}. To drop from a data frame to a list, ! Undefined control sequence. l.12383 \code {drop = TRUE} has to be specified explicitly. ! Undefined control sequence. l.12385 Arguments other than \code {drop} and \code{exact} should not be named: ! Undefined control sequence. l.12385 Arguments other than \code{drop} and \code {exact} should not be named: ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12388 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12390 \begin{SeeAlso} \relax ! Undefined control sequence. l.12391 \code {\LinkA{subset}{subset}} which is often easier for extraction, ! Undefined control sequence. l.12391 \code{\LinkA {subset}{subset}} which is often easier for extraction, ! Undefined control sequence. l.12392 \code {\LinkA{data.frame}{data.frame}}, \code{\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12392 \code{\LinkA {data.frame}{data.frame}}, \code{\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12392 ...{\LinkA{data.frame}{data.frame}}, \code {\LinkA{Extract}{Extract}}. ! Undefined control sequence.] l.12392 ...{data.frame}{data.frame}}, \code{\LinkA {Extract}{Extract}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12393 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12395 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12396 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12397 sw <- swiss[1:5, 1:4] # select a manageable subset ! You can't use `macro parameter character #' in horizontal mode. l.12399 sw[1:3] # select columns ! You can't use `macro parameter character #' in horizontal mode. l.12400 sw[, 1:3] # same ! You can't use `macro parameter character #' in horizontal mode. l.12401 sw[4:5, 1:3] # select rows and columns ! You can't use `macro parameter character #' in horizontal mode. l.12402 sw[1] # a one-column data frame ! You can't use `macro parameter character #' in horizontal mode. l.12403 sw[, 1, drop = FALSE] # the same ! You can't use `macro parameter character #' in horizontal mode. l.12404 sw[, 1] # a (unnamed) vector ! You can't use `macro parameter character #' in horizontal mode. l.12405 sw[[1]] # the same ! You can't use `macro parameter character #' in horizontal mode. l.12407 sw[1,] # a one-row data frame ! You can't use `macro parameter character #' in horizontal mode. l.12408 sw[1,, drop = TRUE] # a list ! You can't use `macro parameter character #' in horizontal mode. l.12410 sw["C", ] # partially matches ! You can't use `macro parameter character #' in horizontal mode. l.12411 sw[match("C", row.names(sw)), ] # no exact match ! You can't use `macro parameter character #' in horizontal mode. l.12412 try(sw[, "Ferti"]) # column names must match exactly ! You can't use `macro parameter character #' in horizontal mode. l.12415 swiss[ c(1, 1:2), ] # duplicate row, unique row names are created ! You can't use `macro parameter character #' in horizontal mode. l.12417 sw[sw <= 6] <- 6 # logical matrix indexing ! You can't use `macro parameter character #' in vertical mode. l.12420 # # adding a column ! You can't use `macro parameter character #' in vertical mode. l.12420 ## adding a column ! You can't use `macro parameter character #' in horizontal mode. l.12421 sw["new1"] <- LETTERS[1:5] # adds a character column ! You can't use `macro parameter character #' in horizontal mode. l.12422 sw[["new2"]] <- letters[1:5] # ditto ! You can't use `macro parameter character #' in horizontal mode. l.12423 sw[, "new3"] <- LETTERS[1:5] # ditto ! You can't use `macro parameter character #' in horizontal mode. l.12426 sw$new4 <- NULL # delete the column ! You can't use `macro parameter character #' in horizontal mode. l.12429 # update col. 6, delete 7, append ! You can't use `macro parameter character #' in vertical mode. l.12432 # # matrices in a data frame ! You can't use `macro parameter character #' in vertical mode. l.12432 ## matrices in a data frame ! You can't use `macro parameter character #' in horizontal mode. l.12435 A[1:3, "y"] # a matrix ! You can't use `macro parameter character #' in horizontal mode. l.12436 A[1:3, "z"] # a matrix ! You can't use `macro parameter character #' in horizontal mode. l.12437 A[, "y"] # a matrix ! You can't use `macro parameter character #' in vertical mode. l.12442 # # keeping special attributes: use a class with a ! You can't use `macro parameter character #' in vertical mode. l.12442 ## keeping special attributes: use a class with a ! You can't use `macro parameter character #' in horizontal mode. l.12443 # # "as.data.frame" and "[" method; ! You can't use `macro parameter character #' in horizontal mode. l.12443 ## "as.data.frame" and "[" method; ! You can't use `macro parameter character #' in horizontal mode. l.12444 # # "avector" := vector that keeps attributes. Could provide a cons... ! You can't use `macro parameter character #' in horizontal mode. l.12444 ## "avector" := vector that keeps attributes. Could provide a cons... ! You can't use `macro parameter character #' in horizontal mode. l.12445 # # avector <- function(x) { class(x) <- c("avector", class(x)); x } ! You can't use `macro parameter character #' in horizontal mode. l.12445 ## avector <- function(x) { class(x) <- c("avector", class(x)); x } ! You can't use `macro parameter character #' in horizontal mode. l.12456 str(d[2:4, -1]) # 'u' keeps its "unit" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12458 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12459 \end{Examples} ! Undefined control sequence. l.12460 \HeaderA {Extract.factor}{Extract or Replace Parts of a Factor}{Extra... ! Undefined control sequence. l.12461 \aliasA {[.factor}{Extract.factor}{[.factor} ! Undefined control sequence. l.12462 \aliasA {[<\Rdash{}.factor}{Extract.factor}{[<.Rdash..factor} ! Undefined control sequence. l.12462 \aliasA{[<\Rdash {}.factor}{Extract.factor}{[<.Rdash..factor} ! Undefined control sequence. l.12463 \aliasA {[[.factor}{Extract.factor}{[[.factor} ! Undefined control sequence. l.12464 \aliasA {[[<\Rdash{}.factor}{Extract.factor}{[[<.Rdash..factor} ! Undefined control sequence. l.12464 \aliasA{[[<\Rdash {}.factor}{Extract.factor}{[[<.Rdash..factor} ! Undefined control sequence. l.12465 \keyword {category}{Extract.factor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12467 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12469 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12471 \begin{Usage} Underfull \hbox (badness 3240) in paragraph at lines 12460--12472 \OT1/cmr/m/n/10 Extract.factorExtract or Re-place Parts of a Fac-torEx-tract.fa ctor [.fac- Underfull \hbox (badness 10000) in paragraph at lines 12460--12472 \OT1/cmr/m/n/10 torEx-tract.factor[.factor [<.fac-torEx-tract.factor[<.Rdash..f actor [[.fac-torEx- Underfull \hbox (badness 10000) in paragraph at lines 12460--12472 \OT1/cmr/m/n/10 tract.factor[[.factor [[<.fac-torEx-tract.factor[[<.Rdash..fact or cat-e-go-ryEx- [124 [91]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12482 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12484 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12485 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12486 \item[\code{x}] a factor ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12487 \item[\code{...}] a specification of indices -- see \code{\LinkA{Ext... ! Undefined control sequence. l.12487 ...a specification of indices -- see \code {\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12487 ...fication of indices -- see \code{\LinkA {Extract}{Extract}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12488 \item[\code{drop}] logical. If true, unused levels are dropped. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12489 \item[\code{value}] character: a set of levels. Factor values are c... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12491 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12492 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12494 \begin{Details} \relax ! Undefined control sequence. l.12498 If \code {value} is not in \code{levels(x)}, a missing value is ! Undefined control sequence. l.12498 If \code{value} is not in \code {levels(x)}, a missing value is ! Undefined control sequence. l.12501 Any \code {\LinkA{contrasts}{contrasts}} assigned to the factor are p... ! Undefined control sequence. l.12501 Any \code{\LinkA {contrasts}{contrasts}} assigned to the factor are p... ! Undefined control sequence. l.12502 unless \code {drop = TRUE}. ! Undefined control sequence. l.12504 The \code {[[} method supports argument \code{exact}. ! Undefined control sequence. l.12504 ...code{[[} method supports argument \code {exact}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12505 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12507 \begin{Value} ! Undefined control sequence. l.12508 ...or with the same set of levels as \code {x} unless \code{drop = TR... ! Undefined control sequence. l.12508 ... set of levels as \code{x} unless \code {drop = TRUE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12509 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12511 \begin{SeeAlso} \relax ! Undefined control sequence. l.12512 \code {\LinkA{factor}{factor}}, \code{\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12512 \code{\LinkA {factor}{factor}}, \code{\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12512 \code{\LinkA{factor}{factor}}, \code {\LinkA{Extract}{Extract}}. ! Undefined control sequence. l.12512 ...e{\LinkA{factor}{factor}}, \code{\LinkA {Extract}{Extract}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12513 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12515 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12516 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12517 # # following example(factor) ! You can't use `macro parameter character #' in horizontal mode. l.12517 ## following example(factor) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12521 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12522 \end{Examples} ! Undefine [92d control sequence. l.12523 \HeaderA {Extremes}{Maxima and Minima}{Extremes} ! Undefined control sequence. l.12524 \aliasA {max}{Extremes}{max} ! Undefined control sequence. l.12525 \aliasA {min}{Extremes}{min} ! Undefined control sequence. l.12526 \aliasA {pmax}{Extremes}{pmax} ! Undefined control sequence. l.12527 \methaliasA {pmax.int}{Extremes}{pmax.int} ! Undefined control sequence. l.12528 \aliasA {pmin}{Extremes}{pmin} ! Undefined control sequence. l.12529 \methaliasA {pmin.int}{Extremes}{pmin.int} ! Undefined control sequence. l.12530 \keyword {univar}{Extremes} ! Undefined control sequence. l.12531 \keyword {arith}{Extremes} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12533 \begin{Description} \relax ! Undefined control sequence. l.12534 Returns the (regular or \bold {p}arallel) maxima and minima of the ! Undefined control sequence. l.12537 \code {pmax*()} and \code{pmin*()} take one or more vectors as ! Undefined control sequence. l.12537 \code{pmax*()} and \code {pmin*()} take one or more vectors as ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12541 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12543 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12554 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12556 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12557 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12558 \item[\code{...}] numeric or character arguments (see Note). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12559 \item[\code{na.rm}] a logical indicating whether missing values shou... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12561 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See ]the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12562 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12564 \begin{Details} \relax ! Undefined control sequence. l.12565 \code {max} and \code{min} return the maximum or minimum of \emph{all} ! Undefined control sequence. l.12565 \code{max} and \code {min} return the maximum or minimum of \emph{all} ! Undefined control sequence. l.12566 ...es present in their arguments, as \code {\LinkA{integer}{integer}} if ! Undefined control sequence. l.12566 ...ent in their arguments, as \code{\LinkA {integer}{integer}} if ! Undefined control sequence. l.12567 all are \code {logical} or \code{integer}, as \code{\LinkA{double}{do... ! Undefined control sequence. l.12567 all are \code{logical} or \code {integer}, as \code{\LinkA{double}{do... ! Undefined control sequence. l.12567 ...de{logical} or \code{integer}, as \code {\LinkA{double}{double}} if ! Undefined control sequence. l.12567 ...cal} or \code{integer}, as \code{\LinkA {double}{double}} if ! Undefined control sequence. l.12570 If \code {na.rm} is \code{FALSE} an \code{NA} value in any of the ! Undefined control sequence. l.12570 If \code{na.rm} is \code {FALSE} an \code{NA} value in any of the ! Undefined control sequence. l.12570 If \code{na.rm} is \code{FALSE} an \code {NA} value in any of the ! Undefined control sequence. l.12571 arguments will cause a value of \code {NA} to be returned, otherwise ! Undefined control sequence. l.12572 \code {NA} values are ignored. ! Undefined control sequence. l.12574 ...aximum of a numeric empty set are \code {+Inf} and ! Undefined control sequence. l.12575 \code {-Inf} (in this order!) which ensures \emph{transitivity}, e.g., ! Undefined control sequence. l.12576 \code {min(x1, min(x2)) == min(x1, x2)}. For numeric \code{x} ! Undefined control sequence. l.12576 ...2)) == min(x1, x2)}. For numeric \code {x} ! Undefined control sequence. l.12577 \code {max(x) == -Inf} and \code{min(x) == +Inf} ! Undefined control sequence. l.12577 \code{max(x) == -Inf} and \code {min(x) == +Inf} ! Undefined control sequence. l.12578 whenever \code {length(x) == 0} (after removing missing values if ! Undefined control sequence. l.12579 requested). However, \code {pmax} and \code{pmin} return ! Undefined control sequence. l.12579 ...ested). However, \code{pmax} and \code {pmin} return ! Undefined control sequence. l.12580 \code {NA} if all the parallel elements are \code{NA} even for ! Undefined control sequence. l.12580 ... if all the parallel elements are \code {NA} even for ! Undefined control sequence. l.12581 \code {na.rm = TRUE}. ! Undefined control sequence. l.12583 \code {pmax} and \code{pmin} take one or more vectors (or matrices) as ! Undefined control sequence. l.12583 \code{pmax} and \code {pmin} take one or more vectors (or matrices) as ! Undefined control sequence. l.12590 \code {\LinkA{attributes}{attributes}}: such as \code{\LinkA{names}{n... ! Undefined control sequence. l.12590 \code{\LinkA {attributes}{attributes}}: such as \code{\LinkA{names}{n... ! Undefined control sequence. l.12590 ...attributes}{attributes}}: such as \code {\LinkA{names}{names}} or ! Undefined control sequence. l.12590 ...tes}{attributes}}: such as \code{\LinkA {names}{names}} or ! Undefined control sequence. l.12591 \code {\LinkA{dim}{dim}}) are copied from the first argument (if appl... ! Undefined control sequence. l.12591 \code{\LinkA {dim}{dim}}) are copied from the first argument (if appl... ! Undefined control sequence. l.12592 e.g., \emph{not} for an \code {S4} object). [125] [93 ! Undefined control sequence. l.12594 \code {pmax.int} and \code{pmin.int} are faster internal versions only ! Undefined control sequence. l.12594 \code{pmax.int} and \code {pmin.int} are faster internal versions only ! Undefined control sequence. l.12599 \code {max} and \code{min} are generic functions: methods can be ! Undefined control sequence. l.12599 \code{max} and \code {min} are generic functions: methods can be ! Undefined control sequence. l.12601 \code {\LinkA{Summary}{S3groupGeneric}} group generic. For this to ! Undefined control sequence. l.12601 \code{\LinkA {Summary}{S3groupGeneric}} group generic. For this to ! Undefined control sequence. l.12602 work properly, the arguments \code {...} should be unnamed, and ! Undefined control sequence. l.12605 ...of a numeric vector containing an \code {NaN} ! Undefined control sequence. l.12606 is \code {NaN}, except that the min/max of any vector containing an ! Undefined control sequence. l.12607 \code {NA} is \code{NA} even if it also contains an \code{NaN}. ! Undefined control sequence. l.12607 \code{NA} is \code {NA} even if it also contains an \code{NaN}. ! Undefined control sequence. l.12607 ...e{NA} even if it also contains an \code {NaN}. ! Undefined control sequence. l.12608 Note that \code {max(NA, Inf) == NA} even though the maximum would be ! Undefined control sequence. l.12609 \code {Inf} whatever the missing value actually is. ! Undefined control sequence. l.12613 `\LinkA {Comparison}{Comparison}' gives details. The max/min of an e... ! Undefined control sequence. l.12614 ...vector is defined to be character \code {NA}. (One could ! Undefined control sequence. l.12615 argue that as \code {""} is the smallest character element, the maximum ! Undefined control sequence. l.12616 should be \code {""}, but there is no obvious candidate for the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12618 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12620 \begin{Value} ! Undefined control sequence. l.12621 For \code {min} or \code{max}, a length-one vector. For \code{pmin} or ! Undefined control sequence. l.12621 For \code{min} or \code {max}, a length-one vector. For \code{pmin} or ! Undefined control sequence. l.12621 ...e{max}, a length-one vector. For \code {pmin} or ! Undefined control sequence. l.12622 \code {pmax}, a vector of length the longest of the input vectors, or ! Undefined control sequence. l.12628 For \code {min} and \code{max} if there are only numeric inputs and all ! Undefined control sequence. l.12628 For \code{min} and \code {max} if there are only numeric inputs and all ! Undefined control sequence. l.12629 are empty (after possible removal of \code {NA}s), the result is double ! Undefined control sequence. l.12630 (\code {Inf} or \code{-Inf}). ! Undefined control sequence. l.12630 (\code{Inf} or \code {-Inf}). ! LaTeX Error: \begin{document} ended by \end{Value}. See ]the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12631 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12633 \begin{Section} {S4 methods} ! Undefined control sequence. l.12634 \code {max} and \code{min} are part of the S4 ! Undefined control sequence. l.12634 \code{max} and \code {min} are part of the S4 ! Undefined control sequence. l.12635 \code {\LinkA{Summary}{S4groupGeneric}} group generic. Methods ! Undefined control sequence. l.12635 \code{\LinkA {Summary}{S4groupGeneric}} group generic. Methods ! Undefined control sequence. l.12636 for them must use the signature \code {x, ..., na.rm}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12637 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12639 \begin{Note} \relax ! Undefined control sequence. l.12641 ...nteger). For historical reasons, \code {NULL} ! Undefined control sequence. l.12642 is accepted as equivalent to \code {integer(0)}. ! Undefined control sequence. l.12644 \code {pmax} and \code{pmin} will also work on classed S3 or S4 objects ! Undefined control sequence. l.12644 \code{pmax} and \code {pmin} will also work on classed S3 or S4 objects ! Undefined control sequence. l.12645 ...propriate methods for comparison, \code {is.na} and \code{rep} ! Undefined control sequence. l.12645 ... for comparison, \code{is.na} and \code {rep} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12647 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12649 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12653 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12655 \begin{SeeAlso} \relax ! Undefined control sequence. l.12656 \code {\LinkA{range}{range}} (\emph{both} min and max) and ! Undefined control sequence. l.12656 \code{\LinkA {range}{range}} (\emph{both} min and max) and ! Undefined control sequence. l.12657 \code {\LinkA{which.min}{which.min}} (\code{which.max}) for the \emph... ! Undefined control sequence. l.12657 \code{\LinkA {which.min}{which.min}} (\code{which.max}) for the \emph... ! Undefined control sequence. l.12657 \code{\LinkA{which.min}{which.min}} (\code {which.max}) for the \emph... ! Undefined control sequence. l.12660 `\LinkA {plotmath}{plotmath}' for the use of \code{min} in plot annot... ! Undefined control sequence. l.12660 ...otmath}{plotmath}' for the use of \code {min} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12661 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12663 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12664 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12666 min(5:1, pi) # -> one number ! You can't use `macro parameter character #' in horizontal mode. l.12667 pmin(5:1, pi) # -> 5 numbers ! You can't use `macro parameter character #' in horizontal mode. l.12670 pmin(cH, quantile(x)) # no names ! You can't use `macro parameter character #' in horizontal mode. l.12671 pmin(quantile(x), cH) # has names Underfull \hbox (badness 1383) in paragraph at lines 12669--12673 []\OT1/cmr/m/n/10 x <- sort(rnorm(100)); cH <- 1.35 pmin(cH, quan-tile(x)) no names ! Missing $ inserted. $ l.12675 curve( x^ 2 - 1/4, -1.4, 1.5, col = 2) ! You can't use `macro parameter character #' in math mode. l.12677 # # pmax(), pmin() preserve attributes of *first* argument ! You can't use `macro parameter character #' in math mode. l.12677 ## pmax(), pmin() preserve attributes of *first* argument ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12684 \end{ExampleCode} ! Missing $ inserted. $ l.12684 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12685 \end{Examples} ! Undefined control sequence. l.12686 \HeaderA {extSoftVersion}{Report Versions of Third-Party Software}{ex... ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12688 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12690 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12692 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 12674--12693 []\OT1/cmr/m/n/10 cut01 <- func-tion(x) pmax(pmin(x, 1), 0) curve( x$[] \OMS/cm sy/m/n/10 ^^@ Underfull \hbox (badness 5862) in paragraph at lines 12674--12693 \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 =\OT1/cmr/m/n/10 4\OML/cmm/m/it/10 ; \OMS/cms y/m/n/10 ^^@\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 4\OML/cmm/m/it/1 0 ; \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 5\OML/cmm/m/it/10 ; col \OT1/cmr/m/n/10 = 2)\OML/cmm/m/it/10 curve\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 cut \OT1/cmr/m/n/10 01(\OML/cmm/m/it/10 x[] \OMS/cmsy/m/n/10 ^^@ \OT1/cmr/m/n/10 1\ OML/cmm/m/it/10 =\OT1/cmr/m/n/10 4)\OML/cmm/m/it/10 ; col \OT1/cmr/m/n/10 = "\O ML/cmm/m/it/10 blue\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; add \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 12674--12693 \OML/cmm/m/it/10 TRUE; n \OT1/cmr/m/n/10 = 500)\OML/cmm/m/it/10 pmax\OT1/cmr/m/ n/10 ()\OML/cmm/m/it/10 ; pmin\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 preserveattrib utesof \OMS/cmsy/m/n/10 ^^C Underfull \hbox (badness 10000) in paragraph at lines 12674--12693 \OML/cmm/m/it/10 first \OMS/cmsy/m/n/10 ^^C \OML/cmm/m/it/10 argumentD < \OMS/c msy/m/n/10 ^^@\OML/cmm/m/it/10 diag\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x \OT1/cmr /m/n/10 = (3 : 1)\OML/cmm/m/it/10 =\OT1/cmr/m/n/10 4); \OML/cmm/m/it/10 n\OT1/c mr/m/n/10 0 \OML/cmm/m/it/10 < Overfull \hbox (194.55147pt too wide) in paragraph at lines 12674--12693 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 numeric\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 stopifnot\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 identical\OT1/cmr/m/n/10 (\OML/cmm/m /it/10 D; cut\OT1/cmr/m/n/10 01(\OML/cmm/m/it/10 D\OT1/cmr/m/n/10 ))\OML/cmm/m/ it/10 ; identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 0\OML/cmm/m /it/10 ; cut\OT1/cmr/m/n/10 01(\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 0))\OML/cmm/m/ it/10 ; identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 0\OML/cmm/m /it/10 ; cut\OT1/cmr/m/n/10 01(\OML/cmm/m/it/10 NULL\OT1/cmr/m/n/10 ))\OML/cmm/ m/it/10 ; identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 0\OML/cmm /m/it/10 ; pmax\OT1/cmr/m/n/10 (3 : [126 Underfull \hbox (badness 10000) in paragraph at lines 8057--8066 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [94]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12696 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12698 \begin{Details} \relax ! Undefined control sequence. l.12700 ...al but might have been compiled into \R {} when it ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12705 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12707 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12709 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12710 \item[\code{zlib}] The version of \code{zlib} in use. ! Undefined control sequence. l.12710 \item[\code{zlib}] The version of \code {zlib} in use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12711 \item[\code{bzlib}] The version of \code{bzlib} (from \command{bzip2... ! Undefined control sequence. l.12711 \item[\code{bzlib}] The version of \code {bzlib} (from \command{bzip2... ! Undefined control sequence. l.12711 ... version of \code{bzlib} (from \command {bzip2}) in use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12712 \item[\code{xz}] The version of \code{liblzma} (from \command{xz}) i... ! Undefined control sequence. l.12712 \item[\code{xz}] The version of \code {liblzma} (from \command{xz}) i... ! Undefined control sequence. l.12712 ...ersion of \code{liblzma} (from \command {xz}) in use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12713 \item[\code{PCRE}] The version of \code{PCRE} in use. ! Undefined control sequence. l.12713 \item[\code{PCRE}] The version of \code {PCRE} in use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12714 \item[\code{ICU}] The version of \code{ICU} in use (if any, otherwis... ! Undefined control sequence. l.12714 \item[\code{ICU}] The version of \code {ICU} in use (if any, otherwis... ! Undefined control sequence. l.12714 ...de{ICU} in use (if any, otherwise \code {""}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12715 \item[\code{TRE}] The version of \code{libtre} in use. ! Undefined control sequence. l.12715 \item[\code{TRE}] The version of \code {libtre} in use. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12716 \item[\code{iconv}] The implementation and version of the \code{iconv} ! Undefined control sequence. l.12716 ...implementation and version of the \code {iconv} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12718 \item[\code{readline}] The version of \code{readline} in use (if any, ! Undefined control sequence. l.12718 ...m[\code{readline}] The version of \code {readline} in use (if any, ! Undefined control sequence. l.12719 otherwise \code {""}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12720 \item[\code{BLAS}] Name of the binary/executable file with the imple... ! Undefined control sequence. l.12721 \code {BLAS} in use (if known, otherwise \code{""}). ! Undefined control sequence. l.12721 ...BLAS} in use (if known, otherwise \code {""}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12723 \end{ldescription} ! Undefined control sequence. l.12724 Note that the values for \code {bzlib} and \code{pcre} normally contain ! Undefined control sequence. l.12724 ...t the values for \code{bzlib} and \code {pcre} normally contain ! Undefined control sequence. l.12725 ... the version number, and that for \code {tre} includes ! Undefined control sequence. l.12729 For \code {iconv} this will give the implementation as well as the ! Undefined control sequence. l.12730 version, for example \code {"GNU libiconv 1.14"}, \code{"glibc ! Undefined control sequence. l.12730 ...ample \code{"GNU libiconv 1.14"}, \code {"glibc ! Undefined control sequence. l.12731 2.18"} or \code {"win\_iconv"} (which has no version number). ! Undefined control sequence. l.12733 ...of the binary/executable file for \code {BLAS} can be used as an ! Undefined control sequence. l.12735 BLAS will appear as \code {libR.so} (\code{libR.dylib}), \code{R} or ! Undefined control sequence. l.12735 BLAS will appear as \code{libR.so} (\code {libR.dylib}), \code{R} or ! Undefined control sequence. l.12735 ...ode{libR.so} (\code{libR.dylib}), \code {R} or ! Undefined control sequence. l.12736 \code {libRblas.so} (\code{libRblas.dylib}), depending on how R was b... ! Undefined control sequence. l.12736 \code{libRblas.so} (\code {libRblas.dylib}), depending on how R was b... ! Undefined control sequence. l.12737 Note that \code {libRblas.so} (\code{libRblas.dylib}) may also be sho... ! Undefined control sequence. l.12737 Note that \code{libRblas.so} (\code {libRblas.dylib}) may also be sho... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12742 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12744 \begin{SeeAlso} \relax ! Undefined control sequence. l.12745 \code {\LinkA{libcurlVersion}{libcurlVersion}} for the version of \co... ! Undefined control sequence. l.12745 \code{\LinkA {libcurlVersion}{libcurlVersion}} for the version of \co... ! Undefined control sequence. l.12745 ...bcurlVersion}} for the version of \code {libCurl}. ! Undefined control sequence. l.12747 \code {\LinkA{La\_version}{La.Rul.version}} for the version of LAPACK... ! Undefined control sequence. l.12747 \code{\LinkA {La\_version}{La.Rul.version}} for the version of LAPACK... ! Undefined control sequence. l.12749 \code {\LinkA{La\_library}{La.Rul.library}} for binary/executable fil... ! Undefined control sequence. l.12749 \code{\LinkA {La\_library}{La.Rul.library}} for binary/executable fil... ! Undefined control sequence. l.12751 \code {\LinkA{grSoftVersion}{grSoftVersion}} for third-party graphics... ! Undefined control sequence. l.12751 \code{\LinkA {grSoftVersion}{grSoftVersion}} for third-party graphics... ! Undefined control sequence. l.12753 \code {\LinkA{tclVersion}{tclVersion}} for the version of Tcl/Tk. ! Undefined control sequence. l.12753 \code{\LinkA {tclVersion}{tclVersion}} for the version of Tcl/Tk. ! Undefined control sequence. l.12755 \code {\LinkA{pcre\_config}{pcre.Rul.config}} for PCRE configuration ... ! Undefined control sequence. l.12755 \code{\LinkA {pcre\_config}{pcre.Rul.config}} for PCRE configuration ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12756 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12758 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for [95 immediate help. ... l.12759 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12761 # # the PCRE version ! You can't use `macro parameter character #' in horizontal mode. l.12761 ## the PCRE version ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12763 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12764 \end{Examples} ! Undefined control sequence. l.12765 \HeaderA {factor}{Factors}{factor} ! Undefined control sequence. l.12766 \aliasA {.valid.factor}{factor}{.valid.factor} ! Undefined control sequence. l.12767 \aliasA {addNA}{factor}{addNA} ! Undefined control sequence. l.12768 \aliasA {as.factor}{factor}{as.factor} ! Undefined control sequence. l.12769 \aliasA {as.ordered}{factor}{as.ordered} ! Undefined control sequence. l.12770 \aliasA {is.factor}{factor}{is.factor} ! Undefined control sequence. l.12771 \aliasA {is.na<\Rdash{}.factor}{factor}{is.na<.Rdash..factor} ! Undefined control sequence. l.12771 \aliasA{is.na<\Rdash {}.factor}{factor}{is.na<.Rdash..factor} ! Undefined control sequence. l.12772 \aliasA {is.ordered}{factor}{is.ordered} ! Undefined control sequence. l.12773 \aliasA {Math.factor}{factor}{Math.factor} ! Undefined control sequence. l.12774 \aliasA {Ops.factor}{factor}{Ops.factor} ! Undefined control sequence. l.12775 \aliasA {Ops.ordered}{factor}{Ops.ordered} ! Undefined control sequence. l.12776 \aliasA {ordered}{factor}{ordered} ! Undefined control sequence. l.12777 \aliasA {Summary.factor}{factor}{Summary.factor} ! Undefined control sequence. l.12778 \aliasA {Summary.ordered}{factor}{Summary.ordered} ! Undefined control sequence. l.12779 \keyword {category}{factor} ! Undefined control sequence. l.12780 \keyword {NA}{factor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12782 \begin{Description} \relax ! Undefined control sequence. l.12783 The function \code {factor} is used to encode a vector as a factor (the ! Undefined control sequence. l.12785 factors). If argument \code {ordered} is \code{TRUE}, the factor ! Undefined control sequence. l.12785 ...). If argument \code{ordered} is \code {TRUE}, the factor ! Undefined control sequence. l.12787 also a function \code {ordered}. Underfull \hbox (badness 1430) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 Ver-sion() the PCRE ver-sion sub(" .*", "", extSoft-Ver-sion() ["PCRE"]) Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 fac-tor-Fac-tors-fac-tor .valid.factorfactor.valid.factor addNA fac-toraddNA Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 as.factorfactoras.factor as.orderedfactoras.ordered is.factorfa ctoris.factor Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 is.na<.factorfactoris.na<.Rdash..factor is.orderedfactoris.orde red Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 Math.factorfactorMath.factor Ops.factorfactorOps.factor Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 Ops.orderedfactorOps.ordered or-dered-fac-torordered Sum- Underfull \hbox (badness 10000) in paragraph at lines 12755--12788 \OT1/cmr/m/n/10 mary.factorfactorSummary.factor Sum-mary.orderedfactorSummary.o rdered [127]] ! Undefined control sequence. l.12789 \code {is.factor}, \code{is.ordered}, \code{as.factor} and \code{as.o... ! Undefined control sequence. l.12789 \code{is.factor}, \code {is.ordered}, \code{as.factor} and \code{as.o... ! Undefined control sequence. l.12789 \code{is.factor}, \code{is.ordered}, \code {as.factor} and \code{as.o... ! Undefined control sequence. l.12789 ...is.ordered}, \code{as.factor} and \code {as.ordered} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12791 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12793 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12808 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12810 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12811 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12812 \item[\code{x}] a vector of data, usually taking a small number of d... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12814 \item[\code{levels}] an optional vector of the values (as character ... ! Undefined control sequence. l.12815 that \code {x} might have taken. The default is the unique set of ! Undefined control sequence. l.12816 values taken by \code {\LinkA{as.character}{as.character}(x)}, sorted... ! Undefined control sequence. l.12816 values taken by \code{\LinkA {as.character}{as.character}(x)}, sorted... ! Undefined control sequence. of \code {x} l.12817 increasing order \emph{of \code{x}} . Note that this set can be ! Undefined control sequence. l.12818 specified as smaller than \code {sort(unique(x))}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12819 \item[\code{labels}] \emph{either} an optional character vector of (... ! Undefined control sequence. l.12820 ... the levels (in the same order as \code {levels} after ! Undefined control sequence. [96 l.12821 removing those in \code {exclude}), \emph{or} a character string of ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12823 \item[\code{exclude}] a vector of values to be excluded when forming... ! Undefined control sequence. l.12824 ...factor with the same level set as \code {x} ! Undefined control sequence. l.12825 or should be a \code {character}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12826 \item[\code{ordered}] logical flag to determine if the levels should... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12828 \item[\code{nmax}] an upper bound on the number of levels; see `Deta... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12829 \item[\code{...}] (in \code{ordered(.)}): any of the above, apart from ! Undefined control sequence. l.12829 \item[\code{...}] (in \code {ordered(.)}): any of the above, apart from ! Undefined control sequence. l.12830 \code {ordered} itself. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12831 \item[\code{ifany}] (only add an \code{NA} level if it is used, i.e. ! Undefined control sequence. l.12831 \item[\code{ifany}] (only add an \code {NA} level if it is used, i.e. ! Undefined control sequence. l.12832 if \code {any(is.na(x))}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12833 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12834 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12836 \begin{Details} \relax ! Undefined control sequence. l.12837 The type of the vector \code {x} is not restricted; it only must have ! Undefined control sequence. l.12838 an \code {\LinkA{as.character}{as.character}} method and be sortable (by ! Undefined control sequence. l.12838 an \code{\LinkA {as.character}{as.character}} method and be sortable (by ! Undefined control sequence. l.12839 \code {\LinkA{sort.list}{sort.list}}). ! Undefined control sequence. l.12839 \code{\LinkA {sort.list}{sort.list}}). ! Undefined control sequence. l.12845 in \code {exclude} are removed from \code{levels}. If \code{x[i]} ! Undefined control sequence. l.12845 in \code{exclude} are removed from \code {levels}. If \code{x[i]} ! Undefined control sequence. l.12845 ...re removed from \code{levels}. If \code {x[i]} ! Undefined control sequence. l.12846 equals \code {levels[j]}, then the \code{i}-th element of the result is ! Undefined control sequence. l.12846 equals \code{levels[j]}, then the \code {i}-th element of the result is ! Undefined control sequence. l.12847 \code {j}. If no match is found for \code{x[i]} in \code{levels} ! Undefined control sequence. l.12847 \code{j}. If no match is found for \code {x[i]} in \code{levels} ! Undefined control sequence. l.12847 ...match is found for \code{x[i]} in \code {levels} ! Undefined control sequence. l.12848 ...pen for excluded values) then the \code {i}-th element ! Undefined control sequence. l.12849 of the result is set to \code {\LinkA{NA}{NA}}. ! Undefined control sequence. l.12849 of the result is set to \code{\LinkA {NA}{NA}}. ! Undefined control sequence. l.12852 ...of levels after removing those in \code {exclude}, but ! Undefined control sequence. l.12853 this can be altered by supplying \code {labels}. This should either ! Undefined control sequence. l.12858 \code {factor(x, exclude = NULL)} applied to a factor without ! Undefined control sequence. l.12859 \code {\LinkA{NA}{NA}}s is a no-operation unless there are unused lev... ! Undefined control sequence. l.12859 \code{\LinkA {NA}{NA}}s is a no-operation unless there are unused lev... ! Undefined control sequence. l.12861 \code {exclude} is used, since \R{} version 3.4.0, excluding non-exis... ! Undefined control sequence. l.12861 \code{exclude} is used, since \R {} version 3.4.0, excluding non-exis... ! Undefined control sequence. l.12863 \code {exclude} is a \code{\LinkA{character}{character}} vector, that... ! Undefined control sequence. l.12863 \code{exclude} is a \code {\LinkA{character}{character}} vector, that... ! Undefined control sequence. l.12863 \code{exclude} is a \code{\LinkA {character}{character}} vector, that... ! Undefined control sequence. l.12864 applied to the levels of \code {x}. ! Undefined control sequence. l.12865 Alternatively, \code {exclude} can be factor with the same level set as ! Undefined control sequence. l.12866 \code {x} and will exclude the levels present in \code{exclude}. ! Undefined control sequence. l.12866 ...ill exclude the levels present in \code {exclude}. [128]] ! Undefined control sequence. l.12868 The codes of a factor may contain \code {\LinkA{NA}{NA}}. For a numeric ! Undefined control sequence. l.12868 ...es of a factor may contain \code{\LinkA {NA}{NA}}. For a numeric ! Undefined control sequence. l.12869 \code {x}, set \code{exclude = NULL} to make \code{\LinkA{NA}{NA}} an... ! Undefined control sequence. l.12869 \code{x}, set \code {exclude = NULL} to make \code{\LinkA{NA}{NA}} an... ! Undefined control sequence. l.12869 ...set \code{exclude = NULL} to make \code {\LinkA{NA}{NA}} an extra ! Undefined control sequence. l.12869 ...de{exclude = NULL} to make \code{\LinkA {NA}{NA}} an extra ! Undefined control sequence. l.12870 level (prints as \code {}); by default, this is the last level. ! Undefined control sequence. l.12872 If \code {NA} is a level, the way to set a code to be missing (as ! Undefined control sequence. l.12874 use \code {\LinkA{is.na}{is.na}} on the left-hand-side of an assignme... ! Undefined control sequence. l.12874 use \code{\LinkA {is.na}{is.na}} on the left-hand-side of an assignme... ! Undefined control sequence. l.12875 \code {is.na(f)[i] <- TRUE}; indexing inside \code{is.na} does not wo... ! Undefined control sequence. l.12875 ...a(f)[i] <- TRUE}; indexing inside \code {is.na} does not work). ! Undefined control sequence. l.12877 \code {}, i.e., identical to entries of level \code{NA}. ! Undefined control sequence. l.12877 ...e., identical to entries of level \code {NA}. ! Undefined control sequence. l.12879 \code {is.factor} is generic: you can write methods to handle ! Undefined control sequence. l.12880 specific classes of objects, see \LinkA {InternalMethods}{InternalMet... ! Undefined control sequence. l.12882 Where \code {levels} is not supplied, \code{\LinkA{unique}{unique}} i... ! Undefined control sequence. l.12882 Where \code{levels} is not supplied, \code {\LinkA{unique}{unique}} i... ! Undefined control sequence. l.12882 ...e{levels} is not supplied, \code{\LinkA {unique}{unique}} is called. ! Undefined control sequence. l.12884 vectors \code {x} it is helpful to supply \code{nmax} as an upper bound ! Undefined control sequence. l.12884 ... \code{x} it is helpful to supply \code {nmax} as an upper bound ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12886 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12888 \begin{Value} ! Undefined control sequence. l.12889 \code {factor} returns an object of class \code{"factor"} which has a ! Undefined control sequence. l.12889 ...actor} returns an object of class \code {"factor"} which has a ! Undefined control sequence. l.12890 set of integer codes the length of \code {x} with a \code{"levels"} ! Undefined control sequence. l.12890 ...des the length of \code{x} with a \code {"levels"} ! Undefined control sequence. l.12891 attribute of mode \code {\LinkA{character}{character}} and unique ! Undefined control sequence. l.12891 attribute of mode \code{\LinkA {character}{character}} and unique ! Undefined control sequence. l.12892 (\code {!\LinkA{anyDuplicated}{anyDuplicated}(.)}) entries. If argum... ! Undefined control sequence. l.12892 (\code{!\LinkA {anyDuplicated}{anyDuplicated}(.)}) entries. If argum... ! Undefined control sequence. l.12892 ...cated}(.)}) entries. If argument \code {ordered} ! Undefined control sequence. l.12893 is true (or \code {ordered()} is used) the result has class ! Undefined control sequence. l.12894 \code {c("ordered", "factor")}. ! Undefined control sequence. l.12895 Undocumentedly for a long time, \code {factor(x)} loses all ! Undefined control sequence. l.12896 \code {\LinkA{attributes}{attributes}(x)} but \code{"names"}, and resets ! Undefined control sequence. l.12896 \code{\LinkA {attributes}{attributes}(x)} but \code{"names"}, and resets ! Undefined control sequence. l.12896 ...A{attributes}{attributes}(x)} but \code {"names"}, and resets ! Undefined control sequence. l.12897 \code {"levels"} and \code{"class"}. ! Undefined control sequence. l.12897 \code{"levels"} and \code {"class"}. ! Undefined control sequence. l.12899 Applying \code {factor} to an ordered or unordered factor returns a ! Undefined control sequence. l.12901 \code {\LinkA{[.factor}{[.factor}} for a more transparent way to achi... ! Undefined control sequence. l.12901 \code{\LinkA {[.factor}{[.factor}} for a more transparent way to achi... ! Undefined control sequence. l.12903 \code {is.factor} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.12903 \code{is.factor} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.12903 ...is.factor} returns \code{TRUE} or \code {FALSE} depending on ! Undefined control sequence. l.12905 \code {is.ordered} returns \code{TRUE} when its argument is an ordered ! Undefined control sequence. l.12905 \code{is.ordered} returns \code {TRUE} when its argument is an ordered ! Undefined control sequence. l.12906 factor and \code {FALSE} otherwise. ! Undefined control sequence. l.12908 \code {as.factor} coerces its argument to a factor. ! Undefined control sequence. l.12909 ...viated (sometimes faster) form of \code {factor}. ! Undefined control sequence. l.12911 \code {as.ordered(x)} returns \code{x} if this is ordered, and ! Undefined control sequence. l.12911 \code{as.ordered(x)} returns \code {x} if this is ordered, and ! Undefined control sequence. l.12912 \code {ordered(x)} otherwise. ! Undefined control sequence. l.12914 \code {addNA} modifies a factor by turning \code{NA} into an extra ! Undefined control sequence. l.12914 ...dNA} modifies a factor by turning \code {NA} into an extra ! Undefined control sequence. l.12915 level (so that \code {NA} values are counted in tables, for instance). ! Undefined control sequence. l.12917 \code {.valid.factor(object)} checks the validity of a factor, ! Undefined control sequence. l.12918 currently only \code {levels(object)}, and returns \code{TRUE} if it is ! Undefined control sequence. l.12918 ...code{levels(object)}, and returns \code {TRUE} if it is ! Undefined control sequence. l.12920 function is used for \code {\LinkA{validObject}{validObject}()}. ! Undefined control sequence. l.12920 function is used for \code{\LinkA {validObject}{validObject}()}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12921 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12923 \begin{Section} {Warning} ! Undefined control sequence. l.12925 \code {"levels"} attribute. Be careful only to compare factors with ! Undefined control sequence. l.12927 \code {as.numeric} applied to a factor is meaningless, and may ! Undefined control sequence. l.12928 ... coercion. To transform a factor \code {f} to ! Undefined control sequence. l.12930 \code {as.numeric(levels(f))[f]} is recommended and slightly more ! Undefined control sequence. l.12931 efficient than \code {as.numeric(as.character(f))}. ! Undefined control sequence. l.12938 \code {NA} as a level. It is suggested to use them sparingly, e.g., ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12940 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12942 \begin{Section} {Comparison operators and group generic methods} ! Undefined control sequence. l.12943 There are \code {"factor"} and \code{"ordered"} methods for the ! Undefined control sequence. l.12943 There are \code{"factor"} and \code {"ordered"} methods for the ! Undefined control sequence. l.12944 \LinkA {group generic}{group generic} \code{\LinkA{Ops}{S3groupGeneri... ! Undefined control sequence. l.12944 \LinkA{group generic}{group generic} \code {\LinkA{Ops}{S3groupGeneri... ! Undefined control sequence. l.12944 ...up generic}{group generic} \code{\LinkA {Ops}{S3groupGeneric}} which ! Undefined control sequence. l.12945 provide methods for the \LinkA {Comparison}{Comparison} operators, ! Undefined control sequence. l.12946 and for the \code {\LinkA{min}{min}}, \code{\LinkA{max}{max}}, and ! Undefined control sequence. l.12946 and for the \code{\LinkA {min}{min}}, \code{\LinkA{max}{max}}, and ! Undefined control sequence. l.12946 and for the \code{\LinkA{min}{min}}, \code {\LinkA{max}{max}}, and ! Undefined control sequence. l.12946 ...e \code{\LinkA{min}{min}}, \code{\LinkA {max}{max}}, and ! Undefined control sequence. l.12947 \code {\LinkA{range}{range}} generics in \code{\LinkA{Summary}{S3grou... ! Undefined control sequence. l.12947 \code{\LinkA {range}{range}} generics in \code{\LinkA{Summary}{S3grou... ! Undefined control sequence. l.12947 ...\LinkA Underfull \hbox (badness 10000) in paragraph at lines 8282--8288 []@texttt valgrind[] @textrm is good at spot-ting the use of unini-tial-ized va l-ues: use op-tion Underfull \hbox (badness 10000) in paragraph at lines 8321--8331 @textrm See [][]@texttt http://clang.llvm.org/docs/UsersManual.html#controlling -code-generation[][][]@textrm , Overfull \hbox (39.30319pt too wide) in paragraph at lines 8335--8336 [][][]@smallrm see [][]@smalltt http://llvm.org/devmtg/2014-04/PDFs/LightningTa lks/EuroLLVM%202014%20--%20container%20overflow.pdf[][][]@smallrm .| [97{range}{range}} generics in \code {\LinkA{Summary}{S3groupGe... ! Undefined control sequence. l.12947 ...range}{range}} generics in \code{\LinkA {Summary}{S3groupGeneric}} ! Undefined control sequence. l.12948 of \code {"ordered"}. (The rest of the groups and the ! Undefined control sequence. l.12949 \code {\LinkA{Math}{S3groupGeneric}} group generate an error as they ! Undefined control sequence. l.12949 \code{\LinkA {Math}{S3groupGeneric}} group generate an error as they [129> [71]]] ! Undefined control sequence. l.12952 Only \code {==} and \code{!=} can be used for factors: a factor can ! Undefined control sequence. l.12952 Only \code{==} and \code {!=} can be used for factors: a factor can ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12961 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12963 \begin{Note} \relax ! Undefined control sequence. l.12964 In earlier versions of \R {}, storing character data as a factor was ... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12970 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12972 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12976 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12978 \begin{SeeAlso} \relax ! Undefined control sequence. l.12979 \code {\LinkA{[.factor}{[.factor}} for subsetting of factors. ! Undefined control sequence. l.12979 \code{\LinkA {[.factor}{[.factor}} for subsetting of factors. ! Undefined control sequence. l.12981 \code {\LinkA{gl}{gl}} for construction of balanced factors and ! Undefined control sequence. l.12981 \code{\LinkA {gl}{gl}} for construction of balanced factors and ! Undefined control sequence. l.12982 \code {\LinkA{C}{C}} for factors with specified contrasts. ! Undefined control sequence. l.12982 \code{\LinkA {C}{C}} for factors with specified contrasts. ! Undefined control sequence. l.12983 \code {\LinkA{levels}{levels}} and \code{\LinkA{nlevels}{nlevels}} fo... ! Undefined control sequence. l.12983 \code{\LinkA {levels}{levels}} and \code{\LinkA{nlevels}{nlevels}} fo... ! Undefined control sequence. l.12983 \code{\LinkA{levels}{levels}} and \code {\LinkA{nlevels}{nlevels}} fo... ! Undefined control sequence. l.12983 ...LinkA{levels}{levels}} and \code{\LinkA {nlevels}{nlevels}} for ac... ! Undefined control sequence. l.12984 levels, and \code {\LinkA{unclass}{unclass}} to get integer codes. ! Undefined control sequence. l.12984 levels, and \code{\LinkA {unclass}{unclass}} to get integer codes. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12985 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12987 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12988 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.12990 as.integer(ff) # the internal codes ! You can't use `macro parameter character #' in horizontal mode. l.12991 (f. <- factor(ff)) # drops the levels that do not occur ! You can't use `macro parameter character #' in horizontal mode. l.12992 ff[, drop = TRUE] # the same, more transparently ! You can't use `macro parameter character #' in horizontal mode. l.12996 class(ordered(4:1)) # "ordered", inheriting from "factor" ! You can't use `macro parameter character #' in horizontal mode. l.12998 # # and "relational" methods work: ! You can't use `macro parameter character #' in horizontal mode. l.12998 ## and "relational" methods work: Underfull \hbox (badness 5460) in paragraph at lines 12996--13000 []\OT1/cmr/m/n/10 class(ordered(4:1)) "or-dered", in-her-it-ing from "fac-tor" z <- fac- Underfull \hbox (badness 1259) in paragraph at lines 12996--13000 \OT1/cmr/m/n/10 tor(LETTERS[3:1], or-dered = TRUE) and "re-la-tional" meth-ods work: ! You can't use `macro parameter character #' in vertical mode. l.13002 # # suppose you want "NA" as a level, and to allow missing values. ! You can't use `macro parameter character #' in vertical mode. l.13002 ## suppose you want "NA" as a level, and to allow missing values. ! You can't use `macro parameter character #' in horizontal mode. l.13005 x # [1] 1 ! You can't use `macro parameter character #' in horizontal mode. l.13007 # [1] FALSE TRUE FALSE ! You can't use `macro parameter character #' in vertical mode. l.13009 # # More rational, since R 3.4.0 : ! You can't use `macro parameter character #' in vertical mode. l.13009 ## More rational, since R 3.4.0 : ! You can't use `macro parameter character #' in horizontal mode. l.13010 factor(c(1:2, NA), exclude = "" ) # keeps , as ! You can't use `macro parameter character #' in horizontal mode. l.13011 factor(c(1:2, NA), exclude = NULL) # always did ! You can't use `macro parameter character #' in horizontal mode. l.13012 # # exclude = ! You can't use `macro parameter character #' in horizontal mode. l.13012 ## exclude = ! You can't use `macro parameter character #' in horizontal mode. l.13013 z # ordered levels 'A < B < C' ! You can't use `macro parameter character #' in horizontal mode. l.13014 factor(z, exclude = "C") # does exclude ! You can't use `macro parameter character #' in horizontal mode. l.13015 factor(z, exclude = "B") # ditto ! You can't use `macro parameter character #' in vertical mode. l.13017 # # Using addNA() ! You can't use `macro parameter character #' in vertical mode. l.13017 ## Using addNA() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13021 \end{ExampleCode} ! Missing $ inserted. $ l.13021 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by for immediate help. ... l.13022 \end{Examples} ! Undefined control sequence. l.13023 \HeaderA {file.access}{Ascertain File Accessibility}{file.access} ! Undefined control sequence. l.13024 \keyword {file}{file.access} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13026 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13029 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13031 \begin{Usage} Overfull \hbox (83.56264pt too wide) in paragraph at lines 13017--13032 []\OT1/cmr/m/n/10 Using addNA() Month <- airquality$\OML/cmm/m/it/10 Monthtable \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 addNA\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Month\ OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 table\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 addNA\ OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Month; ifany \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13035 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13037 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13038 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13039 \item[\code{names}] character vector containing file names. ! Undefined control sequence. l.13040 Tilde-expansion will be done: see \code {\LinkA{path.expand}{path.exp... ! Undefined control sequence. l.13040 ...xpansion will be done: see \code{\LinkA {path.expand}{path.expand}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13041 \item[\code{mode}] integer specifying access mode required: see `Det... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13042 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13043 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13045 \begin{Details} \relax ! Undefined control sequence. l.13046 The \code {mode} value can be the exclusive or of the following values [130 Underfull \hbox (badness 4913) in paragraph at lines 8364--8367 [][][]@smallrm installed on some Linux sys-tems as @smalltt asan_symbolize[]@sm allrm , and ob-tain-able from [][]@smalltt https://llvm.org/ Underfull \hbox (badness 10000) in paragraph at lines 8364--8367 @smalltt svn/llvm-project/compiler-rt/trunk/lib/asan/scripts/asan_symbolize.py[ ][][]@smallrm : it makes use of Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 []@textrm For op-tions avail-able @textit via @textrm the en-vi-ron-ment vari-a ble @texttt ASAN_OPTIONS[] @textrm see Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 [][]@texttt https://code.google.com/p/address-sanitizer/wiki/AddressSanitizerFL ags[][][]@textrm . Underfull \hbox (badness 10000) in paragraph at lines 8419--8423 []@textrm Recent ver-sions$[]$ added the flag `@texttt -fsanitize-address-use-a fter-scope[]@textrm '[]: see [98]] ! Undefined control sequence. l.13062 you call \code {file.access()} and the time you try to open the file. ! Undefined control sequence. l.13063 ...ter to wrap file open attempts in \code {\LinkA{try}{try}}. ! Undefined control sequence. l.13063 ...wrap file open attempts in \code{\LinkA {try}{try}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13064 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13066 \begin{Value} ! Undefined control sequence. l.13067 An integer vector with values \code {0} for success and \code{-1} for... ! Undefined control sequence. l.13067 ...h values \code{0} for success and \code {-1} for failure. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13068 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13070 \begin{Note} \relax ! Undefined control sequence. l.13072 \code {access}, a wrapper for the C function of the same name, which ! Undefined control sequence. l.13074 the return value is \bold {false} for \bold{success}. ! Undefined control sequence. l.13074 the return value is \bold{false} for \bold {success}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13075 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13077 \begin{SeeAlso} \relax ! Undefined control sequence. l.13078 \code {\LinkA{file.info}{file.info}} for more details on permissions, ! Undefined control sequence. l.13078 \code{\LinkA {file.info}{file.info}} for more details on permissions, ! Undefined control sequence. l.13079 \code {\LinkA{Sys.chmod}{Sys.chmod}} to change permissions, and ! Undefined control sequence. l.13079 \code{\LinkA {Sys.chmod}{Sys.chmod}} to change permissions, and ! Undefined control sequence. l.13080 \code {\LinkA{try}{try}} for a `test it and see' approach. ! Undefined control sequence. l.13080 \code{\LinkA {try}{try}} for a `test it and see' approach. ! Undefined control sequence. l.13082 \code {\LinkA{file\_test}{file.Rul.test}} for shell-style file tests. ! Undefined control sequence. l.13082 \code{\LinkA {file\_test}{file.Rul.test}} for shell-style file tests. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13083 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13085 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13086 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.13088 table(fa) # count successes & failures ! Misplaced alignment tab character &. l.13088 table(fa) # count successes & failures ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13089 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13090 \end{Examples} ! Undefined control sequence. l.13091 \HeaderA {file.choose}{Choose a File Interactively}{file.choose} ! Undefined control sequence. l.13092 \keyword {file}{file.choose} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13094 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13096 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13098 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13102 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13104 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13105 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13106 \item[\code{new}] Logical: choose the style of dialog box ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13108 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13109 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13111 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13113 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13115 \begin{SeeAlso} \relax ! Undefined control sequence. l.13116 \code {\LinkA{list.files}{list.files}} for non-interactive selection. ! Undefined control sequence. l.13116 \code{\LinkA {list.files}{list.files}} for non-interactive selection. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13117 \end{SeeAlso} ! Undefined control sequence. l.13118 \HeaderA {file.info}{Extract File Information}{file.info} ! Undefined control sequence. l.13119 \aliasA {file.mode}{file.info}{file.mode} ! Undefined control sequence. l.13120 \aliasA {file.mtime}{file.info}{file.mtime} ! Undefined control sequence. l.13121 \aliasA {file.size}{file.info}{file.size} ! Undefined control sequence. l.13122 \keyword {file}{file.info} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13124 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13127 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13129 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13137 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13139 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13140 \begin{ldescription} Overfull \hbox (56.55324pt too wide) in paragraph at lines 8467--8467 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] Underfull \hbox (badness 10000) in paragraph at lines 8495--8497 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 6542) in paragraph at lines 8533--8538 []@textrm See [][]@texttt https://gcc.gnu.org/onlinedocs/gcc/Instrumentation-Op tions.html[][][] @textrm (or the [99 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13141 \item[\code{...}] character vectors containing file paths. Tilde-ex... ! Undefined control sequence. l.13142 is done: see \code {\LinkA{path.expand}{path.expand}}. ! Undefined control sequence. l.13142 is done: see \code{\LinkA {path.expand}{path.expand}}. Underfull \hbox (badness 1817) in paragraph at lines 13141--13143 []\OT1/cmr/m/n/10 character vec-tors con-tain-ing file paths. Tilde-expansion i s done: see ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13143 \item[\code{extra\_cols}] Logical: return all cols rather than just the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13145 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13146 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13148 \begin{Details} \relax ! Undefined control sequence. l.13152 \code {\LinkA{file.exists}{file.exists}} on case-insensitive file sys... ! Undefined control sequence. l.13152 \code{\LinkA {file.exists}{file.exists}} on case-insensitive file sys... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13161 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13163 \begin{Value} ! Undefined control sequence. l.13164 For \code {file.info}, data frame with row names the file names and c... ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13165 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13166 \item[\code{size}] double: File size in bytes. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13167 \item[\code{isdir}] logical: Is the file a directory? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13168 \item[\code{mode}] integer of class \code{"octmode"}. The file perm... ! Undefined control sequence. l.13168 \item[\code{mode}] integer of class \code {"octmode"}. The file perm... ! Undefined control sequence. l.13169 printed in octal, for example \code {644}. [131]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13170 \item[\code{mtime, ctime, atime}] integer of class \code{"POSIXct"}: ! Undefined control sequence. l.13170 ..., ctime, atime}] integer of class \code {"POSIXct"}: ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13172 \item[\code{uid}] integer: the user ID of the file's owner. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13173 \item[\code{gid}] integer: the group ID of the file's group. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13174 \item[\code{uname}] character: \code{uid} interpreted as a user name. ! Undefined control sequence. l.13174 \item[\code{uname}] character: \code {uid} interpreted as a user name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13175 \item[\code{grname}] character: \code{gid} interpreted as a group name. ! Undefined control sequence. l.13175 \item[\code{grname}] character: \code {gid} interpreted as a group name. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13176 \end{ldescription} ! Undefined control sequence. l.13177 Unknown user and group names will be \code {NA}. ! Undefined control sequence. l.13179 If \code {extra\_cols} is false, only the first six columns are ! Undefined control sequence. l.13184 ...ent or non-readable files will be \code {NA}. ! Undefined control sequence. l.13185 The \code {uid}, \code{gid}, \code{uname} and \code{grname} columns ! Undefined control sequence. l.13185 The \code{uid}, \code {gid}, \code{uname} and \code{grname} columns ! Undefined control sequence. l.13185 The \code{uid}, \code{gid}, \code {uname} and \code{grname} columns ! Undefined control sequence. l.13185 ...id}, \code{gid}, \code{uname} and \code {grname} columns ! Undefined control sequence. l.13190 .... On Windows native file systems \code {ctime} is the file ! Undefined control sequence. l.13200 \code {file.mode}, \code{file.mtime} and \code{file.size} are ! Undefined control sequence. l.13200 \code{file.mode}, \code {file.mtime} and \code{file.size} are ! Undefined control sequence. l.13200 ...file.mode}, \code{file.mtime} and \code {file.size} are ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13202 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13204 \begin{Note} \relax ! Undefined control sequence. l.13206 not accessed by the \code {stat} system call. Such files will show up ! Undefined control sequence. l.13207 ...ery likely not be readable by any of \R {}'s input ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13209 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13211 \begin{SeeAlso} \relax ! Undefined control sequence. l.13212 \code {\LinkA{Sys.readlink}{Sys.readlink}} to find out about symbolic... ! Undefined control sequence. l.13212 \code{\LinkA {Sys.readlink}{Sys.readlink}} to find out about symbolic... ! Undefined control sequence. l.13213 \code {\LinkA{files}{files}}, \code{\LinkA{file.access}{file.access}}, ! Undefined control sequence. l.13213 \code{\LinkA {files}{files}}, \code{\LinkA{file.access}{file.access}}, ! Undefined control sequence. l.13213 \code{\LinkA{files}{files}}, \code {\LinkA{file.access}{file.access}}, ! Undefined control sequence. l.13213 \code{\LinkA{files}{files}}, \code{\LinkA {file.access}{file.access}}, ! Undefined control sequence. l.13214 \code {\LinkA{list.files}{list.files}}, ! Undefined control sequence. l.13214 \code{\LinkA {list.files}{list.files}}, ! Undefined control sequence. l.13215 and \code {\LinkA{DateTimeClasses}{DateTimeClasses}} for the date for... ! Undefined control sequence. l.13215 and \code{\LinkA {DateTimeClasses}{DateTimeClasses}} for the date for... ! Undefined control sequence. l.13217 \code {\LinkA{Sys.chmod}{Sys.chmod}} to change permissions. ! Undefined control sequence. l.13217 \code{\LinkA {Sys.chmod}{Sys.chmod}} to change permissions. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13218 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13220 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13221 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.13222 ncol(finf <- file.info(dir())) # at least six ! You can't use `macro parameter character #' in horizontal mode. l.13223 finf # the whole list ! You can't use `macro parameter character #' in horizontal mode. l.13224 # # Those that are more than 100 days old : ! You can't use `macro parameter character #' in horizontal mode. l.13224 ## Those that are more than 100 days old : ! Missing $ inserted. $ l.13225 finf <- file.info(dir(), extra_ cols = FALSE) ! Missing $ inserted. $ l.13227 Underfull \hbox (badness 3471) in paragraph at lines 13217--13227 []\OT1/cmr/m/n/10 Sys.chmodSys.chmod to change per-mis-sions. ncol(finf Underfull \hbox (badness 5022) in paragraph at lines 13217--13227 \OT1/cmr/m/n/10 <- file.info(dir())) at least six finf the whole list Those that Underfull \hbox (badness 4403) in paragraph at lines 13217--13227 \OT1/cmr/m/n/10 are more than 100 days old : finf <- file.info(dir(), extra$[]\ OML/cmm/m/it/10 ols \OT1/cmr/m/n/10 = Underfull \hbox (badness 3108) in paragraph at lines 13217--13227 \OML/cmm/m/it/10 FALSE\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 finf\OT1/cmr/m/n/10 [\O ML/cmm/m/it/10 difftime\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time\OT1/cmr/m/n/1 0 ()\OML/cmm/m/it/10 ; finf\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 mtime\OT1/cmr/m/n/10 "]\OML/cmm/m/it/10 ; units \OT1/cmr/m/n/ 10 = "\OML/cmm/m/it/10 days\OT1/cmr/m/n/10 ") \OML/cmm/m/it/10 > ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13229 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13230 \end{Examples} ! Undefined control sequence. l.13231 \HeaderA {file.path}{Construct Path to File}{file.path} ! Undefined control sequence. l.13232 \keyword {file}{file.path} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13234 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13237 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13239 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13243 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13245 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13246 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13247 \item[\code{...}] character vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13248 \item[\code{fsep}] the path separator to use. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13249 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13250 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13252 \begin{Details} \relax ! Undefined control sequence. l.13254 \code {\LinkA{paste}{paste}}) as this function is used extensively in... ! Undefined control sequence. l.13254 \code{\LinkA {paste}{paste}}) as this function is used extensively in... ! Undefined control sequence. l.13254 ...this function is used extensively in \R {} itself. ! Undefined control sequence. l.13256 ...used for environment paths such as \env {PATH} and ! Undefined control sequence. l.13257 \env {R\_LIBS} with \code{fsep = .Platform\$path.sep}. ! Undefined control sequence. l.13257 \env{R\_LIBS} with \code {fsep = .Platform\$path.sep}. ! Undefined control sequence. l.13260 \file {/} and \file{d:/} (although some functions/utilities do accept ! Undefined control sequence. l.13260 \file{/} and \file {d:/} (although some functions/utilities do accept ! Undefined control sequence. l.13261 them), so a trailing \code {/} or \code{\bsl{}} is removed. ! Undefined control sequence. l.13261 them), so a trailing \code{/} or \code {\bsl{}} is removed. ! Undefined control sequence. l.13261 ...), so a trailing \code{/} or \code{\bsl {}} is removed. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13262 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13264 \begin{Value} ! Undefined control sequence. l.13266 separated by \code {fsep} if all arguments have positive length; ! Undefined control sequence. l.13267 ...an empty character vector (unlike \code {\LinkA{paste}{paste}}). ! Undefined control sequence. l.13267 ...y character vector (unlike \code{\LinkA {paste}{paste}}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the Underfull \hbox (badness 10000) in paragraph at lines 8556--8560 []@textrm From GCC 8 @texttt signed-integer-overflow[] @textrm will no longer b e a de-fault part Underfull \hbox (badness 7907) in paragraph at lines 8556--8560 @textrm of `@texttt -fsanitize=undefined[]@textrm '[], but can be spec-i-fied s ep-a-rately. It adds op-tions Underfull \hbox (badness 5878) in paragraph at lines 8583--8587 []@textrm For more de-tails on the topic see [][]@texttt http://blog.regehr.org /archives/213[][][] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 8597--8604 []@textrm Recent ver-sions of @texttt clang[] @textrm on `@texttt x86_64[]@text rm '[] Linux have `Thread-San-i-tizer' Underfull \hbox (badness 4441) in paragraph at lines 8597--8604 @textrm ([][]@texttt https://code.google.com/p/thread-sanitizer/[][][]@textrm ) , a `data race de-tec-tor for C/C@texttt ++ Overfull \hbox (50.80455pt too wide) in paragraph at lines 8626--8626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [100 LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13268 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13270 \begin{Note} \relax ! Undefined control sequence. l.13271 ...nents are by default separated by \code {/} ! Undefined control sequence. l.13272 (not \code {\bsl{}}) on Windows. ! Undefined control sequence. l.13272 (not \code{\bsl {}}) on Windows. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13273 \end{Note} ! Undefined control sequence. l.13274 \HeaderA {file.show}{Display One or More Text Files}{file.show} ! Undefined control sequence. l.13275 \keyword {file}{file.show} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13277 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13280 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13282 \begin{Usage} [132]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13289 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13291 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13292 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13293 \item[\code{...}] one or more character vectors containing the names... ! Undefined control sequence. l.13294 ...o be displayed. Paths with have \LinkA {tilde expansion}{tilde ex... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13295 \item[\code{header}] character vector (of the same length as the num... ! Undefined control sequence. l.13296 specified in \code {...}) giving a header for each file being ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13298 \item[\code{title}] an overall title for the display. If a single s... ! Undefined control sequence. l.13299 window is used for the display, \code {title} will be used as the window ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13302 \item[\code{delete.file}] should the files be deleted after display?... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13304 \item[\code{pager}] the pager to be used: not used on all platforms ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13305 \item[\code{encoding}] character string giving the encoding to be as... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13307 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [101 l.13308 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13310 \begin{Details} \relax ! Undefined control sequence. l.13312 ...r other purposes as well, such as \code {\LinkA{page}{page}}. ! Undefined control sequence. l.13312 ... purposes as well, such as \code{\LinkA {page}{page}}. ! Undefined control sequence. l.13318 \code {pager} argument, which is a character vector specifying a system ! Undefined control sequence. l.13319 ...ull path or a command found on the \env {PATH}) to run on ! Undefined control sequence. l.13321 \file {R\_HOME/bin/pager}, which is a shell script running the comman... ! Undefined control sequence. l.13322 specified by the environment variable \env {PAGER} whose default is set ! Undefined control sequence. l.13323 at configuration, usually to \command {less}. On a Unix-alike ! Undefined control sequence. l.13324 \command {more} is used if \code{pager} is empty. ! Undefined control sequence. l.13324 \command{more} is used if \code {pager} is empty. ! Undefined control sequence. l.13327 let the user leave it up while \R {} continues running. The selectio... ! Undefined control sequence. l.13329 ...pted by lower-level code (such as \code {"internal"} and ! Undefined control sequence. l.13330 \code {"console"} on Windows), or by letting \code{pager} be an \R{} ! Undefined control sequence. l.13330 ...sole"} on Windows), or by letting \code {pager} be an \R{} ! Undefined control sequence. l.13330 ...s), or by letting \code{pager} be an \R {} ! Undefined control sequence. l.13331 ...ich will be called with arguments \code {(files, header, ! Undefined control sequence. l.13333 \code {file.show} and take care of interfacing to the GUI. ! Undefined control sequence. l.13335 The \command {R.app} GUI on macOS uses its internal pager irrespective ! Undefined control sequence. l.13336 of the setting of \code {pager}. ! Undefined control sequence. l.13338 Not all implementations will honour \code {delete.file}. In ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13342 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13344 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13346 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13348 \begin{SeeAlso} \relax ! Undefined control sequence. l.13349 \code {\LinkA{files}{files}}, \code{\LinkA{list.files}{list.files}}, ! Undefined control sequence. l.13349 \code{\LinkA {files}{files}}, \code{\LinkA{list.files}{list.files}}, ! Undefined control sequence. l.13349 \code{\LinkA{files}{files}}, \code {\LinkA{list.files}{list.files}}, ! Undefined control sequence. l.13349 \code{\LinkA{files}{files}}, \code{\LinkA {list.files}{list.files}}, ! Undefined control sequence. l.13350 \code {\LinkA{help}{help}}; ! Undefined control sequence. l.13350 \code{\LinkA {help}{help}}; ! Undefined control sequence. l.13351 \code {\LinkA{RShowDoc}{RShowDoc}} call \code{file.show()} for \code{... ! Undefined control sequence. l.13351 \code{\LinkA {RShowDoc}{RShowDoc}} call \code{file.show()} for \code{... ! Undefined control sequence. l.13351 ...{\LinkA{RShowDoc}{RShowDoc}} call \code {file.show()} for \code{ty... ! Undefined control sequence. l.13351 ...Doc}} call \code{file.show()} for \code {type = ! Undefined control sequence. l.13352 "text"}. Consider \code {\LinkA{getOption}{getOption}("pdfviewer")... ! Undefined control sequence. l.13352 "text"}. Consider \code{\LinkA {getOption}{getOption}("pdfviewer")... ! Undefined control sequence. l.13353 e.g., \code {\LinkA{system}{system}} for displaying pdf files. ! Undefined control sequence. l.13353 e.g., \code{\LinkA {system}{system}} for displaying pdf files. ! Undefined control sequence. l.13355 \code {\LinkA{file.edit}{file.edit}}. ! Undefined control sequence. l.13355 \code{\LinkA {file.edit}{file.edit}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13356 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13358 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13359 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13361 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13362 \end{Examples} ! Undefined control sequence. l.13363 \HeaderA {files}{File Manipulation}{files} ! Undefined control sequence. l.13364 \aliasA {file.append}{files}{file.append} ! Undefined control sequence. l.13365 \aliasA {file.copy}{files}{file.copy} ! Undefined control sequence. l.13366 \aliasA {file.create}{files}{file.create} ! Undefined control sequence. l.13367 \aliasA {file.exists}{files}{file.exists} ! Undefined control sequen]ce. l.13368 \aliasA {file.link}{files}{file.link} ! Undefined control sequence. l.13369 \aliasA {file.remove}{files}{file.remove} ! Undefined control sequence. l.13370 \aliasA {file.rename}{files}{file.rename} ! Undefined control sequence. l.13371 \aliasA {file.symlink}{files}{file.symlink} ! Undefined control sequence. l.13372 \keyword {file}{files} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13374 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13377 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13379 \begin{Usage} Underfull \hbox (badness 1490) in paragraph at lines 13355--13380 []\OT1/cmr/m/n/10 file.editfile.edit. file.show(file.path(R.home("doc"), "CO PY- Underfull \hbox (badness 10000) in paragraph at lines 13355--13380 \OT1/cmr/m/n/10 RIGHTS")) files-File Ma-nip-u-la-tion-files file.appendfilesf ile.append Underfull \hbox (badness 10000) in paragraph at lines 13355--13380 \OT1/cmr/m/n/10 file.copyfilesfile.copy file.createfilesfile.create file.exists filesfile.exists Underfull \hbox (badness 10000) in paragraph at lines 13355--13380 \OT1/cmr/m/n/10 file.linkfilesfile.link file.removefilesfile.remove file.rename filesfile.rename [133] [102 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13391 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13393 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13394 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13395 \item[\code{..., file1, file2}] character vectors, containing file n... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13396 \item[\code{from, to}] character vectors, containing file names or p... ! Undefined control sequence. l.13397 For \code {file.copy} and \code{file.symlink} ! Undefined control sequence. l.13397 For \code{file.copy} and \code {file.symlink} ! Undefined control sequence. l.13398 \code {to} can alternatively be the path to a single existing directory. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13399 \item[\code{overwrite}] logical; should existing destination files b... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13400 \item[\code{showWarnings}] logical; should the warnings on failure b... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13401 \item[\code{recursive}] logical. If \code{to} is a directory, should ! Undefined control sequence. l.13401 \item[\code{recursive}] logical. If \code {to} is a directory, should ! Undefined control sequence. l.13402 directories in \code {from} be copied (and their contents)? (Like ! Undefined control sequence. l.13403 \command {cp -R} on POSIX OSes.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13404 \item[\code{copy.mode}] logical: should file permission bits be cop... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.13406 \item[\code{copy.date}] logical: should file dates be preserved where ! Undefined control sequence. l.13407 possible? See \code {\LinkA{Sys.setFileTime}{Sys.setFileTime}}. ! Undefined control sequence. l.13407 possible? See \code{\LinkA {Sys.setFileTime}{Sys.setFileTime}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13408 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13409 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13411 \begin{Details} \relax ! Undefined control sequence. l.13412 The \code {...} arguments are concatenated to form one character ! Undefined control sequence. l.13414 ... functions expand path names: see \code {\LinkA{path.expand}{path.... ! Undefined control sequence. l.13414 ...ons expand path names: see \code{\LinkA {path.expand}{path.expand}}. Underfull \hbox (badness 10000) in paragraph at lines 13406--13415 []\OT1/cmr/m/n/10 logical: should file dates be pre-served where pos-si-ble? Se e ! Undefined control sequence. l.13416 \code {file.create} creates files with the given names if they do not ! Undefined control sequence. l.13419 `\LinkA {umask}{umask}' setting (where relevant). By default a warning ! Undefined control sequence. l.13422 \code {file.exists} returns a logical vector indicating whether the ! Undefined control sequence. l.13424 sense of the system's \code {stat} call: a file will be reported as ! Undefined control sequence. l.13425 ...ou have the permissions needed by \code {stat}. ! Undefined control sequence. l.13426 Existence can also be checked by \code {\LinkA{file.access}{file.acce... ! Undefined control sequence. l.13426 ...nce can also be checked by \code{\LinkA {file.access}{file.access}... ! Undefined control sequence. l.13429 for that use \code {\LinkA{file.access}{file.access}}.) What constit... ! Undefined control sequence. l.13429 for that use \code{\LinkA {file.access}{file.access}}.) What constit... ! Undefined control sequence. l.13435 ...ote the \emph{different} function \code {\LinkA{exists}{exists}} w... ! Undefined control sequence. l.13435 ... \emph{different} function \code{\LinkA {exists}{exists}} which ! Undefined control sequence. l.13436 checks for existence of \R {} objects. ! Undefined control sequence. l.13438 \code {file.remove} attempts to remove the files named in its argument. ! Undefined control sequence. l.13443 \code {file.rename} attempts to rename files (and \code{from} and ! Undefined control sequence. l.13443 ...me} attempts to rename files (and \code {from} and ! Undefined control sequence. l.13444 \code {to} must be of the same length). Where file permissions allow ! Undefined control sequence. l.13445 ... overwrite an existing element of \code {to}. This is subject ! Undefined control sequence. l.13447 something like \command {man 2 rename} on a Unix-alike): in particular ! Undefined control sequence. l.13449 ...cross file systems. (On Windows, \code {file.rename} can move ! Undefined control sequence. l.13451 ...med, typically neither or both of \code {from} ! Undefined control sequence. l.13452 and \code {to} must a directory, and if \code{to} exists it must be an ! Undefined control sequence. l.13452 ...code{to} must a directory, and if \code {to} exists it must be an [134 [103]] Chapter 5 ! Undefined control sequence. l.13455 \code {file.append} attempts to append the files named by its ! Undefined control sequence. l.13456 ...nt to those named by its first. The \R {} subscript ! Undefined control sequence. l.13460 \code {file.copy} works in a similar way to \code{file.append} but with ! Undefined control sequence. l.13460 ...e.copy} works in a similar way to \code {file.append} but with ! Undefined control sequence. l.13462 destination files is skipped unless \code {overwrite = TRUE}. The ! Undefined control sequence. l.13463 \code {to} argument can specify a single existing directory. If ! Undefined control sequence. l.13464 \code {copy.mode = TRUE} file read/write/execute permissions are copied ! Undefined control sequence. l.13465 where possible, restricted by `\LinkA {umask}{umask}'. (On Windows this ! Undefined control sequence. l.13469 separately. Using \code {copy.date = TRUE} may or may not copy the ! Undefined control sequence. l.13471 but is more likely to do so as from \R {} 3.4.0. ! Undefined control sequence. l.13473 \code {file.symlink} and \code{file.link} make symbolic and hard links ! Undefined control sequence. l.13473 \code{file.symlink} and \code {file.link} make symbolic and hard links ! Undefined control sequence. l.13474 ... systems which support them. For \code {file.symlink} the ! Undefined control sequence. l.13475 \code {to} argument can specify a single existing directory. (Unix and ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13480 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13482 \begin{Value} ! Undefined control sequence. l.13487 If \code {showWarnings = TRUE}, \code{file.create} will give a warning ! Undefined control sequence. l.13487 If \code{showWarnings = TRUE}, \code {file.create} will give a warning ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13489 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13491 \begin{Section} {Case-insensitive file systems} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13499 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13501 \begin{Section} {Warning} ! Undefined control sequence. l.13503 ... This is especially important for \code [104 {file.rename}, which has ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13507 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13509 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13511 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13513 \begin{SeeAlso} \relax ! Undefined control sequence. l.13514 \code {\LinkA{file.info}{file.info}}, \code{\LinkA{file.access}{file.... ! Undefined control sequence. l.13514 \code{\LinkA {file.info}{file.info}}, \code{\LinkA{file.access}{file.... ! Undefined control sequence. l.13514 \code{\LinkA{file.info}{file.info}}, \code {\LinkA{file.access}{file.... ! Undefined control sequence. l.13514 ...kA{file.info}{file.info}}, \code{\LinkA {file.access}{file.access}... ! Undefined control sequence. l.13514 ...LinkA{file.access}{file.access}}, \code {\LinkA{file.path}{file.pa... ! Undefined control sequence. l.13514 ...ile.access}{file.access}}, \code{\LinkA {file.path}{file.path}}, ! Undefined control sequence. l.13515 \code {\LinkA{file.show}{file.show}}, \code{\LinkA{list.files}{list.f... ! Undefined control sequence. l.13515 \code{\LinkA {file.show}{file.show}}, \code{\LinkA{list.files}{list.f... ! Undefined control sequence. l.13515 \code{\LinkA{file.show}{file.show}}, \code {\LinkA{list.files}{list.f... ! Undefined control sequence. l.13515 ...kA{file.show}{file.show}}, \code{\LinkA {list.files}{list.files}}, ! Undefined control sequence. l.13516 \code {\LinkA{unlink}{unlink}}, \code{\LinkA{basename}{basename}}, ! Undefined control sequence. l.13516 \code{\LinkA {unlink}{unlink}}, \code{\LinkA{basename}{basename}}, ! Undefined control sequence. l.13516 \code{\LinkA{unlink}{unlink}}, \code {\LinkA{basename}{basename}}, ! Undefined control sequence. l.13516 ...e{\LinkA{unlink}{unlink}}, \code{\LinkA {basename}{basename}}, ! Undefined control sequence. l.13517 \code {\LinkA{path.expand}{path.expand}}. ! Undefined control sequence. l.13517 \code{\LinkA {path.expand}{path.expand}}. ! Undefined control sequence. l.13519 \code {\LinkA{dir.create}{dir.create}}. ! Undefined control sequence. l.13519 \code{\LinkA {dir.create}{dir.create}}. ! Undefined control sequence. l.13521 \code {\LinkA{Sys.glob}{Sys.glob}} to expand wildcards in file specif... ! Undefined control sequence. l.13521 \code{\LinkA {Sys.glob}{Sys.glob}} to expand wildcards in file specif... ! Undefined control sequence. l.13523 \code {\LinkA{file\_test}{file.Rul.test}}, \code{\LinkA{Sys.readlink}... ! Undefined control sequence. l.13523 \code{\LinkA {file\_tes]t}{file.Rul.test}}, \code{\LinkA{Sys.readlink}... ! Undefined control sequence. l.13523 ...inkA{file\_test}{file.Rul.test}}, \code {\LinkA{Sys.readlink}{Sys.... ! Undefined control sequence. l.13523 ...le\_test}{file.Rul.test}}, \code{\LinkA {Sys.readlink}{Sys.readlin... ! Undefined control sequence. l.13525 \url {https://en.wikipedia.org/wiki/Hard_link} and ! Missing $ inserted. $ l.13525 \url{https://en.wikipedia.org/wiki/Hard_ link} and ! Extra }, or forgotten $. l.13525 ...ttps://en.wikipedia.org/wiki/Hard_link} and ! Undefined control sequence. l.13526 \url {https://en.wikipedia.org/wiki/Symbolic_link} for the concepts of ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13528 \end{SeeAlso} ! Missing $ inserted. $ l.13528 \end{SeeAlso} ! Missing } inserted. } l.13528 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13530 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13531 \begin{ExampleCode} ! Undefined control sequence. l.13532 cat("file A\n ", file = "A") ! Undefined control sequence. l.13533 cat("file B\n ", file = "B") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13548 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13549 \end{Examples} ! Undefined control sequence. l.13550 \HeaderA {files2}{Manipulaton of Directories and File Permissions}{fi... ! Undefined control sequence. l.13551 \aliasA {dir.create}{files2}{dir.create} ! Undefined control sequence. l.13552 \aliasA {dir.exists}{files2}{dir.exists} ! Undefined control sequence. l.13553 \aliasA {Sys.chmod}{files2}{Sys.chmod} ! Undefined control sequence. l.13554 \aliasA {Sys.umask}{files2}{Sys.umask} ! Undefined control sequence. l.13555 \aliasA {umask}{files2}{umask} ! Undefined control sequence. l.13556 \keyword {file}{files2} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13558 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13561 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13563 \begin{Usage} Overfull \hbox (257.88861pt too wide) in paragraph at lines 13525--13564 []\OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Hard$[]\OML/cmm/m/it/10 inkand[ ]fortheconceptsoflinksandtheirlimitations:$ Underfull \hbox (badness 10000) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 file.copy("A", "C") dir.create("tmp") file.copy(c("A", "B"), "t mp") Underfull \hbox (badness 10000) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 list.files("tmp") setwd("tmp") file.remove("B") file.symlink(fi le.path("..", Underfull \hbox (badness 10000) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 c("A", "B")), ".") setwd("..") un-link("tmp", re-cur-sive = TRU E) Underfull \hbox (badness 6808) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 file.remove("A", "B", "C") files2Manipulaton of Di-rec-to-rie s and Underfull \hbox (badness 10000) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 File Per-mis-sions-files2 dir.createfiles2dir.create dir.exists files2dir.exists Underfull \hbox (badness 10000) in paragraph at lines 13525--13564 \OT1/cmr/m/n/10 Sys.chmodfiles2Sys.chmod Sys.umaskfiles2Sys.umask umask-files2u mask [135] Overfull \hbox (27.74675pt too wide) in paragraph at lines 13569--13569 []\OT1/cmtt/m/n/10 dir.create(path, showWarnings = TRUE, recursive = FALSE, mod e = "0777")[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13570 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13572 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13573 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13574 \item[\code{path}] a character vector containing a single path name.... ! Undefined control sequence. l.13575 expansion (see \code {\LinkA{path.expand}{path.expand}}) is done. ! Undefined control sequence. l.13575 expansion (see \code{\LinkA {path.expand}{path.expand}}) is done. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13576 \item[\code{paths}] character vectors containing file or directory p... ! Undefined control sequence. l.13577 expansion (see \code {\LinkA{path.expand}{path.expand}}) is done. ! Undefined control sequence. l.13577 expansion (see \code{\LinkA {path.expand}{path.expand}}) is done. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13578 \item[\code{showWarnings}] logical; should the warnings on failure b... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13579 \item[\code{recursive}] logical. Should elements of the path other t... ! Undefined control sequence. l.13580 ...If true, like the Unix command \command {mkdir -p}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13581 \item[\code{mode}] the mode to be used on Unix-alikes: it will be ! Undefined control sequence. l.13582 coerced by \code {\LinkA{as.octmode}{as.octmode}}. For \code{Sys.chm... ! Undefined control sequence. l.13582 coerced by \code{\LinkA {as.octmode}{as.octmode}}. For \code{Sys.chm... ! Undefined control sequence. l.13582 ...kA{as.octmode}{as.octmode}}. For \code {Sys.chmod} it is ! Undefined control sequence. l.13583 recycled a [105long \code {paths}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13584 \item[\code{use\_umask}] logical: should the mode be restricted by the ! Undefined control sequence. l.13585 \code {umask} setting? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13586 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13587 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13589 \begin{Details} \relax ! Undefined control sequence. l.13590 \code {dir.create} creates the last element of the path, unless ! Undefined control sequence. l.13591 \code {recursive = TRUE}. Trailing path separators are discarded. ! Undefined control sequence. l.13592 The mode will be modified by the \code {umask} setting in the same way ! Undefined control sequence. l.13593 as for the system function \code {mkdir}. What modes can be set is ! Undefined control sequence. l.13596 system call \code {mkdir}, e.g.~\command{man 2 mkdir} (and not that on ! Undefined control sequence. l.13596 system call \code{mkdir}, e.g.~\command {man 2 mkdir} (and not that on ! Undefined control sequence. l.13601 example \code {dir.create("G.S.")} creates \file{"G.S"}. This is ! Undefined control sequence. l.13601 ...\code{dir.create("G.S.")} creates \file {"G.S"}. This is ! Undefined control sequence. l.13608 \code {Sys.chmod} sets the file permissions of one or more files. ! Undefined control sequence. l.13610 See the comments for \code {dir.create} for how modes are interpreted. ! Undefined control sequence. l.13613 system call \code {chmod}, e.g.~\command{man 2 chmod} (and not that on ! Undefined control sequence. l.13613 system call \code{chmod}, e.g.~\command {man 2 chmod} (and not that on ! Undefined control sequence. l.13619 \code {Sys.umask} sets the \code{umask} and returns the previous value: ! Undefined control sequence. l.13619 \code{Sys.umask} sets the \code {umask} and returns the previous value: ! Undefined control sequence. l.13620 as a special case \code {mode = NA} just returns the current value. ! Undefined control sequence. l.13621 ...ted (when a warning is issued and \code {"0"} ! Undefined control sequence. l.13623 system call \code {umask}, e.g.~\command{man 2 umask}. ! Undefined control sequence. l.13623 system call \code{umask}, e.g.~\command {man 2 umask}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13630 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13632 \begin{Value} ! Undefined control sequence. l.13633 \code {dir.exists} returns a logical vector of \code{TRUE} or ! Undefined control sequence. l.13633 ...ists} returns a logical vector of \code {TRUE} or ! Undefined control sequence. l.13634 \code {FALSE} values (without names). ! Undefined control sequence. l.13636 \code {dir.create} and \code{Sys.chmod} return invisibly a logical ve... ! Undefined control sequence. l.13636 \code{dir.create} and \code {Sys.chmod} return invisibly a logical ve... ! Undefined control sequence. l.13639 failure. \code {dir.create} indicates failure if the directory already ! Undefined control sequence. l.13640 exists. If \code {showWarnings = TRUE}, \code{dir.create} will give a ! Undefined control sequence. l.13640 .... If \code{showWarnings = TRUE}, \code {dir.create} will give a ! Undefined control sequence. l.13642 ...an already existing component for \code {recursive = TRUE}). [136]] ! Undefined control sequence. l.13644 \code {Sys.umask} returns the previous value of the \code{umask}, ! Undefined control sequence. l.13644 ...returns the previous value of the \code {umask}, ! Undefined control sequence. l.13645 as a length-one object of class \code {"\LinkA{octmode}{octmode}"}: the ! Undefined control sequence. l.13645 ...ength-one object of class \code{"\LinkA {octmode}{octmode}"}: the ! Undefined control sequence. l.13646 visibility flag is off unless \code {mode} is \code{NA}. ! Undefined control sequence. l.13646 ...flag is off unless \code{mode} is \code {NA}. ! Undefined control sequence. l.13648 See also the section in the help for \code {\LinkA{file.exists}{file.... ! Undefined control sequence. l.13648 ...he section in the help for \code{\LinkA {file.exists}{file.exists}... ! Undefined control sequence. l.13649 ...systems for the interpretation of \code {path} ! Undefined control sequence. l.13650 and \code {paths}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13651 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13653 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13655 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13657 \begin{SeeAlso} \relax ! Undefined control sequence. l.13658 \code {\LinkA{file.info}{file.info}}, \code{\LinkA{file.exists}{file.... ! Undefined control sequence. l.13658 \code{\LinkA {file.info}{file.info}}, \code{\LinkA{file.exists}{file.... ! Undefined control sequence. l.13658 \code{\LinkA{file.info}{file.info}}, \code {\LinkA{file.exists}{file.... ! Undefined control sequence. l.13658 ...kA{file.info}{file.info}}, \code{\LinkA {file.exists}{file.exists}... ! Undefined control sequence. l.13658 ...LinkA{file.exists}{file.exists}}, \code {\LinkA{file.path}{file.pa... ! Undefined control sequence. l.13658 ...ile.exists}{file.exists}}, \code{\LinkA {file.path}{file.path}}, ! Undefined control sequence. l.13659 \code {\LinkA{list.files}{list.files}}, \code{\LinkA{unlink}{unlink}}, ! Undefined control sequence. l.13659 \code{\LinkA {list.files}{list.files}}, \code{\LinkA{unlink}{unlink}}, ! Undefined control sequence. l.13659 ...{\LinkA{list.files}{list.files}}, \code {\LinkA{unlink}{unlink}}, ! Undefined control sequence. l.13659 ...{list.files}{list.files}}, \code{\LinkA {unlink}{unlink}}, ! Undefined control sequence. l.13660 \code {\LinkA{basename} [106{basename}}, \code{\LinkA{path.expand}{path.ex... ! Undefined control sequence. l.13660 \code{\LinkA {basename}{basename}}, \code{\LinkA{path.expand}{path.ex... ! Undefined control sequence. l.13660 \code{\LinkA{basename}{basename}}, \code {\LinkA{path.expand}{path.ex... ! Undefined control sequence. l.13660 ...inkA{basename}{basename}}, \code{\LinkA {path.expand}{path.expand}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13661 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13663 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13664 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.13665 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.13665 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.13666 # # Fix up maximal allowed permissions in a file tree ! You can't use `macro parameter character #' in horizontal mode. l.13666 ## Fix up maximal allowed permissions in a file tree ! Missing $ inserted. $ l.13670 ! You can't use `macro parameter character #' in vertical mode. l.13671 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.13671 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13672 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13673 \end{Examples} ! Undefined control sequence. l.13674 \HeaderA {find.package}{Find Packages}{find.package} ! Undefined control sequence. l.13675 \aliasA {path.package}{find.package}{path.package} ! Undefined control sequence. l.13676 \keyword {files}{find.package} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13678 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13680 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13682 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 13671--13683 []\OT1/cmr/m/n/10 End(Not run) find.packageFind Pack-ages-find.pa]ckage Underfull \hbox (badness 2529) in paragraph at lines 13671--13683 \OT1/cmr/m/n/10 path.packagefind.packagepath.package files-find.package Find th e paths to ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13689 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13691 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13692 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13693 \item[\code{package}] character vector: the names of packages. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13694 \item[\code{lib.loc}] a character vector describing the location of ... ! Undefined control sequence. l.13694 ...er vector describing the location of \R {} ! Undefined control sequence. l.13695 library trees to search through, or \code {NULL}. The default value ! Undefined control sequence. l.13696 of \code {NULL} corresponds to checking the loaded namespace, then ! Undefined control sequence. l.13697 all libraries currently known in \code {\LinkA{.libPaths}{.libPaths}()}. ! Undefined control sequence. l.13697 ...braries currently known in \code{\LinkA {.libPaths}{.libPaths}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13698 \item[\code{quiet}] logical. Should this not give warnings or an error ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13700 \item[\code{verbose}] a logical. If \code{TRUE}, additional diagnos... ! Undefined control sequence. l.13700 \item[\code{verbose}] a logical. If \code {TRUE}, additional diagnos... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13702 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13703 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13705 \begin{Details} \relax ! Undefined control sequence. l.13706 \code {find.package} returns path to the locations where the ! Undefined control sequence. l.13707 given packages are found. If \code {lib.loc} is \code{NULL}, then ! Undefined control sequence. l.13707 ... are found. If \code{lib.loc} is \code {NULL}, then ! Undefined control sequence. l.13709 ... the first match is used. Unless \code {quiet = ! Undefined control sequence. l.13711 found, and an error if none are. If \code {verbose} is true, warnings ! Undefined control sequence. l.13713 returned it must contain a either a \file {Meta} subdirectory or a ! Undefined control sequence. l.13714 \file {DESCRIPTION} file containing a valid \code{version} field, but ! Undefined control sequence. l.13714 ...CRIPTION} file containing a valid \code {version} field, but ! Undefined control sequence. l.13716 \code {lib.loc} was set suitably). ! Undefined control sequence. l.13718 \code {find.package} is not usually the right tool to find out if a ! Undefined control sequence. l.13720 \code {\LinkA{require}{require}} to try to load it. It need not be i... ! Undefined control sequence. l.13720 \code{\LinkA {require}{require}} to try to load it. It need not be i... ! Undefined control sequence. l.13722 the running version of \R {}, there might be dependencies which are not ! Undefined control sequence. l.13725 \code {path.package} returns the paths from which the named packages ! Undefined control sequence. l.13727 Unless \code {quiet = TRUE} it will warn if some of the packages named ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13729 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13731 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13733 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13735 \begin{SeeAlso} \relax ! Undefined control sequence. l.13736 \code {\LinkA{path.expand}{path.expand}} and \code{\LinkA{normalizePa... ! Undefined control sequence. l.13736 \code{\LinkA {path.expand}{path.expand}} and \code{\LinkA{normalizePa... ! Undefined control sequence. l.13736 ...kA{path.expand}{path.expand}} and \code {\LinkA{normalizePath}{nor... ! Undefined control sequence. l.13736 ....expand}{path.expand}} and \code{\LinkA {normalizePath}{normalizeP... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13738 \end{SeeAlso} ! Undefined control sequence. l.13739 \HeaderA {findInterval}{Find Interval Numbers or Indices}{findInterval} ! Undefined control sequence. l.13740 \keyword {arith}{findInterval} ! Undefined control sequence. l.13741 \keyword {utilities}{findInterval} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13743 \begin{Description} \relax ! Undefined control sequence. l.13744 ... of non-decreasing breakpoints in \code {vec}, find the ! Undefined control sequence. l.13745 interval containing each element of \code {x}; i.e., if ! Undefined control sequence. l.13746 \code {i <- findInterval(x,v)}, for each index \code{j} in \code{x} ! Undefined control sequence. l.13746 ...indInterval(x,v)}, for each index \code {j} in \code{x} ! Undefined control sequence. l.13746 ...x,v)}, for each index \code{j} in \code {x} ! Undefined control sequence. l.13747 \eqn {v_{i_j} \le x_j < v_{i_j + 1}}{} ! Missing $ inserted. $ l.13747 \eqn{v_ {i_j} \le x_j < v_{i_j + 1}}{} ! Extra }, or forgotten $. l.13747 \eqn{v_{i_j} \le x_j < v_{i_j + 1}} {} ! Undefined control sequence. l.13748 where \eqn {v_0 := -\infty}{}, ! Undefined control sequence. l.13749 \eqn {v_{N+1} := +\infty}{}, and \code{N <- length(v)}. ! Undefined control sequence. l.13749 \eqn{v_{N+1} := +\infty}{}, and \code {N <- length(v)}. ! Undefined control sequence. l.13751 on the optional arguments \code {rightmost.closed} and \code{all.insi... ! Undefined control sequence. l.13751 ...ments \code{rightmost.closed} and \code {all.inside}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13752 \end{Description} ! Missing $ inserted. $ l.13752 \end{Description} ! Missing } inserted. } l.13752 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13754 \begin{Usage} Underfull \hbox (badness 1303) in paragraph at lines 13725--13755 \OT1/cmr/m/n/10 or In-dices-find-In-ter-val arithfind-In-ter-val util-i-ties-fi nd-In-ter-val Given a vec-tor Underfull \hbox (badness 1577) in paragraph at lines 13725--13755 \OT1/cmr/m/n/10 of non-decreasing break-points in vec, find the in-ter-val con- tain-ing each Overfull \hbox (435.58255pt too wide) in paragraph at lines 13725--13755 \OML/cmm/m/it/10 v[][]where[][]; [][]; and[]:Atthetwoboundaries; thereturnedind exmaydifferby\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; dependingontheoptionalargument s[]and[]:$ [137 [107] Overfull \hbox (1.49698pt too wide) in paragraph at lines 13758--13758 []\OT1/cmtt/m/n/10 findInterval(x, vec, rightmost.closed = FALSE, all.inside = FALSE,[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13759 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13761 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13762 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13763 \item[\code{x}] numeric. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13764 \item[\code{vec}] numeric, sorted (weakly) increasingly, of length \... ! Undefined control sequence. l.13764 ... (weakly) increasingly, of length \code {N}, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13766 \item[\code{rightmost.closed}] logical; if true, the rightmost inter... ! Undefined control sequence. l.13767 \code {vec[N-1] .. vec[N]} is treated as \emph{closed}, see below. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13768 \item[\code{all.inside}] logical; if true, the returned indices are ... ! Undefined control sequence. l.13769 into \code {1,...,N-1}, i.e., \code{0} is mapped to \code{1} ! Undefined control sequence. l.13769 into \code{1,...,N-1}, i.e., \code {0} is mapped to \code{1} ! Undefined control sequence. l.13769 ...N-1}, i.e., \code{0} is mapped to \code {1} ! Undefined control sequence. l.13770 and \code {N} to \code{N-1}. ! Undefined control sequence. l.13770 and \code{N} to \code {N-1}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13771 \item[\code{left.open}] logical; if true all the intervals are open ... ! Undefined control sequence. l.13772 ...d at right; in the formulas below, \eqn {\le}{} should be ! Missing $ inserted. $ l.13772 ... right; in the formulas below, \eqn{\le }{} should be ! Extra }, or forgotten $. l.13772 ...right; in the for]mulas below, \eqn{\le} {} should be ! Undefined control sequence. l.13773 swapped with \eqn {<}{} (and \eqn{>}{} with \eqn{\ge}{}), and ! Undefined control sequence. l.13773 swapped with \eqn{<}{} (and \eqn {>}{} with \eqn{\ge}{}), and ! Undefined control sequence. l.13773 ...with \eqn{<}{} (and \eqn{>}{} with \eqn {\ge}{}), and ! Undefined control sequence. l.13774 \code {rightmost.closed} means `leftmost is closed'. This may ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13776 \end{ldescription} ! Missing $ inserted. $ l.13776 \end{ldescription} ! Missing } inserted. } l.13776 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13777 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13779 \begin{Details} \relax ! Undefined control sequence. l.13780 The function \code {findInterval} finds the index of one vector \code... ! Undefined control sequence. l.13780 ...al} finds the index of one vector \code {x} in ! Undefined control sequence. l.13781 another, \code {vec}, where the latter must be non-decreasing. Where ! Undefined control sequence. l.13782 this is trivial, equivalent to \code {apply( outer(x, vec, ">="), 1, ... ! Undefined control sequence. l.13784 ensuring \eqn {O(n \log N)}{} complexity where ! Missing $ inserted. $ l.13784 ensuring \eqn{O(n \log N)}{} complexity where ! Extra }, or forgotten $. l.13784 ensuring \eqn{O(n \log N)} {} complexity where ! Undefined control sequence. l.13785 \code {n <- length(x)} (and \code{N <- length(vec)}). For (almost) ! Undefined control sequence. l.13785 \code{n <- length(x)} (and \code {N <- length(vec)}). For (almost) ! Undefined control sequence. l.13786 sorted \code {x}, it will be even faster, basically \eqn{O(n)}{}. ! Undefined control sequence. l.13786 ... it will be even faster, basically \eqn {O(n)}{}. ! Missing $ inserted. $ l.13787 Underfull \hbox (badness 10000) in paragraph at lines 13771--13787 []\OT1/cmr/m/n/10 logical; if true all the in-ter-vals are open at left Underfull \hbox (badness 10000) in paragraph at lines 13771--13787 \OT1/cmr/m/n/10 and closed at right; in the for-mu-las be-low, $\OMS/cmsy/m/n/1 0 ^^T Overfull \hbox (277.57811pt too wide) in paragraph at lines 13771--13787 []\OML/cmm/m/it/10 shouldbeswappedwith[][]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 and [][]with[][]\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; and[]means\OT1/cmr/m/n/10 `\OML /cmm/m/it/10 leftmostisclosed[]:Thismaybeuseful; e:g:; insurvivalanalysiscomput ations:$ Underfull \hbox (badness 1721) in paragraph at lines 13771--13787 \OT1/cmr/m/n/10 The func-tion find-In-ter-val finds the in-dex of one vec-tor x in an-other, Underfull \hbox (badness 2626) in paragraph at lines 13771--13787 \OT1/cmr/m/n/10 vec, where the lat-ter must be non-decreasing. Where this is tr iv- Underfull \hbox (badness 3250) in paragraph at lines 13771--13787 \OT1/cmr/m/n/10 ial, equiv-a-lent to ap-ply( outer(x, vec, ">="), 1, sum), as a mat- Underfull \hbox (badness 2608) in paragraph at lines 13771--13787 \OT1/cmr/m/n/10 ter of fact, the in-ter-nal al-go-rithm uses in-ter-val search en-sur-ing O(n Overfull \hbox (178.9275pt too wide) in paragraph at lines 13771--13787 [] \OML/cmm/m/it/10 N\OT1/cmr/m/n/10 )[]\OML/cmm/m/it/10 complexitywhere[]\OT1/ cmr/m/n/10 (\OML/cmm/m/it/10 and[]\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :For\OT1/cm r/m/n/10 (\OML/cmm/m/it/10 almost\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 sortedx; itw illbeevenfaster; basically[][]:$ ! Undefined control sequence. l.13789 function, and indeed, \code {findInterval(t, sort(X))} is ! Undefined control sequence. l.13790 \emph{identical} to \eqn {n F_n(t; X_1,\dots,X_n)}{} where \eqn{F_n}{... ! Missing $ inserted. $ l.13790 \emph{identical} to \eqn{n F_ n(t; X_1,\dots,X_n)}{} where \eqn{F_n}{... ! Extra }, or forgotten $. l.13790 ...tical} to \eqn{n F_n(t; X_1,\dots,X_n)} {} where \eqn{F_n}{} is th... ! Undefined control sequence. l.13790 ...n{n F_n(t; X_1,\dots,X_n)}{} where \eqn {F_n}{} is the empirical d... ! Undefined control sequence. l.13791 function of \eqn {X_1,\dots,X_n}{}. ! Missing $ inserted. $ l.13792 Underfull \hbox (badness 10000) in paragraph at lines 13788--13792 []\OT1/cmr/m/n/10 This is the same com-pu-ta-tion as for the em-pir-i-cal dis-t ri-bu- Underfull \hbox (badness 4181) in paragraph at lines 13788--13792 \OT1/cmr/m/n/10 tion func-tion, and in-deed, find-In-ter-val(t, sort(X)) is \OT 1/cmr/m/it/10 iden-ti-cal \OT1/cmr/m/n/10 to n ! Undefined control sequence. l.13793 When \code {rightmost.closed = TRUE}, the result for \code{x[j] = vec... ! Undefined control sequence. l.13793 ...st.closed = TRUE}, the result for \code {x[j] = vec[N]} ! Undefined control sequence. l.13794 (\eqn { = \max vec}{}), is \code{N - 1} as for all other ! Missing $ inserted. $ l.13794 (\eqn{ = \max vec}{}), is \code{N - 1} as for all other ! Extra }, or forgotten $. l.13794 (\eqn{ = \max vec} {}), is \code{N - 1} as for all other ! Undefined control sequence. l.13794 (\eqn{ = \max vec}{}), is \code {N - 1} as for all other ! Missing $ inserted. $ l.13796 Underfull \hbox (badness 1648) in paragraph at lines 13793--13796 []\OT1/cmr/m/n/10 When right-most.closed = TRUE, the re-sult for x[j] = vec[N] ( = ! Undefined control sequence. l.13797 \code {left.open = TRUE} is occasionally useful, e.g., for survival d... ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13799 ...following is always true: \begin{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13803 \end{alltt} ! Undefined control sequence. l.13805 where \code {N <- length(vec)} as above. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13806 \end{Details} ! Missing } inserted. } l.13806 \end{Details} ! Missing } inserted. } l.13806 \end{Details} ! Missing } inserted. } l.13806 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13808 \begin{Value} ! Undefined control sequence. l.13809 vector of length \code {length(x)} with values in \code{0:N} (and ! Undefined control sequence. l.13809 ...h \code{length(x)} with values in \code {0:N} (and ! Undefined control sequence. l.13810 \code {NA}) where \code{N <- length(vec)}, or values coerced to ! Undefined control sequence. l.13810 \code{NA}) where \code {N <- length(vec)}, or values coerced to ! Undefined control sequence. l.13811 \code {1:(N-1)} if and only if \code{all.inside = TRUE} (equivalently... ! Undefined control sequence. l.13811 \code{1:(N-1)} if and only if \code {all.inside = TRUE} (equivalently... ! Undefined control sequence. l.13812 ...nside} the intervals). Note that \code {\LinkA{NA}{NA}}s are ! Undefined control sequence. l.13812 ...the intervals). Note that \code{\LinkA {NA}{NA}}s are ! Undefined control sequence. l.13813 propagated from \code {x}, and \code{\LinkA{Inf}{Inf}} values are all... ! Undefined control sequence. l.13813 propagated from \code{x}, and \code {\LinkA{Inf}{Inf}} values are all... ! Undefined control sequence. l.13813 propagated from \code{x}, and \code{\LinkA {Inf}{Inf}} values are all... ! Undefined control sequence. l.13814 both \code {x} and \code{vec}. ! Undefined control sequence. l.13814 both \code{x} and \code {vec}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13815 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13817 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13819 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13821 \begin{SeeAlso} \relax ! Undefined control sequence. l.13822 \code {\LinkA{approx}{approx}(*, method = "constant")} which is a ! Undefined control sequence. l.13822 \code{\LinkA {approx}{approx}(*, method = "constant")} which is a ! Undefined control sequence. l.13823 generalization of \code {findInterval()}, \code{\LinkA{ecdf}{ecdf}} for ! Undefined control sequence. l.13823 ...izat [108ion of \code{findInterval()}, \code {\LinkA{ecdf}{ecdf}} for ! Undefined control sequence. l.13823 ... of \code{findInterval()}, \code{\LinkA {ecdf}{ecdf}} for ! Undefined control sequence. l.13825 of \eqn {n}{}) also basically the same as \code{findInterval(.)}. ! Undefined control sequence. l.13825 ...{n}{}) also basically the same as \code {findInterval(.)}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13826 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13828 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13829 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.13831 v <- c(5, 10, 15) # create two bins [5,10) and [10,15) ! You can't use `macro parameter character #' in horizontal mode. l.13838 tt[it < 1 | it >= N] # only first and last are outside range(X) ! You can't use `macro parameter character #' in vertical mode. l.13840 # # 'left.open = TRUE' means "mirroring" : ! You can't use `macro parameter character #' in vertical mode. l.13840 ## 'left.open = TRUE' means "mirroring" : ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13845 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13846 \end{Examples} ! Undefined control sequence. l.13847 \HeaderA {force}{Force Evaluation of an Argument}{force} ! Undefined control sequence. l.13848 \keyword {data}{force} ! Undefined control sequence. l.13849 \keyword {programming}{force} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13851 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13853 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13855 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13859 \end{Usage} ]! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13861 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13862 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13863 \item[\code{x}] a formal argument of the enclosing function. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13864 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13865 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13867 \begin{Details} \relax ! Undefined control sequence. l.13868 \code {force} forces the evaluation of a formal argument. This can ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13872 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13874 \begin{Note} \relax [138] ! Undefined control sequence. l.13878 \code {force} does not force the evaluation of other ! Undefined control sequence. l.13879 \LinkA {promises}{promises}. (It works by forcing the promise that ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13883 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13885 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13886 \begin{ExampleCode} ! Missing $ inserted. $ l.13889 for (i in seq_ along(lf)) lf[[i]] <- f(i) ! You can't use `macro parameter character #' in math mode. l.13890 lf[[1]]() # returns 5 ! Missing $ inserted. $ l.13891 ! Missing $ inserted. $ l.13894 for (i in seq_ along(lg)) lg[[i]] <- g(i) ! You can't use `macro parameter character #' in math mode. l.13895 lg[[1]]() # returns 1 ! Missing $ inserted. $ l.13896 ! You can't use `macro parameter character #' in vertical mode. l.13897 # # This is identical to ! You can't use `macro parameter character #' in vertical mode. l.13897 ## This is identical to ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13899 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13900 \end{Examples} ! Undefined control sequence. l.13901 \HeaderA {forceAndCall}{Call a function with Some Arguments Forced}{f... ! Undefined control sequence. l.13902 \keyword {programming}{forceAndCall} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13904 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13907 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13909 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13913 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explana [109tion. Type H for immediate help. ... l.13915 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13916 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13917 \item[\code{n}] number of leading arguments to force. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13918 \item[\code{FUN}] function to call. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13919 \item[\code{...}] arguments to \code{FUN}. ! Undefined control sequence. l.13919 \item[\code{...}] arguments to \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13920 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13921 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13923 \begin{Details} \relax ! Undefined control sequence. l.13924 \code {forceAndCall} calls the function \code{FUN} with arguments ! Undefined control sequence. l.13924 ...{forceAndCall} calls the function \code {FUN} with arguments ! Undefined control sequence. l.13925 specified in \code {...}. If the value of \code{FUN} is a closure ! Undefined control sequence. l.13925 ...d in \code{...}. If the value of \code {FUN} is a closure ! Undefined control sequence. l.13926 then the first \code {n} arguments to the function are evaluated ! Undefined control sequence. l.13928 the function body. If the value of \code {FUN} is a primitive then ! Undefined control sequence. l.13929 the call \code {FUN(...)} is evaluated in the usual way. ! Undefined control sequence. l.13931 \code {forceAndCall} is intended to help defining higher order ! Undefined control sequence. l.13932 functions like \code {\LinkA{apply}{apply}} to behave more reasonably... ! Undefined control sequence. l.13932 functions like \code{\LinkA {apply}{apply}} to behave more reasonably... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13935 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13937 \begin{SeeAlso} \relax ! Undefined control sequence. l.13938 \code {\LinkA{force}{force}}, \code{\LinkA{promise}{promise}}, \code{... ! Undefined control sequence. l.13938 \code{\LinkA {force}{force}}, \code{\LinkA{promise}{promise}}, \code{... ! Undefined control sequence. l.13938 \code{\LinkA{force}{force}}, \code {\LinkA{promise}{promise}}, \code{... ! Undefined control sequence. l.13938 \code{\LinkA{force}{force}}, \code{\LinkA {promise}{promise}}, \code{... ! Undefined control sequence. l.13938 ... \code{\LinkA{promise}{promise}}, \code {\LinkA{closure}{closure}}. ! Undefined control sequence. l.13938 ...\LinkA{promise}{promise}}, \code{\LinkA {closure}{closure}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13939 \end{SeeAlso} ! Undefined control sequence. l.13940 \HeaderA {Foreign}{Foreign Function Interface}{Foreign} ! Undefined control sequence. l.13941 \aliasA {.C}{Foreign}{.C} ! Undefined control sequence. l.13942 \aliasA {.Fortran}{Foreign}{.Fortran} ! Undefined control sequence. l.13943 \keyword {programming}{Foreign} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13945 \begin{Description} \relax ! Undefined control sequence. l.13946 ...piled code that has been loaded into \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13947 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13949 \begin{Usage} Overfull \hbox (1.49698pt too wide) in paragraph at lines 13953--13953 [] \OT1/cmtt/m/n/10 .C(.NAME, ..., NAOK = FALSE, DUP = TRUE, PACKAGE, ENC ODING)[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 13953--13953 [] \OT1/cmtt/m/n/10 .Fortran(.NAME, ..., NAOK = FALSE, DUP = TRUE, PACKAGE, ENC ODING)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13954 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13956 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.13957 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13958 \item[\code{.NAME}] a character string giving the name of a C functi... ! Undefined control sequence. l.13960 \code {"\LinkA{NativeSymbolInfo}{NativeSymbolInfo}"}, \code{"\LinkA{R... ! Undefined control sequence. l.13960 \code{"\LinkA {NativeSymbolInfo}{NativeSymbolInfo}"}, \code{"\LinkA{R... ! Undefined control sequence. l.13960 ...eSymbolInfo}{NativeSymbolInfo}"}, \code {"\LinkA{RegisteredNativeS... ! Undefined control sequence. l.13960 ...nfo}{NativeSymbolInfo}"}, \code{"\LinkA {RegisteredNativeSymbol}{R... ! Undefined control sequence. l.13961 or \code {"\LinkA{NativeSymbol}{NativeSymbol}"} referring to such a n... ! Undefined control sequence. l.13961 or \code{"\LinkA {NativeSymbol}{NativeSymbol}"} referring to such a n... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13962 \item[\code{...}] arguments to be passed to the foreign function. U... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13963 \item[\code{NAOK}] if \code{TRUE} then any \code{\LinkA{NA}{NA}} or ! Undefined control sequence. l.13963 \item[\code{NAOK}] if \code {TRUE} then any \code{\LinkA{NA}{NA}} or ! Undefined control sequence. l.13963 ...de{NAOK}] if \code{TRUE} then any \code {\LinkA{NA}{NA}} or ! Undefined control sequence. l.13963 ...}] if \code{TRUE} then any \code{\LinkA {NA}{NA}} or ! Undefined control sequence. l.13964 \code {\LinkA{NaN}{NaN}} or \code{\LinkA{Inf}{Inf}} values in the arg... ! Undefined control sequence. l.13964 \code{\LinkA {NaN}{NaN}} or \code{\LinkA{Inf}{Inf}} values in the arg... ! Undefined control sequence. l.13964 \code{\LinkA{NaN}{NaN}} or \code {\LinkA{Inf}{Inf}} values in the arg... ! Undefined control sequence. l.13964 \code{\LinkA{NaN}{NaN}} or \code{\LinkA {Inf}{Inf}} values in the arg... ! Undefined control sequence. l.13965 ...d on to the foreign function. If \code {FALSE}, the presence of ! Undefined control sequence. l.13966 \code {NA} or \code{NaN} or \code{Inf} values is regarded as an error. ! Undefined control sequence. l.13966 \code{NA} or \code {NaN} or \code{Inf} values is regarded as an error. ! Undefined control sequence. l.13966 \code{NA} or \code{NaN} or \code {Inf} values is regarded as an error. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13967 \item[\code{PACKAGE}] if supplied, confine the search for a characte... ! Undefined control sequence. l.13968 \code {.NAME} to the DLL given by this argument (plus the ! Undefined control sequence. l.13969 conventional extension, \file {.so}, \file{.dll}, \dots). ! Undefined control sequence. l.13969 conventional extension, \file{.so}, \file {.dll}, \dots). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13975 \item[\code{DUP, ENCODING}] For back-compatibility, accepted but ign... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13976 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13977 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13979 \begin{Details} \relax ! Undefined control sequence. l.13981 code. Later interfaces are \code {\LinkA{.Call}{.Call}} and ! Undefined control sequence. l.13981 code. Later interfaces are \code{\LinkA {.Call}{.Call}} and ! Undefined control sequence. l.13982 \code {\LinkA{.External}{.External}} which are more flexible and have... ! Undefined control sequence. l.13982 \code{\LinkA {.External}{.External}} which are more flexible and have... [139] [110> ! Undefined control sequence. l.13985 These functions are \LinkA {primitive}{primitive}, and \code{.NAME} i... ! Undefined control sequence. l.13985 ...\LinkA{primitive}{primitive}, and \code {.NAME} is always ! Undefined control sequence. l.13987 The other named arguments follow \code {...} and so cannot be ! Undefined control sequence. l.13989 passed to \code {...} that match or partially match \code{.NAME}. ! Undefined control sequence. l.13989 .....} that match or partially match \code {.NAME}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13990 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13992 \begin{Value} ! Undefined control sequence. l.13993 A list similar to the \code {...} list of arguments passed in ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13996 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.13998 \begin{Section} {Argument types} ! Undefined control sequence. l.13999 The mapping of the types of \R {} arguments to C or Fortran arguments is ! Undefined control sequence. l.14002 \Tabular {lll}{ ! Undefined control sequence. l.14003 \R {} & C & Fortran\\{} ! Misplaced alignment tab character &. l.14003 \R{} & C & Fortran\\{} ! Misplaced alignment tab character &. l.14003 \R{} & C & Fortran\\{} ! Misplaced alignment tab character &. l.14004 integer & int * & integer\\{} ! Misplaced alignment tab character &. l.14004 integer & int * & integer\\{} ! Misplaced alignment tab character &. l.14005 numeric & double * & double precision\\{} ! Misplaced alignment tab character &. l.14005 numeric & double * & double precision\\{} ! Misplaced alignment tab character &. l.14006 -- or -- & float * & real\\{} ! Misplaced alignment tab character &. l.14006 -- or -- & float * & real\\{} ! Misplaced alignment tab character &. l.14007 complex & Rcomplex * & double complex\\{} ! Misplaced alignment tab character &. l.14007 complex & Rcomplex * & double complex\\{} ! Misplaced alignment tab character &. l.14008 logical & int * & integer \\{} ! Misplaced alignment tab character &. l.14008 logical & int * & integer \\{} ! Misplaced alignment tab character &. l.14009 character & char ** & [see below]\\{} ! Misplaced alignment tab character &. l.14009 character & char ** & [see below]\\{} ! Misplaced alignment tab character &. l.14010 raw & unsigned char * & not allowed\\{} ! Misplaced alignment tab character &. l.14010 raw & unsigned char * & not allowed\\{} ! Misplaced alignment tab character &. l.14011 list & SEXP *& n [72]ot allowed\\{} ! Misplaced alignment tab character &. l.14011 list & SEXP *& not allowed\\{} ! Misplaced alignment tab character &. l.14012 other & SEXP& not allowed\\{} ! Misplaced alignment tab character &. l.14012 other & SEXP& not allowed\\{} Underfull \hbox (badness 10000) in paragraph at lines 14002--14014 ! Undefined control sequence. l.14015 ...te:} The C types corresponding to \code {integer} and ! Undefined control sequence. l.14016 \code {logical} are \code{int}, not \code{long} as in S. This ! Undefined control sequence. l.14016 \code{logical} are \code {int}, not \code{long} as in S. This ! Undefined control sequence. l.14016 \code{logical} are \code{int}, not \code {long} as in S. This ! Undefined control sequence. l.14017 ...s on most 64-bit platforms, where \code {int} is ! Undefined control sequence. l.14018 32-bit and \code {long} is 64-bit (but not on 64-bit Windows). ! Undefined control sequence. l.14020 ...The Fortran type corresponding to \code {logical} is ! Undefined control sequence. l.14021 \code {integer}, not \code{logical}: the difference matters on some ! Undefined control sequence. l.14021 \code{integer}, not \code {logical}: the difference matters on some ! Undefined control sequence. l.14024 Numeric vectors in \R {} will be passed as type \code{double *} to C ! Undefined control sequence. l.14024 ...rs in \R{} will be passed as type \code {double *} to C ! Undefined control sequence. l.14025 (and as \code {double precision} to Fortran) unless the argument has ! Undefined control sequence. l.14026 attribute \code {Csingle} set to \code{TRUE} (use ! Undefined control sequence. l.14026 attribute \code{Csingle} set to \code {TRUE} (use ! Undefined control sequence. l.14027 \code {\LinkA{as.single}{as.single}} or \code{\LinkA{single}{single}}... ! Undefined control sequence. l.14027 \code{\LinkA {as.single}{as.single}} or \code{\LinkA{single}{single}}... ! Undefined control sequence. l.14027 ...{\LinkA{as.single}{as.single}} or \code {\LinkA{single}{single}}).... ! Undefined control sequence. l.14027 ...{as.single}{as.single}} or \code{\LinkA {single}{single}}). This ... ! Undefined control sequence. l.14031 The C type \code {Rcomplex} is defined in \file{Complex.h} as a ! Undefined control sequence. l.14031 ...ype \code{Rcomplex} is defined in \file {Complex.h} as a ! Undefined control sequence. l.14032 \code {typedef struct \{double r; double i;\}}. It may or may not be ! Undefined control sequence. l.14033 equivalent to the C99 \code {double complex} type, depending on the ! Undefined control sequence. l.14036 Logical values are sent as \code {0} (\code{FALSE}), \code{1} ! Undefined control sequence. l.14036 Logical values are sent as \code{0} (\code {FALSE}), \code{1} ! Undefined control sequence. l.14036 ... sent as \code{0} (\code{FALSE}), \code {1} ! Undefined control sequence. l.14037 (\code {TRUE}) or \code{INT\_MIN = -2147483648} (\code{NA}, but only if ! Undefined control sequence. l.14037 (\code{TRUE}) or \code {INT\_MIN = -2147483648} (\code{NA}, but only if ! Undefined control sequence. l.14037 ...or \code{]INT\_MIN = -2147483648} (\code {NA}, but only if ! Undefined control sequence. l.14038 \code {NAOK = TRUE}), and the compiled code should return one of these ! Undefined control sequence. l.14039 ...owever non-zero values other than \code {INT\_MIN} are ! Undefined control sequence. l.14040 mapped to \code {TRUE}. ! Undefined control sequence. l.14042 Missing (\code {NA}) string values are passed to \code{.C} as the string ! Undefined control sequence. l.14042 ...{NA}) string values are passed to \code {.C} as the string ! Undefined control sequence. l.14043 "NA". As the C \code {char} type can represent all possible bit patterns ! Undefined control sequence. l.14045 string \code {"NA"}. If this distinction is important use \code{\Lin... ! Undefined control sequence. l.14045 ...this distinction is important use \code {\LinkA{.Call}{.Call}}. ! Undefined control sequence. l.14045 ...stinction is important use \code{\LinkA {.Call}{.Call}}. ! Undefined control sequence. l.14047 \code {.Fortran} passes the first (only) character string of a ! Undefined control sequence. l.14049 as \code {character*255} if its true length is passed separately. Only ! Undefined control sequence. l.14054 Lists, functions are other \R {} objects can (for historical reasons) be ! Undefined control sequence. l.14055 passed to \code {.C}, but the \code{\LinkA{.Call}{.Call}} interface i... ! Undefined control sequence. l.14055 passed to \code{.C}, but the \code {\LinkA{.Call}{.Call}} interface i... ! Undefined control sequence. l.14055 passed to \code{.C}, but the \code{\LinkA {.Call}{.Call}} interface i... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14059 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14061 \begin{Section} {Fortran symbol names} ! Undefined control sequence. l.14062 ...pilers known to be usable to compile \R {} map symbol names ! Undefined control sequence. l.14063 to lower case, and so does \code {.Fortran}. [140 [73]] Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. If @texttt R_ini t_mypkg[] @textrm calls @texttt R_ [111 ! Undefined control sequence. l.14068 ... Such names will often work with \code {.Fortran} (since ! Undefined control sequence. l.14069 ...they are translated is detected when \R {} is built and the ! Undefined control sequence. l.14070 information used by \code {.Fortran}), but portable code should not use ! Undefined control sequence. l.14073 Use \code {.Fortran} with care for compiled Fortran 9x code: it may not ! Undefined control sequence. l.14075 compiler used when configuring \R {}, especially if the subroutine name ! Undefined control sequence. l.14077 \code {.C} and do any necessary symbol-name translation yourself. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14078 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14080 \begin{Section} {Copying of arguments} ! Undefined control sequence. l.14090 \code {\LinkA{options}{options}(CBoundsCheck = TRUE)}. In that case ... ! Undefined control sequence. l.14090 \code{\LinkA {options}{options}(CBoundsCheck = TRUE)}. In that case ... ! Undefined control sequence. l.14094 these are unaltered. For \code {.C}, each element of a character ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14096 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14098 \begin{Note} \relax ! Undefined control sequence. l.14100 \code {PACKAGE} (to confine the search to a single DLL) or pass ! Undefined control sequence. l.14101 \code {.NAME} as one of the native symbol objects. Searching for ! Undefined control sequence. l.14104 You may see \code {PACKAGE = "base"} for symbols linked into \R{}. Do ! Undefined control sequence. l.14104 ...GE = "base"} for symbols linked into \R {}. Do ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14107 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14109 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14113 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.14115 \begin{SeeAlso} \relax ! Undefined control sequence. l.14116 \code {\LinkA{dyn.load}{dyn.load}}, \code{\LinkA{.Call}{.Call}}. ! Undefined control sequence. l.14116 \code{\LinkA {dyn.load}{dyn.load}}, \code{\LinkA{.Call}{.Call}}. ! Undefined control sequence. l.14116 \code{\LinkA{dyn.load}{dyn.load}}, \code {\LinkA{.Call}{.Call}}. ! Undefined control sequence. l.14116 ...inkA{dyn.load}{dyn.load}}, \code{\LinkA {.Call}{.Call}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14119 \end{SeeAlso} ! Undefined control sequence. l.14120 \HeaderA {formals}{Access to and Manipulation of the Formal Arguments... ! Undefined control sequence. l.14121 \aliasA {formals<\Rdash{}}{formals}{formals<.Rdash.} ! Undefined control sequence. l.14121 \aliasA{formals<\Rdash {}}{formals}{formals<.Rdash.} ! Undefined control sequence. l.14122 \keyword {programming}{formals} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14124 \begin{Description} \relax ! Undefined control sequence. l.14125 Get or set the formal arguments of a \code {\LinkA{function}{function}}. ! Undefined control sequence. l.14125 ... the formal arguments of a \code{\LinkA {function}{function}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14126 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14128 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14133 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14135 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14136 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14137 \item[\code{fun}] a \code{\LinkA{function}{function}}, or see `Detai... ! Undefined control sequence. l.14137 \item[\code{fun}] a \code {\LinkA{function}{function}}, or see `Detai... ! Undefined control sequence. l.14137 \item[\code{fun}] a \code{\LinkA {function}{function}}, or see `Detai... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14138 \item[\code{envir}] \code{\LinkA{environment}{environment}} in which... ! Undefined control sequence. l.14138 \item[\code{envir}] \code {\LinkA{environment}{environment}} in which... ! Undefined control sequence. l.14138 \item[\code{envir}] \code{\LinkA {environment}{environment}} in which... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14139 \item[\code{value}] a \code{\LinkA{list}{list}} (or \code{\LinkA{pai... ! Undefined control sequence. l.14139 \item[\code{value}] a \code {\LinkA{list}{list}} (or \code{\LinkA{pai... ! Undefined control sequence. l.14139 \item[\code{value}] a \code{\LinkA {list}{list}} (or \code{\LinkA{pai... ! Undefined control sequence. l.14139 ...] a \code{\LinkA{list}{list}} (or \code {\LinkA{pairlist}{pairlist... ! Undefined control sequence. l.14139 ...de{\LinkA{list}{list}} (or \code{\LinkA {pairlist}{pairlist}}) of ... ! Undefined control sequence. l.14139 ...code{\LinkA{pairlist}{pairlist}}) of \R {} expressions. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14140 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14141 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14143 \begin{Details} \relax ! Undefined control sequence. l.14144 For the first form, \code {fun} can also be a character string naming ! Undefined control sequence. l.14146 ...t specified, the function calling \code {formals} is ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14150 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14152 \begin{Value} ! Undefined control sequence. l.14153 \code {formals} returns the formal argument list of the function ! Undefined control sequence. l.14154 specified, as a \code {\LinkA{pairlist}{pairlist}}, or \code{NULL} for a ! Undefined control sequence. l.14154 specified, as a \code{\LinkA {pairlist}{pairlist}}, or \code{NULL} for a ! Undefined control sequence. l.14154 ...e{\LinkA{pairlist}{pairlist}}, or \code {NULL} for a ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14160 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14162 \begin{SeeAlso} \relax ! Undefined control sequence. l.14163 \code {\LinkA{formalArgs}{formalArgs}} (from \pkg{methods}), a shortc... ! Undefined control sequence. l.14163 \code{\LinkA {formalArgs}{formalArgs}} (from \pkg{methods}), a shortc... ! Undefined control sequence. l.14163 ...nkA{formalArgs}{formalArgs}} (from \pkg {methods}), a shortcut for... ! Undefined control sequence. l.14163 ...om \pkg{methods}), a shortcut for \code {names(formals(.))}. ! Undefined control sequence. l.14164 \code {\LinkA{args}{args}} for a human-readable version, ! Undefined control sequence. l.14164 \code{\LinkA {args}{args}} for a human-readable version, ! Undefined control sequence. l.14165 \code {\LinkA{alist}{alist}}, ! Undefined control sequence. l.14165 \code{\LinkA {alist}{alist}}, ! Undefined control sequence. l.14166 \code {\LinkA{body}{body}}, ! Undefined control sequence. l.14166 \code{\LinkA {body}{body}}, ! Undefined control sequence. l.14167 \code {\LinkA{function}{function}}. ! Undefined control sequence. l.14167 \code{\LinkA {function}{function}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14168 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14170 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14171 \begin{ExampleCode} [141 [74 [112]] ! You can't use `macro parameter character #' in vertical mode. l.14175 # # If you just want the names of the arguments, use formalArgs instead. ! You can't use `macro parameter character #' in vertical mode. l.14175 ## If you just want the names of the arguments, use formalArgs instead. ! You can't use `macro parameter character #' in horizontal mode. l.14177 methods:: formalArgs(lm) # same ! You can't use `macro parameter character #' in vertical mode. l.14179 # # formals returns a pairlist. Arguments with no default have type s... ! You can't use `macro parameter character #' in vertical mode. l.14179 ## formals returns a pairlist. Arguments with no default have type s... ! You can't use `macro parameter character #' in vertical mode. l.14182 # # formals returns NULL for primitive functions. Use it in combinat... ! You can't use `macro parameter character #' in vertical mode. l.14182 ## formals returns NULL for primitive functions. Use it in combinat... ! You can't use `macro parameter character #' in horizontal mode. l.14183 # # args for this case. ! You can't use `macro parameter character #' in horizontal mode. l.14183 ## args for this case. ! You can't use `macro parameter character #' in vertical mode. l.14188 # # You can overwrite the formal arguments of a function (though this is ! You can't use `macro parameter character #' in vertical mode. l.14188 ## You can overwrite the formal arguments of a function (though this is ! You can't use `macro parameter character #' in horizontal mode. l.14189 # # advanced, dangerous coding). ! You can't use `macro parameter character #' in horizontal mode. l.14189 ## advanced, dangerous coding). ! You can't use `macro parameter character #' in horizontal mode. l.14192 f # function(a, b = 3) a + b ! You can't use `macro parameter character #' in horizontal mode. l.14193 f(2) # result = 5 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14194 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14195 \end{Examples} ! Undefined control sequence. l.14196 \HeaderA {format}{Encode in a Common Format}{format} ! Undefined control sequence. l.14197 \methaliasA {format.AsIs}{format}{format.AsIs} ! Undefined control sequence. l.14198 \methaliasA {format.data.frame}{format}{format.data.frame} ! Undefined control sequence. l.14199 \methaliasA {format.default}{format}{format.default} ! Undefined control sequence. l.14200 \methaliasA {format.factor}{format}{format.factor} ! Undefined control sequence. l.14201 \keyword {character}{format} ! Undefined control sequence. l.14202 \keyword {print}{format} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14204 \begin{Description} \relax ! Undefined control sequence. l.14205 Format an \R {} object for pretty printing. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14206 \end{Description} ] ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14208 \begin{Usage} Underfull \hbox (badness 2285) in paragraph at lines 14188--14209 \OT1/cmr/m/n/10 for-mat.defaultformatformat.default for-mat.factorformatformat. factor char-ac- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14230 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14232 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14233 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14234 \item[\code{x}] any \R{} object (conceptually); typically numeric. ! Undefined control sequence. l.14234 \item[\code{x}] any \R {} object (conceptually); typically numeric. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14236 \item[\code{trim}] logical; if \code{FALSE}, logical, numeric and co... ! Undefined control sequence. l.14236 \item[\code{trim}] logical; if \code {FALSE}, logical, numeric and co... ! Undefined control sequence. l.14237 ...t-justified to a common width: if \code {TRUE} the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14240 \item[\code{digits}] how many significant digits are to be used for ! Undefined control sequence. l.14241 numeric and complex \code {x}. The default, \code{NULL}, uses ! Undefined control sequence. l.14241 ...d complex \code{x}. The default, \code {NULL}, uses ! Undefined control sequence. l.14242 \code {\LinkA{getOption}{getOption}("digits")}. This is a suggestion... ! Undefined control sequence. l.14242 \code{\LinkA {getOption}{getOption}("digits")}. This is a suggestion... ! Undefined control sequence. l.14244 ...icant digits, and also to satisfy \code {nsmall}. ! Undefined control sequence. l.14245 ...pretation for complex numbers see \code {\LinkA{signif}{signif}}.) ! Undefined control sequence. l.14245 ...on for complex numbers see \code{\LinkA {signif}{signif}}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [75 l.14247 \item[\code{nsmall}] the minimum number of digits to the right of th... ! Undefined control sequence. l.14249 Allowed values are \code {0 <= nsmall <= 20}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14251 \item[\code{justify}] should a \emph{character} vector be left-justi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14254 \item[\code{width}] \code{default} method: the \emph{minimum} field ... ! Undefined control sequence. l.14254 \item[\code{width}] \code {default} method: the \emph{minimum} field ... ! Undefined control sequence. l.14255 \code {NULL} or \code{0} for no restriction. ! Undefined control sequence. l.14255 \code{NULL} or \code {0} for no restriction. ! Undefined control sequence. l.14257 \code {AsIs} method: the \emph{maximum} field width for non-character ! Undefined control sequence. l.14258 objects. \code {NULL} corresponds to the default \code{12}. ! Undefined control sequence. l.14258 ...{NULL} corresponds to the default \code {12}. [142 [113]]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14261 \item[\code{na.encode}] logical: should \code{NA} strings be encoded... ! Undefined control sequence. l.14261 ...\code{na.encode}] logical: should \code {NA} strings be encoded? ... ! Undefined control sequence. l.14263 complex nor logical \code {NA}s, which are always encoded as \code{"N... ! Undefined control sequence. l.14263 ...NA}s, which are always encoded as \code {"NA"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14266 \item[\code{scientific}] Either a logical specifying whether ! Undefined control sequence. l.14268 format, or an integer penalty (see \code {\LinkA{options}{options}("s... ! Undefined control sequence. l.14268 ...or an integer penalty (see \code{\LinkA {options}{options}("scipen... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14271 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14274 ...cimal.mark, zero.print, drop0trailing}] ! Undefined control sequence. l.14276 Passed to \code {\LinkA{prettyNum}{prettyNum}}: that help page explai... ! Undefined control sequence. l.14276 Passed to \code{\LinkA {prettyNum}{prettyNum}}: that help page explai... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14277 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14278 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14280 \begin{Details} \relax ! Undefined control sequence. l.14281 \code {format} is a generic function. Apart from the methods described ! Undefined control sequence. l.14282 ... there are methods for dates (see \code {\LinkA{format.Date}{forma... ! Undefined control sequence. l.14282 ...are methods for dates (see \code{\LinkA {format.Date}{format.Date}}), ! Undefined control sequence. l.14283 date-times (see \code {\LinkA{format.POSIXct}{format.POSIXct}})) and ... ! Undefined control sequence. l.14283 date-times (see \code{\LinkA Underfull \hbox (badness 10000) in paragraph at lines 6412--6415 @textrm and these can be ac-cessed from R via the pack-age [][]@textbf rggobi[] []@textrm , de-scribed at Chapter 13 [76 {format.POSIXct}{format.POSIXct}})) and ... ! Undefined control sequence. l.14284 as \code {format.octmode} and \code{format.dist}. ! Undefined control sequence. l.14284 as \code{format.octmode} and \code {format.dist}. Underfull \hbox (badness 1092) in paragraph at lines 14275--14285 \OT1/cmr/m/n/10 pret-tyNumpret-tyNum: that help page ex-plains the de-tails. for- ! Undefined control sequence. l.14286 \code {format.data.frame} formats the data frame column by column, ! Undefined control sequence. l.14287 applying the appropriate method of \code {format} for each column. ! Undefined control sequence. l.14288 ... for columns are often similar to \code {as.character} but offer ! Undefined control sequence. l.14291 will be given class \code {"\LinkA{AsIs}{AsIs}"}. ! Undefined control sequence. l.14291 will be given class \code{"\LinkA {AsIs}{AsIs}"}. ! Undefined control sequence. l.14293 \code {format.factor} converts the factor to a character vector and ! Undefined control sequence. l.14294 ... calls the default method (and so \code {justify} applies). ! Undefined control sequence. l.14296 \code {format.AsIs} deals with columns of complicated objects that ! Undefined control sequence. l.14298 ...sed to the default method (and so \code {width} does ! Undefined control sequence. l.14300 Otherwise it calls \code {\LinkA{toString}{toString}} to convert the ... ! Undefined control sequence. l.14300 Otherwise it calls \code{\LinkA {toString}{toString}} to convert the ... ! Undefined control sequence. l.14306 \code {\LinkA{nchar}{nchar}}), taking double-width characters and the... ! Undefined control sequence. l.14306 \code{\LinkA {nchar}{nchar}}), taking double-width characters and the... ! Undefined control sequence. l.14308 backslash but not double quote: see \code {\LinkA{print.default}{prin... ! Undefined control sequence. l.14308 ... but not double quote: see \code{\LinkA {print.default}{print.defa... ! Undefined control sequence. l.14309 ...Thus the width is as displayed by \code {print(quote = ! Undefined control sequence. l.14310 FALSE)} and not as displayed by \code {\LinkA{cat}{cat}}. Characte... ! Undefined control sequence. l.14310 ...)} and not as displayed by \code{\LinkA {cat}{cat}}. Character st... ! Undefined control sequence. l.14312 \code {na.encode = FALSE} missing character strings are not included in ! Undefined control sequence. l.14316 ... all the elements to at least the \code {digits} ! Undefined control sequence. l.14319 \code {nsmall} is reached or at least one ! Undefined control sequence. l.14321 documentation for \code {big.*}, \code{small.*} etc, above. See the ! Undefined control sequence. l.14321 documentation for \code{big.*}, \code {small.*} etc, above. See the ! Undefined control sequence. l.14322 note in \code {\LinkA{print.default}{print.default}} about \code{digi... ! Undefined control sequence. l.14322 note in \code{\LinkA {print.default}{print.default}} about \code{digi... ! Undefined control sequence. l.14322 ...nt.default}{print.default}} about \code {digits >= 16}. ! Undefined c]ontrol sequence. l.14325 by \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.14325 by \code{\LinkA {as.character}{as.character}}. ! Undefined control sequence. l.14328 \code {\LinkA{getOption}{getOption}("OutDec")} for the `decimal mark'... ! Undefined control sequence. l.14328 \code{\LinkA {getOption}{getOption}("OutDec")} for the `decimal mark'... ! Undefined control sequence. l.14329 this is set to something other than \code {"."} then it takes precedence ! Undefined control sequence. l.14330 over argument \code {decimal.mark}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14331 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14333 \begin{Value} ! Undefined control sequence. l.14334 An object of similar structure to \code {x} containing character ! Undefined control sequence. l.14335 ...he elements of the first argument \code {x} ! Undefined control sequence. l.14338 ...acter, numeric, complex or factor \code {x}, dims and dimnames [143 Overfull \hbox (30.03963pt too wide) in paragraph at lines 9771--9771 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [114]] ! Undefined control sequence. l.14342 If \code {x} is a list, the result is a character vector obtained by ! Undefined control sequence. l.14343 applying \code {format.default(x, ...)} to each element of the list ! Undefined control sequence. l.14344 (after \code {\LinkA{unlist}{unlist}}ing elements which are themselve... ! Undefined control sequence. l.14344 (after \code{\LinkA {unlist}{unlist}}ing elements which are themselve... ! Undefined control sequence. l.14346 \code {paste(collapse = ", ")}. The defaults in this case are ! Undefined control sequence. l.14347 \code {trim = TRUE, justify = "none"} since one does not usually want ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14349 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14351 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14355 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14357 \begin{SeeAlso} \relax ! Undefined control sequence. l.14358 \code {\LinkA{format.info}{format.info}} indicates how an atomic vect... ! Undefined control sequence. l.14358 \code{\LinkA {format.info}{format.info}} indicates how an atomic vect... ! Undefined control sequence. l.14361 \code {\LinkA{formatC}{formatC}}, \code{\LinkA{paste}{paste}}, \code{... ! Undefined control sequence. l.14361 \code{\LinkA {formatC}{formatC}}, \code{\LinkA{paste}{paste}}, \code{... ! Undefined control sequence. l.14361 \code{\LinkA{formatC}{formatC}}, \code {\LinkA{paste}{paste}}, \code{... ! Undefined control sequence. l.14361 ...\LinkA{formatC}{formatC}}, \code{\LinkA {paste}{paste}}, \code{\Li... ! Undefined control sequence. l.14361 ...C}}, \code{\LinkA{paste}{paste}}, \code {\LinkA{as.character}{as.c... ! Undefined control sequence. l.14361 ...ode{\LinkA{paste}{paste}}, \code{\LinkA {as.character}{as.characte... ! Undefined control sequence. l.14362 \code {\LinkA{sprintf}{sprintf}}, \code{\LinkA{print}{print}}, \code{... ! Undefined control sequence. l.14362 \code{\LinkA {sprintf}{sprintf}}, \code{\LinkA{print}{print}}, \code{... ! Undefined control sequence. l.14362 \code{\LinkA{sprintf}{sprintf}}, \code {\LinkA{print}{print}}, \code{... ! Undefined control sequence. l.14362 ...\LinkA{sprintf}{sprintf}}, \code{\LinkA {print}{print}}, \code{\Li... ! Undefined control sequence. l.14362 ...f}}, \code{\LinkA{print}{print}}, \code {\LinkA{prettyNum}{prettyN... ! Undefined control sequence. l.14362 ...ode{\LinkA{print}{print}}, \code{\LinkA {prettyNum}{prettyNum}}, ! Undefined control sequence. l.14363 \code {\LinkA{toString}{toString}}, \code{\LinkA{encodeString}{encode... ! Undefined control sequence. l.14363 \code{\LinkA {toString}{toString}}, \code{\LinkA{encodeString}{encode... ! Undefined control sequence. l.14363 \code{\LinkA{toString}{toString}}, \code {\LinkA{encodeString}{encode... ! Undefined control sequence. l.14363 ...inkA{toString}{toString}}, \code{\LinkA {encodeString}{encodeStrin... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14364 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14366 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14367 \begin{ExampleCode} Underfull \hbox (badness 4531) in paragraph at lines 14361--14370 \OT1/cmr/m/n/10 print, pret-tyNumpret-tyNum, toString-toString, en-code-Strin-g en-code-String. ! You can't use `macro parameter character #' in vertical mode. l.14375 # # use of nsmall ! You can't use `macro parameter character #' in vertical mode. l.14375 ## use of nsmall ! You can't use `macro parameter character #' in vertical mode. l.14381 # # use of scientific ! You can't use `macro parameter character #' in vertical mode. l.14381 ## use of scientific ! Missing $ inserted. $ l.14382 format(2^ 31-1) ! Missing $ inserted. $ l.14384 ! You can't use `macro parameter character #' in vertical mode. l.14385 # # a list ! You can't use `macro parameter character #' in vertical mode. l.14385 ## a list ! Missing $ inserted. $ l.14386 z <- list(a = letters[1:3], b = (-pi+0i)^ ((-2:2)/2), c = c(1,10,100,... ! You can't use `macro parameter character #' in math mode. l.14389 # # can you find the "2" small differences? ! You can't use `macro parameter character #' in math mode. l.14389 ## can you find the "2" small differences? ! You can't use `macro parameter character #' in math mode. l.14392 f1 == f2 # # 2 FALSE, 4 TRUE ! You can't use `macro parameter character #' in math mode. l.14392 f1 == f2 ## 2 FALSE, 4 TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14393 \end{ExampleCode} ! Missing $ inserted. $ l.14393 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14394 \end{Examples} ! Undefined control sequence. l.14395 \HeaderA {format.info}{format(.) Information}{format.info} ! Undefined control sequence. l.14396 \keyword {character}{format.info} ! Undefined control sequence. l.14397 \keyword {print}{format.info} ! Undefined control sequence. l.14398 \keyword {programming}{format.info} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14400 \begin{Description} \relax ! Undefined control sequence. l.14401 Information is returned on how \code {\LinkA{format}{format}(x, digit... ! Undefined control sequence. l.14401 ...rmation is returned on how \code{\LinkA {format}{format}(x, digits... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14403 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14405 \begin{Usage} Underfull \hbox (badness 2961) in paragraph at lines 14385--14406 []\OT1/cmr/m/n/10 a list z <- list(a = let-ters[1:3], b = (-pi+0i)$[](\OMS/cmsy /m/n/10 ^^@\OT1/cmr/m/n/10 2 : 2)\OML/cmm/m/it/10 =\OT1/cmr/m/n/10 2)\OML/cmm/m /it/10 ; c \OT1/cmr/m/n/10 = Underfull \hbox (badness 5652) in paragraph at lines 14385--14406 \OML/cmm/m/it/10 b\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; e \OT1/cmr/m/n/10 = \OML/ cmm/m/it/10 expression\OT1/cmr/m/n/10 (1 + \OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )) \OML/cmm/m/it/10 canyoufindthe\OT1/cmr/m/n/10 "2"\OML/cmm/m/it/10 smalldifferen ces\OT1/cmr/m/n/10 ?(\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 1 \OML/cmm/m/it/10 < Underfull \hbox (badness 3547) in paragraph at lines 14385--14406 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 format\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 z; digits \OT1/cmr/m/n/10 = 2))(\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 2 \OML/cmm/m/it /10 < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 format\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 z; digits \OT1/cmr/m/n/10 = 2\OML/cmm/m/it/10 ; justify \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14409 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14411 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14412 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14413 \item[\code{x}] an atomic vector; a potential argument of ! Undefined control sequence. l.14414 \code {\LinkA{format}{format}(x, ...)}. ! Undefined control sequence. l.14414 \code{\LinkA {format}{format}(x, ...)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14415 \item[\code{digits}] how many significant digits are to be used for ! Undefined control sequence. l.14416 num [77eric and complex \code {x}. The default, \code{NULL}, uses ! Undefined control sequence. l.14416 ...d complex \code{x}. The default, \code {NULL}, uses ! Undefined control sequence. l.14417 \code {\LinkA{getOption}{getOption}("digits")}. ! Undefined control sequence. l.14417 \code{\LinkA {getOption}{getOption}("digits")}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14418 \item[\code{nsmall}] (see \code{\LinkA{format}{format}(..., nsmall)}). ! Undefined control sequence. l.14418 \item[\code{nsmall}] (see \code {\LinkA{format}{format}(..., nsmall)}). ! Undefined control sequence. l.14418 \item[\code{nsmall}] (see \code{\LinkA {format}{format}(..., nsmall)}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14419 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14420 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14422 \begin{Value} ! Undefined control sequence. l.14423 An \code {\LinkA{integer}{integer}} \code{\LinkA{vector}{vector}} of ... ! Undefined control sequence. l.14423 An \code{\LinkA {integer}{integer}} \code{\LinkA{vector}{vector}} of ... ! Undefined control sequence. l.14423 An \code{\LinkA{integer}{integer}} \code {\LinkA{vector}{vector}} of ... ! Undefined control sequence. l.14423 ...{\LinkA{integer}{integer}} \code{\LinkA {vector}{vector}} of lengt... ! Undefined control sequence. l.14424 \code {r}. ! Undefined control sequence. l.14427 the width which would be used by \code {format} if \code{width = NULL}. ! Undefined control sequence. l.14427 ...would be used by \code{format} if \code {width = NULL}. ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14430 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14431 \item[\code{r[1]}] width (in characters) used by \code{format(x)} ! Undefined control sequence. l.14431 ...]}] width (in characters) used by \code {format(x)} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14432 \item[\code{r[2]}] [115 number of digits after decimal point. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14433 \item[\code{r[3]}] in \code{0:2}; if \eqn{\ge}{}\code{1}, \emph{expo... ! Undefined control sequence. l.14433 \item[\code{r[3]}] in \code {0:2}; if \eqn{\ge}{}\code{1}, \emph{expo... ! Undefined control sequence. l.14433 \item[\code{r[3]}] in \code{0:2}; if \eqn {\ge}{}\code{1}, \emph{expo... ! Missing $ inserted. $ l.14433 ...\code{r[3]}] in \code{0:2}; if \eqn{\ge }{}\code{1}, \emph{exponen... ! Extra }, or forgotten $. l.14433 ...code{r[3]}] in \code{0:2}; if \eqn{\ge} {}\code{1}, \emph{exponent... ! Undefined control sequence. l.14433 ...3]}] in \code{0:2}; if \eqn{\ge}{}\code {1}, \emph{exponential} ! Undefined control sequence. l.14434 ... be used, with exponent length of \code {r[3]+1}. ! Missing $ inserted. $ l.14435 Overfull \hbox (22.00436pt too wide) in paragraph at lines 14433--14435 []\OT1/cmr/m/n/10 in 0:2; if $\OMS/cmsy/m/n/10 ^^U []\OT1/cmr/m/n/10 1\OML/cmm/ m/it/10 ; []representationwouldbeused; withexponentlengthof[]:$ ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14436 \end{ldescription} ! Missing } inserted. } l.14436 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14440 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14442 \begin{SeeAlso} \relax ! Undefined control sequence. l.14443 \code {\LinkA{format}{format}} (notably about \code{digits >= 16}), ! Undefined control sequence. l.14443 \code{\LinkA {format}{format}} (notably about \code{digits >= 16}), ! Undefined control sequence. l.14443 ...A{format}{format}} (notably about \code {digits >= 16}), ! Undefined control sequence. l.14444 \code {\LinkA{formatC}{formatC}}. ! Undefined control sequence. l.14444 \code{\LinkA {formatC}{formatC}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14445 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14447 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ]] l.14448 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.14449 ...tions("digits") ; options(digits = 7) # -- for the following ! You can't use `macro parameter character #' in horizontal mode. l.14450 format.info(123) # 3 0 0 ! You can't use `macro parameter character #' in horizontal mode. l.14451 format.info(pi) # 8 6 0 ! You can't use `macro parameter character #' in horizontal mode. l.14452 format.info(1e8) # 5 0 1 - exponential "1e+08" ! You can't use `macro parameter character #' in horizontal mode. l.14453 format.info(1e222) # 6 0 2 - exponential "1e+222" ! Missing $ inserted. $ l.14455 x <- pi*10^ c(-10,-2,0:2,8,20) ! Missing $ inserted. $ l.14459 Underfull \hbox (badness 10000) in paragraph at lines 14455--14459 []\OT1/cmr/m/n/10 x <- pi*10$[](\OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 10\OML/cmm/ m/it/10 ; \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; \OT1/cmr/m/n/ 10 0 : 2\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 8\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 20)\OML/cmm/m/it/10 names\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ) \ OML/cmm/m/it/10 < Underfull \hbox (badness 10000) in paragraph at lines 14455--14459 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 formatC\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x ; width \OT1/cmr/m/n/10 = 1\OML/cmm/m/it/10 ; digits \OT1/cmr/m/n/10 = 3\OML/cm m/m/it/10 ; format \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.14460 # # using at least 8 digits right of "." ! You can't use `macro parameter character #' in vertical mode. l.14460 ## using at least 8 digits right of "." ! You can't use `macro parameter character #' in vertical mode. l.14463 # Reset old options: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14465 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14466 \end{Examples} ! Undefined control sequence. l.14467 \HeaderA {format.pval}{Format P Values}{format.pval} ! Undefined control sequence. l.14468 \keyword {print}{format.pval} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14470 \begin{Description} \relax ! Undefined control sequence. l.14471 \code {format.pval} is intended for formatting p-values. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14472 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14474 \begin{Usage} [144 Chapter 14 [78]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14479 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14481 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14482 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14483 \item[\code{pv}] a numeric vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14484 \item[\code{digits}] how many significant digits are to be used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14485 \item[\code{eps}] a numerical tolerance: see `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14486 \item[\code{na.form}] character representation of \code{NA}s. ! Undefined control sequence. l.14486 ...orm}] character representation of \code {NA}s. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14487 \item[\code{...}] further arguments to be passed to \code{\LinkA{for... ! Undefined control sequence. l.14487 ...further arguments to be passed to \code {\LinkA{format}{format}} ! Undefined control sequence. l.14487 ... arguments to be passed to \code{\LinkA {format}{format}} ! Undefined control sequence. l.14488 such as \code {nsmall}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14489 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14490 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14492 \begin{Details} \relax ! Undefined control sequence. l.14493 \code {format.pval} is mainly an auxiliary function for ! Undefined control sequence. l.14494 \code {\LinkA{print.summary.lm}{print.summary.lm}} etc., and does sep... ! Undefined control sequence. l.14494 \code{\LinkA {print.summary.lm}{print.summary.lm}} etc., and does sep... ! Undefined control sequence. l.14496 \code {eps} are formatted as \code{"< [eps]"} (where `[eps]' ! Undefined control sequence. l.14496 \code{eps} are formatted as \code {"< [eps]"} (where `[eps]' ! Undefined control sequence. l.14497 stands for \code {format(eps, digits)}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14498 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14500 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14502 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14504 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14505 \begin{ExampleCode} ! Missing $ inserted. $ l.14506 format.pval(c(stats::runif(5), pi^ -100, NA)) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14508 \end{ExampleCode} ! Missing $ inserted. $ l.14508 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14509 \end{Examples} ! Undefined control sequence. l.14510 \HeaderA {formatC}{Formatting Using C-style Formats}{formatC} ! Undefined control sequence. l.14511 \aliasA {.format.zeros}{formatC}{.format.zeros} ! Undefined control sequence. l.14512 \aliasA {prettyNum}{formatC}{prettyNum} ! Undefined control sequence. l.14513 \keyword {character}{formatC} ! Undefined control sequence. l.14514 \keyword {print}{formatC} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14516 \begin{Description} \relax ! Undefined control sequence. l.14517 ...umbers individually and flexibly, \code {formatC()} using ! Undefined control sequence. l.14518 \code [79 [116 {C} style format specifications. Underfull \hbox (badness 2073) in paragraph at lines 14487--14519 \OT1/cmr/m/n/10 pi$[]100\OML/cmm/m/it/10 ; NA\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 format:pval\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 (0\OML/cmm/m/it/ 10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 0\OML/cmm/m/it/10 :\OT1 /cmr/m/n/10 0001\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 e \OMS/cms y/m/n/10 ^^@ \OT1/cmr/m/n/10 27))$ for-matC-For-mat-ting Us- ! Undefined control sequence. l.14520 \code {prettyNum()} is used for ``prettifying'' (possibly ! Undefined control sequence. l.14521 formatted) numbers, also in \code {\LinkA{format.default}{format.defa... ! Undefined control sequence. l.14521 formatted) numbers, also in \code{\LinkA {format.default}{format.defa... ! Undefined control sequence. l.14523 \code {.format.zeros()}, an auxiliary function of \code{prettyNum()} ! Undefined control sequence. l.14523 ...eros()}, an auxiliary function of \code {prettyNum()} ! Undefined control sequence. l.14524 re-formats the zeros in a vector \code {x} of formatted numbers. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14525 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14527 \begin{Usage} Overfull \hbox (43.49661pt too wide) in paragraph at lines 14545--14545 [] \OT1/cmtt/m/n/10 decimal.mark = getOption("OutDec"), input.d.mark = decimal.mark,[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 14545--14545 [] \OT1/cmtt/m/n/10 zero.print = NULL, drop0trailing = FALSE, is.cmplx = NA,[] Overfull \hbox (1.49698pt too wide) in paragraph at lines 14545--14545 []\OT1/cmtt/m/n/10 .format.zeros(x, zero.print, nx = suppressWarnings(as.numeri c(x)))[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14546 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14548 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14549 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14550 \item[\code{x}] an atomic numerical or character object, possibly ! Undefined control sequence. l.14551 \code {\LinkA{complex}{complex}} only for \code{prettyNum()}, typical... ! Undefined control sequence. l.14551 \code{\LinkA {complex}{complex}} only for \code{prettyNum()}, typical... ! Undefined control sequence. l.14551 ...LinkA{complex}{complex}} only for \code {prettyNum()}, typically a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14554 \item[\code{digits}] the desired number of digits after the decimal ! Undefined control sequence. l.14555 point (\code {format = "f"}) or \emph{significant} digits ! Undefined control sequence. l.14556 (\code {format = "g"}, \code{= "e"} or \code{= "fg"}). ! Undefined control sequence. l.14556 (\code{format = "g"}, \code {= "e"} or \code{= "fg"}). ! Undefined control sequence. l.14556 ...de{format = "g"}, \code{= "e"} or \code {= "fg"}). ! Undefined control sequence. l.14560 will be used with a warning unless \code {format = "f"} where it is [145]]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14566 \item[\code{width}] the total field width; if both \code{digits} and ! Undefined control sequence. l.14566 ...}] the total field width; if both \code {digits} and ! Undefined control sequence. l.14567 \code {width} are unspecified, \code{width} defaults to 1, ! Undefined control sequence. l.14567 \code{width} are unspecified, \code {width} defaults to 1, ! Undefined control sequence. l.14568 otherwise to \code {digits + 1}. \code{width = 0} will use ! Undefined control sequence. l.14568 otherwise to \code{digits + 1}. \code {width = 0} will use ! Undefined control sequence. l.14569 \code {width = digits}, \code{width < 0} means left ! Undefined control sequence. l.14569 \code{width = digits}, \code {width < 0} means left ! Undefined control sequence. l.14570 ...mber in this field (equivalent to \code {flag = "-"}). ! Undefined control sequence. l.14572 \code {width}. For character data this is interpreted in characters ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14576 \item[\code{format}] equal to \code{"d"} (for integers), \code{"f"}, ! Undefined control sequence. l.14576 \item[\code{format}] equal to \code {"d"} (for integers), \code{"f"}, ! Undefined control sequence. l.14576 ...al to \code{"d"} (for integers), \code {"f"}, ! Undefined control sequence. l.14577 \code {"e"}, \code{"E"}, \code{"g"}, \code{"G"}, \code{"fg"} (for ! Undefined control sequence. l.14577 \code{"e"}, \code {"E"}, \code{"g"}, \code{"G"}, \code{"fg"} (for ! Undefined control sequence. l.14577 \code{"e"}, \code{"E"}, \code {"g"}, \code{"G"}, \code{"fg"} (for ! Undefined control sequence. l.14577 \code{"e"}, \code{"E"}, \code{"g"}, \code {"G"}, \code{"fg"} (for ! Undefined control sequence. l.14577 ...ode{"E"}, \code{"g"}, \code{"G"}, \code {"fg"} (for ! Undefined control sequence. l.14578 reals), or \code {"s"} (for strings). Default is \code{"d"} for ! Undefined control sequence. l.14578 ...e{"s"} (for strings). Default is \code {"d"} for ! Undefined control sequence. l.14579 integers, \code {"g"} for reals. ! Undefined control sequence. l.14581 \code {"f"} gives numbers in the usual ! Undefined control sequence. l.14582 \code {xxx.xxx} format; \code{"e"} and \code{"E"} give \code{n.ddde+... ! Undefined control sequence. l.14582 \code{xxx.xxx} format; \code {"e"} and \code{"E"} give \code{n.ddde+... ! Undefined control sequence. l.14582 ...{xxx.xxx} format; \code{"e"} and \code {"E"} give \code{n.ddde+nn... ! Undefined control sequence. l.14582 ...; \code{"e"} and \code{"E"} give \code {n.ddde+nn} or ! Undefined control sequence. l.14583 \code {n.dddE+nn} (scientific format); \code{"g"} and \code{"G"} put ! Undefined control sequence. l.14583 ...e{n.dddE+nn} (scientific forma Underfull \hbox (badness 10000) in paragraph at lines 6647--6652 []@textrm Windows' UNC filepaths (such as `@texttt \\server\dir1\dir2\file[]@t extrm '[] and Underfull \hbox (badness 5189) in paragraph at lines 6647--6652 @textrm `@texttt \\?\UNC\server\dir1\dir2\file[]@textrm '[]) are not sup-porte d, but they may work in [80 [117t); \code {"g"} and \code{"G"} put ! Undefined control sequence. l.14583 ...cientific format); \code{"g"} and \code {"G"} put ! Undefined control sequence. l.14584 \code {x[i]} into scientific format only if it saves space to do so. ! Undefined control sequence. l.14586 \code {"fg"} uses fixed format as \code{"f"}, but \code{digits} as ! Undefined control sequence. l.14586 \code{"fg"} uses fixed format as \code {"f"}, but \code{digits} as ! Undefined control sequence. l.14586 ...s fixed format as \code{"f"}, but \code {digits} as ! Undefined control sequence. l.14589 \code {\LinkA{signif}{signif}} this prints large numbers with ! Undefined control sequence. l.14589 \code{\LinkA {signif}{signif}} this prints large numbers with ! Undefined control sequence. l.14590 more significant digits than \code {digits}. Trailing zeros are ! Undefined control sequence. l.14591 ...h{dropped} in this format, unless \code {flag} contains ! Undefined control sequence. l.14592 \code {"\#"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14594 \item[\code{flag}] for \code{formatC}, a character string giving a ! Undefined control sequence. l.14594 \item[\code{flag}] for \code {formatC}, a character string giving a ! Undefined control sequence. l.14597 \code {"0"} pads leading zeros; \code{"-"} does left adjustment, ! Undefined control sequence. l.14597 \code{"0"} pads leading zeros; \code {"-"} does left adjustment, ! Undefined control sequence. l.14598 others are \code {"+"}, \code{" "}, and \code{"\#"}; on some ! Undefined control sequence. l.14598 others are \code{"+"}, \code {" "}, and \code{"\#"}; on some ! Undefined control sequence. l.14598 ...s are \code{"+"}, \code{" "}, and \code {"\#"}; on some ! Undefined control sequence. l.14599 platform--locale combination, \code {"'"} activates ! Undefined control sequence. l.14601 \file {glibc} allow \code{"I"} for integer conversion to use the loca... ! Undefined control sequence. l.14601 \file{glibc} allow \code {"I"} for integer conversion to use the loca... ! Undefined control sequence. l.14605 used to have no effect for \code {character} formatting, but signal ! Undefined control sequence. l.14606 an error since \R {} 3.4.0. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14609 \item[\code{mode}] \code{"double"} (or \code{"real"}), \code{"intege... ! Undefined control sequence. l.14609 \item[\code{mode}] \code {"double"} (or \code{"real"}), \code{"intege... ! Undefined control sequence. l.14609 ...[\code{mode}] \code{"double"} (or \code {"real"}), \code{"integer"... ! Undefined control sequence. l.14609 ...ode{"double"} (or \code{"real"}), \code {"integer"} or ! Undefined control sequence. l.14610 \code {"character"}. ! Undefined control sequence. l.14611] ...termined from the storage mode of \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14613 \item[\code{big.mark}] character; if not empty used as mark between ... ! Undefined control sequence. l.14614 \code {big.interval} decimals \emph{before} (hence \code{big}) the ! Undefined control sequence. l.14614 ...al} decimals \emph{before} (hence \code {big}) the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14616 \item[\code{big.interval}] see \code{big.mark} above; defaults to 3. ! Undefined control sequence. l.14616 \item[\code{big.interval}] see \code {big.mark} above; defaults to 3. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14617 \item[\code{small.mark}] character; if not empty used as mark betwee... ! Undefined control sequence. l.14618 \code {small.interval} decimals \emph{after} (hence \code{small}) the ! Undefined control sequence. l.14618 ...val} decimals \emph{after} (hence \code {small}) the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14620 \item[\code{small.interval}] see \code{small.mark} above; defaults t... ! Undefined control sequence. l.14620 \item[\code{small.interval}] see \code {small.mark} above; defaults t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14621 \item[\code{decimal.mark}] the character to be used to indicate the ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14623 \item[\code{input.d.mark}] if \code{x} is \code{\LinkA{character}{ch... ! Undefined control sequence. l.14623 \item[\code{input.d.mark}] if \code {x} is \code{\LinkA{character}{ch... ! Undefined control sequence. l.14623 ...ode{input.d.mark}] if \code{x} is \code {\LinkA{character}{charact... ! Undefined control sequence. l.14623 ...ut.d.mark}] if \code{x} is \code{\LinkA {character}{character}}, the ! Undefined control sequence. l.14625 \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14626 \item[\code{preserve.width}] string specif]ying if the string widths ... ! Undefined control sequence. l.14628 (\code {big.mark} or \code{small.mark}) are added. \code{"common"}, ! Undefined control sequence. l.14628 (\code{big.mark} or \code {small.mark}) are added. \code{"common"}, ! Undefined control sequence. l.14628 ...or \code{small.mark}) are added. \code {"common"}, ! Undefined control sequence. l.14629 the default, corresponds to \code {\LinkA{format}{format}}-like behavior ! Undefined control sequence. l.14629 the default, corresponds to \code{\LinkA {format}{format}}-like behavior ! Undefined control sequence. l.14630 whereas \code {"individual"} is the default in ! Undefined control sequence. l.14631 \code {formatC()}. Value can be abbreviated. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14632 \item[\code{zero.print}] logical, character string or \code{NULL} sp... ! Undefined control sequence. l.14632 ...nt}] logical, character string or \code {NULL} specifying ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14635 \item[\code{drop0trailing}] logical, indicating if trailing zeros, ! Undefined control sequence. l.14636 i.e., \code {"0"} \emph{after} the decimal mark, should be removed; ! Undefined control sequence. l.14637 also drops \code {"e+00"} in exponential formats. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14638 \item[\code{is.cmplx}] optional logical, to be used when \code{x} is ! Undefined control sequence. l.14638 ...optional logical, to be used when \code {x} is ! Undefined control sequence. l.14639 \code {"\LinkA{character}{character}"} to indicate if it stems from ! Undefined control sequence. l.14639 \code{"\LinkA {character}{character}"} to indicate if it stems from ! Undefined control sequence. l.14640 \code {\LinkA{complex}{complex}} vector or not. By default (\code{NA}), ! Undefined control sequence. l.14640 \code{\LinkA {complex}{complex}} vector or not. By default (\code{NA}), ! Undefined control sequence. l.14640 ...lex}} vector or not. By default (\code {NA}), ! Undefined control sequence. l.14641 \code {x} is checked to `look like' complex. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14642 \item[\code{...}] arguments passed to \code{format}. ! Undefined control sequence. l.14642 ...m[\code{...}] arguments passed to \code {format}. [146 Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 []@textrm There is some con-fu-sion be-tween @texttt xz[] @textrm and @texttt l zma[] @textrm com-pres-sion (see Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 [][]@texttt https://en.wikipedia.org/wiki/Xz[][][] @textrm and [][]@texttt http s://en.wikipedia.org/wiki/LZMA[][][]@textrm ): Appendix A [81] [118] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14644 \item[\code{nx}] numeric vector of the same length as \code{x}, typi... ! Undefined control sequence. l.14644 ...eric vector of the same length as \code {x}, typically the ! Undefined control sequence. l.14645 ...ers of which the character vector \code {x} is the pre-format. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14646 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14647 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14649 \begin{Details} \relax ! Undefined control sequence. l.14650 If you set \code {format} it overrides the setting of \code{mode}, so ! Undefined control sequence. l.14650 ...rmat} it overrides the setting of \code {mode}, so ! Undefined control sequence. l.14651 \code {formatC(123.45, mode = "double", format = "d")} gives \code{123}. ! Undefined control sequence. l.14651 ... = "double", format = "d")} gives \code {123}. ! Undefined control sequence. l.14654 use \code {n.ddde+nnn} or \code{n.dddenn} rather than \code{n.ddde+nn}. ! Undefined control sequence. l.14654 use \code{n.ddde+nnn} or \code {n.dddenn} rather than \code{n.ddde+nn}. ! Undefined control sequence. l.14654 ...n} or \code{n.dddenn} rather than \code {n.ddde+nn}. ! Undefined control sequence. l.14656 \code {formatC} does not necessarily align the numbers on the decimal ! Undefined control sequence. l.14657 point, so \code {formatC(c(6.11, 13.1), digits = 2, format = "fg")} g... ! Undefined control sequence. l.14658 \code {c("6.1", " 13")}. If you want common formatting for several ! Undefined control sequence. l.14659 numbers, use \code {\LinkA{format}{format}}. ! Undefined control sequence. l.14659 numbers, use \code{\LinkA {format}{format}}. ! Undefined control sequence. l.14661 \code {prettyNum} is the utility function for prettifying \code{x}. ! Undefined control sequence. l.14661 ... utility function for prettifying \code {x}. ! Undefined control sequence. l.14662 \code {x} can be complex (or \code{\LinkA{format}{format}()}... ! Undefined control sequence. l.14662 \code{x} can be complex (or \code {\LinkA{format}{format}()}... ! Undefined control sequence. l.14662 \code{x} can be complex (or \code{\LinkA {format}{format}()}... ! Undefined control sequence. l.14663 \code {x} is not a character, \code{format(x[i], ...)} is applied to ! Undefined control sequence. l.14663 \code{x} is not a character, \code {format(x[i], ...)}] is applied to ! Undefined control sequence. l.14665 are at their defaults. Use the \code {input.d.mark} argument for ! Undefined control sequence. l.14666 \code {prettyNum(x)} when \code{x} is a \code{character} vector not ! Undefined control sequence. l.14666 \code{prettyNum(x)} when \code {x} is a \code{character} vector not ! Undefined control sequence. l.14666 ...{prettyNum(x)} when \code{x} is a \code {character} vector not ! Undefined control sequence. l.14667 resulting from something like \code {format()} with a period as ! Undefined control sequence. l.14670 Because \code {\LinkA{gsub}{gsub}} is used to insert the \code{big.mark} ! Undefined control sequence. l.14670 Because \code{\LinkA {gsub}{gsub}} is used to insert the \code{big.mark} ! Undefined control sequence. l.14670 ...sub}{gsub}} is used to insert the \code {big.mark} ! Undefined control sequence. l.14671 and \code {small.mark}, special characters need escaping. In particu... ! Undefined control sequence. l.14672 to insert a single backslash, use \code {"\bsl{}\bsl{}\bsl{}\bsl{}"}. ! Undefined control sequence. l.14672 ...ert a single backslash, use \code{"\bsl {}\bsl{}\bsl{}\bsl{}"}. ! Undefined control sequence. l.14672 ...single backslash, use \code{"\bsl{}\bsl {}\bsl{}\bsl{}"}. ! Undefined control sequence. l.14672 ... backslash, use \code{"\bsl{}\bsl{}\bsl {}\bsl{}"}. ! Undefined control sequence. l.14672 ...lash, use \code{"\bsl{}\bsl{}\bsl{}\bsl {}"}. ! Undefined control sequence. l.14674 The C doubles used for \R {} numerical vectors have signed zeros, which ! Undefined control sequence. l.14675 \code {formatC} may output as \code{-0}, \code{-0.000} \dots. ! Undefined control sequence. l.14675 \code{formatC} may output as \code {-0}, \code{-0.000} \dots. ! Undefined control sequence. l.14675 ...formatC} may output as \code{-0}, \code {-0.000} \dots. ! Undefined control sequence. l.14677 There is a warning if \code {big.mark} and \code{decimal.mark} are the ! Undefined control sequence. l.14677 ... a warning if \code{big.mark} and \code {decimal.mark} are the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14679 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14681 \begin{Value} ! Undefined control sequence. l.14682 ...ct of same size and attributes as \code {x} (after ! Undefined control sequence. l.14685 Unlike \code {\LinkA{format}{format}}, each number is formatted indiv... ! Undefined control sequence. l.14685 Unlike \code{\LinkA {format}{format}}, each number is formatted indiv... ! Undefined control sequence. l.14686 Looping over each element of \code {x}, the C function ! Undefined control sequence. l.14687 \code {sprintf(...)} is called for numeric inputs ( [82inside the C ! Undefined control sequence. l.14688 function \code {str\_signif}). ! Undefined control sequence. l.14690 \code {formatC}: for character \code{x}, do simple (left or right) ! Undefined control sequence. l.14690 \code{formatC}: for character \code {x}, do simple (left or right) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14692 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14694 \begin{Note} \relax ! Undefined control sequence. l.14695 The default for \code {decimal.mark} in \code{formatC()} was changed in ! Undefined control sequence. l.14695 ...efault for \code{decimal.mark} in \code {formatC()} was changed in ! Undefined control sequence. l.14696 \R {} 3.2.0: for use within \code{\LinkA{print}{print}} methods in pa... ! Undefined control sequence. l.14696 \R{} 3.2.0: for use within \code {\LinkA{print}{print}} methods in pa... ! Undefined control sequence. l.14696 \R{} 3.2.0: for use within \code{\LinkA {print}{print}} methods in pa... ! Undefined control sequence. l.14697 be used with earlier versions: use \code {decimal.mark = getOption("O... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14699 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14701 \begin{Author} \relax ! Undefined control sequence. l.14702 \code {formatC} was originally written by Bill Dunlap for S-PLUS, later ! Undefined control sequence. l.14705 It was first adapted for \R {} by Friedrich Leisch and since much ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14710 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14712 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14715 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14717 \begin{SeeAlso} \relax ! Undefined control sequence. l.14718 \code {\LinkA{format}{format}}. ! Undefined control sequence. l.14718 \code{\LinkA {format}{format}}. ! Undefined control s]equence. l.14720 \code {\LinkA{sprintf}{sprintf}} for more general C-like formatting. ! Undefined control sequence. l.14720 \code{\LinkA {sprintf}{sprintf}} for more general C-like formatting. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14721 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14723 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14724 \begin{ExampleCode} ! Missing $ inserted. $ l.14725 xx <- pi * 10^ (-5:4) ! Missing $ inserted. $ l.14730 Underfull \hbox (badness 2302) in paragraph at lines 14720--14730 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 f\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; flag \OT 1/cmr/m/n/10 = "0"))\OML/cmm/m/it/10 cbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 for mat\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 xx; digits \OT1/cmr/m/n/10 = 4)\OML/cmm/m/ it/10 ; formatC\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 xx; digits \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in horizontal mode. l.14731 ...c("a", "Abc", "no way"), width = -7) # <=> flag = "-" ! You can't use `macro parameter character #' in vertical mode. l.14734 # # note that some of the results here depend on the implementation ! You can't use `macro parameter character #' in vertical mode. l.14734 ## note that some of the results here depend on the implementation ! You can't use `macro parameter character #' in horizontal mode. l.14735 # # of long-double arithmetic, which is platform-specific. ! You can't use `macro parameter character #' in horizontal mode. l.14735 ## of long-double arithmetic, which is platform-specific. ! You can't use `macro parameter character #' in horizontal mode. l.14737 # # 1 2 3 4 5 6 ! You can't use `macro parameter character #' in horizontal mode. l.14737 ## 1 2 3 4 5 6 ! You can't use `macro parameter character #' in horizontal mode. l.14739 formatC(xx, format = "fg") # special "fixed" format. ! You can't use `macro parameter character #' in horizontal mode. l.14740 ...C(xx[1:4], format = "f", digits = 75) # >> even longer strings ! You can't use `macro parameter character #' in horizontal mode. l.14745 # # American: ! You can't use `macro parameter character #' in horizontal mode. l.14745 ## American: ! You can't use `macro parameter character #' in horizontal mode. l.14747 # # Some Europeans: ! You can't use `macro parameter character #' in horizontal mode. l.14747 ## Some Europeans: [147] [83 Underfull \hbox (badness 1215) in paragraph at lines 14750--14752 []\OT1/cmr/m/n/10 (dd <- sap-ply(1:10, func-tion(i) paste((9:0)[1:i], col-lapse = ""))) pret- ! You can't use `macro parameter character #' in vertical mode. l.14753 # # examples of 'small.mark' ! You can't use `macro parameter character #' in vertical mode. l.14753 ## examples of 'small.mark' Underfull \hbox (badness 1292) in paragraph at lines 14753--14757 \OT1/cmr/m/n/10 cbind(format (pN, small.mark = " ", dig-its = 15)) cbind(format C(pN, ! Missing $ inserted. $ l.14758 cbind(ff <- format(1.2345 + 10^ (0:5), width = 11, big.mark = "'")) ! You can't use `macro parameter character #' in math mode. l.14759 # # all with same width (one more than the specified minimum) ! You can't use `macro parameter character #' in math mode. l.14759 ## all with same width (one more than the specified minimum) ! Missing $ inserted. $ l.14760 Underfull \hbox (badness 3039) in paragraph at lines 14758--14760 []\OT1/cmr/m/n/10 cbind(ff <- for-mat(1.2345 + 10$[]0 : 5)\OML/cmm/m/it/10 ; wi dth \OT1/cmr/m/n/10 = 11\OML/cmm/m/it/10 ; big:mark \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.14761 # # individual formatting to common width: ! You can't use `macro parameter character #' in vertical mode. l.14761 ## individual formatting to common width: ! Missing $ inserted. $ l.14762 fc <- formatC(1.234 + 10^ (0:8), format = "fg", width = 11, big.mark ... ! You can't use `macro parameter character #' in math mode. l.14764 # # Powers of two, stored exactly, formatted individually: ! You can't use `macro parameter character #' in math mode. l.14764 ## Powers of two, stored exactly, formatted individually: ! You can't use `macro parameter character #' in math mode. l.14766 # # nicely printed (the last line showing 5^32 exactly): ! You can't use `macro parameter character #' in math mode. l.14766 ## nicely printed (the last line showing 5^32 exactly): ! Missing $ inserted. $ l.14768 Underfull \hbox (badness 10000) in paragraph at lines 14761--14768 []\OT1/cmr/m/n/10 individual for-mat-ting to com-mon width: fc <- for-matC(1.23 4 Underfull \hbox (badness 10000) in paragraph at lines 14761--14768 \OT1/cmr/m/n/10 + 10$[]0 : 8)\OML/cmm/m/it/10 ; format \OT1/cmr/m/n/10 = "\OML/ cmm/m/it/10 fg\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; width \OT1/cmr/m/n/10 = 11\OM L/cmm/m/it/10 ; big:mark \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 14761--14768 \OT1/cmr/m/n/10 "[]")\OML/cmm/m/it/10 cbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 fc \OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Powersoftwo; storedexactly; formattedindividu ally \OT1/cmr/m/n/10 : Underfull \hbox (badness 1454) in paragraph at lines 14761--14768 \OML/cmm/m/it/10 pow:\OT1/cmr/m/n/10 2 \OML/cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\ OML/cmm/m/it/10 formatC\OT1/cmr/m/n/10 (2[](1 : 32)\OML/cmm/m/it/10 ; digits \O T1/cmr/m/n/10 = 24\OML/cmm/m/it/10 ; width \OT1/cmr/m/n/10 = 1\OML/cmm/m/it/10 ; format \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.14769 # # complex numbers: ! You can't use `macro parameter character #' in vertical mode. l.14769 ## complex numbers: ! Missing $ inserted. $ l.14770 r <- 10.0000001; rv <- (r/10)^ (1:10) ! You can't use `macro parameter character #' in math mode. l.14772 op <- options(digits = 7) # # (system default) ! You can't use `macro parameter character #' in math mode. l.14772 op <- options(digits = 7) ## (system default) ! You can't use `macro parameter character #' in math mode. l.14776 # # more digits change the picture: ! You can't use `macro parameter character #' in math mode. l.14776 ## more digits change the picture: ! You can't use `macro parameter character #' in math mode. l.14780 prettyNum(fv, drop0trailing = TRUE) # a bit nicer ! Missing $ inserted. $ l.14782 Underfull \hbox (badness 10000) in paragraph at lines 14769--14782 []\OT1/cmr/m/n/10 complex num-bers: r <- 10.0000001; rv <- (r/10)$[]1 : Underfull \hbox (badness 10000) in paragraph at lines 14769--14782 \OT1/cmr/m/n/10 10)(\OML/cmm/m/it/10 zv < \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 rv \OT1/cmr/m/n/10 + 1\OML/cmm/m/it/10 i \OMS/cmsy/m/n/10 ^^C \OML/cmm/m/it/10 rv\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 op < \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 options\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 digits \OT1/cmr/m/n/1 0 = Underfull \hbox (badness 5302) in paragraph at lines 14769--14782 \OT1/cmr/m/n/10 7)(\OML/cmm/m/it/10 systemdefault\OT1/cmr/m/n/10 )(\OML/cmm/m/i t/10 pnv < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 prettyNum\OT1/cmr/m/n/10 (\OML/ cmm/m/it/10 zv\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 stopifnot\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 pnv \OT1/cmr/m/n/10 == "1 + Underfull \hbox (badness 6927) in paragraph at lines 14769--14782 \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 i\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; pnv \OT1 /cmr/m/n/10 == \OML/cmm/m/it/10 format\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 zv\OT1/ cmr/m/n/10 )\OML/cmm/m/it/10 ; pnv \OT1/cmr/m/n/10 == \OML/cmm/m/it/10 prettyNu m\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 zv; drop\OT1/cmr/m/n/10 0\OML/cmm/m/it/10 tr ailing \OT1/cmr/m/n/10 = Underfull \hbox (badness 2781) in paragraph at lines 14769--14782 \OML/cmm/m/it/10 TRUE\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 moredigitschangethepict ure \OT1/cmr/m/n/10 : \OML/cmm/m/it/10 options\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 digits \OT1/cmr/m/n/10 = 8)\OML/cmm/m/it/10 head\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 fv < Underfull \hbox (badness 10000) in paragraph at lines 14769--14782 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 format\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 zv \OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3)\OML/cmm/m/it/10 prettyNu m\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 fv\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 prettyNu m\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 fv; drop\OT1/cmr/m/n/10 0\OML/cmm/m/it/10 tr ailing \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.14783 # # The ' flag : ! You can't use `macro parameter character #' in vertical mode. l.14783 ## The ' flag : ! You can't use `macro parameter character #' in horizontal mode. l.14784 doLC <- FALSE # R warns, so change to TRUE manually if you want see ... ! Missing $ inserted. $ l.14786 oldLC <- Sys.setlocale("LC_ NUMERIC", "de_CH.UTF-8") ! You can't use `macro parameter character #' in math mode. l.14788 # # --> ..... " 1'001" " 10'001" on supported platforms ! You can't use `macro parameter character #' in math mode. l.14788 ## --> ..... " 1'001" " 10'001" on supported platforms ! You can't use `macro parameter character #' in math mode. l.14789 if(doLC) # # revert, typically to "C" : ! You can't use `macro parameter character #' in math mode. l.14789 if(doLC) ## revert, typically to "C" : ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14791 \end{ExampleCode} ! Missing $ inserted. $ l.14791 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.14792 \end{Examples} ! Undefined control sequence. l.14793 \HeaderA {formatDL}{Format Description Lists}{formatDL} ! Undefined control sequence. l.14794 \keyword {print}{formatDL} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14796 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14799 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14801 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 14783--14802 []\OT1/cmr/m/n/10 The ' flag : doLC <- FALSE R warns, so change to Underfull \hbox (badness 10000) in paragraph at lines 14783--14802 \OT1/cmr/m/n/10 TRUE man-u-ally if you want see the ef-fect if(doLC) oldLC <- Underfull \hbox (badness 10000) in paragraph at lines 14783--14802 \OT1/cmr/m/n/10 Sys.setlocale("LC$[]\OML/cmm/m/it/10 UMERIC\OT1/cmr/m/n/10 "\OM L/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 de[]H:UTF \OMS/cmsy/m/n/10 ^^ @ \OT1/cmr/m/n/10 8")\OML/cmm/m/it/10 formatC\OT1/cmr/m/n/10 (1\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 234 + Underfull \hbox (badness 4819) in paragraph at lines 14783--14802 \OT1/cmr/m/n/10 10[]0 : 4)\OML/cmm/m/it/10 ; format \OT1/cmr/m/n/10 = "\OML/cmm /m/it/10 fg\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; width \OT1/cmr/m/n/10 = 11\OML/c mm/m/it/10 ; flag \OT1/cmr/m/n/10 = "[]") \OMS/cmsy/m/n/10 ^^@ ^^@ \OML/cmm/m/i t/10 > Underfull \hbox (badness 10000) in paragraph at lines 14783--14802 \OML/cmm/m/it/10 :::::\OT1/cmr/m/n/10 "1[]001""10[]001"\OML/cmm/m/it/10 onsuppo rtedplatformsif\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 doLC\OT1/cmr/m/n/10 )\OML/cmm/ m/it/10 revert; typicallyto\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 C\OT1/cmr/m/n/10 " : ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14806 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14808 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14809 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14810 \item[\code{x}] a vector giving the items to be described, or a list of ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14813 \item[\code{y}] a vector of the same length as \code{x} with the ! Undefined control sequence. l.14813 ...}] a vector of the s Overfull \hbox (61.1125pt too wide) in paragraph at lines 10210--10212 [][][]@smallrm For ex-am-ple, `@smalltt _GLIBCXX_USE_CXX11_ABI[]@smallrm '[] in @smalltt g++[] @smallrm 5.1 and later: [][]@smalltt https://gcc.gnu.org/online docs/libstdc++/manual/using_ [119 Appendix B [84ame length as \code {x} with the ! Undefined control sequence. l.14814 ...nding descriptions. Only used if \code {x} does not already ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14816 \item[\code{style}] a character string specifying the rendering styl... ! Undefined control sequence. l.14818 If \code {"table"}, a two-column table with ! Undefined control sequence. l.14820 \AsIs {@table} environment). If \code{"list"}, a LaTeX-style tagged ! Undefined control sequence. l.14820 \AsIs{@table} environment). If \code {"list"}, a LaTeX-style tagged ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14822 \item[\code{width}] a positive integer giving the target column for ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14824 \item[\code{indent}] a positive integer specifying the indentation o... ! Undefined control sequence. l.14826 ... style. Must not be greater than \code {width/2}, and ! Undefined control sequence. l.14827 defaults to \code {width/3} for table style and \code{width/9} for ! Undefined control sequence. l.14827 ...code{width/3} for table style and \code {width/9} for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14829 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14830 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14832 \begin{Details} \relax ! Undefined control sequence. l.14836 In table style, items with more than \code {indent - 3} characters are ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14838 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14840 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14842 \end{Value} ] ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14844 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14845 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.14846 # # Provide a nice summary of the numerical characteristics of the ! You can't use `macro parameter character #' in horizontal mode. l.14846 ## Provide a nice summary of the numerical characteristics of the ! You can't use `macro parameter character #' in horizontal mode. l.14847 # # machine R is running on: ! You can't use `macro parameter character #' in horizontal mode. l.14847 ## machine R is running on: ! You can't use `macro parameter character #' in horizontal mode. l.14849 # # Inspect Sys.getenv() results in "list" style (by default, these are ! You can't use `macro parameter character #' in horizontal mode. l.14849 ## Inspect Sys.getenv() results in "list" style (by default, these are ! You can't use `macro parameter character #' in horizontal mode. l.14850 # # printed in "table" style): ! You can't use `macro parameter character #' in horizontal mode. l.14850 ## printed in "table" style): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14852 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14853 \end{Examples} ! Undefined control sequence. l.14854 \HeaderA {function}{Function Definition}{function} ! Undefined control sequence. l.14855 \aliasA {closure}{function}{closure} ! Undefined control sequence. l.14856 \aliasA {return}{function}{return} ! Undefined control sequence. l.14857 \keyword {programming}{function} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14859 \begin{Description} \relax ! Undefined control sequence. l.14861 new functions in the \R {} language. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14862 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14864 \begin{Usage} [148]] Underfull \hbox (badness 2635) in paragraph at lines 7023--7029 @textrm `@texttt --no-site-file[]@textrm '[] was given. The name of this file is taken from the value Underfull \hbox (badness 2158) in paragraph at lines 7023--7029 @textrm of the @texttt R_PROFILE[] @textrm en-vi-ron-ment vari-able. If that v ari-able is un-set, the de-fault [85 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14869 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14871 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14872 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14873 \item[\code{arglist}] Empty or one or more name or name=expression t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14874 \item[\code{expr}] An expression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14875 \item[\code{value}] An expression. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14876 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14877 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14879 \begin{Details} \relax ! Undefined control sequence. l.14881 (see `\LinkA {backquote}{backquote}'). ! Undefined control sequence. l.14883 If \code {value} is missing, \code{NULL} is returned. If it is a ! Undefined control sequence. l.14883 If \code{value} is missing, \code {NULL} is returned. If it is a ! Undefined control sequence. l.14885 ...xpression is evaluated as soon as \code {return} is called, in ! Undefined control sequence. l.14887 \code {\LinkA{on.exit}{on.exit}} expression is evaluated.) ! Undefined control sequence. l.14887 \code{\LinkA {on.exit}{on.exit}} expression is evaluated.) ! Undefined control sequence. l.14889 ...nction is reached without calling \code {return}, the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14891 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14893 \begin{Section} {Technical details} ! Undefined control sequence. l.14894 ... of function is not the only type in \R {}: they are called ! Undefined control sequence. l.14896 \LinkA {primitive}{primitive} functions. ! Undefined control sequence. l.14898 A closure has three components, its \code {\LinkA{formals}{formals}} ... ! Undefined control sequence. l.14898 ... has three components, its \code{\LinkA {formals}{formals}} (its a... ! Undefined control sequence. l.14899 list), its \code {\LinkA{body}{body}} (\code{expr} in the `Usage' ! Undefined control sequence. l.14899 list), its \code{\LinkA {body}{body}} (\code{expr} in the `Usage' ! Undefined control sequence. l.14899 ...), its \code{\LinkA{body}{body}} (\code {expr} in the `Usage' ! Undefined control sequence. l.14900 section) and its \code {\LinkA{environment}{environment}} which provi... ! Undefined control sequence. l.14900 section) and its \code{\LinkA {environment}{environment}} which provi... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14906 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14908 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14912 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14914 \begin{SeeAlso} \relax ! Undefined control sequence. l.14915 \code {\LinkA{args}{args}}. ! Undefined control sequence. l.14915 \code{\LinkA {args}{args}}. ! Undefined control sequence. l.14917 \code {\LinkA{formals}{formals}}, \code{\LinkA{body}{body}} and ! Undefined control sequence. l.14917 \code{\LinkA {formals}{formals}}, \code{\LinkA{body}{body}} and ! Undefined control sequence. l.14917 \code{\LinkA{formals}{formals}}, \code {\LinkA{body}{body}} and ! Undefined control sequence. l.14917 ...\LinkA{formals}{formals}}, \code{\LinkA {body}{body}} and ! Undefined control sequence. l.14918 \code {\LinkA{environment}{environment}} for accessing the component ... ! Undefined control sequence. l.14918 \code{\LinkA {environment}{environment}} for accessing the component ... ! Undefined control sequence. l.14921 \code {\LinkA{debug}{debug}} for debugging; using \code{\LinkA{invisi... ! Undefined control sequence. l.14921 \code{\LinkA {debug}{debug}} for debugging; using \code{\LinkA{invisi... ! Undefined control sequence. l.14921 ...bug}{debug}} for debugging; using \code ] {\LinkA{invisible}{invisib... ! Undefined control sequence. l.14921 ...bug}} for debugging; using \code{\LinkA {invisible}{invisible}} in... ! Undefined control sequence. l.14922 \code {return(.)} for returning \emph{invisibly}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14923 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14925 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14926 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.14930 # # An anonymous function: ! You can't use `macro parameter character #' in vertical mode. l.14930 ## An anonymous function: ! Missing $ inserted. $ l.14931 (function(x, y){ z <- x^ 2 + y^2; x+y+z })(0:7, 1) ! Extra }, or forgotten $. l.14931 (function(x, y){ z <- x^2 + y^2; x+y+z } )(0:7, 1) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14932 \end{ExampleCode} ! Missing $ inserted. $ l.14932 \end{ExampleCode} ! Missing } inserted. } l.14932 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14933 \end{Examples} ! Undefined control sequence. l.14934 \HeaderA {funprog}{Common Higher-Order Functions in Functional Progra... ! Undefined control sequence. l.14935 \aliasA {Filter}{funprog}{Filter} ! Undefined control sequence. l.14936 \aliasA {Find}{funprog}{Find} ! Undefined control sequence. l.14937 \aliasA {Map}{funprog}{Map} ! Undefined control sequence. l.14938 \aliasA {Negate}{funprog}{Negate} ! Undefined control sequence. l.14939 \aliasA {Position}{funprog}{Position} ! Undefined control sequence. l.14940 \aliasA {Reduce}{funprog}{Reduce} ! Undefined control sequence. l.14941 \keyword {programming}{funprog} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14943 \begin{Description} \relax ! Undefined control sequence. l.14944 \code {Reduce} uses a binary function to successively combine the ! Undefined control sequence. l.14946 \code {Filter} extracts the elements of a vector for which a predicate ! Undefined control sequence. l.14947 (logical) function gives true. \code {Find} and \code{Position} give ! Undefined control sequence. l.14947 ...tion gives true. \code{Find} and \code {Positi Overfull \hbox (16.31242pt too wide) in paragraph at lines 10329--10329 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [120on} give ! Undefined control sequence. l.14949 respectively. \code {Map} applies a function to the corresponding ! Undefined control sequence. l.14950 elements of given vectors. \code {Negate} creates the negation of a ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14952 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14954 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14963 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14965 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14966 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14967 \item[\code{f}] a function of the appropriate arity (binary for ! Undefined control sequence. l.14968 \code {Reduce}, unary for \code{Filter}, \code{Find} and ! Undefined control sequence. l.14968 \code{Reduce}, unary for \code {Filter}, \code{Find} and ! Undefined control sequence. l.14968 ...Reduce}, unary for \code{Filter}, \code {Find} and ! Undefined control sequence. l.14969 \code {Position}, \eqn{k}{}-ary for \code{Map} if this is called with ! Undefined control sequence. l.14969 \code{Position}, \eqn {k}{}-ary for \code{Map} if this is called with ! Undefined control sequence. l.14969 \code{Position}, \eqn{k}{}-ary for \code {Map} if this is called with ! Undefined control sequence. l.14970 \eqn {k}{} arguments). An arbitrary predicate function for ! Undefined control sequence. l.14971 \code {Negate}. [149 [86]]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14972 \item[\code{x}] a vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14973 \item[\code{init}] an \R{} object of the same kind as the elements of ! Undefined control sequence. l.14973 \item[\code{init}] an \R {} object of the same kind as the elements of ! Undefined control sequence. l.14974 \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14975 \item[\code{right}] a logical indicating whether to proceed from lef... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14977 \item[\code{accumulate}] a logical indicating whether the successive... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14980 \item[\code{nomatch}] the value to be returned in the case when ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14982 \item[\code{...}] vectors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14983 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14984 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14986 \begin{Details} \relax ! Undefined control sequence. l.14987 If \code {init} is given, \code{Reduce} logically adds it to the start ! Undefined control sequence. l.14987 If \code{init} is given, \code {Reduce} logically adds it to the start ! Undefined control sequence. l.14988 ...ding left to right) or the end of \code {x}, respectively. ! Undefined control sequence. l.14989 If this possibly augmented vector \eqn {v}{} has \eqn{n > 1}{} elements, ! Undefined control sequence. l.14989 ...bly augmented vector \eqn{v}{} has \eqn {n > 1}{} elements, ! Undefined control sequence. l.14990 \code {Reduce} successively applies \eqn{f}{} to the elements of \eqn... ! Undefined control sequence. l.14990 \code{Reduce} successively applies \eqn {f}{} to the elements of \eqn... ! Undefined control sequence. l.14990 ...plies \eqn{f}{} to the elements of \eqn {v}{} ! Undefined control sequence. l.14992 reduce computes \eqn {l_1 = f(v_1, v_2)}{}, \eqn{l_2 = f(l_1, v_3)}{}... ! Missing $ inserted. $ l.14992 reduce computes \eqn{l_ 1 = f(v_1, v_2)}{}, \eqn{l_2 = f(l_1, v_3)}{}... ! Extra }, or forgotten $. l.14992 reduce computes \eqn{l_1 = f(v_1, v_2)} {}, \eqn{l_2 = f(l_1, v_3)}{}... ! Undefined control sequence. l.14992 ...omputes \eqn{l_1 = f(v_1, v_2)}{}, \eqn {l_2 = f(l_1, v_3)}{}, etc., ! Undefined control sequence. l.14993 and returns \eqn {l_{n-1} = f(l_{n-2}, v_n)}{}, and a right reduce does ! Undefined control sequence. l.14994 \eqn {r_{n-1} = f(v_{n-1}, v_n)}{}, \eqn{r_{n-2} = f(v_{n-2}, r_{n-1}... ! Undefined control sequence. l.14994 \eqn{r_{n-1} = f(v_{n-1}, v_n)}{}, \eqn {r_{n-2} = f(v_{n-2}, r_{n-1}... ! Undefined control sequence. l.14995 and returns \eqn {r_1 = f(v_1, r_2)}{}. (E.g., if \eqn{v}{} is the ! Undefined control sequence. l.14995 ...n{r_1 = f(v_1, r_2)}{}. (E.g., if \eqn {v}{} is the ! Undefined control sequence. l.14996 sequence (2, 3, 4) and \eqn {f}{} is division, left and right reduce ... ! Undefined control sequence. l.14997 \eqn {(2 / 3) / 4 = 1/6}{} and \eqn{2 / (3 / 4) = 8/3}{}, respectively.) ! Undefined control sequence. l.14997 \eqn{(2 / 3) / 4 = 1/6}{} and \eqn {2 / (3 / 4) = 8/3}{}, respectively.) ! Undefined control sequence. l.14998 If \eqn {v}{} has only a single element, this is returned; if there are ! Undefined control sequence. l.14999 no elements, \code {NULL} is returned. Thus, it is ensured that ! Undefined control sequence. l.15000 \code {f} is always called with 2 arguments. ! Missing $ inserted. $ l.15001 Overfull \hbox (1430.39703pt too wide) in paragraph at lines 14982--15001 \OML/cmm/m/it/10 f\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 v[]; v[]\OT1/cmr/m/n/10 )[] \OML/cmm/m/it/10 ; [][]; etc:; andreturns[][]; andarightreducedoes[][]; [][]and returns[][]:\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 E:g:; ifv[]isthesequence\OT1/cmr/ m/n/10 (2\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 4)\OML/cmm/m/it/10 andf[]isdivision; leftandrightreducegive[][]and[][]; respec tively:\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Ifv[]hasonlyasingleelement; thisisretu rned\OT1/cmr/m/n/10 ; \OML/cmm/m/it/10 iftherearenoelements; []isreturned:Thus; itisensuredthatfisalwayscalledwith\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 arguments: $ ! Undefined control sequence. l.15005 \code {Reduce} is patterned after Common Lisp's \code{reduce}. A ! Undefined control sequence. l.15005 ... is patterned after Common Lisp's \code {reduce}. A ! Undefined control sequence. l.15010 \code {Filter} applies the unary predicate function \code{f} to each ! Undefined control sequence. l.15010 ...lies the unary predicate function \code {f} to each ! Undefined control sequence. l.15011 element of \code {x}, coercing to logical if necessary, and returns the ! Undefined control sequence. l.15012 subset of \code {x} for which this gives true. Note that possible ! Undefined control sequence. l.15013 \code {NA} values are currently always taken as false; control [87over ! Undefined control sequence. l.15014 \code {NA} handling may be added in the future. \code{Filter} ! Undefined control sequence. l.15014 ...ling may be added in the future. \code {Filter} ! Undefined control sequence. l.15015 corresponds to \code {filter} in Haskell or \code{remove-if-not} in ! Undefined control sequence. l.15015 ...ds to \code{filter} in Haskell or \code {remove-if-not} in ! Undefined control sequence. l.15018 \code {Find} and \code{Position} are patterned after Common Lisp's ! Undefined control sequence. l.15018 \code{Find} and \code {Position} are patterned after Common Lisp's ! Undefined control sequence. l.15019 \code {find-if} and \code{position-if}, respectively. If there is an ! Undefined control sequence. l.15019 \code{find-if} and \code {position-if}, respectively. If there is an ! Undefined control sequence. l.15022 \code {right} is false (default) or true, respectively. If there is no ! Undefined control sequence. l.15023 such element, the value specified by \code {nomatch} is returned. The ! Undefined control sequence. l.15026 \code {Map} is a simple wrapper to \code{\LinkA{mapply}{mapply}} whic... ! Undefined control sequence. l.15026 \code{Map} is a simple wrapper to \code {\LinkA{mapply}{mapply}} whic... ! Undefined control sequence. l.15026 ...ap} is a simple wrapper to \code{\LinkA {mapply}{mapply}} which do... ! Undefined control sequence. l.15027 ... result, similar to Common Lisp's \code {mapcar} ! Undefined control sequence. l.15031 \code {Negate} corresponds to Common Lisp's \code{complement}. Given a ! Undefined control sequence. l.15031 ...ate} corresponds to Common Lisp's \code {complement}. Given a ! Undefined control sequence. l.15032 (predicate) function \code {f}, it creates a function which returns the ! Undefined control sequence. l.15033 logical negation of what \code {f} returns. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15034 \end{Details} ! Missing } inserted. } l.15034 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15036 \begin{SeeAlso} \relax ! Undefined control sequence. l.15037 Function \code {\LinkA{clusterMap}{clusterMap}} and \code{\LinkA{mcma... ! Undefined control sequence. l.15037 Function \code{\LinkA {clusterMap}{clusterMap}} and \code{\LinkA{mcma... ! Undefined control sequence. l.15037 ...inkA{clusterMap}{clusterMap}} and \code {\LinkA{mcmapply}{mcmapply... ! Undefined control sequence. l.15037 ...usterMap}{clusterMap}} and \code{\LinkA {mcmapply}{mcmapply}} (not ! Undefined control sequence. l.15038 Windows) in package \pkg {parallel} provide parallel versions of \cod... ! Undefined control sequence. l.15038 ...lel} provide parallel versions of \code {Map}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15039 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15041 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15042 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.15043 # # A general-purpose adder: ! You can't use `macro parameter character #' in horizontal mode. l.15043 ## A general-purpose adder: ! You can't use `macro parameter character #' in horizontal mode. l.15046 # # Like sum(), but can also used for adding matrices etc., as it will ! You can't use `macro parameter character #' in horizontal mode. l.15046 ## Like sum(), but can also used for adding matrices etc., as it will ! You can't use `macro parameter character #' in horizontal mode. l.15047 # # use the appropriate '+' method in each reduction step. ! You can't use `macro parameter character #' in horizontal mode. l.15047 ## use the appropriate '+' method in each reduction step. ! You can't use `macro parameter character #' in horizontal mode. l.15048 # # More generally, many generics meant to work on arbitrarily many ! You can't use `macro parameter character #' in horizontal mode. l.15048 ## More generally, many generics meant to work on arbitrarily many ! You can't use `macro parameter character #' in horizontal mode. l.15049 # # arguments can be defined via reduction: ! You can't use `macro parameter character #' in horizontal mode. l.15049 ## arguments can be defined via reduction: ! You can't use `macro parameter character #' in horizontal mode. l.15052 # # FOO() methods can then be provided via FOO2() methods. ! You can't use `macro parameter character #' in horizontal mode. l.15052 ## FOO() methods can then be provided via FOO2() methods. ! You can't use `macro parameter character #' in vertical mode. l.15054 # # A general-purpose cumulative adder: ! You can't use `macro parameter character #' in vertical mode. l.15054 ## A general-purpose cumulative adder: ! Missing $ inserted. $ l.15056 cadd(seq_ len(7)) ! Missing $ inserted. $ l.15057 ! You can't use `macro parameter character #' in vertical mode. l.15058 # # A simple function to compute continued fractions: ! You can't use `macro parameter character #' in vertical mode. l.15058 ## A simple function to compute continued fractions: ! You can't use `macro parameter character #' in horizontal mode. l.15060 # # Continued fraction approximation for pi: ! You can't use `macro parameter character #' in horizontal mode. l.15060 ## Continued fraction approximation for pi: ! You can't use `macro parameter character #' in horizontal mode. l.15062 # # Continued fraction approximation for Euler's number (e): ! You can't use `macro parameter character #' in horizontal mode. l.15062 ## Continued fraction approximation for Euler's number (e): [150 [121]]] Underfull \hbox (badness 4752) in paragraph at lines 7295--7307 []@textrm In ad-di-tion, you can use op-tions `@texttt --arch=[]@textrm '[], `@ texttt --no-environ[]@textrm '[], `@texttt --no-init-file[]@textrm '[], [88 ! You can't use `macro parameter character #' in vertical mode. l.15065 # # Iterative function application: ! You can't use `macro parameter character #' in vertical mode. l.15065 ## Iterative function application: ! You can't use `macro parameter character #' in horizontal mode. l.15067 # # Compute log(exp(acos(cos(0)) ! You can't use `macro parameter character #' in horizontal mode. l.15067 ## Compute log(exp(acos(cos(0)) ! You can't use `macro parameter character #' in horizontal mode. l.15069 # # n-fold iterate of a function, functional style: ! You can't use `macro parameter character #' in horizontal mode. l.15069 ## n-fold iterate of a function, functional style: ! You can't use `macro parameter character #' in horizontal mode. l.15072 # # Continued fraction approximation to the golden ratio: ! You can't use `macro parameter character #' in horizontal mode. l.15072 ## Continued fraction approximation to the golden ratio: ! You can't use `macro parameter character #' in horizontal mode. l.15074 # # which is the same as ! You can't use `macro parameter character #' in horizontal mode. l.15074 ## which is the same as ! You can't use `macro parameter character #' in horizontal mode. l.15076 # # Computing square root approximations for x as fixed points of the ! You can't use `macro parameter character #' in horizontal mode. l.15076 ## Computing square root approximations for x as fixed points of the ! You can't use `macro parameter character #' in horizontal mode. l.15077 # # function t |-> (t + x / t) / 2, as a function of the initial value: ! You can't use `macro parameter character #' in horizontal mode. l.15077 ## function t |-> (t + x / t) / 2, as a function of the initial value: ! You can't use `macro parameter character #' in horizontal mode. l.15079 asqrt(2, 30)(10) # Starting from a positive value => +sqrt(2) ! You can't use `macro parameter character #' in horizontal mode. l.15080 asqrt(2, 30)(-1) # Starting from a negative value => -sqrt(2) ! You can't use `macro parameter character #' in vertical mode. l.15082 # # A list of all functions in the base environment: ! You can't use `macro parameter character #' in vertical mode. l.15082 ## A list of all functions in the base environment: ! You can't use `macro parameter character #' in horizontal mode. l.15084 # # Functions in base with more than 10 arguments: ! You can't use `macro parameter character #' in horizontal mode. l.15084 ## Functions in base with more than 10 arguments: ! You can't use `macro parameter character #' in horizontal mode. l.15086 # # Number of functions in base with a '...' argument: ! You can't use `macro parameter character #' in horizontal mode. l.15086 ## Number of functions in base with a '...' argument: ! You can't use `macro parameter character #' in vertical mode. l.15091 # # Find all objects in the base environment which are *not* functions: ! You can't use `macro parameter character #' in vertical mode. l.15091 ## Find all objects in the base environment which are *not* functions: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15093 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15094 \end{Examples} ! Undefined control sequence. l.15095 \HeaderA {gc}{Garbage Collection}{gc} ! Undefined control sequence. l.15096 \aliasA {gcinfo}{gc}{gcinfo} ! U]ndefined control sequence. l.15097 \keyword {environment}{gc} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15099 \begin{Description} \relax ! Undefined control sequence. l.15100 A call of \code {gc} causes a garbage collection to take place. ! Undefined control sequence. l.15101 \code {gcinfo} sets a flag so that ! Undefined control sequence. l.15102 ...atic collection is either silent (\code {verbose = FALSE}) or ! Undefined control sequence. l.15103 prints memory usage statistics (\code {verbose = TRUE}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15104 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15106 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15111 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15113 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15114 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15115 \item[\code{verbose}] logical; if \code{TRUE}, the garbage collectio... ! Undefined control sequence. l.15115 \item[\code{verbose}] logical; if \code {TRUE}, the garbage collectio... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15117 \item[\code{reset}] logical; if \code{TRUE} the values for maximum s... ! Undefined control sequence. l.15117 \item[\code{reset}] logical; if \code {TRUE} the values for maximum s... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15119 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15120 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15122 \begin{Details} \relax ! Undefined control sequence. l.15123 A call of \code {gc} causes a garbage collection to take place. ! Undefined control sequence. l.15125 primary purpose of calling \code {gc} is for the report on memory usage. ! Undefined control sequence. l.15127 However, it can be useful to call \code {gc} after a large object ! Undefined control sequence. l.15128 has been removed, as this may prompt \R {} to return memory to the ! Undefined control sequence. l.15131 \R {} allocates space for vectors in multiples of 8 bytes: hence the ! Undefined control sequence. l.15132 report of \code {"Vcells"}, a relict of an earlier allocator (that used ! Undefined control sequence. l.15135 When \code {gcinfo(TRUE)} is in force, messages are sent to the message ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15137 \begin{alltt} Garbage collection 12 = 10+0+2 (level 0) ... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15140 \end{alltt} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15146 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15148 \begin{Value} ! Undefined control sequence. l.15149 \code {gc} returns a matrix with rows \code{"Ncells"} (\emph{cons ! Undefined control sequence. l.15149 \code{gc} returns a matrix with rows \code {"Ncells"} (\emph{cons ! Undefined control sequence. l.15151 64-bit systems, and \code {"Vcells"} (\emph{vector cells}, 8 bytes ! Undefined control sequence. l.15152 each), and columns \code {"used"} and \code{"gc trigger"}, ! Undefined control sequence. l.15152 each), and columns \code{"used"} and \code {"gc trigger"}, ! Undefined control sequence. l.15155 If maxima have been set for either \code {"Ncells"} or \code{"Vcells"}, ! Undefined control sequence. l.15155 ...set for either \code{"Ncells"} or \code {"Vcells"}, ! Undefined control sequence. l.15157 \code {NA} denoting no limit). ! Undefined control sequence. l.15160 to \code {gc(reset = TRUE)} (or since \R{} started). ! Undefined control sequence. l.15160 to \code{gc(reset = TRUE)} (or since \R {} started). [151 [122 [89]] ! Undefined control sequence. l.15162 \code {gcinfo} returns the previous value of the flag. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15163 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15165 \begin{SeeAlso} \relax ! Undefined control sequence. l.15168 \code {\LinkA{Memory}{Memory}} on \R{}'s memory management, ! Undefined control sequence. l.15168 \code{\LinkA {Memory}{Memory}} on \R{}'s memory management, ! Undefined control sequence. l.15168 \code{\LinkA{Memory}{Memory}} on \R {}'s memory management, ! Undefined control sequence. l.15169 and \code {\LinkA{gctorture}{gctorture}} if you are an \R{} developer. ! Undefined control sequence. l.15169 and \code{\LinkA {gctorture}{gctorture}} if you are an \R{} developer. ! Undefined control sequence. l.15169 ...gctorture}{gctorture}} if you are an \R {} developer. ! Undefined control sequence. l.15171 \code {\LinkA{reg.finalizer}{reg.finalizer}} for actions to happen at... ! Undefined control sequence. l.15171 \code{\LinkA {reg.finalizer}{reg.finalizer}} for actions to happen at... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15173 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15175 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15176 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.15178 gc() # - do it now ! You can't use `macro parameter character #' in horizontal mode. l.15179 gcinfo(TRUE) # -- in the future, show when R does it ! You can't use `macro parameter character #' in horizontal mode. l.15181 gcinfo(verbose = FALSE) # -- don't show it anymore ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15186 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15187 \end{Examples} ! Undefined control sequence. l.15188 \HeaderA {gc.time}{Report Time Spent in Garbage Collection}{gc.time} ! Undefined control sequence. l.15189 \keyword {utilities}{gc.time} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.15191 \begin{Description} \relax ! Undefined control sequence. l.15193 the \R {} session while GC timing was enabled. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15194 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15196 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15200 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15202 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15203 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15204 \item[\code{on}] logical; if \code{TRUE}, GC timing is enabled. ! Undefined control sequence. l.15204 \item[\code{on}] logical; if \code {TRUE}, GC timing is enabled. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15205 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15206 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15208 \begin{Details} \relax ! Undefined control sequence. l.15211 This is a \LinkA {primitive}{primitive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15212 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15214 \begin{Value} ! Undefined control sequence. l.15221 be given as \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15222 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15224 \begin{SeeAlso} \relax ! Undefined control sequence. l.15225 \code {\LinkA{gc}{gc}}, ! Undefined control sequence. l.15225 \code{\LinkA {gc}{gc}}, ! Undefined control sequence. l.15226 \code {\LinkA{proc.time}{proc.time}} for the timings for the session. ! Undefined control sequence. l.15226 \code{\LinkA {proc.time}{proc.time}} for the timings for the session. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15227 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15229 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15230 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15232 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15233 \end{Examples} ! Undefined control sequence. l.15234 \HeaderA {gctorture}{Torture Garbage Collector}{gctorture} ! Undefined control sequence. l.15235 \aliasA {gctorture2}{gctorture}{gctorture2} ! Undefined control sequence. l.15236 \aliasA {R\_GCTORTURE}{gctorture}{R.Rul.GCTORTURE} ! Undefined control sequence. l.15237 \aliasA {R\_GCTORTURE\_INHIBIT\_RELEASE}{gctorture}{R.Rul.GCTORTURE.R... ! Undefined control sequence. l.15238 \aliasA {R\_GCTORTURE\_WAIT}{gctorture}{R.Rul.GCTORTURE.Rul.WAIT} ! Undefined control sequence. l.15239 \keyword {environment}{gctorture} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15241 \begin{Description} \relax ! Undefined control sequence. l.15243 ... memory protection bugs. Also makes \R {} run ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15245 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15247 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 15220--15248 \OT1/cmr/m/n/10 tor-ture2gctorturegctortur [123 [90e2 R[]GCTORTUREgctortureR.Rul.GCTORTU RE Overfull \hbox (89.7452pt too wide) in paragraph at lines 15220--15248 \OT1/cmr/m/n/10 R[]GCTORTURE[]INHIBIT[]RELEASEgctortureR.Rul.GCTORTURE.Rul.INHI BIT.Rul.RELEASE Underfull \hbox (badness 10000) in paragraph at lines 15220--15248 \OT1/cmr/m/n/10 R[]GCTORTURE[]WAITgctortureR.Rul.GCTORTURE.Rul.WAIT en-vi-ron- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15252 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15254 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15255 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15256 \item[\code{on}] logical; turning it on/off. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15257 \item[\code{step}] integer; run GC every \code{step} allocations; \c... ! Undefined control sequence. l.15257 ...code{step}] integer; run GC every \code {step} allocations; \code{... ! Undefined control sequence. l.15257 ...GC every \code{step} allocations; \code {step ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15259 \item[\code{wait}] integer; number of allocations to wait before sta... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15261 \item[\code{inhibit\_release}] logical; do not release free objects for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15263 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15264 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15266 \begin{Details} \relax ! Undefined control sequence. l.15267 Calling \code {gctorture(TRUE)} instructs the memory manager to force a ! Undefined control sequence. l.15268 full GC on every allocation. \code {gctorture2} provides a more refined ! Undefined control sequence. l.15270 ...option of running a GC only every \code {step} ! Undefined control sequence. l.15273 The third argument to \code {gctorture2} is only used if R has been ! Undefined control sequence. l.15279 ...mes free and is reallocated. The \code {inhibit\_release} ! Undefined control sequence. l.15284 \code {gctorture2} can also be invoked via environment variables at the [152]] Appendix C] [91] ! Undefined control sequence. l.15285 start of the \R {} session. \env{R\_GCTORTURE} corresponds to the ! Undefined control sequence. l.15285 start of the \R{} session. \env {R\_GCTORTURE} corresponds to the ! Undefined control sequence. l.15286 \code {step} argument, \env{R\_GCTORTURE\_WAIT} to \code{wait}, and ! Undefined control sequence. l.15286 \code{step} argument, \env {R\_GCTORTURE\_WAIT} to \code{wait}, and ! Undefined control sequence. l.15286 ...ment, \env{R\_GCTORTURE\_WAIT} to \code {wait}, and ! Undefined control sequence. l.15287 \env {R\_GCTORTURE\_INHIBIT\_RELEASE} to \code{inhibit\_release}. ! Undefined control sequence. l.15287 ...\_GCTORTURE\_INHIBIT\_RELEASE} to \code {inhibit\_release}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15288 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15290 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15292 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15294 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15296 \end{Author} ! Undefined control sequence. l.15297 \HeaderA {get}{Return the Value of a Named Object}{get} ! Undefined control sequence. l.15298 \aliasA {dynGet}{get}{dynGet} ! Undefined control sequence. l.15299 \aliasA {mget}{get}{mget} ! Undefined control sequence. l.15300 \keyword {data}{get} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15302 \begin{Description} \relax ! Undefined control sequence. l.15303 Search by name for an object (\code {get}) or zero or more objects ! Undefined control sequence. l.15304 (\code {mget}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15305 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15307 \begin{Usage} Underfull \hbox (badness 1655) in paragraph at lines 15284--15308 \OT1/cmr/m/n/10 of the ses-sion. R[]GCTORTURE cor-re-sponds to the step ar-gu- ment, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15317 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15319 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15320 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15321 \item[\code{x}] For \code{get}, an object name (given as a character ! Undefined control sequence. l.15321 \item[\code{x}] For \code {get}, an object name (given as a character ! Undefined control sequence. l.15323 For \code {mget}, a character vector of object names. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15325 \item[\code{pos, envir}] where to look for the object (see `Details'... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15328 \item[\code{mode}] the mode or type of object sought: see the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15330 \item[\code{inherits}] should the enclosing frames of the environmen... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15332 \item[\code{ifnotfound}] For \code{mget}, a \code{\LinkA{list}{list}... ! Undefined control sequence. l.15332 \item[\code{ifnotfound}] For \code {mget}, a \code{\LinkA{list}{list}... ! Undefined control sequence. l.15332 ...e{ifnotfound}] For \code{mget}, a \code {\LinkA{list}{list}} of va... ! Undefined control sequence. l.15332 ...found}] For \code{mget}, a \code{\LinkA {list}{list}} of values to ! Undefined control sequence. l.15335 For \code {dynGet} any \R{} object, e.g., a call to ! Undefined control sequence. l.15335 For \code{dynGet} any \R {} object, e.g., a call to ! Undefined control sequence. l.15336 \code {\LinkA{stop}{stop}()}. ! Undefined control sequence. l.15336 \code{\LinkA {stop}{stop}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15337 \item[\code{minframe}] integer specifying the minimal frame number t... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15339 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15340 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15342 \begin{Details} \relax ! Undefined control sequence. l.15343 The \code {pos} argument can specify the environment in which to look ! Undefined control sequence. l.15345 position in the \code {\LinkA{search}{search}} list); as the characte... ! Undefined control sequence. l.15345 position in the \code{\LinkA {search}{search}} list); as the characte... ! Undefined control sequence. l.15347 \code {\LinkA{environment}{environment}} (including using \code{\Link... ! Undefined control sequence. l.15347 \code{\LinkA {environment}{environment}} (including using \code{\Link... ! Undefined control sequence. l.15347 ...t}{environment}} (including using \code {\LinkA{sys.frame}{sys.fra... ! Undefined control sequence. l.15347 ...ronment}} (including using \code{\LinkA {sys.frame}{sys.frame}} ! Undefined control sequence. l.15349 \code {-1} indicates the current environment of the call to ! Undefined control sequence. l.15350 \code {get}. The \code{envir} argument is an alternative way to ! Undefined control sequence. l.15350 \code{get}. The \code {envir} argument is an alternative way to ! Undefined control sequence. l.15353 ...ook to see if each of the name(s) \code {x} have a ! Undefined control sequence. l.15354 ...in the specified environment. If \code {inherits} is ! Undefined control sequence. l.15355 \code {TRUE} and a value is not found for \code{x} in the specified ! Undefined control sequence. l.15355 ...RUE} and a value is not found for \code {x} in the specified ! Undefined control sequence. l.15357 until the name \code {x} is encountered. See \code{\LinkA{environmen... ! Undefined control sequence. l.15357 ...ame \code{x} is encountered. See \code {\LinkA{environment}{envir... ! Undefined control sequence. l.15357 ...de{x} is encountered. See \code{\LinkA {environment}{environment}} ! Undefined control sequence. l.15361 If \code {mode} is specified then only objects of that type are sought. ! Undefined control sequence. l.15362 \code {mode} here is a mixture of the meanings of \code{\LinkA{typeof... ! Undefined control sequence. l.15362 ...e is a mixture of the meanings of \code {\LinkA{typeof}{typeof}} ! Undefined control sequence. l.15362 ...mixture of the meanings of \code{\LinkA {typeof}{typeof}} ! Undefined control sequence. l.15363 and \code {\LinkA{mode}{mode}}: \code{"function"} covers primitive fu... ! Undefined control sequen [124ce. l.15363 and \code{\LinkA {mode}{mode}}: \code{"function"} covers primitive fu... ! Undefined control sequence. l.15363 and \code{\LinkA{mode}{mode}}: \code {"function"} covers primitive fu... ! Undefined control sequence. l.15364 and operators, \code {"numeric"}, \code{"integer"} and \code{"double"} ! Undefined control sequence. l.15364 and operators, \code{"numeric"}, \code {"integer"} and \code{"double"} ! Undefined control sequence. l.15364 ...{"numeric"}, \code{"integer"} and \code {"double"} ! Undefined control sequence. l.15365 all refer to any numeric type, \code {"symbol"} and \code{"name"} are ! Undefined control sequence. l.15365 ...numeric type, \code{"symbol"} and \code {"name"} are ! Undefined control sequence. l.15366 equivalent \emph{but} \code {"language"} must be used (and not ! Undefined control sequence. l.15367 \code {"call"} or \code{"("}). ! Undefined control sequence. l.15367 \code{"call"} or \code {"("}). ! Undefined control sequence. l.15369 For \code {mget}, the values of \code{mode} and \code{ifnotfound} can ! Undefined control sequence. l.15369 For \code{mget}, the values of \code {mode} and \code{ifnotfound} can ! Undefined control sequence. l.15369 ...t}, the values of \code{mode} and \code {ifnotfound} can ! Undefined control sequence. l.15370 be either the same length as \code {x} or of length 1. The argument ! Undefined control sequence. l.15371 \code {ifnotfound} must be a list containing either the value to use if ! Undefined control sequence. l.15376 \code {dynGet()} is somewhat experimental and to be used \emph{inside} ! Undefined control sequence. l.15378 the \code {\LinkA{sys.frame}{sys.frame}()}s of the function. Use wit... ! Undefined control sequence. l.15378 the \code{\LinkA {sys.frame}{sys.frame}()}s of the function. Use wit... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15379 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15381 \begin{Value} ! Undefined control sequence. l.15382 For \code {get}, the object found. If no object is found an error re... [153 [92]]] ! Undefined control sequence. l.15384 For \code {mget}, a named list of objects (found or specified \emph{via} ! Undefined control sequence. l.15385 \code {ifnotfound}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15386 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15388 \begin{Note} \relax ! Undefined control sequence. l.15389 The reverse (or ``inverse'') of \code {a <- get(nam)} is ! Undefined control sequence. l.15390 \code {\LinkA{assign}{assign}(nam, a)}, assigning \code{a} to name \c... ! Undefined control sequence. l.15390 \code{\LinkA {assign}{assign}(nam, a)}, assigning \code{a} to name \c... ! Undefined control sequence. l.15390 ...sign}{assign}(nam, a)}, assigning \code {a} to name \code{nam}. ! Undefined control sequence. l.15390 ..., a)}, assigning \code{a} to name \code {nam}. ! Undefined control sequence. l.15392 \code {inherits = TRUE} is the default for \code{get} in \R{} ! Undefined control sequence. l.15392 ...herits = TRUE} is the default for \code {get} in \R{} ! Undefined control sequence. l.15392 ...UE} is the default for \code{get} in \R {} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15394 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15396 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15400 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15402 \begin{SeeAlso} \relax ! Undefined control sequence. l.15403 \code {\LinkA{exists}{exists}} for checking whether an object exists; ! Undefined control sequence. l.15403 \code{\LinkA {exists}{exists}} for checking whether an object exists; ! Undefined control sequence. l.15404 \code {\LinkA{get0}{get0}} for an efficient way of both checking exis... ! Undefined control sequence. l.15404 \code{\LinkA {get0}{get0}} for an efficient way of both checking exis... ! Undefined control sequence. l.15407 \code {\LinkA{assign}{assign}}, the inverse of \code{get()}, see above. ! Undefined control sequence. l.15407 \code{\LinkA {assign}{assign}}, the inverse of \code{get()}, see above. ! Undefined control sequence. l.15407 ...{assign}{assign}}, the inverse of \code {get()}, see above. ! Undefined control sequence. l.15409 Use \code {\LinkA{getAnywhere}{getAnywhere}} for searching for an object ! Undefined control sequence. l.15409 Use \code{\LinkA {getAnywhere}{getAnywhere}} for searching for an object ! Undefined control sequence. l.15411 \code {\LinkA{getFromNamespace}{getFromNamespace}} to find an object ... ! Undefined control sequence. l.15411 \code{\LinkA {getFromNamespace}{getFromNamespace}} to find an object ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15413 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15415 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15416 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.15419 # # test mget ! You can't use `macro parameter character #' in vertical mode. l.15419 ## test mget ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15422 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15423 \end{Examples} ! Undefined control sequence. l.15424 \HeaderA {getDLLRegisteredRoutines}{Reflectance Information for C/For... ! Undefined control sequence. l.15425 \methaliasA {getDLLRegisteredRoutines.character}{getDLLRegisteredRout... ! Undefined control sequence. l.15426 \methaliasA {getDLLRegisteredRoutines.DLLInfo}{getDLLRegisteredRoutin... ! Undefined control sequence. l.15427 \aliasA {print.DLLRegisteredRoutines}{getDLLRegisteredRoutines}{print... ! Undefined control sequence. l.15428 \aliasA {print.NativeRoutineList}{getDLLRegisteredRoutines}{print.Nat... ! Undefined control sequence. l.15429 \keyword {interface}{getDLLRegisteredRoutines} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15431 \begin{Description} \relax ! Undefined control sequence. l.15438 i.e.~\code {\LinkA{.C}{.C}}, \code{\LinkA{.Call}{.Call}}, \code{\Link... ! Undefined control sequence. l.15438 i.e.~\code{\LinkA {.C}{.C}}, \code{\LinkA{.Call}{.Call}}, \code{\Link... ! Undefined control sequence. l.15438 i.e.~\code{\LinkA{.C}{.C}}, \code {\LinkA{.Call}{.Call}}, \code{\Link... ! Undefined control sequence. l.15438 i.e.~\code{\LinkA{.C}{.C}}, \code{\LinkA {.Call}{.Call}}, \code{\Link... ! Undefined control sequence. l.15438 ...C}}, \code{\LinkA{.Call}{.Call}}, \code {\LinkA{.Fortran}{.Fortran}} ! Undefined control sequence. l.15438 ...ode{\LinkA{.Call}{.Call}}, \code{\LinkA {.Fortran}{.Fortran}} ! Undefined control sequence. l.154 [125 Appendix D [93]]39 and \code {\LinkA{.External}{.External}}. ! Undefined control sequence. l.15439 and \code{\LinkA {.External}{.External}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15440 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15442 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 get-DLL-Reg-is-tere-dRou-ti-nes-Re-flectance In-for-ma-tion for C/Fortran rou- Underfull \hbox (badness 10000) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 tines in a DLL-get-DLL-Reg-is-tere-dRou-tines get-DLL-Reg-is-te re-dRou- Underfull \hbox (badness 10000) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 tines.charactergetDLLRegisteredRoutinesgetDLLRegisteredRoutines .character Overfull \hbox (88.6119pt too wide) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 get-DLL-Reg-is-tere-dRou-tines.DLLInfogetDLLRegisteredRoutinesg etDLLRegisteredRoutines.DLLInfo Overfull \hbox (30.0562pt too wide) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 print.DLLRegisteredRoutinesgetDLLRegisteredRoutinesprint.DLLReg isteredRoutines Underfull \hbox (badness 1112) in paragraph at lines 15419--15443 \OT1/cmr/m/n/10 print.NativeRoutineListgetDLLRegisteredRoutinesprint.NativeRout ineList in- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15446 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15448 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15449 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15450 \item[\code{dll}] a character string or \code{DLLInfo} object. ! Undefined control sequence. l.15450 ...\code{dll}] a character string or \code {DLLInfo} object. ! Undefined control sequence. l.15453 \file {.dll} or \file{.so}) and with no directory/path information. ! Undefined control sequence. l.15453 \file{.dll} or \file {.so}) and with no directory/path information. ! Undefined control sequence. l.15454 So a file \file {MyPackage/libs/MyPackage.so} would be specified as ! Undefined control sequence. l.15455 \samp {MyPackage}. ! Undefined control sequence. l.15457 The \code {DLLInfo} objects can be obtained directly ! Undefined control sequence. l.15458 in calls to \code {\LinkA{dyn.load}{dyn.load}} and \code{\LinkA{libr... ! Undefined control sequence. l.15458 in calls to \code{\LinkA {dyn.load}{dyn.load}} and \code{\LinkA{libr... ! Undefined control sequence. l.15458 ...{\LinkA{dyn.load}{dyn.load}} and \code (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.vrs {\LinkA{library.dynam}{lib... ! Undefined control sequence. l.15458 ...{dyn.load}{dyn.load}} and \code{\LinkA {library.dynam}{library.dy... ! Undefined control sequence. l.15460 \code {\LinkA{getLoadedDLLs}{getLoadedDLLs}}, which returns a list of ! Undefined control sequence. l.15460 \code{\LinkA {getLoadedDLLs}{getLoadedDLLs}}, which returns a list of ! Undefined control sequence. l.15461 \code {DLLInfo} objects (index-able by DLL file name). ! Undefined control sequence. l.15463 The \code {DLLInfo} approach avoids any ambiguities related to two ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15467 \item[\code{addNames}] a logical value. If this is \code{TRUE}, the... ! Undefined control sequence. l.15467 ...es}] a logical value. If this is \code {TRUE}, the elements ! Undefined control sequence. l.15469 ...ia registration or raw name). If \code {FALSE}, ! Undefined control sequence. l.15472 available in the \code {NativeSymbolInfo} objects in the lists. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15474 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15475 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15477 \begin{Details} \relax ! Undefined control sequence. l.15482 There is \code {print} methods for the class, which prints only the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15484 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15486 \begin{Value} ! Undefined control sequence. l.15487 A list of class \code {"DLLRegisteredRoutines"} with four elements ! Undefined control sequence. l.15488 ...o the routines registered for the \code {.C}, ! Undefined control sequence. l.15489 \code {.Call}, \code{.Fortran} and \code{.External} interfaces. Each is ! Undefined control sequence. l.15489 \code{.Call}, \code {.Fortran} and \code{.External} interfaces. Each is ! Undefined control sequence. l.15489 \code{.Call}, \code{.Fortran} and \code {.External} interfaces. Each is [154 [126]] ! Undefined control sequence. l.15494 of class \code {"NativeSymbolInfo"}. ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15496 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15497 \item[\code{name}] the registered name of the routine (not necessari... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15499 \item[\code{address}] the memory address of the routine as resolved ... ! Undefined control sequence. l.15500 loaded DLL. This may be \code {NULL} if the symbol has not yet been ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15502 \item[\code{dll}] an object of class \code{DLLInfo} describing the DLL. ! Undefined control sequence. l.15502 \item[\code{dll}] an object of class \code {DLLInfo} describing the DLL. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15504 \item[\code{numParameters}] the number of arguments the native routi... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15508 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15509 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15511 \begin{Author} \relax ! Undefined control sequence. l.15512 Duncan Temple Lang \email {duncan@wald.ucdavis.edu} ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15513 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15515 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15519 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15521 \begin{SeeAlso} \relax ! Undefined control sequence. l.15522 \code {\LinkA{getLoadedDLLs}{getLoadedDLLs}}, ! Undefined control sequence. l.15522 \code{\LinkA {getLoadedDLLs}{getLoadedDLLs}}, ! Undefined control sequence. l.15523 \code {\LinkA{getNativeSymbolInfo}{getNativeSymbolInfo}} for informat... ! Undefined control sequence. l.15523 \code{\LinkA {getNativeSymbolInfo}{getNativeSymbolInfo}} for informat... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15524 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15526 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15527 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15532 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15533 \end{Examples} ! Undefined control sequence. l.15534 \HeaderA {getLoadedDLLs}{Get DLLs Loaded in Current Session}{getLoade... ! Undefined control sequence. l.15535 \aliasA {\$.DLLInfo}{getLoadedDLLs}{.Rdol..DLLInfo} ! Undefined control sequence. l.15536 \aliasA {DLLInfo}{getLoadedDLLs}{DLLInfo} ! Undefined control sequence. l.15537 \aliasA {DLLInfoList}{getLoadedDLLs}{DLLInfoList} ! Undefined control sequence. l.15538 \aliasA {print.DLLInfo}{getLoadedDLLs}{print.DLLInfo} ! Undefined control sequence. l.15539 \aliasA {print.DLLInfoList}{getLoadedDLLs}{print.DLLInfoList} ! Undefined control sequence. l.15540 \keyword {interface}{getLoadedDLLs} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15542 \begin{Description} \relax ! Undefined control sequence. l.15544 \code {\LinkA{dyn.load}{dyn.load}}) that are currently loaded in the ... ! Undefined control sequence. l.15544 \code{\LinkA {dyn.load}{dyn.load}}) that are currently loaded in the ... ! Undefined control sequence. l.15544 ...}}) that are currently loaded in the \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15545 \end{Description} ! LaTeX [127Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15547 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 15531--15548 []\OT1/cmr/m/n/10 getDLLRegisteredRoutines("stats") get-Loaded-DLLs-Get DLLs Underfull \hbox (badness 10000) in paragraph at lines 15531--15548 \OT1/cmr/m/n/10 Loaded in Cur-rent Ses-sionget-Loaded-DLLs $.DLLInfo-get-Loaded - Underfull \hbox (badness 10000) in paragraph at lines 15531--15548 \OT1/cmr/m/n/10 DLLs.Rdol..DLLInfo DLLInfo-get-Loaded-DLLs-DLLInfo DLLInfoList- get- Underfull \hbox (badness 10000) in paragraph at lines 15531--15548 \OT1/cmr/m/n/10 Loaded-DLLs-DLLInfoList print.DLLInfogetLoadedDLLsprint.DLLInfo Underfull \hbox (badness 10000) in paragraph at lines 15531--15548 \OT1/cmr/m/n/10 print.DLLInfoListgetLoadedDLLsprint.DLLInfoList in-ter-faceget- Loaded-DLLs ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15551 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15553 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15555 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15557 \begin{Value} ! Undefined control sequence. l.15558 An object of class \code {"DLLInfoList"} which is a list with an ! Undefined control sequence. l.15560 ...ach element is an object of class \code {"DLLInfo"} which ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15563 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15564 \item[\code{name}] the abbreviated name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15565 \item[\code{path}] the fully qualified name of the loaded DLL. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15566 \item[\code{dynamicLookup}] a logical value indicating whether R use... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.15569 \item[\code{handle}] a reference to the C-level data structure that ! Undefined control sequence. l.15571 This is an object of class \code {"DLLHandle"}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15573 \end{ldescription} ! Undefined control sequence. l.15574 Note that the class \code {DLLInfo} has an overloaded method for ! Undefined control sequence. l.15575 \code {\$} which can be used to resolve native symbols within that ! Undefined control sequence. l.15577 above using \code {[[}, e.g.~\code{x[["name"]]} or \code{x[["handle"]]}. ! Undefined control sequence. l.15577 above using \code{[[}, e.g.~\code {x[["name"]]} or \code{x[["handle"]]}. ! Undefined control sequence. l.15577 ...e{[[}, e.g.~\code{x[["name"]]} or \code {x[["handle"]]}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15578 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15580 \begin{Note} \relax ! Undefined control sequence. l.15581 We are starting to use the \code {handle} elements in the DLL object to ! Undefined control sequence. l.15582 resolve symbols more directly in \R {}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15583 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15585 \begin{Author} \relax ! Undefined control sequence. l.15586 Duncan Temple Lang \email {duncan@wald.ucdavis.edu}. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15587 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15589 \begin{SeeAlso} \relax ! Undefined control sequence. l.15590 \code {\LinkA{getDLLRegisteredRoutines}{getDLLRegisteredRoutines}}, ! Undefined control sequence. l.15590 \code{\LinkA {getDLLRegisteredRoutines}{getDLLRegisteredRoutines}}, ! Undefined control sequence. l.15591 \code {\LinkA{getNativeSymbolInfo}{getNativeSymbolInfo}} ! Undefined control sequence. l.15591 \code{\LinkA {getNativeSymbolInfo}{getNativeSymbolInfo}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [94 l.15592 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15594 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15595 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15597 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15598 \end{Examples} ! Undefined control sequence. l.15599 \HeaderA {getNativeSymbolInfo}{Obtain a Description of one or more Na... ! Undefined control sequence. l.15600 \aliasA {NativeSymbol}{getNativeSymbolInfo}{NativeSymbol} ! Undefined control sequence. l.15601 \aliasA {NativeSymbolInfo}{getNativeSymbolInfo}{NativeSymbolInfo} ! Undefined control sequence. l.15602 \aliasA {RegisteredNativeSymbol}{getNativeSymbolInfo}{RegisteredNativ... ! Undefined control sequence. l.15603 \keyword {interface}{getNativeSymbolInfo} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15605 \begin{Description} \relax ! Undefined control sequence. l.15610 ...nterface it should be called (i.e \code {\LinkA{.Call}{.Call}}, ! Undefined control sequence. l.15610 ...e it should be called (i.e \code{\LinkA {.Call}{.Call}}, ! Undefined control sequence. l.15611 \code {\LinkA{.C}{.C}}, \code{\LinkA{.Fortran}{.Fortran}}, or ! Undefined control sequence. l.15611 \code{\LinkA {.C}{.C}}, \code{\LinkA{.Fortran}{.Fortran}}, or ! Undefined control sequence. l.15611 \code{\LinkA{.C}{.C}}, \code {\LinkA{.Fortran}{.Fortran}}, or ! Undefined control sequence. l.15611 \code{\LinkA{.C}{.C}}, \code{\LinkA {.Fortran}{.Fortran}}, or ! Undefined control sequence. l.15612 \code {\LinkA{.External}{.External}}). Additionally, it returns the a... ! Undefined control sequence. l.15612 \code{\LinkA {.External}{.External}}). Additionally, it returns the a... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15618 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15620 \begin{Usage} Underfull \hbox (badness 1648) in paragraph at lines 15574--15621 \OT1/cmr/m/n/10 DLL ob-ject to re-solve sym-bols more di-rectly in . Dun-can T em- Underfull \hbox (badness 2096) in paragraph at lines 15574--15621 \OT1/cmr/m/n/10 (C/Fortran) Sym-bol-s-get-Na-tiveSym-bol-Info Na-tiveSym-bol-ge t-Na-tiveSym-bol-In- [155] Underfull \hbox (badness 2781) in paragraph at lines 11080--11082 [][][]@smallrm You can as-sign a @smallit copy @smallrm of the ob-ject in the e n-vi-ron-ment frame @smalltt rho[] @smallrm us-ing @smalltt defineVar(symbol, [128 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15625 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15627 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15628 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15629 \item[\code{name}] the name(s) of the native symbol(s). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15631 \item[\code{PACKAGE}] an optional argument that specifies to which ! Undefined control sequence. l.15633 \code {"base"}, we search in the \R{} executable itself. ! Undefined control sequence. l.15633 \code{"base"}, we search in the \R {} executable itself. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15635 \item[\code{unlist}] a logical value which controls how the result is ! Undefined control sequence. l.15637 If \code {unlist} is \code{TRUE} and the number of symbol names in ! Undefined control sequence. l.15637 If \code{unlist} is \code {TRUE} and the number of symbol names in ! Undefined control sequence. l.15638 \code {name} is one, then the \code{NativeSymbolInfo} object ! Undefined control sequence. l.15638 \code{name} is one, then the \code {NativeSymbolInfo} object ! Undefined control sequence. l.15639 is returned. If it is \code {FALSE}, then a list ! Undefined control sequence. l.15640 of \code {NativeSymbolInfo} objects is returned. ! Undefined control sequence. l.15641 ...f the number of symbols passed in \code {name} is ! Undefined control sequence. l.15644 defaults to \code {TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15646 \item[\code{withRegistrationInfo}] a logical value indicating whethe... ! Undefined control sequence. l.15647 \code {TRUE}, to return information that was registered with \R{} about ! Undefined control sequence. l.15647 ...information that was registered with \R {} about ! Undefined control sequence. l.15649 or if \code {FALSE} to return just the address of the symbol. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15651 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15652 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15654 \begin{Details} \relax ! Undefined control sequence. l.15656 in all the native interfaces (\code {\LinkA{.Call}{.Call}}, etc.). ! Undefined control sequence. l.15656 in all the native interfaces (\code{\LinkA {.Call}{.Call}}, etc.). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15661 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15663 \begin{Value} ! Undefined control sequence. l.15664 Generally, a list of \code {NativeSymbolInfo} elements whose elements ! Undefined control sequence. l.15665 can be indexed by the elements of \code {name} in the call. Each ! Undefined control sequence. l.15666 \code {NativeSymbolInfo} object is a list containing the following ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15668 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15669 \item[\code{name}] the name of the symbol, as given by the ! Undefined control sequence. l.15670 \code {name} argument. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15671 \item[\code{address}] if \code{withRegistrationInfo} is \code{FALSE}, ! Undefined control sequence. l.15671 \item[\code{address}] if \code {withRegistrationInfo} is \code{FALSE}, ! Undefined control sequence. l.15671 ...if \code{withRegistrationInfo} is \code {FALSE}, ! Undefined control sequence. l.15675 object and of class \code {NativeSymbol}. ! Undefined control sequence. l.15676 If \code {withRegistrationInfo} is \code{TRUE} and registration ! Undefined control sequence. l.15676 If \code{withRegistrationInfo} is \code {TRUE} and registration ! Undefined control sequence. l.15678 an object of class \code {RegisteredNativeSymbol} and is a reference ! Undefined control sequence. l.15681 \code {\LinkA{.Call}{.Ca]]ll}}, \code{\LinkA{.C}{.C}}, \code{\LinkA{.Fo... ! Undefined control sequence. l.15681 \code{\LinkA {.Call}{.Call}}, \code{\LinkA{.C}{.C}}, \code{\LinkA{.Fo... ! Undefined control sequence. l.15681 \code{\LinkA{.Call}{.Call}}, \code {\LinkA{.C}{.C}}, \code{\LinkA{.Fo... ! Undefined control sequence. l.15681 \code{\LinkA{.Call}{.Call}}, \code{\LinkA {.C}{.C}}, \code{\LinkA{.Fo... ! Undefined control sequence. l.15681 ...}{.Call}}, \code{\LinkA{.C}{.C}}, \code {\LinkA{.Fortran}{.Fortran... ! Undefined control sequence. l.15681 ...}}, \code{\LinkA{.C}{.C}}, \code{\LinkA {.Fortran}{.Fortran}} and ! Undefined control sequence. l.15682 \code {\LinkA{.External}{.External}}. ! Undefined control sequence. l.15682 \code{\LinkA {.External}{.External}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15684 \item[\code{package}] a list containing 3 elements: ! Undefined control sequence. l.15688 as the value of the \code {PACKAGE} argument in [156] ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15698 \end{ldescription} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15701 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15702 \item[\code{numParameters}] the number of arguments that should be p... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15704 \end{ldescription} ! Undefined control sequence. l.15706 being \code {CRoutine}, \code{CallRoutine}, \code{FortranRoutine} or ! Undefined control sequence. l.15706 being \code{CRoutine}, \code {CallRoutine}, \code{FortranRoutine} or ! Undefined control sequence. l.15706 ...de{CRoutine}, \code{CallRoutine}, \code {FortranRoutine} or ! Undefined control sequence. l.15707 \code {ExternalRoutine} corresponding to the R interface by which it ! Undefined control sequence. l.15712 If \code {name} contains only one symbol name and \code{unlist} is ! Undefined control sequence. l.15712 ...contains only one symbol name and \code {unlist} is ! Undefined control sequence. l.15713 \code {TRUE}, then the single \code{NativeSymbolInfo} is returned ! Undefined control sequence. l.15713 \code{TRUE}, then the single \code {NativeSymbolInfo} is returned ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15715 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15717 \begin{Note} \relax ! Undefined control sequence. l.15720 ...lows us to treat native routines and \R {} functions in a similar ! Undefined control sequence. l.15721 manner, such as when passing an \R {} function to C code that makes ! Undefined control sequence. l.15723 (e.g., \code {\LinkA{nls}{nls}}). Additionally, we can resolve the s... ! Undefined control sequence. l.15723 (e.g., \code{\LinkA {nls}{nls}}). Additionally, we can resolve the s... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15726 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15728 \begin{Aut Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129hor} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15730 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15732 \begin{References} \relax ! Undefined control sequence. l.15736 (\url {https://www.r-project.org/doc/Rnews/Rnews_2001-3.pdf}). ! Missing $ inserted. $ l.15736 ...ps://www.r-project.org/doc/Rnews/Rnews_ 2001-3.pdf}). ! Extra }, or forgotten $. l.15736 ...project.org/doc/Rnews/Rnews_2001-3.pdf} ). ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15737 \end{References} ! Missing $ inserted. $ l.15737 \end{References} ! Missing } inserted. } l.15737 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15739 \begin{SeeAlso} \relax ! Undefined control sequence. l.15740 \code {\LinkA{getDLLRegisteredRoutines}{getDLLRegisteredRoutines}}, ! Undefined control sequence. l.15740 \code{\LinkA {getDLLRegisteredRoutines}{getDLLRegisteredRoutines}}, ! Undefined control sequence. l.15741 \code {\LinkA{is.loaded}{is.loaded}}, ! Undefined control sequence. l.15741 \code{\LinkA {is.loaded}{is.loaded}}, ! Undefined control sequence. l.15742 \code {\LinkA{.C}{.C}}, ! Undefined control sequence. l.15742 \code{\LinkA {.C}{.C}}, ! Undefined control sequence. l.15743 \code {\LinkA{.Fortran}{.Fortran}}, ! Undefined control sequence. l.15743 \code{\LinkA {.Fortran}{.Fortran}}, ! Undefined control sequence. l.15744 \code {\LinkA{.External}{.External}}, ! Undefined control sequence. l.15744 \code{\LinkA {.External}{.External}}, ! Undefined control sequence. l.15745 \code {\LinkA{.Call}{.Call}}, ! Undefined control sequence. l.15745 \code{\LinkA {.Call}{.Call}}, ! Undefined control sequence. l.15746 \code {\LinkA{dyn.load}{dyn.load}}. ! Undefined control sequence. l.15746 \code{\LinkA {dyn.load}{dyn.load}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15747 \end{SeeAlso} ! Undefined control sequence. l.15748 \HeaderA {gettext}{Translate Text Messages}{gettext} ! Undefined control sequence. l.15749 \aliasA {bindtextdomain}{gettext}{bindtextdomain} ! Undefined control sequence. l.15750 \aliasA {ngettext}{gettext}{ngettext} ! Undefined control sequence. l.15751 \keyword {utilities}{gettext} ! Undefined control sequence. l.15752 \keyword {character}{gettext} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. .].. l.15754 \begin{Description} \relax ! Undefined control sequence. l.15755 ...Support was enabled in this build of \R {}, attempt to ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15757 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15759 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15767 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15769 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15770 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15771 \item[\code{...}] One or more character vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15772 \item[\code{domain}] The `domain' for the translation. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15773 \item[\code{n}] a non-negative integer. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15774 \item[\code{msg1}] the message to be used in English for \code{n = 1}. ! Undefined control sequence. l.15774 ...message to be used in English for \code {n = 1}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15775 \item[\code{msg2}] the message to be used in English for \code{n = 0... ! Undefined control sequence. l.15775 ...message to be used in English for \code {n = 0, 2, 3, ...}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15776 \item[\code{dirname}] The directory in which to find translated message ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15778 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15779 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15781 \begin{Details} \relax ! Undefined control sequence. l.15782 If \code {domain} is \code{NULL} or \code{""}, and \code{gettext} ! Undefined control sequence. l.15782 If \code{domain} is \code {NULL} or \code{""}, and \code{gettext} ! Undefined control sequence. l.15782 If \code{domain} is \code{NULL} or \code {""}, and \code{gettext} ! Undefined control sequence. l.15782 ... is \code{NULL} or \code{""}, and \code {gettext} ! Undefined control sequence. l.15783 or \code {ngettext} is called from a function in the namespace of ! Undefined control sequence. l.15784 package \pkg {pkg} the domain is set to \code{"R-pkg"}. Otherwise ! Undefined control sequence. l.15784 ...ge \pkg{pkg} the domain is set to \code {"R-pkg"}. Otherwise ! Undefined control sequence. l.15789 ...ne is found. The value (logical) \code {NA} suppresses any ! Undefined control sequence. l.15792 Conventionally the domain for \R {} warning/error messages in package ! Undefined control sequence. l.15793 \pkg {pkg} is \code{"R-pkg"}, and that for C-level messages is \code{... ! Undefined control sequence. l.15793 \pkg{pkg} is \code {"R-pkg"}, and that for C-level messages is \code{... ! Undefined control sequence. l.15793 ... and that for C-level messages is \code {"pkg"}. ! Undefined control sequence. l.15795 For \code {gettext}, leading and trailing whitespace is ignored when [157] [95 ! Undefined control sequence. l.15798 \code {ngettext} is used where the message needs to vary by a single ! Undefined control sequence. l.15801 ...ften contain a single instance of \code {\%d} to be used in ! Undefined control sequence. l.15802 \code {\LinkA{sprintf}{sprintf}}. If English is used, \code{msg1} is... ! Undefined control sequence. l.15802 \code{\LinkA {sprintf}{sprintf}}. If English is used, \code{msg1} is... ! Undefined control sequence. l.15802 ...}{sprintf}}. If English is used, \code {msg1} is returned if ! Undefined control sequence. l.15803 \code {n == 1} and \code{msg2} in all other cases. ! Undefined control sequence. l.15803 \code{n == 1} and \code {msg2} in all other cases. ! Undefined control sequence. l.15805 \code {bindtextdomain} is a wrapper for the C function of the same ! Undefined control sequence. l.15806 name: your system may have a \command {man} page for it. With a ! Undefined control sequence. l.15807 non-\code {NULL} \code{dirname} it specifies where to look for message ! Undefined control sequence. l.15807 non-\code{NULL} \code {dirname} it specifies where to look for message ! Undefined control sequence. l.15808 catalogues: with \code {domain = NULL} it returns the current location. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15809 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15811 \begin{Value} ! Undefined control sequence. l.15812 For \code {gettext}, a character vector, one element per string in ! Undefined control sequence. l.15813 \code {...}. If translation is not enabled or no domain is found or ! Undefined control sequence. l.15817 For \code {ngettext}, a character string. ! Undefined control sequence. l.15819 For \code {bindtextdomain}, a character string giving the current base ! Undefined control sequence. l.15820 directory, or \code {NULL} if setting it failed. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15821 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15823 \begin{SeeAlso} \relax ! Undefined control sequence. l.15824 \code {\LinkA{stop}{stop}} and \code{\LinkA{warning}{warning}} make u... ! Undefined control sequence. l.15824 \code{\LinkA {stop}{stop}} and \code{\LinkA{warning}{warning}} make u... ! Undefined control sequence. l.15824 \code{\LinkA{stop}{stop}} and \code {\LinkA{warning}{warning}} make u... ! Undefined control sequence. l.15824 \code{\LinkA{stop}{stop}} and \code{\LinkA {warning}{warning}} make u... ! Undefined control sequence. l.15824 ...kA{warning}{warning}} make use of \code {gettext} to ! Undefined control sequence. l.15827 \code [130 {\LinkA{xgettext}{xgettext}} for extracting translatable string... ! Undefined control sequence. l.15827 \code{\LinkA {xgettext}{xgettext}} for extracting translatable string... ! Undefined control sequence. l.15827 ...extracting translatable strings from \R {} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15829 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15831 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15832 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.15833 bindtextdomain("R") # non-null if and only if NLS is enabled ! You can't use `macro parameter character #' in vertical mode. l.15840 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.15840 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.15841 # # for translation, those strings should appear in R-pkg.pot as ! You can't use `macro parameter character #' in horizontal mode. l.15841 ## for translation, those strings should appear in R-pkg.pot as ! Missing $ inserted. $ l.15843 msgid_ plural "%d variables have missing values" ! Missing $ inserted. $ l.15846 ! You can't use `macro parameter character #' in vertical mode. l.15847 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.15847 ## End(Not run) ! Undefined control sequence. l.15852 ...ontains", "contain"), "missing values\n ") ! You can't use `macro parameter character #' in vertical mode. l.15854 # # better for translators would be to use ! You can't use `macro parameter character #' in vertical mode. l.15854 ## better for translators would be to use ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15859 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15860 \end{Examples} ! Undefined control sequence. l.15861 \HeaderA {getwd}{Get or Set Working Directory}{getwd} ! Undefined control sequence. l.15862 \aliasA {setwd}{getwd}{setwd} ! Undefined control sequence. l.15863 \keyword {utilities}{getwd} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15865 \begin{Description} \relax ! Undefined control sequence. l.15866 \code {getwd} returns an absolute filepath representing the current ! Undefined control sequence. l.15867 working directory of the \R ] {} process; \code{setwd(dir)} is used to set ! Undefined control sequence. l.15867 ...ng directory of the \R{} process; \code {setwd(dir)} is used to set ! Undefined control sequence. l.15868 the working directory to \code {dir}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15869 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15871 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15876 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15878 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15879 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15880 \item[\code{dir}] A character string: \LinkA{tilde expansion}{tilde ... ! Undefined control sequence. l.15880 ...[\code{dir}] A character string: \LinkA {tilde expansion}{tilde ex... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15881 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15882 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15884 \begin{Value} ! Undefined control sequence. l.15885 \code {getwd} returns a character string or \code{NULL} if the working ! Undefined control sequence. l.15885 ...wd} returns a character string or \code {NULL} if the working ! Undefined control sequence. l.15887 ...indows the path returned will use \code {/} as the path separator ! Undefined control sequence. l.15888 ...The path will not have a trailing \code {/} ! Undefined control sequence. l.15891 \code {setwd} returns the current directory before the change, ! Undefined control sequence. l.15892 ... and with the same conventions as \code {getwd}. It will give ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15894 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15896 \begin{Note} \relax ! Undefined control sequence. l.15897 ... the return value is said to be \strong {an} absolute ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15902 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15904 \begin{SeeAlso} \relax ! Undefined control sequence. l.15905 \code {\LinkA{list.files}{list.files}} for the \emph{contents} of a d... ! Undefined control sequence. l.15905 \code{\LinkA {list.files}{list.files}} for the \emph{contents} of a d... ! Undefined control sequence. l.15907 \code {\LinkA{normalizePath}{normalizePath}} for a `canonical' path n... ! Undefined control sequence. l.15907 \code{\LinkA {normalizePath}{normalizePath}} for a `canonical' path n... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15908 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15910 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15911 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15914 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15915 \end{Examples} ! Undefined control sequence. l.15916 \HeaderA {gl}{Generate Factor Levels}{gl} ! Undefined control sequence. l.15917 \keyword {category}{gl} ! Undefined control sequence. l.15918 \keyword {arith}{gl} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15920 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15922 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15924 \begin{Usage} [158 [131]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15928 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15930 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15931 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15932 \item[\code{n}] an integer giving the number of levels. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15933 \item[\code{k}] an integer giving the number of replications. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15934 \item[\code{length}] an integer giving the length of the result. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15935 \item[\code{labels}] an optional vector of labels for the resulting ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15937 \item[\code{ordered}] a logical indicating whether the result should be ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15939 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15940 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15942 \begin{Value} ! Undefined control sequence. l.15943 The result has levels from \code {1} to \code{n} with each value ! Undefined control sequence. l.15943 ...esult has levels from \code{1} to \code {n} with each value ! Undefined control sequence. l.15944 replicated in groups of length \code {k} out to a total length of ! Undefined control se] [132quence. l.15945 \code {length}. ! Undefined control sequence. l.15947 \code {gl} is modelled on the \emph{GLIM} function of the same name. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15948 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15950 \begin{SeeAlso} \relax ! Undefined control sequence. l.15951 The underlying \code {\LinkA{factor}{factor}()}. ! Undefined control sequence. l.15951 The underlying \code{\LinkA {factor}{factor}()}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15952 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15954 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15955 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.15956 # # First control, then treatment: ! You can't use `macro parameter character #' in horizontal mode. l.15956 ## First control, then treatment: ! You can't use `macro parameter character #' in horizontal mode. l.15958 # # 20 alternating 1s and 2s ! You can't use `macro parameter character #' in horizontal mode. l.15958 ## 20 alternating 1s and 2s ! You can't use `macro parameter character #' in horizontal mode. l.15960 # # alternating pairs of 1s and 2s ! You can't use `macro parameter character #' in horizontal mode. l.15960 ## alternating pairs of 1s and 2s ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15962 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15963 \end{Examples} ! Undefined control sequence. l.15964 \HeaderA {grep}{Pattern Matching and Replacement}{grep} ! Undefined control sequence. l.15965 \aliasA {gregexpr}{grep}{gregexpr} ! Undefined control sequence. l.15966 \aliasA {grepl}{grep}{grepl} ! Undefined control sequence. l.15967 \aliasA {gsub}{grep}{gsub} ! Undefined control sequence. l.15968 \aliasA {regexec}{grep}{regexec} ! Undefined control sequence. l.15969 \aliasA {regexpr}{grep}{regexpr} ! Undefined control sequence. l.15970 \aliasA {sub}{grep}{sub} ! Undefined control sequence. l.15971 \keyword {character}{grep} ! Undefined control sequence. l.15972 \keyword {utilities}{grep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H <]return> for immediate help. ... l.15974 \begin{Description} \relax ! Undefined control sequence. l.15975 \code {grep}, \code{grepl}, \code{regexpr}, \code{gregexpr} and ! Undefined control sequence. l.15975 \code{grep}, \code {grepl}, \code{regexpr}, \code{gregexpr} and ! Undefined control sequence. l.15975 \code{grep}, \code{grepl}, \code {regexpr}, \code{gregexpr} and ! Undefined control sequence. l.15975 ...p}, \code{grepl}, \code{regexpr}, \code {gregexpr} and ! Undefined control sequence. l.15976 \code {regexec} search for matches to argument \code{pattern} within ! Undefined control sequence. l.15976 ...c} search for matches to argument \code {pattern} within ! Undefined control sequence. l.15980 \code {sub} and \code{gsub} perform replacement of the first and all ! Undefined control sequence. l.15980 \code{sub} and \code {gsub} perform replacement of the first and all ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15982 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.15984 \begin{Usage} Overfull \hbox (1.49698pt too wide) in paragraph at lines 16006--16006 []\OT1/cmtt/m/n/10 grep(pattern, x, ignore.case = FALSE, perl = FALSE, value = FALSE,[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16007 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16009 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16010 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16011 \item[\code{pattern}] character string containing a \LinkA{regular e... ! Undefined control sequence. l.16011 ...}] character string containing a \LinkA {regular expression}{regul... ! Undefined control sequence. l.16012 (or character string for \code {fixed = TRUE}) to be matched ! Undefined control sequence. l.16014 \code {\LinkA{as.character}{as.character}} to a character string if p... ! Undefined control sequence. l.16014 \code{\LinkA {as.character}{as.character}} to a character string if p... ! Undefined control sequence. l.16017 \code {regexpr} and \code{gregexpr}. ! Undefined control sequence. l.16017 \code{regexpr} and \code {gregexpr}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16018 \item[\code{x, text}] a character vector where matches are sought, o... ! Undefined control sequence. l.16019 object which can be coerced by \code {as.character} to a character ! Undefined control sequence. l.16020 vector. \LinkA {Long vectors}{Long vectors} are supported. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16021 \item[\code{ignore.case}] if \code{FALSE}, the pattern matching is \... ! Undefined control sequence. l.16021 \item[\code{ignore.case}] if \code {FALSE}, the pattern matching is \... ! Undefined control sequence. l.16022 sensitive} and if \code {TRUE}, case is ignored during matching. [159] [133 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16023 \item[\code{perl}] logical. Should Perl-compatible regexps be used? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16024 \item[\code{value}] if \code{FALSE}, a vector containing the (\code{... ! Undefined control sequence. l.16024 \item[\code{value}] if \code {FALSE}, a vector containing the (\code{... ! Undefined control sequence. l.16024 ...{FALSE}, a vector containing the (\code {integer}) ! Undefined control sequence. l.16025 indices of the matches determined by \code {grep} is returned, and if ! Undefined control sequence. l.16026 \code {TRUE}, a vector containing the matching elements themselves is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16028 \item[\code{fixed}] logical. If \code{TRUE}, \code{pattern} is a st... ! Undefined control sequence. l.16028 \item[\code{fixed}] logical. If \code {TRUE}, \code{pattern} is a st... ! Undefined control sequence. l.16028 ...fixed}] logical. If \code{TRUE}, \code {pattern} is a string to be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16030 \item[\code{useBytes}] logical. If \code{TRUE} the matching is done ! Undefined control sequence. l.16030 \item[\code{useBytes}] logical. If \code {TRUE} the matching is done ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16033 \item[\code{invert}] logical. If \code{TRUE} return indices or valu... ! Undefined control sequence. l.16033 \item[\code{invert}] logical. If \code {TRUE} return indices or valu... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16035 \item[\code{replacement}] a replacement for matched pattern in \code... ! Undefined control sequence. l.16035 ...eplacement for matched pattern in \code {sub} and ! Undefined control sequence. l.16036 \code {gsub}. Coerced to character if possible. For \code{fixed = ! Undefined control sequence. l.16036 ...ed to character if possible. For \code {fixed = ! Undefined control sequence. l.16037 ...} this can include backreferences \code {"\bsl{}1"} to ! Undefined control sequence. l.16037 ... can include backreferences \code{"\bsl )] {}1"} to ! Undefined control sequence. l.16038 \code {"\bsl{}9"} to parenthesized subexpressions of \code{pattern}. ... ! Undefined control sequence. l.16038 \code{"\bsl {}9"} to parenthesized subexpressions of \code{pattern}. ... ! Undefined control sequence. l.16038 ...o parenthesized subexpressions of \code {pattern}. For ! Undefined control sequence. l.16039 \code {perl = TRUE} only, it can also contain \code{"\bsl{}U"} or ! Undefined control sequence. l.16039 ...= TRUE} only, it can also contain \code {"\bsl{}U"} or ! Undefined control sequence. l.16039 ...} only, it can also contain \code{"\bsl {}U"} or ! Undefined control sequence. l.16040 \code {"\bsl{}L"} to convert the rest of the replacement to upper or ! Undefined control sequence. l.16040 \code{"\bsl {}L"} to convert the rest of the replacement to upper or ! Undefined control sequence. l.16041 lower case and \code {"\bsl{}E"} to end case conversion. If a ! Undefined control sequence. l.16041 lower case and \code{"\bsl {}E"} to end case conversion. If a ! Undefined control sequence. l.16043 is used with a warning. If \code {NA}, all elements in the result ! Undefined control sequence. l.16044 ...ponding to matches will be set to \code {NA}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16046 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16047 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16049 \begin{Details} \relax ! Undefined control sequence. \code l.16056 \item \code {fixed = TRUE}: use exact matching. ! Undefined control sequence. \code l.16057 \item \code {perl = TRUE}: use Perl-style regular expressions. ! Undefined control sequence. \code l.16058 \item \code {fixed = FALSE, perl = FALSE}: use POSIX 1003.2 ! Undefined control sequence. l.16063 See the help pages on \LinkA {regular expression}{regular expression}... ! Undefined control sequence. l.16066 The two \code {*sub} functions differ only in that \code{sub} replaces ! Undefined control sequence. l.16066 ...ub} functions differ only in that \code {sub} replaces ! Undefined control sequence. l.16067 only the first occurrence of a \code {pattern} whereas \code{gsub} ! Undefined control sequence. l.16067 ...rence of a \code{pattern} whereas \code {gsub} ! Undefined control sequence. l.16068 replaces all occurrences. If \code {replacement} contains ! Undefined control sequence. l.16069 ...ferences which are not defined in \code {pattern} the result is ! Undefined control sequence. l.16070 ... the backreference i [134 Appendix E [96s taken to be \code {""}). ! Undefined control sequence. l.16072 For \code {regexpr}, \code{gregexpr} and \code{regexec} it is an error ! Undefined control sequence. l.16072 For \code{regexpr}, \code {gregexpr} and \code{regexec} it is an error ! Undefined control sequence. l.16072 ...ode{regexpr}, \code{gregexpr} and \code {regexec} it is an error ! Undefined control sequence. l.16073 for \code {pattern} to be \code{NA}, otherwise \code{NA} is permitted ! Undefined control sequence. l.16073 for \code{pattern} to be \code {NA}, otherwise \code{NA} is permitted ! Undefined control sequence. l.16073 ...ttern} to be \code{NA}, otherwise \code {NA} is permitted ! Undefined control sequence. l.16074 and gives an \code {NA} match. ! Undefined control sequence. l.16076 The main effect of \code {useBytes} is to avoid errors/warnings about ! Undefined control sequence. l.16078 \code {regexpr} it changes the interpretation of the output. ! Undefined control sequence. l.16080 ...input is found which is marked as \code {"bytes"} ! Undefined control sequence. l.16081 see \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.16081 see \code{\LinkA {Encoding}{Encoding}}). ! Undefined control sequence. l.16085 \code {useBytes = TRUE}. ! Undefined control sequence. l.16087 \code {regexpr} and \code{gregexpr} with \code{perl = TRUE} allow ! Undefined control sequence. l.16087 \code{regexpr} and \code {gregexpr} with \code{perl = TRUE} allow ! Undefined control sequence. l.16087 ...regexpr} and \code{gregexpr} with \code {perl = TRUE} allow ! Undefined control sequence. l.16092 Caseless matching with \code {perl = TRUE} for non-ASCII characters ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16095 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16097 \begin{Value} ! Undefined control sequence. l.16098 \code {grep(value = FALSE)} returns a vector of the indices ! Undefined control sequence. l.16099 of the elements of \code {x} that yielded a match (or not, for ! Undefined control sequence. l.16100 \code {invert = TRUE}. This will be an integer vector unless the input [160]] [135 ! Undefined control sequence. l.16103 \code {grep(value = TRUE)} returns a character vector containing the ! Undefined control sequence. l.16104 selected elements of \code {x} (after coercion, preserving names but no ! Undefined control sequence. l.16107 \code {grepl} returns a logical vector (match or not for each element of ! Undefined control sequence. l.16108 \code {x}). ! Undefined control sequence. l.16110 \code {sub} and \code{gsub} return a character vector of the same ! Undefined control sequence. l.16110 \code{sub} and \code {gsub} return a character vector of the same ! Undefined control sequence. l.16111 ...h and with the same attributes as \code {x} (after possible ! Undefined control sequence. l.16112 ...). Elements of character vectors \code {x} which ! Undefined control sequence. l.16114 encoding). If \code {useBytes = FALSE} a non-ASCII substituted result ! Undefined control sequence. l.16116 ... and in a multibyte locale unless \code {fixed = TRUE}). ! Undefined control sequence. l.16117 Such strings can be re-encoded by \code {\LinkA{enc2native}{enc2nativ... ! Undefined control sequence. l.16117 ...rings can be re-encoded by \code{\LinkA {enc2native}{enc2native}}. ! Undefined control sequence. l.16119 \code {regexpr} returns an integer vector of the same length as ! Undefined control sequence. l.16120 \code {text} giving the starting position of the first match or ! Undefined control sequence. l.16121 \eqn {-1}{} if there is none, with attribute \code{"match.length"}, an ! Undefined control sequence. l.16121 ... if there is none, with attribute \code {"match.length"}, an ! Undefined control sequence. l.16122 ...the length of the matched text (or \eqn {-1}{} for ! Undefined control sequence. l.16124 \code {useBytes = TRUE} is used, when they are in bytes (as they are ! Undefined control sequence. l.16126 \code {useBytes} with value \code{TRUE} is set on the result). If ! Undefined control sequence. l.16126 \code{useBytes} with value \code {TRUE} is set on the result). If ! Undefined control sequence. l.16128 \code {"capture.start"}, \code{"capture.length"} and ! Undefined control sequence. l.16128 \code{"capture.start"}, \code {"capture.length"} and ! Undefined control sequence. l.16129 \code {"capture.names"}. ! Undefined control sequence. l.16131 \code {gregexpr} returns a list of the same length as \code{text} each ! Undefined control sequence. l.16131 ...urns a list of the same length as \code {text} each ! Undefined control sequence. l.16133 \code {regexpr}, except that the starting positions of every (disjoint) ! Undefined control sequence. l.16136 \code {regexec} returns a list of the same length as \code{text} each ! Undefined control sequence. l.16136 ...urns a list of the same length as \code {text} each ! Undefined control sequence. l.16137 element of which is either \eqn {-1}{} if there is no match, or a ! Undefined control sequence. l.16140 \code {pattern}, with attribute \code{"match.length"} a vector ! Undefined control sequence. l.16140 \code{pattern}, with attribute \code {"match.length"} a vector ! Undefined control sequence. l.16141 giving the lengths of the matches (or \eqn ]] {-1}{} for no match). The ! Undefined control sequence. l.16143 \code {regexpr}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16147 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16149 \begin{Section} {Warning} ! Undefined control sequence. l.16150 The POSIX 1003.2 mode of \code {gsub} and \code{gregexpr} does not ! Undefined control sequence. l.16150 ...IX 1003.2 mode of \code{gsub} and \code {gregexpr} does not ! Undefined control sequence. l.16151 ...h repeated word-boundaries (e.g., \code {pattern = ! Undefined control sequence. l.16152 "\bsl {}b"}). Use \code{perl = TRUE} for such matches (but that ma... ! Undefined control sequence. l.16152 "\bsl{}b"}). Use \code {perl = TRUE} for such matches (but that ma... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16155 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16157 \begin{Section} {Performance considerations} ! Undefined control sequence. l.16161 engine, and \code {fixed = TRUE} faster still (especially when each ! Undefined control sequence. l.16167 ...which attracts a penalty of around \eqn {3\times{}}{} for ! Missing $ inserted. $ l.16167 ...tracts a penalty of around \eqn{3\times {}}{} for ! Extra }, or forgotten $. l.16167 ...cts a penalty of around \eqn{3\times{}} {} for ! Missing $ inserted. $ l.16169 ! Undefined control sequence. l.16170 If you can make use of \code {useBytes = TRUE}, the strings will not be [161 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.cps [136]] ! Undefined control sequence. l.16176 `studying' the compiled pattern when \code {x}/\code{text} has ! Undefined control sequence. l.16176 ...he compiled pattern when \code{x}/\code {text} has ! Undefined control sequence. l.16177 length at least 10. As from \R {} 3.4.0 that study may use the PCRE JIT ! Undefined control sequence. l.16179 \code {\LinkA{pcre\_config}{pcre.Rul.config}}). The details are cont... ! Undefined control sequence. l.16179 \code{\LinkA {pcre\_config}{pcre.Rul.config}}). The details are cont... ! Undefined control sequence. l.16180 \code {\LinkA{options}{options}} \code{PCRE\_study} and \code{PCRE\_u... ! Undefined control sequence. l.16180 \code{\LinkA {options}{options}} \code{PCRE\_study} and \code{PCRE\_u... ! Undefined control sequence. l.16180 \code{\LinkA{options}{options}} \code {PCRE\_study} and \code{PCRE\_u... ! Undefined control sequence. l.16180 ...{options}} \code{PCRE\_study} and \code {PCRE\_use\_JIT}. ! Undefined control sequence. l.16182 \file {tests/PCRE.R} in the \R{} sources (and perhaps installed).) ! Undefined control sequence. l.16182 \file{tests/PCRE.R} in the \R {} sources (and perhaps installed).) ! Undefined control sequence. l.16185 \env {R\_PCRE\_JIT\_STACK\_MAXSIZE} before JIT is used to a value bet... ! Undefined control sequence. l.16186 \code {1} and \code{1000} in MB: the default is \code{64}. (Then it ! Undefined control sequence. l.16186 \code{1} and \code {1000} in MB: the default is \code{64}. (Then it ! Undefined control sequence. l.16186 ...\code{1000} in MB: the default is \code {64}. (Then it ! Undefined control sequence. l.16187 would usually be wise to set the \LinkA {option}{option} ! Undefined control sequence. l.16188 \code {PCRE\_limit\_recursion}.) ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16189 \end{Section} ! Missing } inserted. } l.16189 \end{Section} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16191 \begin{Source} \relax ! Undefined control sequence. l.16193 over the years. As from \R {} 2.10.0 (Oct 2009) the TRE library of V... ! Undefined control sequence. l.16194 Laurikari (\url {http://laurikari.net/tre/}) is used. The POSIX ! Undefined control sequence. l.16199 For Perl-style matching PCRE (\url {http://www.pcre.org}) is used: ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16201 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16203 \begin{References} \relax ! Undefined control sequence. l.16206 Wadsworth \& Brooks/Cole (\code [137 {grep}) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16207 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16209 \begin{SeeAlso} \relax ! Undefined control sequence. l.16210 \LinkA {regular expression}{regular expression} (aka \code{\LinkA{reg... ! Undefined control sequence. l.16210 ...ression}{regular expression} (aka \code {\LinkA{regexp}{regexp}}) ... ! Undefined control sequence. l.16210 ...}{regular expression} (aka \code{\LinkA {regexp}{regexp}}) for the... ! Undefined control sequence. l.16213 \code {\LinkA{regmatches}{regmatches}} for extracting matched substri... ! Undefined control sequence. l.16213 \code{\LinkA {regmatches}{regmatches}} for extracting matched substri... ! Undefined control sequence. l.16214 the results of \code {regexpr}, \code{gregexpr} and \code{regexec}. ! Undefined control sequence. l.16214 the results of \code{regexpr}, \code {gregexpr} and \code{regexec}. ! Undefined control sequence. l.16214 ...ode{regexpr}, \code{gregexpr} and \code {regexec}. ! Undefined control sequence. l.16216 \code {\LinkA{glob2rx}{glob2rx}} to turn wildcard matches into regula... ! Undefined control sequence. l.16216 \code{\LinkA {glob2rx}{glob2rx}} to turn wildcard matches into regula... ! Undefined control sequence. l.16218 \code {\LinkA{agrep}{agrep}} for approximate matching. ! Undefined control sequence. l.16218 \code{\LinkA {agrep}{agrep}} for approximate matching. ! Undefined control sequence. l.16220 \code {\LinkA{charmatch}{charmatch}}, \code{\LinkA{pmatch}{pmatch}} f... ! Undefined control sequence. l.16220 \code{\LinkA {charmatch}{charmatch}}, \code{\LinkA{pmatch}{pmatch}} f... ! Undefined control sequence. l.16220 \code{\LinkA{charmatch}{charmatch}}, \code {\LinkA{pmatch}{pmatch}} f... ! Undefined control sequence. l.16220 ...kA{charmatch}{charmatch}}, \code{\LinkA {pmatch}{pmatch}} for part... ! Undefined control sequence. l.16221 \code {\LinkA{match}{match}} for matching to whole strings, ! Undefined control sequence. l.16221 \code{\LinkA {match}{match}} for matching to whole strings, ! Undefined control sequence. l.16222 \code {\LinkA{startsWith}{startsWith}} for matching of initial parts ... ! Undefined control sequence. l.16222 \code{\LinkA {startsWith}{startsWith}} for matching of initial parts ... ! Undefined control sequence. l.16224 \code {\LinkA{tolower}{tolower}}, \code{\LinkA{toupper}{toupper}} and... ! Undefined control sequence. l.16224 \code{\LinkA {tolower}{tolower}}, \code{\LinkA{toupper}{toupper}} and... ! Undefined control sequence. l.16224 \code{\LinkA{tolower}{tolower}}, \code {\LinkA{toupper}{toupper}} and... ! Undefined control sequence. l.16224 ...\LinkA{tolower}{tolower}}, \code{\LinkA {toupper}{toupper}} and \c... ! Undefined control sequence. l.16224 ...ode{\LinkA{toupper}{toupper}} and \code {\LinkA{chartr}{chartr}} ! Undefined control sequence. l.16224 ...nkA{toupper}{toupper}} ]and \code{\LinkA {chartr}{chartr}} ! Undefined control sequence. l.16227 \code {\LinkA{apropos}{apropos}} uses regexps and has more examples. ! Undefined control sequence. l.16227 \code{\LinkA {apropos}{apropos}} uses regexps and has more examples. ! Undefined control sequence. l.16229 \code {\LinkA{grepRaw}{grepRaw}} for matching raw vectors. ! Undefined control sequence. l.16229 \code{\LinkA {grepRaw}{grepRaw}} for matching raw vectors. ! Undefined control sequence. l.16231 Options \code {PCRE\_limit\_recursion}, \code{PCRE\_study} and ! Undefined control sequence. l.16231 ...ns \code{PCRE\_limit\_recursion}, \code {PCRE\_study} and ! Undefined control sequence. l.16232 \code {PCRE\_use\_JIT}. ! Undefined control sequence. l.16234 \code {\LinkA{extSoftVersion}{extSoftVersion}} for the versions of re... ! Undefined control sequence. l.16234 \code{\LinkA {extSoftVersion}{extSoftVersion}} for the versions of re... ! Undefined control sequence. l.16235 libraries in use, \code {\LinkA{pcre\_config}{pcre.Rul.config}} for m... ! Undefined control sequence. l.16235 libraries in use, \code{\LinkA {pcre\_config}{pcre.Rul.config}} for m... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16237 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16239 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16240 \begin{ExampleCode} ! Undefined control sequence. l.16245 cat("'foo' appears at least once in\n \t", txt, "\n") (/usr/share/texmf-dist/tex/latex/base/omlcmr.fd) [97 ! Undefined control sequence. l.16245 ...appears at least once in\n\t", txt, "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.16246 i # 2 and 4 ! You can't use `macro parameter character #' in vertical mode. l.16249 # # Double all 'a' or 'b's; "\" must be escaped, i.e., 'doubled' ! You can't use `macro parameter character #' in vertical mode. l.16249 ## Double all 'a' or 'b's; "\" must be escaped, i.e., 'doubled' ! Missing $ inserted. $ l.16250 gsub("([ab])", "\\1_ \\1_", "abc and ABC") ! Missing { inserted. \let l.16250 gsub("([ab])", "\\1_\\ 1_", "abc and ABC") ! Missing $ inserted. $ l.16251 ! Missing } inserted. } l.16251 ! You can't use `macro parameter character #' in horizontal mode. l.16260 ( i <- grep("[gu]", txt) ) # indices ! You can't use `macro parameter character #' in vertical mode. l.16263 # # Note that in locales such as en_US this includes B as the ! You can't use `macro parameter character #' in vertical mode. l.16263 ## Note that in locales such as en_US this includes B as the ! Missing $ inserted. $ l.16263 ## Note that in locales such as en_ US this includes B as the ! You can't use `macro parameter character #' in math mode. l.16264 # # collation order is aAbBcCdEe ... ! You can't use `macro parameter character #' in math mode. l.16264 ## collation order is aAbBcCdEe ... ! You can't use `macro parameter character #' in math mode. l.16266 txt[ot != gsub("[b-e]",".", txt)]# - gsub does "global" substitution ! Missing $ inserted. $ l.16267 Overfull \hbox (55.454pt too wide) in paragraph at lines 16263--16267 []\OT1/cmr/m/n/10 Note that in lo-cales such as en$[]\OML/cmm/m/it/10 Sthisincl udesBasthecollationorderisaAbBcCdEe:::\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ot < Underfull \hbox (badness 10000) in paragraph at lines 16263--16267 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 sub\OT1/cmr/m/n/10 ("[\OML/cmm/m/it/10 b \ OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 e\OT1/cmr/m/n/10 ]"\OML/cmm/m/it/10 ; \OT1 /cmr/m/n/10 "\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; txt\OT1/cmr/ m/n/10 ))\OML/cmm/m/it/10 txt\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 ot\OT1/cmr/m/n/1 0 ! = \OML/cmm/m/it/10 gsub\OT1/cmr/m/n/10 ("[\OML/cmm/m/it/10 b \OMS/cmsy/m/n/ 10 ^^@ \OML/cmm/m/it/10 e\OT1/cmr/m/n/10 ]"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 " \OML/cmm/m/it/10 :\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; txt\OT1/cmr/m/n/10 )] \OM S/cmsy/m/n/10 ^^@ ! You can't use `macro parameter character #' in horizontal mode. l.16268 txt[gsub("g","# ", txt) != ! You can't use `macro parameter character #' in horizontal mode. l.16269 gsub("g","# ", txt, ignore.case = TRUE)] # the "G" words ! You can't use `macro parameter character #' in horizontal mode. l.16269 ...ub("g","#", txt, ignore.case = TRUE)] # the "G" words [162 [138]] ! You can't use `macro parameter character #' in vertical mode. l.16275 # # Using grepl() for filtering ! You can't use `macro parameter character #' in vertical mode. l.16275 ## Using grepl() for filtering ! You can't use `macro parameter character #' in horizontal mode. l.16276 # # Find functions with argument names matching "warn": ! You can't use `macro parameter character #' in horizontal mode. l.16276 ## Find functions with argument names matching "warn": ! You can't use `macro parameter character #' in horizontal mode. l.16279 ...<- nms[is.na(match(nms, c("F","T")))] # <-- work around "checking... Underfull \hbox (badness 4048) in paragraph at lines 16275--16286 []\OT1/cmr/m/n/10 Using grepl() for fil-ter-ing Find func-tions with ar-gu-men t names Underfull \hbox (badness 1997) in paragraph at lines 16275--16286 \OT1/cmr/m/n/10 match-ing "warn": find-Args <- func-tion(env, pat-tern) nms <- ls(envir Underfull \hbox (badness 2277) in paragraph at lines 16275--16286 \OT1/cmr/m/n/10 = as.environment(env)) nms <- nms[is.na(match(nms, c("F","T"))) ] <-- Underfull \hbox (badness 2005) in paragraph at lines 16275--16286 \OT1/cmr/m/n/10 work around "check-ing hack" aa <- sap-ply(nms, func-tion(.) o <- ! You can't use `macro parameter character #' in vertical mode. l.16287 # # trim trailing white space ! You can't use `macro parameter character #' in vertical mode. l.16287 ## trim trailing white space ! You can't use `macro parameter character #' in math mode. l.16289 sub(" +$", "", str) # # spaces only ! You can't use `macro parameter character #' in math mode. l.16289 sub(" +$", "", str) ## spaces only ! You can't use `macro parameter character #' in math mode. l.16290 # # what is considered 'white space' depends on the locale. ! You can't use `macro parameter character #' in math mode. l.16290 ## what is considered 'white space' depends on the locale. ! You can't use `macro parameter character #' in horizontal mode. l.16291 sub("[[:space:]]+$", "", str) # # white space, POSIX-style ! You can't use `macro parameter character #' in horizontal mode. l.16291 sub("[[:space:]]+$", "", str) ## white space, POSIX-style ! You can't use `macro parameter character #' in horizontal mode. l.16292 # # what PCRE considered white space changed in version 8.34: see ?regex ! You can't use `macro parameter character #' in horizontal mode. l.16292 ## what PCRE considered white space changed in version 8.34: see ?regex ! You can't use `macro parameter character #' in math mode. l.16293 sub("\\s+$", "", str, perl = TRUE) # # PCRE-style white space ! You can't use `macro parameter character #' in math mode. l.16293 sub("\\s+$", "", str, perl = TRUE) ## PCRE-style white space ! Missing $ inserted. $ l.16294 Underfull \hbox (badness 10000) in paragraph at lines 16287--16294 []\OT1/cmr/m/n/10 trim trail-ing white space str <- "Now is the time " sub(" Overfull \hbox (4.65784pt too wide) in paragraph at lines 16287--16294 \OT1/cmr/m/n/10 +$"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 ""\OML/cmm/m/it/10 ; str\ OT1/cmr/m/n/10 )\OML/cmm/m/it/10 spacesonlywhatisconsidered[]whitespace[]depend sonthelocale:sub\OT1/cmr/m/n/10 ("[[: ! You can't use `macro parameter character #' in vertical mode. l.16295 # # capitalizing ! You can't use `macro parameter character #' in vertical mode. l.16295 ## capitalizing ! You can't use `macro parameter character #' in vertical mode. l.16304 # # named capture ! You can't use `macro parameter character #' in vertical mode. l.16304 ## named capture ! Undefined control sequence. l.16306 "\tMillard Fillmore") ! You can't use `macro parameter character #' in horizontal mode. l.16307 # name groups 'first' and 'last' ! Missing $ inserted. $ l.16312 m <- do.call(rbind, lapply(seq_ along(res), function(i) { ! Extra }, or forgotten $. l.16319 } ! Missing $ inserted. $ l.16321 Underfull \hbox (badness 10000) in paragraph at lines 16304--16321 []\OT1/cmr/m/n/10 named cap-ture no-ta-bles <- c(" Ben Franklin and Jef-fer-son Underfull \hbox (badness 10000) in paragraph at lines 16304--16321 \OT1/cmr/m/n/10 Davis", "Fill-more") name groups 'first' and 'last' name.rex < - Underfull \hbox (badness 10000) in paragraph at lines 16304--16321 \OT1/cmr/m/n/10 "(?[[:upper:]][[:lower:]]+) (?[[:upper:]][[:lower: ]]+)" (parsed <- Underfull \hbox (badness 4217) in paragraph at lines 16304--16321 \OT1/cmr/m/n/10 reg-expr(name.rex, no-ta-bles, perl = TRUE)) greg-expr(name.rex , no-ta- Overfull \hbox (451.3317pt too wide) in paragraph at lines 16304--16321 \OT1/cmr/m/n/10 lapply(seq$[]\OML/cmm/m/it/10 long\OT1/cmr/m/n/10 (\OML/cmm/m/i t/10 res\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; function\OT1/cmr/m/n/10 (\OML/cmm/m /it/10 i\OT1/cmr/m/n/10 )[]))\OML/cmm/m/it/10 colnames\OT1/cmr/m/n/10 (\OML/cmm /m/it/10 m\OT1/cmr/m/n/10 ) \OML/cmm/m/it/10 < [163]] ! You can't use `macro parameter character #' in vertical mode. l.16322 # # Decompose a URL into its components. ! You can't use `macro parameter character #' in vertical mode. l.16322 ## Decompose a URL into its components. ! You can't use `macro parameter character #' in horizontal mode. l.16323 # # Example by LT (http://www.cs.uiowa.edu/~luke/R/regexp.html). ! You can't use `macro parameter character #' in horizontal mode. l.16323 ## Example by LT (http://www.cs.uiowa.edu/~luke/R/regexp.html). ! Missing $ inserted. $ l.16325 m <- regexec("^ (([^:]+)://)?([^:/]+)(:([0-9]+))?(/.*)", x) ! You can't use `macro parameter character #' in math mode. l.16328 # # Element 3 is the protocol, 4 is the host, 6 is the port, and 7 ! You can't use `macro parameter character #' in math mode. l.16328 ## Element 3 is the protocol, 4 is the host, 6 is the port, and 7 ! You can't use `macro parameter character #' in math mode. l.16329 # # is the path. We can use this to make a function for extracting the ! You can't use `macro parameter character #' in math mode. l.16329 ## is the path. We can use this to make a function for extracting the ! You can't use `macro parameter character #' in math mode. l.16330 # # parts of a URL: ! You can't use `macro parameter character #' in math mode. l.16330 ## parts of a URL: ! Missing $ inserted. $ l.16339 Underfull \hbox (badness 10000) in paragraph at lines 16322--16339 []\OT1/cmr/m/n/10 Decompose a URL into its com-po-nents. Ex-am-ple Underfull \hbox (badness 10000) in paragraph at lines 16322--16339 \OT1/cmr/m/n/10 by LT (http://www.cs.uiowa.edu/ luke/R/regexp.html). x <- Underfull \hbox (badness 1281) in paragraph at lines 16322--16339 \OT1/cmr/m/n/10 "http://stat.umn.edu:80/xyz" m <- regexec("$[]([[]]+) : \OML/cm m/m/it/10 ==\OT1/cmr/m/n/10 )?([[]\OML/cmm/m/it/10 =\OT1/cmr/m/n/10 ]+)(: ([0 \ OMS/cmsy/m/n/10 ^^@ Overfull \hbox (367.5642pt too wide) in paragraph at lines 16322--16339 \OT1/cmr/m/n/10 9]+))?(\OML/cmm/m/it/10 =:\OMS/cmsy/m/n/10 ^^C\OT1/cmr/m/n/10 ) "\OML/cmm/m/it/10 ; x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 mregmatches\OT1/cmr/m/n/ 10 (\OML/cmm/m/it/10 x; m\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Element\OT1/cmr/m/n/ 10 3\OML/cmm/m/it/10 istheprotocol; \OT1/cmr/m/n/10 4\OML/cmm/m/it/10 isthehost ; \OT1/cmr/m/n/10 6\OML/cmm/m/it/10 istheport; and\OT1/cmr/m/n/10 7\OML/cmm/m/i t/10 isthepath:WecanusethistomakeafunctionforextractingthepartsofaURL \OT1/cmr/ m/n/10 : Overfull \hbox (678.40494pt too wide) in paragraph at lines 16322--16339 \OML/cmm/m/it/10 URL[]arts < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 function\OT1/ cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )[]\OML/cmm/m/it/10 URL[]arts\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )$ ! You can't use `macro parameter character #' in vertical mode. l.16340 # # There is no gregexec() yet, but one can emulate it by running ! You can't use `macro parameter character #' in vertical mode. l.16340 ## There is no gregexec() yet, but one can emulate it by running ! You can't use `macro parameter character #' in horizontal mode. l.16341 # # regexec() on the regmatches obtained via gregexpr(). E.g.: ! You can't use `macro parameter character #' in horizontal mode. l.16341 ## regexec() on the regmatches obtained via gregexpr(). E.g.: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16346 \end{ExampleCode} ! Missing } inserted. } l.16346 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ) [139 Appendix F [98] l.16347 \end{Examples} ! Undefined control sequence. l.16348 \HeaderA {grepRaw}{Pattern Matching for Raw Vectors}{grepRaw} ! Undefined control sequence. l.16349 \keyword {utilities}{grepRaw} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16351 \begin{Description} \relax ! Undefined control sequence. l.16352 \code {grepRaw} searches for substring \code{pattern} matches within a ! Undefined control sequence. l.16352 ...e{grepRaw} searches for substring \code {pattern} matches within a ! Undefined control sequence. l.16353 raw vector \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16354 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16356 \begin{Usage} Underfull \hbox (badness 1946) in paragraph at lines 16340--16357 \OT1/cmr/m/n/10 on the reg-matches ob-tained via greg-expr(). E.g.: pat-tern <- "([[:al- Overfull \hbox (1.49698pt too wide) in paragraph at lines 16360--16360 [] \OT1/cmtt/m/n/10 value = FALSE, fixed = FALSE, all = FALSE, invert = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16361 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16363 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16364 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16365 \item[\code{pattern}] raw vector containing a \LinkA{regular express... ! Undefined control sequence. l.16365 ...attern}] raw vector containing a \LinkA {regular expression}{regul... ! Undefined control sequence. l.16366 (or fixed pattern for \code {fixed = TRUE}) to be matched in the ! Undefined control sequence. l.16367 given raw vector. Coerced by \code {\LinkA{charToRaw}{charToRaw}} to... ! Undefined control sequence. l.16367 given raw vector. Coerced by \code{\LinkA {charToRaw}{charToRaw}} to... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16369 \it] [99em[\code{x}] a raw vector where matches are sought, or an object ... ! Undefined control sequence. l.16370 be coerced by \code {charToRaw} to a raw vector. \LinkA{Long vectors... ! Undefined control sequence. l.16370 ...ode{charToRaw} to a raw vector. \LinkA {Long vectors}{Long vectors} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16372 \item[\code{ignore.case}] if \code{FALSE}, the pattern matching is \... ! Undefined control sequence. l.16372 \item[\code{ignore.case}] if \code {FALSE}, the pattern matching is \... ! Undefined control sequence. l.16373 sensitive} and if \code {TRUE}, case is ignored during matching. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16374 \item[\code{offset}] An integer specifying the offset from ! Undefined control sequence. l.16376 ...s defined to be at that offset so \code {"\textasciicircum{}"} wil... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16377 \item[\code{value}] logical. Determines the return value: see `Value'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16378 \item[\code{fixed}] logical. If \code{TRUE}, \code{pattern} is a pa... ! Undefined control sequence. l.16378 \item[\code{fixed}] logical. If \code {TRUE}, \code{pattern} is a pa... ! Undefined control sequence. l.16378 ...fixed}] logical. If \code{TRUE}, \code {pattern} is a pattern to be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16380 \item[\code{all}] logical. If \code{TRUE} all matches are returned, ! Undefined control sequence. l.16380 \item[\code{all}] logical. If \code {TRUE} all matches are returned, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16382 \item[\code{invert}] logical. If \code{TRUE} return indices or valu... ! Undefined control sequence. l.16382 \item[\code{invert}] logical. If \code {TRUE} return indices or valu... ! Undefined control sequence. l.16384 \code {value = TRUE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16385 \end{ldescription} ! LaTeX Er]ror: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16386 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16388 \begin{Details} \relax ! Undefined control sequence. l.16389 Unlike \code {\LinkA{grep}{grep}}, seeks matching patterns within the... ! Undefined control sequence. l.16389 Unlike \code{\LinkA {grep}{grep}}, seeks matching patterns within the... ! Undefined control sequence. l.16390 vector \code {x} . This has implications especially in the \code{all = ! Undefined control sequence. l.16390 ...as implications especially in the \code {all = ! Undefined control sequence. l.16394 The argument \code {invert} is interpreted as asking to return the ! Undefined control sequence. l.16395 ...tch, which is only meaningful for \code {value = ! Undefined control sequence. l.16396 TRUE}. Argument \code {offset} determines the start of the search,... ! Undefined control sequence. l.16397 of the complement. Note that \code {invert = TRUE} with \code{all = ! Undefined control sequence. l.16397 ...te that \code{invert = TRUE} with \code {all = ! Undefined control sequence. l.16398 TRUE} will split \code {x} into pieces delimited by the pattern ! Undefined control sequence. l.16400 regular expressions with \code {"\textasciicircum{}"} or \code{"\$"} ... ! Undefined control sequence. l.16400 ...th \code{"\textasciicircum{}"} or \code {"\$"} in that case may ! Undefined control sequence. l.16403 ...combinations of arguments such as \code {fixed = TRUE} with ! Undefined control sequence. l.16404 \code {value = TRUE} are supported but are less meaningful. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16405 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16407 \begin{Value} ! Undefined control sequence. l.16408 \code {grepRaw(value = FALSE)} returns an integer vector of the offsets ! Undefined control sequence. l.16409 at which matches have occurred. If \code {all = FALSE} then it will be ! Undefined control sequence. l.16413 \code {grepRaw(value = TRUE, all = FALSE)} returns a raw vector which ! Undefined control sequence. l.16414 ...(no match) or the matched part of \code {x}. ! Undefined control sequence. l.16416 \code {grepRaw(value = TRUE, all = TRUE)} returns a (potentially ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16418 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16420 \begin{Source} \relax ! Undefined control sequence. l.16421 The TRE library of Ville Laurikari (\url {http://laurikari.net/tre/}) ! Undefined control sequence. l.16422 is used except for \code {fixed = TRUE}. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16423 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16425 \begin{SeeAlso} \relax ! Undefined control sequence. l.16426 \LinkA {regular expression}{regular expression} (aka \code{\LinkA{reg... ! Undefined control sequence. l.16426 ...ression}{regular expression} (aka \code {\LinkA{regexp}{regexp}}) ... ! Undefined control sequence. l.16426 ...}{regular expression} (aka \code{\LinkA {regexp}{regexp}}) for the... [164 [140 ) (see the transcript file for additional information) ! Undefined control sequence. l.16429 \code {\LinkA{grep}{grep}} for matching character vectors. ! Undefined control sequence. l.16429 \code{\LinkA {grep}{grep}} for matching character vectors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16430 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16432 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16433 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.16434 grepRaw("no match", "textText") # integer(0): no match ! You can't use `macro parameter character #' in horizontal mode. l.16435 grepRaw("adf", "adadfadfdfadadf") # 3 - the first match ! You can't use `macro parameter character #' in horizontal mode. l.16437 # # [1] 3 6 13 -- three matches ! You can't use `macro parameter character #' in horizontal mode. l.16437 ## [1] 3 6 13 -- three matches ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16438 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16439 \end{Examples} ! Undefined control sequence. l.16440 \HeaderA {groupGeneric}{S3 Group Generic Functions}{groupGeneric} ! Undefined control sequence. l.16441 \aliasA {.Group}{groupGeneric}{.Group} ! Undefined control sequence. l.16442 \aliasA {Complex}{groupGeneric}{Complex} ! Undefined control sequence. l.16443 \aliasA {group generic}{groupGeneric}{group generic} ! Undefined control sequence. l.16444 \aliasA {Math}{groupGeneric}{Math} ! Undefined control sequence. l.16445 \methaliasA {Math.data.frame}{groupGeneric}{Math.data.frame} ! Undefined control sequence. l.16446 \aliasA {Ops}{groupGeneric}{Ops} ! Undefined control sequence. l.16447 \methaliasA {Ops.data.frame}{groupGeneric}{Ops.data.frame} ! Undefined control sequence. l.16448 \aliasA {S3groupGeneric}{groupGeneric}{S3groupGeneric} ! Undefined control sequence. l.16449 \aliasA {Summary}{groupGeneric}{Summary} ! Undefined control sequence. l.16450 \methaliasA {Summary.data.frame}{groupGeneric}{Summary.data.frame} ! Undefined control sequence. l.16451 \keyword {methods}{groupGeneric} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16453 \begin{Description} \relax ! Undefined control sequence. l.16455 functions, \code {Math}, \code{Ops}, \code{Summary} and \code{Complex}. ! Undefined control sequence. l.16455 functions, \code{Math}, \code for immediate help. ... l.16461 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16463 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16471 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16473 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16474 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16475 \item[\code{x, z, e1, e2}] objects. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16476 \item[\code{...}] > Overfull \hbox (22.06111pt too wide) in paragraph at lines 12183--12183 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [141 further arguments passed to methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16477 \item[\code{na.rm}] logical: should missing values be removed? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16478 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16479 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16481 \begin{Details} \relax ! Undefined control sequence. l.16485 namely the \code {"Math"}, \code{"Ops"}, \code{"Summary"} and ! Undefined control sequence. l.16485 namely the \code{"Math"}, \code {"Ops"}, \code{"Summary"} and ! Undefined control sequence. l.16485 ... the \code{"Math"}, \code{"Ops"}, \code {"Summary"} and ! Undefined control sequence. l.16486 \code {"Complex"} groups. These are not \R{} objects in base \R{}, but ! Undefined control sequence. l.16486 \code{"Complex"} groups. These are not \R {} objects in base \R{}, but ! Undefined control sequence. l.16486 ... These are not \R{} objects in base \R {}, but ! Undefined control sequence. l.16487 ...ds can be supplied for them and base \R {} contains ! Undefined control sequence. l.16488 \code {\LinkA{factor}{factor}}, \code{\LinkA{data.frame}{data.frame}}... ! Undefined control sequence. l.16488 \code{\LinkA {factor}{factor}}, \code{\LinkA{data.frame}{data.frame}}... ! Undefined control sequence. l.16488 \code{\LinkA{factor}{factor}}, \code {\LinkA{data.frame}{data.frame}}... ! Undefined control sequence. l.16488 ...e{\LinkA{factor}{factor}}, \code{\LinkA {data.frame}{data.frame}} and ! Undefined control sequence. l.16489 \code {\LinkA{difftime}{difftime}} methods for the first three groups... ! Undefined control sequence. l.16489 \code{\LinkA {difftime}{difftime}} methods for the first three groups... ! Undefined control sequence. l.16490 also a \code {\LinkA{ordered}{ordered}} method for \code{Ops}, ! Undefined control sequence. l.16490 also a \code{\LinkA {ordered}{ordered}} method for \code{Ops}, ! Undefined control sequence. l.16490 ...nkA{ordered}{ordered}} method for \code {Ops}, ! Undefined control sequence. l.16491 \code {\LinkA{POSIXt}{POSIXt}} and \code{\LinkA{Date}{Date}} methods ... ! Undefined control sequence. l.16491 \code{\LinkA {POSIXt}{POSIXt}} and \code{\LinkA{Date}{Date}} methods ... ! Undefined control sequence. l.16491 \code{\LinkA{POSIXt}{POSIXt}} and \code {\LinkA{Date}{Date}} methods ... ! Undefined control sequence. l.16491 ...LinkA{POSIXt}{POSIXt}} and \code{\LinkA {Date}{Date \code l.16502 \code {abs}, \code{sign}, \code{sqrt},\\{} ! Undefined control sequence. l.16502 \code{abs}, \code {sign}, \code{sqrt},\\{} ! Undefined control sequence. l.16502 \code{abs}, \code{sign}, \code {sqrt},\\{} ! Undefined control sequence. l.16503 \code {floor}, \code{ceiling}, \code{trunc},\\{} ! Undefined control sequence. l.16503 \code{floor}, \code {ceiling}, \code{trunc},\\{} ! Undefined control sequence. l.16503 \code{floor}, \code{ceiling}, \code {trunc},\\{} ! Undefined control sequence. l.16504 \code {round}, \code{signif} ! Undefined control sequence. l.16504 \code{round}, \code {signif} ! Undefined control sequence. \code l.16507 \code {exp}, \code{log}, \code{expm1}, \code{log1p},\\{} ! Undefined control sequence. l.16507 \code{exp}, \code {log}, \code{expm1}, \code{log1p},\\{} ! Undefined control sequence. l.16507 \code{exp}, \code{log}, \code {expm1}, \code{log1p},\\{} ! Undefined control sequence. l.16507 ...{exp}, \code{log}, \code{expm1}, \code {log1p},\\{} ! Undefined control sequence. l.16508 \code {cos}, \code{sin}, \code{tan},\\{} ! Undefined control sequence. l.16508 \code{cos}, \code {sin}, \code{tan},\\{} ! Undefined control sequence. l.16508 \code{cos}, \code{sin}, \code {tan},\\{} ! Undefined control sequence. l.16509 \code {cospi}, \code{sinpi}, \code{tanpi},\\{} ! Undefined control sequence. l.16509 \code{cospi}, \code {sinpi}, \code{tanpi},\\{} ! Undefined control sequence. l.16509 \code{cospi}, \code{sinpi}, \code {tanpi},\\{} ! Undefined control sequence. l.16510 \code {acos}, \code{asin}, \code{atan} ! Undefined control sequence. l.16510 \code{acos}, \code {asin}, \code{atan} ! Undefined control sequence. l.16510 \code{acos}, \code{asin}, \code {atan} ! Undefined control sequence. l.16512 \code {cosh}, \code{sinh}, \code{tanh},\\{} ! Undefined control sequence. l.16512 \code{cosh}, \code {sinh}, \code{tanh},\\{} ! Undefined control sequence. l.16512 \code{cosh}, \code{sinh}, \code {tanh},\\{} ! Undefined control sequence. l.16513 \code {acosh}, \code{asinh}, \code{atanh} ! Undefined control sequence. l.16513 \code{acosh}, \code {asinh}, \code{atanh} ! Undefined control sequence. l.16513 \code{acosh}, \code{asinh}, \code {atanh} ! Undefined control sequence. \code l.16516 \code {lgamma}, \code{gamma}, \code{digamma}, \code{trigamma} ! Undefined control sequence. l.16516 \code{lgamma}, \code {gamma}, \code{digamma}, \code{trigamma} ! Undefined control sequence. l.16516 \code{lgamma}, \code{gamma}, \code {digamma}, \code{trigamma} ! Undefined control sequence. l.16516 ...a}, \code{gamma}, \code{digamma}, \code {trigamma} [165>] \code l.16526 \item \code {cumsum}, \code{cumprod}, \code{cummax}, \code{cummin} ! Undefined control sequence. l.16526 \item \code{cumsum}, \code {cumprod}, \code{cummax}, \code{cummin} ! Undefined control sequence. l.16526 \item \code{cumsum}, \code{cumprod}, \code {cummax}, \code{cummin} ! Undefined control sequence. l.16526 ...}, \code{cumprod}, \code{cummax}, \code {cummin} ! Undefined control sequence. l.16531 Members of this group dispatch on \code {x}. Most members accept ! Undefined control sequence. l.16532 only one argument, but members \code {log}, \code{round} and ! Undefined control sequence. l.16532 ...argument, but members \code{log}, \code {round} and ! Undefined control sequence. l.16533 \code {signif} accept one or two arguments, and \code{trunc} accepts ! Undefined control sequence. l.16533 ... accept one or two arguments, and \code {trunc} accepts ! Undefined control sequence. l.16536 \item Group \code {"Ops"}: ! Undefined control sequence. \code l.16540 \code {"+"}, \code{"-"}, \code{"*"}, \code{"/"}, ! Undefined control sequence. l.16540 \code{"+"}, \code {"-"}, \code{"*"}, \code{"/"}, ! Undefined control sequence. l.16540 \code{"+"}, \code{"-"}, \code {"*"}, \code{"/"}, ! Undefined control sequence. l.16540 \code{"+"}, \code{"-"}, \code{"*"}, \code {"/"}, ! Undefined control sequence. l.16541 \code {"\textasciicircum{}"}, \code{"\%\%"}, \code{"\%/\%"} ! Undefined control sequence. l.16541 \code{"\textasciicircum{}"}, \code {"\%\%"}, \code{"\%/\%"} ! Undefined control sequence. l.16541 ...xtasciicircum{}"}, \code{"\%\%"}, \code {"\%/\%"} ! Undefined control sequence. \code l.16544 \item \code {"\&"}, \code{"|"}, \code{"!"} ! Undefined control sequence. l.16544 \item \code{"\&"}, \code {"|"}, \code{"!"} ! Undefined control sequence. l.16544 \item \code{"\&"}, \code{"|"}, \code {"!"} ! Undefined control sequence. \code l.16547 \item \code {"=="}, \code{"!="}, ! Undefined control sequence. l.16547 \item \code{"=="}, \code {"!="}, ! Undefined control sequence. l.16548 \code {"<"}, \code{"<="}, \code{">="}, \code{">"} ! Undefined control sequence. l.16548 \code{"<"}, \code {"<="}, \code{">="}, \code{">"} ! Undefined control sequence. l.16548 \code{"<"}, \code{"<="}, \code {">="}, \code{">"} ! Undefined control sequence. l.16548 ...e{"<"}, \code{"<="}, \code{">="}, \code {">"} ! Undefined control sequence. l.16553 ... both binary and unary operators (\code {+}, ! Undefined control sequence. l.16554 \code {-} and \code{!}): when a unary operator is encountered the ! Undefined control sequence. l.16554 \code{-} and \code {!}): when a unary operator is encountered the ! Undefined control sequence. l.16555 \code {Ops} method is called with one argument and \code{e2} is ! Undefined control sequence. l.16555 ...d is called with one argument and \code {e2} is ! Undefined control sequence. l.16561 \code > \code l.16573 \item \code {all}, \code{any} ! Undefined control sequence. l.16573 \item \code{all}, \code {any} ! Undefined control sequence. \code l.16575 \item \code {sum}, \code{prod} ! Undefined control sequence. l.16575 \item \code{sum}, \code {prod} ! Undefined control sequence. \code l.16577 \item \code {min}, \code{max} ! Undefined control sequence. l.16577 \item \code{min}, \code {max} ! Undefined control sequence. \code l.16579 \item \code {range} ! Undefined control sequence. l.16585 \item Group \code {"Complex"}: ! Undefined control sequence. \code l.16588 \item \code {Arg}, \code{Conj}, \code{Im}, \code{Mod}, \code{Re} ! Undefined control sequence. l.16588 \item \code{Arg}, \code {Conj}, \code{Im}, \code{Mod}, \code{Re} ! Undefined control sequence. l.16588 \item \code{Arg}, \code{Conj}, \code {Im}, \code{Mod}, \code{Re} ! Undefined control sequence. l.16588 ...ode{Arg}, \code{Conj}, \code{Im}, \code {Mod}, \code{Re} ! Undefined control sequence. l.16588 ...ode{Conj}, \code{Im}, \code{Mod}, \code {Re} ! Undefined control sequence. l.16593 Members of this group dispatch on \code {z}. ! Undefined control sequence. l.16599 ...emph{only} if it corresponds to a \code {"class"} attribute, ! Undefined control sequence. l.16600 as the internal code dispatches on \code {\LinkA{oldClass}{oldClass}}... ! Undefined control sequence. l.16600 ...nternal code dispatches on \code{\LinkA {oldClass}{oldClass}} and ... ! Undefined control sequence. l.16601 \code {\LinkA{class}{class}}. This is for efficiency: having to disp... ! Undefined control sequence. l.16601 \code{\LinkA {class}{class}}. This is for efficiency: having to disp... ! Undefined control sequence. l.16602 say, \code {Ops.integer} would be too slow. ! Undefined control sequence. l.16605 \code {"Math"} group generic methods is not checked prior to dispatch. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16608 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16610 \begin{Section} {Technical Details} ! Undefined control sequence. l.16611 ... functions are all primitive and \LinkA {internal generic}{interna... ! Undefined control sequence. l.16613 ...od dispatch and variables such as \code {.Generic} ! Undefined control sequence. l.16614 are discussed in the help for \code {\LinkA{UseMethod}{UseMethod}}. ... ! Undefined control sequence. l.16614 are discussed in the help for \code{\LinkA {UseMethod}{UseMethod}}. ... ! Undefined control sequence. l.16618 \item For the operators of group \code {Ops}, the object ! Undefined control sequence. l.16619 \code {.Method} is a length-two character vector with elements the ! Undefined control sequence. l.16621 ...ted, the corresponding element is \code {""}.) [166 [142>] for immediate help. ... l.16627 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16629 \begin{Note} \relax ! Undefined control sequence. l.16630 Package \pkg {methods} does contain objects with these names, which it ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16633 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16635 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16640 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16642 \begin{SeeAlso} \relax ! Undefined control sequence. l.16643 \code {\LinkA{methods}{methods}} for methods of non-internal generic ... ! Undefined control sequence. l.16643 \code{\LinkA {methods}{methods}} for methods of non-internal generic ... ! Undefined control sequence. l.16645 \LinkA {S4groupGeneric}{S4groupGeneric} for group generics for S4 met... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16646 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16648 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16649 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.16653 class(1 + d.fr) == "data.frame" # #-- add to d.f. ... ! You can't use `macro parameter character #' in horizontal mode. l.16653 class(1 + d.fr) == "data.frame" ## -- add to d.f. ... ! You can't use `macro parameter character #' in horizontal mode. l.16658 methods("Complex") # none in base R ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for imme> for immediate help. ... l.16660 \end{Examples} ! Undefined control sequence. l.16661 \HeaderA {grouping}{Grouping Permutation}{grouping} ! Undefined control sequence. l.16662 \keyword {manip}{grouping} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16664 \begin{Description} \relax ! Undefined control sequence. l.16665 \code {grouping} returns a permutation which rearranges its first ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16669 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16671 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 16655--16672 []\OT1/cmr/m/n/10 methods("Math") meth-ods("Ops") meth-ods("Summary") meth- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16675 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16677 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16678 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16679 \item[\code{...}] a sequence of numeric, character or logical ! Undefined control sequence. l.16680 ...all of the same length, or a classed \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16681 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16682 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.166]> $ l.16694 \eqn{2^ {31}}{} or more elements). Real-valued numbers are slightly ! Extra }, or forgotten $. l.16694 \eqn{2^{31}} {} or more elements). Real-valued numbers are slightly ! Missing $ inserted. $ l.16696 Underfull \hbox (badness 2088) in paragraph at lines 16691--16696 []\OT1/cmr/m/n/10 Under the cov-ers, the "radix" method of or-derorder is used, and ! Undefined control sequence. l.16697 Like \code {order}, for a classed \R{} object the grouping is based on ! Undefined control sequence. l.16697 Like \code{order}, for a classed \R {} object the grouping is based on ! Undefined control sequence. l.16698 the result of \code {\LinkA{xtfrm}{xtfrm}}. ! Undefined control sequence. l.16698 the result of \code{\LinkA {xtfrm}{xtfrm}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16699 \end{Details} ! Missing } inserted. } l.16699 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16701 \begin{Value} ! Undefined control sequence. l.16702 An object of class \code {"grouping"}, the representation of which ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16705 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16706 \item[\code{ends}] subscripts in the result corresponding to the last ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16708 \item[\code{maxgrpn}] the maximum group size ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16709 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... > l.16710 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16712 \begin{SeeAlso} \relax ! Undefined control sequence. l.16713 \code {\LinkA{order}{order}}, \code{\LinkA{xtfrm}{xtfrm}}. ! Undefined control sequence. l.16713 \code{\LinkA {order}{order}}, \code{\LinkA{xtfrm}{xtfrm}}. ! Undefined control sequence. l.16713 \code{\LinkA{order}{order}}, \code {\LinkA{xtfrm}{xtfrm}}. ! Undefined control sequence. l.16713 \code{\LinkA{order}{order}}, \code{\LinkA {xtfrm}{xtfrm}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16714 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16716 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16717 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.16719 # # 6 5 2 1 7 4 10 8 3 9 ! You can't use `macro parameter character #' in horizontal mode. l.16719 ## 6 5 2 1 7 4 10 8 3 9 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16721 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16722 \end{Examples} ! Undefined control sequence. l.16723 \HeaderA {gzcon}{(De)compress I/O Through Connections}{gzcon} ! Undefined control sequence. l.16724 \keyword {file}{gzcon} ! Undefined control sequence. l.16725 \keyword {connection}{gzcon} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16727 \begin{Description} \relax ! Undefined control sequence. l.16728 \code {gzcon} provides a modified connection that wraps an existing ! Undefined control sequence. l.16730 connection. Standard \code {gzip} headers are assumed. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16731 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16733 \begin{Usage} for immediate help. ... l.16737 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16739 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16740 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16741 \item[\code{con}] a connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16742 \item[\code{level}] integer between 0 and 9, the compression level w... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16743 \item[\code{allowNonCompressed}] logical. When reading, should [167>] for immediate help. ... l.16745 \item[\code{text}] logical. Should the connection be text-oriented? ... ! Undefined control sequence. l.16747 If \code {TRUE}, \code{\LinkA{pushBack}{pushBack}} works on the conne... ! Undefined control sequence. l.16747 If \code{TRUE}, \code {\LinkA{pushBack}{pushBack}} works on the conne... ! Undefined control sequence. l.16747 If \code{TRUE}, \code{\LinkA {pushBack}{pushBack}} works on the conne... ! Undefined control sequence. l.16748 otherwise \code {\LinkA{readBin}{readBin}} and friends apply. ! Undefined control sequence. l.16748 otherwise \code{\LinkA {readBin}{readBin}} and friends apply. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16749 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16750 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16752 \begin{Details} \relax ! Undefined control sequence. l.16753 If \code {con} is open then the modified connection is opened. Closing ! Undefined control sequence. l.16756 ...onnection which does not supply a \code {gzip} magic ! Undefined control sequence. l.16758 \code {allowNonCompressed} is true, otherwise an error. ! Undefined control sequence. l.16760 ...ontain embedded NUL bytes, and so \code {con} ! Undefined control sequence. l.16761 is not permitted to be a \code {\LinkA{textConnection}{textConnection... ! Undefined control sequence. l.16761 is not permitted to be a \code{\LinkA {textConnection}{textConnection... ! Undefined control sequence. l.16762 \code {open = "w"}. Use a writable \code{\LinkA{rawConnection}{rawCo... ! Undefined control sequence. l.16762 \code{open = "w"}. Use a writable \code {\LinkA{rawConnection}{rawCo... ! Undefined control sequence. l.16762 ...en = "w"}. Use a writable \code{\LinkA {rawConnection}{rawConnect... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16768 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16770 \begin{Value} ! Undefined control sequence. l.16771 An object inheriting from class \code {"connection"}. This is the same ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H rn> for immediate help. ... l.16774 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16776 \begin{SeeAlso} \relax ! Undefined control sequence. l.16777 \code {\LinkA{gzfile}{gzfile}} ! Undefined control sequence. l.16777 \code{\LinkA {gzfile}{gzfile}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16778 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16780 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16781 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.16782 # # Uncompress a data file from a URL ! You can't use `macro parameter character #' in horizontal mode. l.16782 ## Uncompress a data file from a URL ! You can't use `macro parameter character #' in horizontal mode. l.16784 # read.table can only read from a text-mode connection. Underfull \hbox (badness 10000) in paragraph at lines 16765--16790 \OT1/cmr/m/n/10 z <- gz-con(url("http://www.stats.ox.ac.uk/pub/datasets/csb/ch1 2.dat.gz")) ! You can't use `macro parameter character #' in vertical mode. l.16792 # # gzfile and gzcon can inter-work. ! You can't use `macro parameter character #' in vertical mode. l.16792 ## gzfile and gzcon can inter-work. ! You can't use `macro parameter character #' in horizontal mode. l.16793 # # Of course here one would use gzfile, but file() can be replaced by ! You can't use `macro parameter character #' in horizontal mode. l.16793 ## Of course here one would use gzfile, but file() can be replaced by ! You can't use `macro parameter character #' in horizontal mode. l.16794 # # any other connection generator. ! You can't use `macro parameter character #' in horizontal mode. l.16794 ## any other connection generator. ! Undefined control sequence. l.16796 ...", "", "11 13 17", file = zz, sep = "\n ") ! Undefined control sequence. l.16803 ...", "", "11 13 17", file = zz, sep = "\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16808 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16809 \end{Examples} ! Undefined control sequence. l.16810 \HeaderA {hexmode}{Display Numbers in Hexadecimal}{hexmode} ! Undefined control sequence. l.16811 \aliasA {"!.hexmode}{hexmode}{!.hexmode} ! Undefined control sequence. l.16812 \aliasA {\&.hexmode}{hexmode}{.Ramp..hexmode} ! Undefined control sequence. l.16813 \aliasA {as.character.hexmode}{hexmode}{as.character.hexmode} ! Undefined control sequence. l.16814 \aliasA {as.hexmode}{hexmode}{as.hexmode} ! Undefined control sequence. l.16815 \aliasA {format.hexmode}{hexmode}{format.hexmode} ! Undefined control sequence. l.16816 \aliasA {print.hexmode}{hexmode}{print.hexmode} ! Undefined control sequence. l.16817 \aliasA {xor.hexmode}{hexmode}{xor.hexmode} ! Undefined control sequence. l.16818 \aliasA {[.hexmode}{hexmode}{[.hexmode} ! Undefined control sequence. l.16819 \aliasB {"|.hexmode}{hexmode}{|.hexmode} ! Undefined control sequence. l.16820 \keyword {utilities}{hexmode} ! Undefined control sequence. l.16821 \keyword {print}{hexmode} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16823 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16827 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16829 \begin{Usage} Underfull \hbox (badness 3240) in paragraph at lines 16802--16830 []\OT1/cmr/m/n/10 zz <- gz-con(file("ex2.gz", "wb")) cat("TITLE ex-tra line", " 2 3 5 Underfull \hbox (badness 8094) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 file("ex2.gz")) close(zz) un-link("ex2.gz") hex-modeDis-play Num-bers Underfull \hbox (badness 10000) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 in Hex-adec-i-mal-hex-mode "!.hex-mod-e-hex-mode!.hexmode &.hex -mod-e-hex- Underfull \hbox (badness 10000) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 mode.Ramp..hexmode as.character.hexmodehexmodeas.character.hexm ode Underfull \hbox (badness 10000) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 as.hexmodehexmodeas.hexmode for-mat.hexmodehexmodeformat.hexmod e Underfull \hbox (badness 10000) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 print.hexmodehexmodeprint.hexmode xor.hexmodehexmodexor.hexmode Underfull \hbox (badness 4531) in paragraph at lines 16802--16830 \OT1/cmr/m/n/10 [.hex-mod-e-hex-mode[.hexmode "|.hex-mod-e-hex-mode|.hexmode ut il-i-tieshex- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16842 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16844 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16845 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16846 \item[\code{x}] An object, for the methods inheriting from class \co... ! Undefined contro for immediate help. ... l.16847 \item[\code{width}] \code{NULL} or a positive integer specifying the... ! Undefined control sequence. l.16847 \item[\code{width}] \code {NULL} or a positive integer specifying the... [168>] for immediate help. ... l.16849 \item[\code{upper.case}] a logical indicating whether to use upper-case ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16851 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16852 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16853 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16855 \begin{Details} \relax ! Undefined control sequence. l.16856 Class \code {"hexmode"} consists of integer vectors with that class ! Undefined control sequence. l.16859 If \code {width = NULL} (the default), the output is padded with ! Undefined control sequence. l.16863 \code {as.hexmode} can convert integers (of \LinkA{type}{type} \code{... ! Undefined control sequence. l.16863 ...exmode} can convert integers (of \LinkA {type}{type} \code{"intege... ! Undefined control sequence. l.16863 ...t integers (of \LinkA{type}{type} \code {"integer"} or ! Undefined control sequence. l.16864 \code {"double"}) and character vectors whose elements contain only ! Undefined control sequence. l.16865 \code {0-9}, \code{a-f}, \code{A-F} (or are \code{NA}) to class ! Undefined control sequence. l.16865 \code{0-9}, \code {a-f}, \code{A-F} (or are \code{NA}) to class ! Undefined control sequence. l.16865 \code{0-9}, \code{a-f}, \code {A-F} (or are \code{NA}) to class ! Undefined control sequence. l.16865 ...}, \code{a-f}, \code{A-F} (or are \code {NA}) to class ! Undefined control sequence. l.16866 \code {"hexmode"}. ! Undefined control sequence. l.16868 There is a \code {\LinkA{!}{!}} method and \code{\LinkA{|}{|}}, \code... ! Undefined control sequence. l.16868 There is a \code{\LinkA {!}{!}} method and \code{\LinkA{|}{|}}, \code... ! Undefined control sequence. l.16868 ... a \code{\LinkA{!}{!}} method and \code {\LinkA{|}{|}}, \code{\Lin... ! Undefined control sequence. l.16868 ...e{\LinkA{!}{!}} method and \code{\LinkA {|}{|}}, \code{\LinkA{\&}{... ! Undefined control sequence. l.16868 ...} method and \code{\LinkA{|}{|}}, \code {\LinkA{\&}{.Ramp.}} and ! Undefined control sequence. l.16868 ...d and \code{\LinkA{|}{|}}, \code{\LinkA {\&}{.Ramp.}} and ! Undefined control sequence. l.16869 \code {\LinkA{xor}{xor}} methods: these recycle their arguments to the ! Undefin [145ed control sequence. l.16869 \code{\LinkA {xor}{xor}} methods: these recycle their arguments to the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16872 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16874 \begin{SeeAlso} \relax ! Undefined control sequence. l.16875 \code {\LinkA{octmode}{octmode}}, \code{\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.16875 \code{\LinkA {octmode}{octmode}}, \code{\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.16875 \code{\LinkA{octmode}{octmode}}, \code {\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.16875 ...\LinkA{octmode}{octmode}}, \code{\LinkA {sprintf}{sprintf}} for ot... ! Undefined control sequence. l.16876 converting integers to hex, \code {\LinkA{strtoi}{strtoi}} to convert... ! Undefined control sequence. l.16876 converting integers to hex, \code{\LinkA {strtoi}{strtoi}} to convert... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16878 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16880 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16881 \begin{ExampleCode} ! Missing $ inserted. $ l.16885 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16888 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16889 \end{Examples} ! Undefined control sequence. l.16890 \HeaderA {Hyperbolic}{Hyperbolic Functions}{Hyperbolic} ! Undefined control sequence. l.16891 \aliasA {acosh}{Hyperbolic}{acosh} ! Undefined control sequence. l.16892 \aliasA {asinh}{Hyperbolic}{asinh} ! Undefined control sequence. l.16893 \aliasA {atanh}{Hyperbolic}{atanh} ! Undefined control sequence. l.16894 \aliasA {cosh}{Hyperbolic}{cosh} ! Undefined control sequence. l.16895 \aliasA {sinh}{Hyperbolic}{sinh} ! Undefined control sequence. l.16896 \aliasA {tanh}{Hyperbolic}{tanh} ! Undefined control sequence. l.16897 \keyword {math}{Hyperbolic} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... >] for immediate help. ... l.16904 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16906 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16915 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16917 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16918 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16919 \item[\code{x}] a numeric or complex vector ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16920 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16921 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16923 \begin{Details} \relax ! Undefined control sequence. l.16924 These are \LinkA {internal generic}{internal generic} \LinkA{primitiv... ! Undefined control sequence. l.16924 ...ernal generic}{internal generic} \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.16926 \code {\LinkA{Math}{S3groupGeneric}} group generic. ! Undefined control sequence. l.16926 \code{\LinkA {Math}{S3groupGeneric}} group generic. ! Undefined control sequence. l.16929 \code {asin} \emph{et seq}, and agree with those defined in Abramowitz ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16933 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16935 \begin{Section} > for immediate help. ... l.16939 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16941 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16946 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16948 \begin{SeeAlso} \relax ! Undefined control sequence. l.16949 The trigonometric functions, \code {\LinkA{cos}{cos}}, \code{\LinkA{s... ! Undefined control sequence. l.16949 The trigonometric functions, \code{\LinkA {cos}{cos}}, \code{\LinkA{s... ! Undefined control sequence. l.16949 ...nctions, \code{\LinkA{cos}{cos}}, \code {\LinkA{sin}{sin}}, ! Undefined control sequence. l.16949 ..., \code{\LinkA{cos}{cos}}, \code{\LinkA {sin}{sin}}, ! Undefined control sequence. l.16950 \code {\LinkA{tan}{tan}}, and their inverses ! Undefined control sequence. l.16950 \code{\LinkA {tan}{tan}}, and their inverses ! Undefined control sequence. l.16951 \code {\LinkA{acos}{acos}}, \code{\LinkA{asin}{asin}}, \code{\LinkA{a... ! Undefined control sequence. l.16951 \code{\LinkA {acos}{acos}}, \code{\LinkA{asin}{asin}}, \code{\LinkA{a... ! Undefined control sequence. l.16951 \code{\LinkA{acos}{acos}}, \code {\LinkA{asin}{asin}}, \code{\LinkA{a... ! Undefined control sequence. l.16951 \code{\LinkA{acos}{acos}}, \code{\LinkA {asin}{asin}}, \code{\LinkA{a... ! Undefined control sequence. l.16951 ...cos}}, \code{\LinkA{asin}{asin}}, \code {\LinkA{atan}{atan}}. ! Undefined control sequence. l.16951 ...\code{\LinkA{asin}{asin}}, \code{\LinkA {atan}{atan}}. ! Undefined control sequence. l.16953 The logistic distribution function \code {\LinkA{plogis}{plogis}} is ... ! Undefined control sequence. l.16953 ...stic distribution function \code{\LinkA {plogis}{plogis}} is a shi... ! Undefined control sequence. l.16954 version of \code {tanh()} for numeric \code{x}. ! Undefined control sequence. l.16954 version of \code{tanh()} for numeric \code {x}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16955 \end{SeeAlso} ! Undefined control sequence. l.16956 \HeaderA {iconv}{Convert Character Vector between Encodings}{iconv} ! Undefined control sequence. l.16957 \aliasA {iconvlist}{iconv}{iconvlist} ! Undefined control sequence. l.16958 \keyword {character}{iconv} ! Undefined control sequence. l.16959 \keyword {utilities}{iconv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16961 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16964 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16966 \begin{Usage} Overfull \hbox (1.49698pt too wide) in paragraph at lines 16971--16971 []\OT1/cmtt/m/n/10 iconv(x, from = "", to = "", sub = NA, mark = TRUE, toRaw = FALSE)[] [169> for immediate help. ... l.16972 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16974 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16975 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16976 \item[\code{x}] A character vector, or an object to be converted to ... ! Undefined control sequence. l.16977 vector by \code {\LinkA{as.character}{as.character}}, or a list with ... ! Undefined control sequence. l.16977 vector by \code{\LinkA {as.character}{as.character}}, or a list with ... ! Undefined control sequence. l.16977 ...r}{as.character}}, or a list with \code {NULL} and ! Undefined control sequence. l.16978 \code {raw} elements as returned by \code{iconv(toRaw = TRUE)}. ! Undefined control sequence. l.16978 \code{raw} elements as returned by \code {iconv(toRaw = TRUE)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16979 \item[\code{from}] A character string describing the current encoding. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16980 \item[\code{to}] A character string describing the target encoding. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16981 \item[\code{sub}] character string. If not \code{NA} it is used to ... ! Undefined control sequence. l.16981 ...e{sub}] character string. If not \code {NA} it is used to replace ! Undefined control sequence. l.16983 ... character, but can be more.) If \code {"byte"}, the indication is ! Undefined control sequence. l.16984 \code {""} with the hex code of the byte. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16985 \item[\code{mark}] logical, for expert use. Should encodings be mar... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [146 l.16986 \item[\code{toRaw}] logical. Should a list of raw vectors be return... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16988 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16989 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16991 \begin{Details} \relax ! Undefined control sequence. l.16993 platform-dependent. All \R {} platforms support \code{""} (for the ! Undefined control sequence. l.16993 ...dent. All \R{} platforms support \code {""} (for the ! Undefined control sequence. l.16994 encoding of the current locale), \code {"latin1"} and \code{"UTF-8"}. ! Undefined control sequence. l.16994 ...rent locale), \code{"latin1"} and \code {"UTF-8"}. ! Undefined control sequence. l.16997 On most platforms \code {iconvlist} provides an alphabetical list of ! Undefined control sequence. l.16999 page for \code {iconv(5)} or elsewhere in the man pages (but beware ! Undefined control sequence. l.17000 that the system command \code {iconv} may not support the same set of ! Undefined control sequence. l.17001 encodings as the C functions \R {} calls). Unfortunately, the names are ! Undefined control sequence. l.17004 Elements of \code {x} which cannot be converted (perhaps because they ! Undefined control sequence. l.17006 encoding) will be returned as \code {NA} unless \code{sub} is specified. ! Undefined control sequence. l.17006 ...l be returned as \code{NA} unless \code {sub} is specified. ! Undefined control sequence. l.17008 Most versions of \code {iconv} will allow transliteration by appending ! Undefined control sequence. l.17009 \samp {//TRANSLIT} to the \code{to} encoding: see the examples. ! Undefined control sequence. l.17009 \samp{//TRANSLIT} to the \code {to} encoding: see the examples. ! Undefined control sequence. l.17011 Encoding \code {"ASCII"} is accepted, and on most systems \code{"C"} ! Undefined control sequence. l.17011 ... is accepted, and on most systems \code {"C"} ! Undefined control sequence. l.17012 and \code {"POSIX"} are synonyms for ASCII. ! Undefined control sequence. l.17014 Any encoding bits (see \code {\LinkA{Encoding}{Encoding}}) on element... ! Undefined control sequence. l.17014 Any encoding bits (see \code{\LinkA {Encoding}{Encoding}}) on element... ! Undefined control sequence. l.17014 ...oding}{Encoding}}) on elements of \code {x} ! Undefined control sequence. l.17016 \code {from} even if declared otherwise. \code{\LinkA{enc2native}{en... ! Undefined control sequence. l.17016 ...rom} even if declared otherwise. \code {\LinkA{enc2native}> for immediate help. ... l.17023 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17025 \begin{Value} ! Undefined control sequence. l.17026 If \code {toRaw = FALSE} (the default), the value is a character vector ! Undefined control sequence. l.17027 ...length and the same attributes as \code {x} (after ! Undefined control sequence. l.17030 If \code {mark = TRUE} (the default) the elements of the result have a ! Undefined control sequence. l.17031 declared encoding if \code {to} is \code{"latin1"} or \code{"UTF-8"}, ! Undefined control sequence. l.17031 declared encoding if \code{to} is \code {"latin1"} or \code{"UTF-8"}, ! Undefined control sequence. l.17031 ...f \code{to} is \code{"latin1"} or \code {"UTF-8"}, ! Undefined control sequence. l.17032 or if \code {to = ""} and the current locale's encoding is detected as ! Undefined control sequence. l.17035 If \code {toRaw = TRUE}, the value is a list of the same length and ! Undefined control sequence. l.17036 the same attributes as \code {x} whose elements are either \code{NULL} ! Undefined control sequence. l.17036 ...code{x} whose elements are either \code {NULL} ! Undefined control sequence. l.17039 For \code {iconvlist()}, a character vector (typically of a few hundred ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17041 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17043 \begin{Section} {Implementation Details} ! Undefined control sequence. l.17044 ...are three main implementations of \code {iconv} in use. ! Undefined control sequence. l.17045 Linux's C runtime \samp {glibc} contains one. Several platforms ! Undefined control sequence. l.17046 supply GNU \samp {libiconv}, including macOS, FreeBSD and Cygwin, in ! Undefined control sequence. l.17048 Yukihiro Nakadaira's \samp {win\_iconv}, which is based on Windows' ! Undefined control sequence. l.17050 with other systems.) All three have \code {iconvlist}, ignore case in ! Undefined control sequence.] l.17051 encoding names and support \samp {//TRANSLIT} (but with different ! Undefined control sequence. l.17052 results, and for \samp {win\_iconv} currently a `best fit' ! Undefined control sequence. l.17053 strategy is used except for \code {to = "ASCII"}). [170> ! Undefined control sequence. l.17055 ...nixes contain an implemetation of \code {iconv} but ! Undefined control sequence. l.17058 installing GNU \samp {libiconv} on Solaris and AIX, for example. ! Undefined control sequence. l.17061 ...s project (which does not support \samp {//TRANSLIT}) and there is ! Undefined control sequence. l.17062 an older FreeBSD port (\samp {libiconv} is usually used there): it has ! Undefined control sequence. l.17063 ...orted whether or not these work with \R {}. ! Undefined control sequence. l.17066 for \code {to = "ASCII"} where some implementations allow 8-bit ! Undefined control sequence. l.17070 example GNU \samp {libiconv} allows \code{to = "C99"} to use ! Undefined control sequence. l.17070 example GNU \samp{libiconv} allows \code {to = "C99"} to use ! Undefined control sequence. l.17071 \code {\bsl{}uxxx} escapes for non-ASCII characters. ! Undefined control sequence. l.17071 \code{\bsl {}uxxx} escapes for non-ASCII characters. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17072 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17074 \begin{Section} {Byte Order Marks} ! Undefined control sequence. l.17081 \code {U+FEFF} at the beginning of a file in these encodings and ! Undefined control sequence. l.17084 under \code {\LinkA{connection}{connection}}: re-encoded connections ... ! Undefined control sequence. l.17084 under \code{\LinkA {connection}{connection}}: re-encoded connections ... ! Undefined control sequence. l.17086 has not been done so \code {x} starts with a BOM. ! Undefined control sequence. l.17088 ...ill generally interpret a BOM for \code {from} given ! Undefined control sequence. l.17089 as one of \code {"UCS-2"}, \code{"UTF-16"} and ! Undefined control sequence. l.17089 as one of \code{"UCS-2"}, \code {"UTF-16"} and ! Undefined control sequence. l.17090 \code {"UTF-32"}. Implementations differ in how they treat BOMs in ! Undefined control sequence. l.17091 \code {x} in other \code{from} encodings: they may be discarded, ! Undefined control sequence. l.17091 \code{x} in other \code {from} encodings: they may be discarded, ! Undefined control sequence. l.17092 returned as character \code {U+FEFF} or regarded as invalid. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17093 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17095 \begin{Note} \relax ! Undefined control sequence. l.17097 commonly known as `Latin 9', is \code {"latin-9"}: some ! Undefined control sequence. l.17098 platforms support $ l.17105 (\url{https://en.wikipedia.org/wiki/Mac_ OS_Roman}). ! Extra }, or forgotten $. l.17105 ...s://en.wikipedia.org/wiki/Mac_OS_Roman} ). ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17106 \end{Note} ! Missing $ inserted. $ l.17106 \end{Note} ! Missing } inserted. } l.17106 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17108 \begin{SeeAlso} \relax ! Undefined control sequence. l.17109 \code {\LinkA{localeToCharset}{localeToCharset}}, \code{\LinkA{file}{... ! Undefined control sequence. l.17109 \code{\LinkA {localeToCharset}{localeToCharset}}, \code{\LinkA{file}{... ! Undefined control sequence. l.17109 ...caleToCharset}{localeToCharset}}, \code {\LinkA{file}{file}}. ! Undefined control sequence. l.17109 ...harset}{localeToCharset}}, \code{\LinkA {file}{file}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17110 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17112 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17113 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.17114 # # In principle, as not all systems have iconvlist ! You can't use `macro parameter character #' in horizontal mode. l.17114 ## In principle, as not all systems have iconvlist ! You can't use `macro parameter character #' in vertical mode. l.17117 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.17117 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.17118 # # convert from Latin-2 to UTF-8: two of the glibc iconv variants. ! You can't use `macro parameter character #' in horizontal mode. l.17118 ## convert from Latin-2 to UTF-8: two of the glibc iconv variants. ! Missing $ inserted. $ l.17119 iconv(x, "ISO_ 8859-2", "UTF-8") ! Missing $ inserted. $ l.17121 ! You can't use `macro parameter character #' in vertical mode. l.17122 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.17122 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.17124 # # Both x below are in latin1 and will only display correctly in a ! You can't use `macro parameter character #' in vertical mode. l.17124 ## Both x below are in latin1 and will only display correctly in a ! You can't use `macro parameter character #' in horizontal mode. l.17125 # # locale that can represent and display latin1. ! You can't use `macro parameter character #' in horizontal mode. l.17125 ## locale that can represent and display latin1. ! Undefined control sequence. l.17126 x <- "fa\xE 7ile" ! You can't use `macro parameter character #' in horizontal mode. l.17132 iconv(x, "latin1", "ASCII") # NA ! You can't use `macro parameter character #' in horizontal mode. l.17133 iconv(x, "latin1", "ASCII", "?") # "fa?ile" ! You can't use `macro parameter character #' in horizontal mode. l.17134 iconv(x, "latin1", "ASCII", "") # "faile" ! You can't use `macro parameter character #' in horizontal mode. l.17135 iconv(x, "latin1", "ASCII", "byte") # "faile" ! You can't use `macro parameter character #' in vertical mode. l.17137 # # Extracts from old R help files (they are nowadays in UTF-8) ! You can't use `macro parameter character #' in vertical mode. l.17137 ## Extracts from old R help files (they are nowadays in UTF-8) ! Undefined control sequence. l.17138 x <- c("Ekstr\xf 8m", "J\xf6reskog", "bi\xdfchen Z\xfcrcher") ! Undefined control sequence. l.17138 x <- c("Ekstr\xf8m", "J\xf 6reskog", "bi\xdfchen Z\xfcrcher") ! Undefined control sequence. l.17138 ...Ekstr\xf8m", "J\xf6reskog", "bi\xdfchen Z\xfcrcher") ! Undefined control sequence. l.17138 ..., "J\xf6reskog", "bi\xdfchen Z\xfcrcher ") ! You can't use `macro parameter character #' in horizontal mode. l.17141 ...onv(x, "latin1", "ASCII//TRANSLIT")) # platform-dependent ! You can't use `macro parameter character #' in horizontal mode. l.17143 # # and for Windows' 'Unicode' ! You can't use `macro parameter character #' in horizontal mode. l.17143 ## and for Windows' 'Unicode' ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17146 \end [147>{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17147 \end{Examples} ! Undefined control sequence. l.17148 \HeaderA {icuSetCollate}{ Setup Collation by ICU }{icuSetCollate} ! Undefined control sequence. l.17149 \aliasA {icuGetCollate}{icuSetCollate}{icuGetCollate} ! Undefined control sequence. l.17150 \aliasA {R\_ICU\_LOCALE}{icuSetCollate}{R.Rul.ICU.Rul.LOCALE} ! Undefined control sequence. l.17151 \keyword {utilities}{icuSetCollate} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17153 \begin{Description} \relax ! Undefined control sequence. l.17154 ...done by ICU (an optional part of the \R {} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17156 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17158 \begin{Usage} Underfull \hbox (badness 1168) in paragraph at lines 17137--17159 []\OT1/cmr/m/n/10 Extracts from old R help files (they are nowa-days in UTF-8) x <- Underfull \hbox (badness 1789) in paragraph at lines 17137--17159 \OT1/cmr/m/n/10 c("Ekstr8m", "J6reskog", "biZ") En-cod-ing(x) <- "latin1" x try (iconv(x, Underfull \hbox (badness 1888) in paragraph at lines 17137--17159 \OT1/cmr/m/n/10 "latin1", "ASCII//TRANSLIT")) platform-dependent iconv(x, "lat in1", [171 for immediate help. ... l.17164 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17166 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17167 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17168 \item[\code{...}] Named arguments, see `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17169 \item[\code{type}] character string: can be abbreviated. Either the... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17171 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17172 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17174 \begin{Details} \relax ! Undefined control sequence. l.17175 Optionally, \R {} can be built to collate character strings by ICU ! Undefined control sequence. l.17176 (\url {http://site.icu-project.org}). For such systems, ! Undefined control sequence. l.17177 \code {icuSetCollate} can be used to tune the way collation is done. ! Undefined control sequence. \code {locale}: l.17183 \item[\code{locale}:] A character string such as \code{"da\_DK"} ! Undefined control sequence. l.17183 ...ale}:] A character string such as \code {"da\_DK"} ! Undefined control sequence. \code {case\_first}: l.17186 \item[\code{case\_first}:] \code{"upper"}, \code{"lower"} or ! Undefined control sequence. l.17186 \item[\code{case\_first}:] \code {"upper"}, \code{"lower"} or ! Undefined control sequence. l.17186 ...de{case\_first}:] \code{"upper"}, \code {"lower"} or ! Undefined control sequence. l.17187 \code {"default"}, asking for upper- or lower-case characters to be ! Undefined control sequence. \code {alternate\_handling}: l.17190 \item[\code{alternate\_handling}:] Controls the handling of ! Undefined control sequence. l.17192 Possible values are \code > [148 \code {strength}: l.17194 \item[\code{strength}:] Which components should be used? Possible ! Undefined control sequence. l.17195 values \code {"primary"}, \code{"secondary"}, \code{"tertiary"} ! Undefined control sequence. l.17195 values \code{"primary"}, \code {"secondary"}, \code{"tertiary"} ! Undefined control sequence. l.17195 ...e{"primary"}, \code{"secondary"}, \code {"tertiary"} ! Undefined control sequence. l.17196 (default), \code {"quaternary"} and \code{"identical"}. ! Undefined control sequence. l.17196 (default), \code{"quaternary"} and \code {"identical"}. ! Undefined control sequence. \code {french\_collation}: l.17197 \item[\code{french\_collation}:] In a French locale the way accents ! Undefined control sequence. l.17199 ...m left to right. Possible values \code {"on"}, \code{"off"} ! Undefined control sequence. l.17199 ...ht. Possible values \code{"on"}, \code {"off"} ! Undefined control sequence. l.17200 and \code {"default"}. ! Undefined control sequence. \code {normalization}: l.17201 \item[\code{normalization}:] Should strings be normalized? Possible... ! Undefined control sequence. l.17202 are \code {"on"} and \code{"off"} (default). This affects the ! Undefined control sequence. l.17202 are \code{"on"} and \code {"off"} (default). This affects the ! Undefined control sequence. \code {case\_level}: l.17204 \item[\code{case\_level}:] An additional level between secondary and ! Undefined control sequence. l.17206 characters. Possible values \code {"on"} and \code{"off"} (default). ! Undefined control sequence. l.17206 .... Possible values \code{"on"} and \code {"off"} (default). ! Undefined control sequence. \code {hiragana\_quaternary}: l.17207 \item[\code{hiragana\_quaternary}:] Possible values \code{"on"} (sort ! Undefined control sequence. l.17207 ...na\_quaternary}:] Possible values \code {"on"} (sort ! Undefined control sequence. l.17208 ...na first at quaternary level) and \code {"off"}. ! Undefined control sequence. l.17215 Some special values are accepted for \code {locale}: ! Undefined control sequence. \code {"none"}: l.17218 \item[\code{"none"}:] ICU is not used for collation: the OS's [172>]] ! Undefined control sequence. \code {"ASCII"}: l.17220 \item[\code{"ASCII"}:] ICU is not used for collation: the C function ! Undefined control sequence. l.17221 \code {strcmp} is used instead, which should sort byte-by-byte in ! Undefined control sequence. \code {"default"}: l.17223 \item[\code{"default"}:] ! Undefined control sequence. l.17225 session. If environment variable \env {R\_ICU\_LOCALE} is set to a ! Undefined control sequence. \code {""}, \code {"root"}: l.17228 \item[\code{""}, \code{"root"}:] ! Undefined control sequence. \code {""}, \code {"root"}: l.17228 \item[\code{""}, \code{"root"}:] ! Undefined control sequence. l.17230 \url {http://www.unicode.org/reports/tr35/tr35-collation.html#Root_Co... ! You can't use `macro parameter character #' in horizontal mode. l.17230 ...e.org/reports/tr35/tr35-collation.html# Root_Collation}. ! Missing $ inserted. $ l.17230 .../reports/tr35/tr35-collation.html#Root_ Collation}. ! Extra }, or forgotten $. l.17230 ...r35/tr35-collation.html#Root_Collation} . ! Missing $ inserted. $ l.17231 ! Missing } inserted. } l.17231 Overfull \hbox (7.30592pt too wide) in paragraph at lines 17229--17231 []\OT1/cmr/m/n/10 the `root' col-la-tion: see http://www.unicode.org/reports/tr 35/tr35- ! Undefined control sequence. l.17236 \url {http://userguide.icu-project.org/locale}. Note that ICU does not ! Undefined control sequence. l.17239 \code {icuGetCollate("actual")}, often \code{"root"}). Most English ! Undefined control sequence. l.17239 ...e{icuGetCollate("actual")}, often \code {"root"}). Most English ! Undefined control sequence. l.17240 locales fall back to \code {"root"} as although e.g.~\code{"en\_GB"} is ! Undefined control sequence. l.17240 ...to \code{"root"} as although e.g.~\code {"en\_GB"} is ! Undefined control sequence. l.17242 rules for collation. Note that \code {"C"} is not a supported ICU lo... Underfull \hbox (badness 1430) in paragraph at lines 17235--17243 []\OT1/cmr/m/n/10 For the spec-i-fi-ca-tions of `real' ICU lo-cales, see http:/ /userguide.icu- ! Undefined control sequence. l.17244 Some examples are \code {case\_level = "on", strength = "primary"} to... ! Undefined control sequence. l.17245 accent differences and \code {alternate\_handling = "shifted"} to ignore ! Undefined control sequence. l.17249 the \code {C} locale for collation. Once this function is called with ! Undefined control sequence. l.17250 a value for \code {locale}, ICU will be used until it is called again ! Undefined control sequence. l.17251 with \code {locale = "none"}. ! Undefined control sequence. l.17254 \code {locale} is specified: the collation engine is reset if the ! Undefined control sequence. l.17255 ...ion locate category is changed by \code {\LinkA{Sys.setlocale}{Sys... ! Undefined control sequence. l.17255 ...ate category is changed by \code{\LinkA {Sys.setlocale}{Sys.setloc... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17256 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17258 \begin{Value} ! Undefined control sequence. l.17259 For \code {icuGetCollate}, a character string describing the ICU locale ! Undefined control sequence. l.17260 in use (which may be reported as \code {"ICU not in use"}). The ! Undefined control sequence. l.17262 example \code {"da"} rather than \code{"da\_DK"}: English locales are ! Undefined control sequence. l.17262 example \code{"da"} rather than \code {"da\_DK"}: English locales are ! Undefined control sequence. l.17263 likely to report \code {"root"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17264 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17266 \begin{Note} \relax ! Undefined control sequence. l.17271 It is optional on Windows: if \R {} has been built against ICU, it will ! Undefined control sequence. l.17272 only be used if environment variable \env {R\_ICU\_LOCALE} is set or ... ! Undefined control sequence. l.17273 \code {icuSetCollate} is called to select the locale (as ICU and ! Undefined control sequence. l.17275 \code {icuSetCollate(locale = "default")} should work reasonably well ! Undefined control sequence. l.17276 for \R {} >= 3.2.0 and Windows Vista/Server 2008 and later (but finds... ! Undefined control sequence. l.17277 ...ring environment variables such as \env {LC\_COLLATE}). ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17278 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17280 \begin{SeeAlso} \relax ! Undefined control sequence. l.17281 \LinkA {Comparison}{Comparison}, \code{\LinkA{sort}{sort}}. ! Undefined control sequence. l.17281 \LinkA{Comparison}{Comparison}, \code {\LinkA{sort}{sort}}. ! Undefined control sequence. l.17281 ...A{Comparison}{Comparison}, \code{\LinkA {sort}{sort}}. ! Undefined control sequence. l.17283 \code {\LinkA{capabilities}{capabilities}} for whether ICU is available; ! Undefined control sequence. l.17283 \code{\LinkA {capabilities}{capabilities}} for whether ICU is available; ! Undefined control sequence. l.17284 \code {\LinkA{extSoftVersion}{extSoftVersion}} for its version. ! Undefined control sequence. l.17284 \code{\LinkA {extSoftVersion}{extSoftVersion}} for its version. ! Undefined control sequence. l.17287 (\url {http://userguide.icu-project.org/collation}). ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17288 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17290 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17291 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 17286--17292 []\OT1/cmr/m/n/10 The ICU user guide chap-ter on col-la-tion (http://userguide. icu- ! You can't use `macro parameter character #' in vertical mode. l.17293 # # These examples depend on having ICU available, and on the locale. ! You can't use `macro parameter character #' in vertical mode. l.17293 ## These examples depend on having ICU available, and on the locale. ! You can't use `macro parameter character #' in horizontal mode. l.17294 # # As we don't know the current settings, we can only reset to the d... ! You can't use `macro parameter character #' in horizontal mode. l.17294 ## As we don't know the current settings, we can only reset to the d... ! Missing $ inserted. $ l.17300 icuSetCollate(case_ first = "upper"); print(sort(x)) ! Missing $ inserted. $ l.17302 Underfull \hbox (badness 1189) in paragraph at lines 17293--17302 \OT1/cmr/m/n/10 if(capabilities("ICU")) print(icuGetCollate()) print(icuGetCol late("valid")) Underfull \hbox (badness 10000) in paragraph at lines 17293--17302 \OT1/cmr/m/n/10 x <- c("Aarhus", "aarhus", "safe", "test", "Zoo") print(sort(x) ) ! You can't use `macro parameter character #' in vertical mode. l.17303 # # Danish collates upper-case-first and with 'aa' as a single le... ! You can't use `macro parameter character #' in vertical mode. l.17303 ## Danish collates upper-case-first and with 'aa' as a single le... ! Missing $ inserted. $ l.17304 icuSetCollate(locale = "da_ DK", case_first = "default"); print(s... ! You can't use `macro parameter character #' in math mode. l.17305 # # Estonian collates Z between S and T ! You can't use `macro parameter character #' in math mode. l.17305 ## Estonian collates Z between S and T ! Extra }, or forgotten $. l.17308 } ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17309 \end{ExampleCode} ! Missing $ inserted. $ l.17309 \end{ExampleCode} ! Missing } inserted. } l.17309 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17310 \end{Examples} ! Undefined control sequence. l.17311 \HeaderA {identical}{Test Objects for Exact Equality}{identical} ! Undefined control sequence. l.17312 \keyword {programming}{identical} ! Undefined control sequence. l.17313 \keyword Output written on R-intro.pdf (105 pages, 703634 bytes). Transcript written on R-intro.log. {logic}{identical} ! Undefined control sequence. l.17314 \keyword {iteration}{identical} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17316 \begin{Description} \relax ! Undefined control sequence. l.17318 \emph{exactly} equal. It returns \code {TRUE} in this case, ! Undefined control sequence. l.17319 \code {FALSE} in every other case. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17320 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17322 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 17303--17323 []\OT1/cmr/m/n/10 Danish col-lates upper-case-first and with 'aa' as a sin- Underfull \hbox (badness 10000) in paragraph at lines 17303--17323 \OT1/cmr/m/n/10 gle let-ter icuSet-Col-late(locale = "da$[]\OML/cmm/m/it/10 K\O T1/cmr/m/n/10 "\OML/cmm/m/it/10 ; case[]irst \OT1/cmr/m/n/10 = Overfull \hbox (18.96826pt too wide) in paragraph at lines 17303--17323 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 default\OT1/cmr/m/n/10 "); \OML/cmm/m/it/10 p rint\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 sort\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\O T1/cmr/m/n/10 ))\OML/cmm/m/it/10 EstoniancollatesZbetweenSandTicuSetCollate\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 locale \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 17303--17323 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 et[]E\OT1/cmr/m/n/10 "); \OML/cmm/m/it/10 pri nt\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 sort\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1 /cmr/m/n/10 ))\OML/cmm/m/it/10 icuSetCollate\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 l ocale \OT1/cmr/m/n/10 = Underfull \hbox (badness 3281) in paragraph at lines 17303--17323 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 default\OT1/cmr/m/n/10 "); \OML/cmm/m/it/10 p rint\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 icuGetCollate\OT1/cmr/m/n/10 ("\OML/cmm/m /it/10 valid\OT1/cmr/m/n/10 "))$ iden-ti-cal-Test Ob-jects for Ex- Underfull \hbox (badness 1910) in paragraph at lines 17303--17323 \OT1/cmr/m/n/10 act Equal-i-tyi-den-ti-cal pro-gram-mingi-den-ti-cal logi-ci-de n-ti-cal it-er-a-tioniden-ti-cal [173 [149] Overfull \hbox (22.4968pt too wide) in paragraph at lines 17327--17327 []\OT1/cmtt/m/n/10 identical(x, y, num.eq = TRUE, single.NA = TRUE, attrib.as.s et = TRUE,[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17328 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17330 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17331 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17332 \item[\code{x, y}] any \R{} objects. ! Undefined control sequence. l.17332 \item[\code{x, y}] any \R {} objects. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17333 \item[\code{num.eq}] logical indicating if (\code{\LinkA{double}{dou... ! Undefined control sequence. l.17333 ...e{num.eq}] logical indicating if (\code {\LinkA{double}{double}} and ! Undefined control sequence. l.17333 ...q}] logical indicating if (\code{\LinkA {double}{double}} and ! Undefined control sequence. l.17334 \code {\LinkA{complex}{complex}} non-\code{\LinkA{NA}{NA}}) numbers s... ! Undefined control sequence. l.17334 \code{\LinkA {complex}{complex}} non-\code{\LinkA{NA}{NA}}) numbers s... ! Undefined control sequence. l.17334 \code{\LinkA{complex}{complex}} non-\code {\LinkA{NA}{NA}}) numbers s... ! Undefined control sequence. l.17334 ...nkA{complex}{complex}} non-\code{\LinkA {NA}{NA}}) numbers should be ! Undefined control sequence. l.17335 compared using \code {\LinkA{==}{==}} (`equal'), or by bitwise ! Undefined control sequence. l.17335 compared using \code{\LinkA {==}{==}} (`equal'), or by bitwise ! Undefined control sequence. l.17337 \code {-0} and \code{+0}. ! Undefined control sequence. l.17337 \code{-0} and \code {+0}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17338 \item[\code{single.NA}] logical indicating if there is conceptually ... ! Undefined control sequence. l.17339 \code {\LinkA{NA}{NA}} and one \code{\LinkA{NaN}{NaN}}; \code{single... ! Undefined control sequence. l.17339 \code{\LinkA {NA}{NA}} and one \code{\LinkA{NaN}{NaN}}; \code{single... ! Undefined control sequence. l.17339 \code{\LinkA{NA}{NA}} and one \code {\LinkA{NaN}{NaN}}; \code{single... ! Undefined control sequence. l.17339 \code{\LinkA{NA}{NA}} and one \code{\LinkA ] {NaN}{NaN}}; \code{single... ! Undefined control sequence. l.17339 ...and one \code{\LinkA{NaN}{NaN}}; \code {single.NA = FALSE} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17341 \item[\code{attrib.as.set}] logical indicating if \code{\LinkA{attri... ! Undefined control sequence. l.17341 ...ib.as.set}] logical indicating if \code {\LinkA{attributes}{attrib... ! Undefined control sequence. l.17341 ...et}] logical indicating if \code{\LinkA {attributes}{attributes}} of ! Undefined control sequence. l.17342 \code {x} and \code{y} should be treated as \emph{unordered} tagged ! Undefined control sequence. l.17342 \code{x} and \code {y} should be treated as \emph{unordered} tagged ! Undefined control sequence. l.17344 \code {\LinkA{slot}{slot}}s of S4 objects. It may well be too strict... ! Undefined control sequence. l.17344 \code{\LinkA {slot}{slot}}s of S4 objects. It may well be too strict... ! Undefined control sequence. l.17345 \code {attrib.as.set = FALSE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17346 \item[\code{ignore.bytecode}] logical indicating if byte code should be ! Undefined control sequence. l.17347 ignored when comparing \LinkA {closure}{closure}s. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17348 \item[\code{ignore.environment}] logical indicating if their environ... ! Undefined control sequence. l.17349 should be ignored when comparing \LinkA {closure}{closure}s. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17350 \item[\code{ignore.srcref}] logical indicating if their \code{"srcref"} ! Undefined control sequence. l.17350 ...ref}] logical indicating if their \code {"srcref"} ! Undefined control sequence. l.17351 ...should be ignored when comparing \LinkA {closure}{closure}s. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17352 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17353 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17355 \begin{Details} \relax ! Undefined control sequence. l.17356 A call to \code {identical} is the way to test exact equality in ! Undefined control sequence. l.17357 \code {if} and \code{while} statements, as well as in logical ! Undefined control sequence. l.17357 \code{if} and \code {while} statements, as well as in logical ! Undefined control sequence. l.17358 expressions that use \code {\&\&} or \code{||}. In all these ! Undefined control sequence. l.17358 expressions that use \code{\&\&} or \code {||}. In all these ! Undefined control sequence. l.17362 ...the comparison operators, such as \code {==} or ! Undefined control sequence. l.17363 \code {!=}, in these situations. It looks natural, but it is not what ! Undefined control sequence. l.17364 these operators are designed to do in \R {}. They return an object like ! Undefined control sequence. l.17365 the arguments. If you expected \code {x} and \code{y} to be of length ! Undefined control sequence. l.17365 ...ts. If you expected \code{x} and \code {y} to be of length ! Undefined control sequence. l.17367 single \code {FALSE}. Similarly, if one of the arguments is \code{NA}, ! Undefined control sequence. l.17367 ...larly, if one of the arguments is \code {NA}, ! Undefined control sequence. l.17368 the result is also \code {NA}. In either case, the expression ! Undefined control sequence. l.17369 \code {if(x == y)....} won't work as expected. ! Undefined control sequence. l.17371 The function \code {all.equal} is also sometimes used to test equality ! Undefined control sequence. l.17375 The computations in \code {identical} are also reliable and usually ! Undefined control sequence. l.17377 \code {identical} is by having an invalid pointer at the C level, ! Undefined control sequence. l.17384 If \code {single.NA} is true, as by default, \code{identical} sees ! Undefined control sequence. l.17384 ...ingle.NA} is true, as by default, \code {identical} sees ! Undefined control sequence. l.17385 \code {\LinkA{NaN}{NaN}} as different from \code{\LinkA{NA\_real\_}{N... ! Undefined control sequence. l.17385 \code{\LinkA {NaN}{NaN}} as different from \code{\LinkA{NA\_real\_}{N... ! Undefined control sequence. l.17385 ...inkA{NaN}{NaN}} as different from \code {\LinkA{NA\_real\_}{NA.Rul... ! Undefined control sequence. l.17385 ...N}{NaN}} as different from \code{\LinkA {NA\_real\_}{NA.Rul.real.R... ! Undefined control sequence. l.17386 \code {NaN}s are equal (and all \code{NA} of the same type are equal). ! Undefined control sequence. l.17386 \code{NaN}s are equal (and all \code {NA} of the same type are equal). [174] ! Undefined control sequence. l.17391 If \code {attrib.as.set} is true, as by default, comparison of ! Undefined control sequence. l.17395 If \code {ignore.bytecode} is true (the default), the compiled ! Undefined control sequence. l.17396 bytecode of a function (see \code {\LinkA{cmpfun}{cmpfun}}) will be i... ! Undefined control sequence. l.17396 bytecode of a function (see \code{\LinkA {cmpfun}{cmpfun}}) will be i... ! Undefined control sequence. l.17400 should compare the results of \code {\LinkA{disassemble}{disassemble}... ! Undefined control sequence. l.17400 should compare the results of \code{\LinkA {disassemble}{disassemble}... ! Undefined control sequence. l.17402 You almost never want to use \code {identical} on datetimes of class ! Undefined control sequence. l.17403 \code {"POSIXlt"}: not only can different times in the different ! Undefined control sequence. l.17407 Note that \code {identical(x, y, FALSE, FALSE, FALSE, FALSE)} pickily ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17409 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17411 \begin{Value} ! Undefined control sequence. l.17412 A single logical value, \code {TRUE} or \code{FALSE}, never \code{NA} ! Undefined control sequence. l.17412 ...gle logical value, \code{TRUE} or \code {FALSE}, never \code{NA} ! Undefined control sequence. l.17412 ...code{TRUE} or \code{FALSE}, never \code {NA} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17414 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17416 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17418 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17420 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17424 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17426 \begin{SeeAlso} \relax ! Undefined control sequence. l.17427 \code {\LinkA{all.equal}{all.equal}} for descriptions of how two obje... ! Undefined control sequence. l.17427 \code{\LinkA {all.equal}{all.equal}} for descriptions of how two obje... ! Undefined control sequence. l.17428 \LinkA {Comparison}{Comparison} for operators that generate elementwi... ! Undefined control sequence. l.17429 \code {\LinkA{isTRUE}{isTRUE}} is a simple wrapper based on \code{ide... ! Undefined control sequence. l.17429 \code{\LinkA {isTRUE}{isTRUE}} is a simple wrapper based on \code{ide... ! Undefined control sequence. l.17429 ...UE}} is a simple wrapper based on \code {identical}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17430 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17432 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17433 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.17434 identical(1, NULL) # # FALSE -- don't try this with == ! You can't use `macro parameter character #' in horizontal mode. l.17434 identical(1, NULL) ## FALSE -- don't try this with == ! You can't use `macro parameter character #' in horizontal mode. l.17435 identical(1, 1.) # # TRUE in R (both are stored as doubles) ! You can't use `macro parameter character #' in horizontal mode. l.17435 identical(1, 1.) ## TRUE in R (both are stored as doubles) ! You can't use `macro parameter character #' in horizontal mode. l.17436 identical(1, as.integer(1)) # # FALSE, stored as different types ! You can't use `macro parameter character #' in horizontal mode. l.17436 identical(1, as.integer(1)) ## FALSE, stored as different types ! You can't use `macro parameter character #' in horizontal mode. l.17439 # # how to test for object equality allowing for numeric fuzz : ! You can't use `macro parameter character #' in horizontal mode. l.17439 ## how to test for object equality allowing for numeric fuzz : ! You can't use `macro parameter character #' in horizontal mode. l.17441 isTRUE(E) # which is simply defined to just use ! You can't use `macro parameter character #' in horizontal mode. l.17443 # # If all.equal thinks the objects are different, it returns a ! You can't use `macro parameter character #' in horizontal mode. l.17443 ## If all.equal thinks the objects are different, it returns a ! You can't use `macro parameter character #' in horizontal mode. l.17444 # # character string, and the above expression evaluates to FALSE ! You can't use `macro parameter character #' in horizontal mode. l.17444 ## character string, and the above expression evaluates to FALSE ! You can't use `macro parameter character #' in vertical mode. l.17446 # # even for unusual R objects : ! You can't use `macro parameter character #' in vertical mode. l.17446 ## even for unusual R objects : ! You can't use `macro parameter character #' in vertical mode. l.17449 # ## ------- Pickyness Flags : ----------------------------- ! You can't use `macro parameter character #' in vertical mode. l.17449 ## # ------- Pickyness Flags : ----------------------------- ! You can't use `macro parameter character #' in vertical mode. l.17449 ### ------- Pickyness Flags : ----------------------------- ! You can't use `macro parameter character #' in vertical mode. l.17451 # # the infamous example: ! You can't use `macro parameter character #' in vertical mode. l.17451 ## the infamous example: ! You can't use `macro parameter character #' in horizontal mode. l.17452 identical(0., -0.) # TRUE, i.e. not differentiated ! You can't use `macro parameter character #' in horizontal mode. l.17454 # # similar: ! You can't use `macro parameter character #' in horizontal mode. l.17454 ## similar: ! You can't use `macro parameter character #' in horizontal mode. l.17455 identical(NaN, -NaN) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.17456 identical(NaN, -NaN, single.NA = FALSE) # differ on bit-level ! You can't use `macro parameter character #' in vertical mode. l.17458 # ## For functions ("closure"s): ------------------------------------... ! You can't use `macro parameter character #' in vertical mode. l.17458 ## # For functions ("closure"s): ------------------------------------... ! You can't use `macro parameter character #' in vertical mode. l.17458 ### For functions ("closure"s): ------------------------------------... ! You can't use `macro parameter character #' in horizontal mode. l.17459 # ## ~~~~~~~~~ ! You can't use `macro parameter character #' in horizontal mode. l.17459 ## # ~~~~~~~~~ ! You can't use `macro parameter character #' in horizontal mode. l.17459 ### ~~~~~~~~~ ! You can't use `macro parameter character #' in horizontal mode. l.17464 identical(f, g) # TRUE, as bytecode is ignore... ! You can't use `macro parameter character #' in horizontal mode. l.17465 identical(f, g, ignore.bytecode=FALSE) # FALSE: bytecode differs ! You can't use `macro parameter character #' in vertical mode. l.17467 # # GLM families contain several functions, some of which share an en... ! You can't use `macro parameter character #' in vertical mode. l.17467 ## GLM families contain several functions, some of which share an en... ! You can't use `macro parameter character #' in horizontal mode. l.17469 ...ical(p1, p2) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.17470 ...ical(p1, p2, ignore.environment=TRUE) # TRUE ! You can't use `macro parameter character #' in vertical mode. l.17472 # # in interactive use, the 'keep.source' option is typically true: ! You can't use `macro parameter character #' in vertical mode. l.17472 ## in interactive use, the 'keep.source' option is typically true: ! You can't use `macro parameter character #' in horizontal mode. l.17473 op <- options(keep.source = TRUE) # and so, these have differing "sr... ! You can't use `macro parameter character #' in horizontal mode. l.17476 identical(f1,f2)# ignore.srcref= TRUE : TRUE ! You can't use `macro parameter character #' in horizontal mode. l.17477 identical(f1,f2, ignore.srcref=FALSE)# FALSE ! You can't use `macro parameter character #' in horizontal mode. l.17478 options(op) # revert to previous state ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17481 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17482 \end{Examples} ! Undefined control sequence. l.17483 \HeaderA {identity}{Identity Function}{identity} ! Undefined control sequence. l.17484 \keyword {programming}{identity} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17486 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17488 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17490 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17494 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17496 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17497 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17498 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.17498 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17499 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17500 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17502 \begin{SeeAlso} \relax ! Undefined control sequence. l.17503 \code {\LinkA{diag}{diag}} creates diagonal matrices, including ident... ! Undefined control sequence. l.17503 \code{\LinkA {diag}{diag}} creates diagonal matrices, including ident... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17504 \end{SeeAlso} ! Undefined control sequence. l.17505 \HeaderA {ifelse}{Conditional Element Selection}{ifelse} ! Undefined control sequence. l.17506 \keyword {logic}{ifelse} ! Undefined control sequence. l.17507 \keyword {programming}{ifelse} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17509 \begin{Description} \relax ! Undefined control sequence. l.17510 \code {ifelse} returns a value with the same shape as ! Undefined control sequence. l.17511 \code {test} which is filled with elements selected ! Undefined control sequence. l.17512 from either \code {yes} or \code{no} ! Undefined control sequence. l.17512 from either \code{yes} or \code {no} ! Undefined control sequence. l.17513 depending on whether the element of \code {test} ! Undefined control sequence. l.17514 is \code {TRUE} or \code{FALSE}. ! Undefined control sequence. l.17514 is \code{TRUE} or \code {FALSE}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17515 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17517 \begin{Usage} [175 [150]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17521 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17523 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17524 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17525 \item[\code{test}] an object which can be coerced to logical mode. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17526 \item[\code{yes}] return values for true elements of \code{test}. ! Undefined control sequence. l.17526 ...eturn values for true elements of \code {test}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17527 \item[\code{no}] return values for false elements of \code{test}. ! Undefined control sequence. l.17527 ...turn values for false elements of \code {test}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17528 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17529 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17531 \begin{Details} \relax ! Undefined control sequence. l.17532 If \code {yes} or \code{no} are too short, their elements are recycled. ! Undefined control sequence. l.17532 If \code{yes} or \code {no} are too short, their elements are recycled. ! Undefined control sequence. l.17533 \code {yes} will be evaluated if and only if any element of \code{test} ! Undefined control sequence. l.17533 ...ted if and only if any element of \code {test} ! Undefined control sequence. l.17534 is true, and analogously for \code {no}. ! Undefined control sequence. l.17536 Missing values in \code {test} give missing values in the result. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17537 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17539 \begin{Value} ! Undefined control sequence. l.17541 \code {"class"}) as \code{test} and data values from the values of ! Undefined control sequence. l.17541 \code{"class"}) as \code {test} and data values from the values of ! Undefined control sequence. l.17542 \code {yes} or \code{no}. The mode of the answer will be coerced from ! Undefined control sequence. l.17542 \code{yes} or \code {no}. The mode of the answer will be coerced from ! Undefined control sequence. l.17543 ...odate first any values taken from \code {yes} and then ! Undefined control sequence. l.17544 any values taken from \code {no}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17545 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17547 \begin{Section} {Warning} ! Undefined control sequence. l.17548 ...result may depend on the value of \code {test} (see the ! Undefined control sequence. l.17549 ...es), and the class attribute (see \code {\LinkA{oldClass}{oldClass... ! Undefined control sequence. l.17549 ...d the class attribute (see \code{\LinkA {oldClass}{oldClass}}) of the ! Undefined control sequence. l.17550 result is taken from \code {test} and may be inappropriate for the ! Undefined control sequence. l.17551 values selected from \code {yes} and \code{no}. ! Undefined control sequence. l.17551 values selected from \code{yes} and \code {no}. ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17554 \begin{alltt} (tmp <- yes; tmp[!test] <- no[!test]; tmp) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17555 \end{alltt} ! Undefined control sequence. l.17556 ...ended to handle missing values in \code {test}. ! Undefined control sequence. l.17558 Further note that \code {if(test) yes else no} is much more efficient ! Undefined control sequence. l.17559 and often much preferable to \code {ifelse(test, yes, no)} whenever ! Undefined control sequence. l.17560 \code {test} is a simple true/false result, i.e., when ! Undefined control sequence. l.17561 \code {length(test) == 1}. ! Undefined control sequence. l.17563 The \code {srcref} attribute of functions is handled specially: if ! Undefined control sequence. l.17564 \code {test} is a simple true result and \code{yes} evaluates to a fu... ! Undefined control sequence. l.17564 ...test} is a simple true result and \code {yes} evaluates to a function ! Undefined control sequence. l.17565 with \code {srcref} attribute, \code{ifelse} returns \code{yes} inclu... ! Undefined control sequence. l.17565 with \code{srcref} attribute, \code {ifelse} returns \code{yes} inclu... ! Undefined control sequence. l.17565 ... attribute, \code{ifelse} returns \code {yes} including ! Undefined control sequence. l.17566 ...bute (the same applies to a false \code {test} and \code{no} ! Undefined control sequence. l.17566 ...pplies to a false \code{test} and \code {no} ! Undefined control sequence. l.17568 form \code {if(test) yes else no} should be used whenever \code{yes} and ! Undefined control sequence. l.17568 ... else no} should be used whenever \code {yes} and ! Undefined control sequence. l.17569 \code {no} are functions. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17570 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17572 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17576 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17578 \begin{SeeAlso} \relax ! Undefined control sequence. l.17579 \code {\LinkA{if}{if}}. ! Undefined control sequence. l.17579 \code{\LinkA {if}{if}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17580 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17582 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17583 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.17585 sqrt(x) # - gives warning ! You can't use `macro parameter character #' in horizontal mode. l.17586 sqrt(ifelse(x >= 0, x, NA)) # no warning ! You can't use `macro parameter character #' in vertical mode. l.17588 # # Note: the following also gives the warning ! ! You can't use `macro parameter character #' in vertical mode. l.17588 ## Note: the following also gives the warning ! ! You can't use `macro parameter character #' in vertical mode. l.17592 # # ifelse() strips attributes ! You can't use `macro parameter character #' in vertical mode. l.17592 ## ifelse() strips attributes ! You can't use `macro parameter character #' in horizontal mode. l.17593 # # This is important when working with Dates and factors ! You can't use `macro parameter character #' in horizontal mode. l.17593 ## This is important when working with Dates and factors ! You can't use `macro parameter character #' in horizontal mode. l.17595 # # has many "yyyy-mm-29", but a few "yyyy-03-01" in the non-leap years ! You can't use `macro parameter character #' in horizontal mode. l.17595 ## has many "yyyy-mm-29", but a few "yyyy-03-01" in the non-leap years ! You can't use `macro parameter character #' in math mode. l.17597 head(y) # not what you expected ... ==> need restore the class attri... ! You can't use `macro parameter character #' in math mode. l.17600 # # ==> Again a case where it is better *not* to use ifelse(), but ! You can't use `macro parameter character #' in math mode. l.17600 ## ==> Again a case where it is better *not* to use ifelse(), but ! You can't use `macro parameter character #' in math mode. l.17601 # # both more efficient and clear: ! You can't use `macro parameter character #' in math mode. l.17601 ## both more efficient and clear: Underfull \hbox (badness 5490) in paragraph at lines 17592--17605 []\OT1/cmr/m/n/10 ifelse() strips at-tributes This is im-por-tant when work-in g with Underfull \hbox (badness 10000) in paragraph at lines 17592--17605 \OT1/cmr/m/n/10 Dates and fac-tors x <- seq(as.Date("2000-02-29"), as.Date("200 4- Underfull \hbox (badness 4403) in paragraph at lines 17592--17605 \OT1/cmr/m/n/10 10-04"), by = "1 month") has many "yyyy-mm-29", but a few Underfull \hbox (badness 2096) in paragraph at lines 17592--17605 \OT1/cmr/m/n/10 "yyyy-03-01" in the non-leap years y <- ifelse(as.POSIXlt(x)$\O ML/cmm/m/it/10 mday \OT1/cmr/m/n/10 == Underfull \hbox (badness 10000) in paragraph at lines 17592--17605 \OML/cmm/m/it/10 class\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 y\OT1/cmr/m/n/10 ) \OML /cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 class\OT1/cmr/m/n/10 (\OML/ cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 y \OT1/cmr/m/n/10 ==\OML/cmm/m/i t/10 > Againacasewhereitisbetter \OMS/cmsy/m/n/10 ^^C Underfull \hbox (badness 10000) in paragraph at lines 17592--17605 \OML/cmm/m/it/10 not \OMS/cmsy/m/n/10 ^^C \OML/cmm/m/it/10 touseifelse\OT1/cmr/ m/n/10 ()\OML/cmm/m/it/10 ; butbothmoreefficientandclear \OT1/cmr/m/n/10 : \OML /cmm/m/it/10 y\OT1/cmr/m/n/10 2 \OML/cmm/m/it/10 < ! You can't use `macro parameter character #' in vertical mode. l.17607 # # example of different return modes: ! You can't use `macro parameter character #' in vertical mode. l.17607 ## example of different return modes: ! Missing $ inserted. $ l.17609 no <- pi^ (0:3) ! You can't use `macro parameter character #' in math mode. l.17610 typeof(ifelse(NA, yes, no)) # logical ! You can't use `macro parameter character #' in math mode. l.17611 typeof(ifelse(TRUE, yes, no)) # integer ! You can't use `macro parameter character #' in math mode. l.17612 typeof(ifelse(FALSE, yes, no)) # double ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17613 \end{ExampleCode} ! Missing $ inserted. $ l.17613 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17614 \end{Examples} ! Undefined control sequence. l.17615 \HeaderA {integer}{Integer Vectors}{integer} ! Undefined control sequence. l.17616 \aliasA {as.integer}{integer}{as.integer} ! Undefined control sequence. l.17617 \aliasA {is.integer}{integer}{is.integer} ! Undefined control sequence. l.17618 \keyword {classes}{integer} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17620 \begin{Description} \relax ! Undefined control sequence. l.17621 Creates or tests for objects of type \code {"integer"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17622 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17624 \begin{Usage} Underfull \hbox (badness 6859) in paragraph at lines 17607--17625 []\OT1/cmr/m/n/10 example of dif-fer-ent re-turn modes: yes <- 1:3 no <- pi$[]0 : Overfull \hbox (155.30548pt too wide) in paragraph at lines 17607--17625 \OT1/cmr/m/n/10 3)\OML/cmm/m/it/10 typeof\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ifel se\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 NA; yes; no\OT1/cmr/m/n/10 ))\OML/cmm/m/it/ 10 logicaltypeof\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ifelse\OT1/cmr/m/n/10 (\OML/c mm/m/it/10 TRUE; yes; no\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 integertypeof\OT1/cm r/m/n/10 (\OML/cmm/m/it/10 ifelse\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 FALSE; yes; no\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 double$ Underfull \hbox (badness 10000) in paragraph at lines 17607--17625 \OT1/cmr/m/n/10 in-te-gerIn-te-ger Vec-torsin-te-ger as.integerintegeras.intege r ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17630 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17632 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17633 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17634 \item[\code{length}] A non-negative integer specifying the desired l... [176] [151 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17637 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17638 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17639 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17640 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17642 \begin{Details} \relax ! Undefined control sequence. l.17647 Note that current implementations of \R {} use 32-bit integers for ! Undefined control sequence. l.17649 to about \eqn {\pm 2 \times 10^9}{}: \code{\LinkA{double}{double}}s can ! Missing $ inserted. $ l.17649 to about \eqn{\pm 2 \times 10^9}{}: \code{\LinkA{double}{double}}s can ! Extra }, or forgotten $. l.17649 to about \eqn{\pm 2 \times 10^9} {}: \code{\LinkA{double}{double}}s can ! Undefined control sequence. l.17649 to about \eqn{\pm 2 \times 10^9}{}: \code {\LinkA{double}{double}}s can ! Undefined control sequence. l.17649 ...\eqn{\pm 2 \times 10^9}{}: \code{\LinkA {double}{double}}s can ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17651 \end{Details} ! Missing $ inserted. $ l.17651 \end{Details} ! Missing } inserted. } l.17651 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17653 \begin{Value} ! Undefined control sequence. l.17654 \code {integer} creates a integer vector of the specified length. ! Undefined control sequence. l.17655 ...element of the vector is equal to \code {0}. ! Undefined control sequence. l.17657 \code {as.integer} attempts to coerce its argument to be of integer ! Undefined control sequence. l.17658 type. The answer will be \code {NA} unless the coercion succeeds. Real ! Undefined control sequence. l.17660 \code {NA} (unlike S which gives the most extreme integer of the same ! Undefined control sequence. l.17662 \code {as.integer(x)} equals \code{\LinkA{trunc}{trunc}(x)} there), and ! Undefined control sequence. l.17662 \code{as.integer(x)} equals \code {\LinkA{trunc}{trunc}(x)} there), and ! Undefined control sequence. l.17662 \code{as.integer(x)} equals \code{\LinkA {trunc}{trunc}(x)} there), and ! Undefined control sequence. l.17666 \code {0x} or \code{0X}) can be converted, as well as any allowed by ! Undefined control sequence. l.17666 \code{0x} or \code {0X}) can be converted, as well as any allowed by ! Undefined control sequence. l.17667 the platform for real numbers. Like \code {\LinkA{as.vector}{as.vect... ! Undefined control sequence. l.17667 ...rm for real numbers. Like \code{\LinkA {as.vector}{as.vector}} it... ! Undefined control sequence. l.17668 ...names. (To ensure that an object \code {x} is of ! Undefined control sequence. l.17670 \code {\LinkA{storage.mode}{storage.mode}(x) <- "integer"}.) ! Undefined control sequence. l.17670 \code{\LinkA {storage.mode}{storage.mode}(x) <- "integer"}.) ! Undefined control sequence. l.17672 \code {is.integer} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.17672 \code{is.integer} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.17672 ...s.integer} returns \code{TRUE} or \code {FALSE} depending on ! Undefined control sequence. l.17673 whether its argument is of integer \LinkA {type}{type} or not, unless... ! Undefined control sequence. l.17674 factor when it returns \code {FALSE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17675 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17677 \begin{Note} \relax ! Undefined control sequence. l.17678 \code {is.integer(x)} does \bold{not} test if \code{x} contains integer ! Undefined control sequence. l.17678 \code{is.integer(x)} does \bold {not} test if \code{x} contains integer ! Undefined control sequence. l.17678 ...teger(x)} does \bold{not} test if \code {x} contains integer ! Undefined control sequence. l.17679 numbers! For that, use \code {\LinkA{round}{round}}, as in the function ! Undefined control sequence. l.17679 numbers! For that, use \code{\LinkA {round}{round}}, as in the function ! Undefined control sequence. l.17680 \code {is.wholenumber(x)} in the examples. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17681 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17683 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate h]elp. ... l.17687 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17689 \begin{SeeAlso} \relax ! Undefined control sequence. l.17690 \code {\LinkA{numeric}{numeric}}, \code{\LinkA{storage.mode}{storage.... ! Undefined control sequence. l.17690 \code{\LinkA {numeric}{numeric}}, \code{\LinkA{storage.mode}{storage.... ! Undefined control sequence. l.17690 \code{\LinkA{numeric}{numeric}}, \code {\LinkA{storage.mode}{storage.... ! Undefined control sequence. l.17690 ...\LinkA{numeric}{numeric}}, \code{\LinkA {storage.mode}{storage.mod... ! Undefined control sequence. l.17692 \code {\LinkA{round}{round}} (and \code{ceiling} and \code{floor} on ... ! Undefined control sequence. l.17692 \code{\LinkA {round}{round}} (and \code{ceiling} and \code{floor} on ... ! Undefined control sequence. l.17692 \code{\LinkA{round}{round}} (and \code {ceiling} and \code{floor} on ... ! Undefined control sequence. l.17692 ...}{round}} (and \code{ceiling} and \code {floor} on that help ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17694 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17696 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17697 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.17698 # # as.integer() truncates: ! You can't use `macro parameter character #' in horizontal mode. l.17698 ## as.integer() truncates: ! You can't use `macro parameter character #' in horizontal mode. l.17702 is.integer(1) # is FALSE ! ! You can't use `macro parameter character #' in math mode. l.17706 is.wholenumber(1) # is TRUE ! You can't use `macro parameter character #' in math mode. l.17708 is.wholenumber( x ) # --> TRUE FALSE TRUE ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17709 \end{ExampleCode} ! Missing $ inserted. $ l.17709 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17710 \end{Examples} ! Undefined control sequence. l.17711 \HeaderA {interaction}{Compute Factor Interactions}{interaction} ! Undefined control sequence. l.17712 \keyword {category}{interaction} ! LaTeX Error: Environment Description undefined. tar: R-intro.aux: Cannot stat: No such file or directory tar: Exiting with failure status due to previous errors See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17714 \begin{Description} \relax ! Undefined control sequence. l.17715 \code {interaction} computes a factor which represents the interaction ! Undefined control sequence. l.17716 of the given factors. The result of \code {interaction} is always un... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17717 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17719 \begin{Usage} Underfull \hbox (badness 5667) in paragraph at lines 17704--17720 []\OT1/cmr/m/n/10 is.wholenumber <- func-tion(x, tol = .Machine$\OML/cmm/m/it/1 0 double:eps[]:\OT1/cmr/m/n/10 5)\OML/cmm/m/it/10 abs\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 x \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 10000) in paragraph at lines 17704--17720 \OML/cmm/m/it/10 round\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )) \OM L/cmm/m/it/10 < tolis:wholenumber\OT1/cmr/m/n/10 (1)\OML/cmm/m/it/10 isTRUE\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 x < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 seq\OT1/ cmr/m/n/10 (1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 5\OML/cmm/m/it/10 ; by \OT1/cmr /m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17723 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17725 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17726 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17727 \item[\code{...}] the factors for which interaction is to be compute... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17729 \item[\code{drop}] if \code{drop} is \code{TRUE}, unused factor levels ! Undefined control sequence. l.17729 \item[\code{drop}] if \code {drop} is \code{TRUE}, unused factor levels ! Undefined control sequence. l.17729 \item[\code{drop}] if \code{drop} is \code {TRUE}, unused factor levels ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17732 \item[\code{sep}] string to construct the new level labels by joinin... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17734 \item[\code{lex.order}] logical indicating if the order of factor co... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17736 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17737 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17739 \begin{Value} ! Undefined control sequence. l.17742 by \code {sep} which is \code{.} by default. ! Undefined control sequence. l.17742 by \code{sep} which is \code {.} by default. ! Undefined control sequence. l.17744 By default, when \code {lex.order = FALSE}, the levels are ordered so ! Undefined control sequence. l.17747 by \code {lex.order = TRUE}), and differs from ! Undefined control sequence. l.17748 \code {\LinkA{:}{:}}. (It is done this way for compatibility with S.) ! Undefined control sequence. l.17748 \code{\LinkA {:}{:}}. (It is done this way for compatibility with S.) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17749 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17751 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17755 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17757 \begin{SeeAlso} \relax ! Undefined control sequence. l.17758 \code {\LinkA{factor}{factor}}; ! Undefined control sequence. l.17758 \code{\LinkA {factor}{factor}}; ! Undefined control sequence. l.17759 \code {\LinkA{:}{:}} where \code{f:g} is similar to ! Undefined control sequence. l.17759 \code{\LinkA {:}{:}} where \code{f:g} is similar to ! Undefined control sequence. l.17759 \code{\LinkA{:}{:}} where \code {f:g} is similar to ! Undefined control sequence. l.17760 \code {interaction(f, g, sep = ":")} when \code{f} and \code{g} are ... ! Undefined control sequence. l.17760 ...nteraction(f, g, sep = ":")} when \code {f} and \code{g} are fact... ! Undefined control sequence. l.17760 ...g, sep = ":")} when \code{f} and \code {g} are factors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17761 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17763 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17764 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17774 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17775 \end{Examples} ! Undefined control sequence. l.17776 \HeaderA {interactive}{Is R Running Interactively?}{interactive} ! Undefined control sequence. l.17777 \keyword {environment}{interactive} ! Undefined control sequence. l.17778 \keyword {programming}{interactive} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17780 \begin{Description} \relax ! Undefined control sequence. l.17781 Return \code {TRUE} when \R{} is being used interactively and ! Undefined control sequence. l.17781 Return \code{TRUE} when \R {} is being used interactively and ! Undefined control sequence. l.17782 \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17783 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17785 \begin{Usage} [177] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17789 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17791 \begin{Details} \relax ! Undefined control sequence. l.17792 An interactive \R {} session is one in which it is assumed that there is ! Undefined control sequence. l.17793 ...tor to interact with, so for example \R {} can prompt for ! Undefined control sequence. l.17797 GUI consoles will arrange to start \R {} in an interactive session. ... ! Undefined control sequence. l.17798 \R {} is run in a terminal (via \command{Rterm.exe} on Windows), it ! Undefined control sequence. l.17798 \R{} is run in a terminal (via \command {Rterm.exe} on Windows), it ! Undefined control sequence. l.17799 assumes that it is interactive if \file {stdin} is connected to a ! Undefined control sequence. l.17800 (pseudo-)terminal and not if \file {stdin} is redirected to a file or ! Undefined control sequence. l.17801 pipe. Command-line options \option {--interactive} (Unix) and ! Undefined control sequence. l.17802 \option {--ess} (Windows, \command{Rterm.exe}) override the default ! Undefined control sequence. l.17802 \option{--ess} (Windows, \command {Rterm.exe}) override the default ! Undefined control sequence. l.17804 (On a Unix-alike, whether the \code {readline} command-line editor is ! Undefined control sequence. l.17805 used is \strong {not} overridden by \option{--interactive}.) ! Undefined control sequence. l.17805 used is \strong{not} overridden by \option {--interactive}.) ! Undefined control sequence. l.17807 Embedded uses of \R {} can set a session to be interactive or not. ! Undefined control sequence. l.17813 \code {\LinkA{stop}{stop}} and \code{\LinkA{options}{options}("showWa... ! Undefined control sequence. l.17813 \code{\LinkA {stop}{stop}} and \code{\LinkA{options}{options}("showWa... ! Undefined control sequence. l.17813 \code{\LinkA{stop}{stop}} and \code {\LinkA{options}{options}("showWa... ! Undefined control sequence. l.17813 \code{\LinkA{stop}{stop}} and \code{\LinkA {options}{options}("showWa... ! Undefined control sequence. l.17815 \item whether one of \option {--save}, \option{--no-save} or ! Undefined control sequence. l.17815 ...whether one of \option{--save}, \option {--no-save} or ! Undefined control sequence. l.17816 \option {--vanilla} is required, and if \R{} ever asks whether to sav... ! Undefined control sequence. l.17816 \option{--vanilla} is required, and if \R {} ever asks whether to sav... ! Undefined control sequence. l.17820 by \code {\LinkA{dev.new}{dev.new}}: see \code{\LinkA{options}{option... ! Undefined control sequence. l.17820 by \code{\LinkA {dev.new}{dev.new}}: see \code{\LinkA{options}{option... ! Undefined control sequence. l.17820 ...de{\LinkA{dev.new}{dev.new}}: see \code {\LinkA{options}{options}(... ! Undefined control sequence. l.17820 ...kA{dev.new}{dev.new}}: see \code{\LinkA {options}{options}("device")} ! Undefined control sequence. l.17827 In addition, \R {}'s own \R{} code makes use of \code{interactive()}:... ! Undefined control sequence. l.17827 In addition, \R{}'s own \R {} code makes use of \code{interactive()}:... ! Undefined control sequence. l.17827 ...\R{}'s own \R{} code makes use of \code {interactive()}: for ! Undefined control sequence. l.17828 example \code {\LinkA{help}{help}}, \code{\LinkA{debugger}{debugger}}... ! Undefined control sequence. l.17828 example \code{\LinkA {help}{help}}, \code{\LinkA{debugger}{debugger}}... ! Undefined control sequence. l.17828 example \code{\LinkA{help}{help}}, \code {\LinkA{debugger}{debugger}}... ! Undefined control sequence. l.17828 ...\code{\LinkA{help}{help}}, \code{\LinkA {debugger}{debugger}} and ! Undefined control sequence. l.17829 \code {\LinkA{install.packages}{install.packages}} do. ! Undefined control sequence. l.17829 \code{\LinkA {install.packages}{install.packages}} do. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17830 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17832 \begin{Note} \relax ! Undefined control sequence. l.17833 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17834 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17836 \begin{SeeAlso} \relax ! Undefined control sequence. l.17837 \code {\LinkA{source}{source}}, ! Undefined control sequence. l.17837 \code{\LinkA {source}{source}}, ! Undefined control sequence. l.17838 \code {\LinkA{.First}{.First}} ! Undefined control sequence. l.17838 \code{\LinkA {.First}{.First}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17839 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17841 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17842 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17844 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17845 \end{Examples} ! Undefined control sequence. l.17846 \HeaderA {Internal}{Call an Internal Function}{Internal} ! Undefined control sequence. l.17847 \aliasA {.Internal}{Internal}{.Internal} ! Undefined control sequence. l.17848 \keyword {interface}{Internal} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17850 \begin{Description} \relax ! Undefined control sequence. l.17851 \code {.Internal} performs a call to an internal code ! Undefined control sequence. l.17852 which is built in to the \R {} interpreter. ! Undefined control sequence. l.17854 Only true \R {} wizards should even consider using this function, and... ! Undefined control sequence. l.17855 \R {} developers can add to the list of internal functions. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17856 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17858 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17862 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17864 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17865 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17866 \item[\code{call}] a call expression ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17867 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17868 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX C [152ompanion for explanation. Type H for immediate help. ... l.17870 \begin{SeeAlso} \relax ! Undefined control sequence. l.17871 \code {\LinkA{.Primitive}{.Primitive}}, \code{\LinkA{.External}{.Exte... ! Undefined control sequence. l.17871 \code{\LinkA {.Primitive}{.Primitive}}, \code{\LinkA{.External}{.Exte... ! Undefined control sequence. l.17871 ...{\LinkA{.Primitive}{.Primitive}}, \code {\LinkA{.External}{.Extern... ! Undefined control sequence. l.17871 ...{.Primitive}{.Primitive}}, \code{\LinkA {.External}{.External}} (t... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17873 \end{SeeAlso} ! Undefined control sequence. l.17874 \HeaderA {InternalMethods}{Internal Generic Functions}{InternalMethods} ! Undefined control sequence. l.17875 \aliasA {.S3PrimitiveGenerics}{InternalMethods}{.S3PrimitiveGenerics} ! Undefined control sequence. l.17876 \aliasA {internal generic}{InternalMethods}{internal generic} ! Undefined control sequence. l.17877 \aliasA {InternalGenerics}{InternalMethods}{InternalGenerics} ! Undefined control sequence. l.17878 \keyword {methods}{InternalMethods} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17880 \begin{Description} \relax ! Undefined control sequence. l.17881 Many \R {}-internal functions are \emph{generic} and allow ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17883 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17885 \begin{Details} \relax ! Undefined control sequence. l.17887 i.e., you can write \code {\LinkA{methods}{methods}} for them: ! Undefined control sequence. l.17887 i.e., you can write \code{\LinkA {methods}{methods}} for them: ! Undefined control sequence. l.17889 \code {\LinkA{[}{[}}, ! Undefined control sequence. l.17889 \code{\LinkA {[}{[}}, ! Undefined control sequence. l.17890 \code {\LinkA{[[}{[[}}, ! Undefined control sequence. l.17890 \code{\LinkA {[[}{[[}}, ! Undefined control sequence. l.17891 \code {\LinkA{\$}{.Rdol.}}, ! Undefined control sequence. l.17891 \code{\LinkA {\$}{.Rdol.}}, ! Undefined control sequence. l.17892 \code {\LinkA{[<-}{[<.Rdash.}}, ! Undefined control sequence. l.17892 \code{\LinkA {[<-}{[<.Rdash.}}, ! Undefined control sequence. l.17893 \code {\LinkA{[[<-}{[[<.Rdash.}}, ! Undefined control sequence. l.17893 \code{\LinkA {[[<-}{[[<.Rdash.}}, ! Undefined control sequence. l.17894 \code {\LinkA{\$<-}{.Rdol.<.Rdash.}}, ! Undefined control sequence. l.17894 \code{\LinkA {\$<-}{.Rdol.<.Rdash.}}, ! Undefined control sequence. l.17896 \code {\LinkA{length}{length}}, ! Undefined control sequence. l.17896 \code{\LinkA {length}{length}}, ! Undefined control sequence. l.17897 \code {\LinkA{length<-}{length<.Rdash.}}, ! Undefined control sequence. l.17897 \code{\LinkA {length<-}{length<.Rdash.}}, ! Undefined control sequence. l.17898 \code {\LinkA{dimnames}{dimnames}}, ! Undefined control sequence. l.17898 \code{\LinkA {dimnames}{dimnames}}, ! Undefined control sequence. l.17899 \code {\LinkA{dimnames<-}{dimnames<.Rdash.}}, ! Undefined control sequence. l.17899 \code{\LinkA {dimnames<-}{dimnames<.Rdash.}}, ! Undefined control sequence. l.17900 \code {\LinkA{dim}{dim}}, ! Undefined control sequence. l.17900 \code{\LinkA {dim}{dim}}, ! Undefined control sequence. l.17901 \code {\LinkA{dim<-}{dim<.Rdash.}}, ! Undefined control sequence. l.17901 \code{\LinkA {dim<-}{dim<.Rdash.}}, ! Undefined control sequence. l.17902 \code {\LinkA{names}{names}}, ! Undefined control sequence. l.17902 \code{\LinkA {names}{names}}, ! Undefined control sequence. l.17903 \code {\LinkA{names<-}{names<.Rdash.}}, ! Undefined control sequence. l.17903 \code{\LinkA {names<-}{names<.Rdash.}}, ! Undefined control sequence. l.17904 \code {\LinkA{levels<-}{levels<.Rdash.}}, ! Undefined control sequence. l.17904 \code{\LinkA {levels<-}{levels<.Rdash.}}, Underfull \hbox (badness 4954) in paragraph at lines 17896--17905 []\OT1/cmr/m/n/10 lengthlength, length<-length<.Rdash., dim-names-dim-names, di mnames<- Underfull \hbox (badness 10000) in paragraph at lines 17896--17905 \OT1/cmr/m/n/10 dimnames<.Rdash., dimdim, dim<-dim<.Rdash., names-names, names< - [178]] ! Undefined control sequence. l.17906 \code {\LinkA{c}{c}}, ! Undefined control sequence. l.17906 \code{\LinkA {c}{c}}, ! Undefined control sequence. l.17907 \code {\LinkA{unlist}{unlist}}, ! Undefined control sequence. l.17907 \code{\LinkA {unlist}{unlist}}, ! Undefined control sequence. l.17908 \code {\LinkA{cbind}{cbind}}, ! Undefined control sequence. l.17908 \code{\LinkA {cbind}{cbind}}, ! Undefined control sequence. l.17909 \code {\LinkA{rbind}{rbind}}, ! Undefined control sequence. l.17909 \code{\LinkA {rbind}{rbind}}, ! Undefined control sequence. l.17911 \code {\LinkA{as.character}{as.character}}, ! Undefined control sequence. l.17911 \code{\LinkA {as.character}{as.character}}, ! Undefined control sequence. l.17912 \code {\LinkA{as.complex}{as.complex}}, ! Undefined control sequence. l.17912 \code{\LinkA {as.complex}{as.complex}}, ! Undefined control sequence. l.17913 \code {\LinkA{as.double}{as.double}}, ! Undefined control sequence. l.17913 \code{\LinkA {as.double}{as.double}}, ! Undefined control sequence. l.17914 \code {\LinkA{as.integer}{as.integer}}, ! Undefined control sequence. l.17914 \code{\LinkA {as.integer}{as.integer}}, ! Undefined control sequence. l.17915 \code {\LinkA{as.logical}{as.logical}}, ! Undefined control sequence. l.17915 \code{\LinkA {as.logical}{as.logical}}, ! Undefined control sequence. l.17916 \code {\LinkA{as.raw}{as.raw}}, ! Undefined control sequence. l.17916 \code{\LinkA {as.raw}{as.raw}}, ! Undefined control sequence. l.17917 \code {\LinkA{as.vector}{as.vector}}, ! Undefined control sequence. l.17917 \code{\LinkA {as.vector}{as.vector}}, ! Undefined control sequence. l.17918 \code {\LinkA{is.array}{is.array}}, ! Undefined control sequence. l.17918 \code{\LinkA {is.array}{is.array}}, ! Undefined control sequence. l.17919 \code {\LinkA{is.matrix}{is.matrix}}, ! Undefined control sequence. l.17919 \code{\LinkA {is.matrix}{is.matrix}}, ! Undefined control sequence. l.17920 \code {\LinkA{is.na}{is.na}}, ! Undefined control sequence. l.17920 \code{\LinkA {is.na}{is.na}}, ! Undefined control sequence. l.17921 \code {\LinkA{is.nan}{is.nan}}, ! Undefined control sequence. l.17921 \code{\LinkA {is.nan}{is.nan}}, ! Undefined control sequence. l.17922 \code {\LinkA{is.numeric}{is.numeric}}, ! Undefined control sequence. l.17922 \code{\LinkA {is.numeric}{is.numeric}}, ! Undefined control sequence. l.17923 \code {\LinkA{rep}{rep}}, ! Undefined control sequence. l.17923 \code{\LinkA {rep}{rep}}, ! Undefined control sequence. l.17924 \code {\LinkA{seq.int}{seq.int}} ! Undefined control sequence. l.17924 \code{\LinkA {seq.int}{seq.int}} ! Undefined control sequence. l.17925 (which dispatches methods for \code {"seq"}) ! Undefined control sequence. l.17926 and \code {\LinkA{xtfrm}{xtfrm}} ! Undefined control sequence. l.17926 and \code{\LinkA {xtfrm}{xtfrm}} Underfull \hbox (badness 10000) in paragraph at lines 17911--17927 []\OT1/cmr/m/n/10 as.characteras.character, as.complexas.complex, as.doubleas.d ouble, Underfull \hbox (badness 10000) in paragraph at lines 17911--17927 \OT1/cmr/m/n/10 as.integeras.integer, as.logicalas.logical, as.rawas.raw, as.ve ctoras.vector, Underfull \hbox (badness 10000) in paragraph at lines 17911--17927 \OT1/cmr/m/n/10 is.arrayis.array, is.matrixis.matrix, is.nais.na, is.nanis.nan, ! Undefined control sequence. l.17928 In addition, \code {is.name} is a synonym for \code{\LinkA{is.symbol}... ! Undefined control sequence. l.17928 ..., \code{is.name} is a synonym for \code {\LinkA{is.symbol}{is.symb... ! Undefined control sequence. l.17928 ...{is.name} is a synonym for \code{\LinkA {is.symbol}{is.symbol}} and ! Undefined control sequence. l.17929 ...thods for the latter. Similarly, \code {\LinkA{as.numeric}{as.num... ! Undefined control sequence. l.17929 ...or the latter. Similarly, \code{\LinkA {as.numeric}{as.numeric}} ! Undefined control sequence. l.17930 is a synonym for \code {as.double} and dispatches methods for the ! Undefined control sequence. l.17931 latter, i.e., S3 methods are for \code {as.double}, whereas S4 methods ! Undefined control sequence. l.17932 are to be written for \code {as.numeric}. ! Undefined control sequence. l.17934 Note that all of the \LinkA {group generic}{group generic} functions ... ! Undefined control sequence. l.17937 \code {.S3PrimitiveGenerics} is a character vector listing the ! Undefined control sequence. l.17938 ...ich are internal generic and not \LinkA {group generic}{group gene... ! Undefined control sequence. l.17939 Currently \code {\LinkA{as.vector}{as.vector}}, \code{\LinkA{cbind}{c... ! Undefined control sequence. l.17939 Currently \code{\LinkA {as.vector}{as.vector}}, \code{\LinkA{cbind}{c... ! Undefined control sequence. l.17939 ...de{\LinkA{as.vector}{as.vector}}, \code {\LinkA{cbind}{cbind}}, ! Undefined control sequence. l.17939 ...kA{as.vector}{as.vector}}, \code{\LinkA {cbind}{cbind}}, ! Undefined control sequence. l.17940 \code {\LinkA{rbind}{rbind}} and \code{\LinkA{unlist}{unlist}} are th... ! Undefined control sequence. l.17940 \code{\LinkA {rbind}{rbind}} and \code{\LinkA{unlist}{unlist}} are th... ! Undefined control sequence. l.17940 \code{\LinkA{rbind}{rbind}} and \code {\LinkA{unlist}{unlist}} are th... ! Undefined control sequence. l.17940 ...{\LinkA{rbind}{rbind}} and \code{\LinkA {unlist}{unlist}} are the ... ! Undefined control sequence. l.17944 is those for which \code {\LinkA{is.object}{is.object}} returns true. ! Undefined control sequence. l.17944 is those for which \code{\LinkA {is.object}{is.object}} returns true. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17945 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17947 \begin{SeeAlso} \relax ! Undefined control sequence. l.17948 \code {\LinkA{methods}{methods}} for the methods which are available. ! Undefined control sequence. l.17948 \code{\LinkA {methods}{methods}} for the methods which are available. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17949 \end{SeeAlso} ! Undefined contr [153ol sequence. l.17950 \HeaderA {invisible}{Change the Print Mode to Invisible}{invisible} ! Undefined control sequence. l.17951 \keyword {programming}{invisible} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17953 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17955 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17957 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17961 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17963 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17964 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17965 \item[\code{x}] an arbitrary \R{} object. ! Undefined control sequence. l.17965 \item[\code{x}] an arbitrary \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17966 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17967 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17969 \begin{Details} \relax ! Undefined control sequence. l.17974 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17975 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17977 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17981 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17983 \begin{SeeAlso} \relax ! Undefined control sequence. l.17984 \code {\LinkA{withVisible}{withVisible}}, ! Undefined control sequence. l.17984 \code{\LinkA {withVisible}{withVisible}}, ! Undefined control sequence. l.17985 \code {\LinkA{return}{return}}, ! Undefined control sequence. l.17985 \code{\LinkA {return}{return}}, ! Undefined control sequence. l.17986 \code {\LinkA{function}{function}}. ! Undefined control sequence. l.17986 \code{\LinkA {function}{function}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17987 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17989 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17990 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.17991 # These functions both return their argument ! You can't use `macro parameter character #' in horizontal mode. l.17994 f1(1) # prints ! You can't use `macro parameter character #' in horizontal mode. l.17995 f2(1) # does not ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17996 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.17997 \end{Examples} ! Undefined control sequence. l.17998 \HeaderA {is.finite}{Finite, Infinite and NaN Numbers}{is.finite} ! Undefined control sequence. l.17999 \aliasA {finite}{is.finite}{finite} ! Undefined control sequence. l.18000 \aliasA {Inf}{is.finite}{Inf} ! Undefined control sequence. l.18001 \aliasA {infinite}{is.finite}{infinite} ! Undefined control sequence. l.18002 \aliasA {is.infinite}{is.finite}{is.infinite} ! Undefined control sequence. l.18003 \aliasA {is.nan}{is.finite}{is.nan} ! Undefined control sequence. l.18004 \aliasA {NaN}{is.finite}{NaN} ! Undefined control sequence. l.18005 \keyword {programming}{is.finite} ! Undefined control sequence. l.18006 \keyword {math}{is.finite} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18008 \]begin{Description} \relax ! Undefined control sequence. l.18009 \code {is.finite} and \code{is.infinite} return a vector of the same ! Undefined control sequence. l.18009 \code{is.finite} and \code {is.infinite} return a vector of the same ! Undefined control sequence. l.18010 length as \code {x}, indicating which elements are finite (not infinite ! Undefined control sequence. l.18013 \code {Inf} and \code{-Inf} are positive and negative infinity ! Undefined control sequence. l.18013 \code{Inf} and \code {-Inf} are positive and negative infinity ! Undefined control sequence. l.18014 whereas \code {NaN} means `Not a Number'. (These apply to numeric ! Undefined control sequence. l.18016 values of integer vectors.) \code {Inf} and \code{NaN} are ! Undefined control sequence. l.18016 ...integer vectors.) \code{Inf} and \code {NaN} are ! Undefined control sequence. l.18017 \LinkA {reserved}{reserved} words in the \R{} language. ! Undefined control sequence. l.18017 \LinkA{reserved}{reserved} words in the \R {} language. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18018 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18020 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18029 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18031 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18032 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18033 \item[\code{x}] \R{} object to be tested: the default methods handle... ! Undefined control sequence. l.18033 \item[\code{x}] \R {} object to be tested: the default methods handle... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18035 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18036 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18038 \begin{Details} \relax ! Undefined control sequence. l.18039 \code {is.finite} returns a vector of the same length as \code{x} the ! Undefined control sequence. l.18039 ...ns a vector of the same length as \code {x} the ! Undefined control sequence. l.18040 jth element of which is \code {TRUE} if \code{x[j]} is finite (i.e., it ! Undefined control sequence. l.18040 ...lement of which is \code{TRUE} if \code {x[j]} is finite (i.e., it ! Undefined control sequence. l.18041 is not one of the values \code {NA}, \code{NaN}, \code{Inf} or ! Undefined control sequence. l.18041 is not one of the values \code{NA}, \code {NaN}, \code{Inf} or ! Undefined control sequence. l.18041 ...the values \code{NA}, \code{NaN}, \code {Inf} or ! Undefined control sequence. l.18042 \code {-Inf}) and \code{FALSE} otherwise. Complex ! Undefined control sequence. l.18042 \code{-Inf}) and \code {FALSE} otherwise. Complex [179] [154 ! Undefined control sequence. l.18045 \code {is.infinite} returns a vector of the same length as \code{x} the ! Undefined control sequence. l.18045 ...ns a vector of the same length as \code {x} the ! Undefined control sequence. l.18046 jth element of which is \code {TRUE} if \code{x[j]} is infinite (i.e., ! Undefined control sequence. l.18046 ...lement of which is \code{TRUE} if \code {x[j]} is infinite (i.e., ! Undefined control sequence. l.18047 equal to one of \code {Inf} or \code{-Inf}) and \code{FALSE} ! Undefined control sequence. l.18047 equal to one of \code{Inf} or \code {-Inf}) and \code{FALSE} ! Undefined control sequence. l.18047 ...of \code{Inf} or \code{-Inf}) and \code {FALSE} ! Undefined control sequence. l.18048 ...rwise. This will be false unless \code {x} is numeric or complex. ! Undefined control sequence. l.18051 \code {is.nan} tests if a numeric value is \code{NaN}. Do not test ! Undefined control sequence. l.18051 ....nan} tests if a numeric value is \code {NaN}. Do not test ! Undefined control sequence. l.18052 equality to \code {NaN}, or even use \code{\LinkA{identical}{identica... ! Undefined control sequence. l.18052 equality to \code{NaN}, or even use \code {\LinkA{identical}{identica... ! Undefined control sequence. l.18052 ...to \code{NaN}, or even use \code{\LinkA {identical}{identical}}, s... ! Undefined control sequence. l.18054 used for the numeric missing value \code {NA}, and \code{is.nan} is ! Undefined control sequence. l.18054 ...eric missing value \code{NA}, and \code {is.nan} is ! Undefined control sequence. l.18055 ... A complex number is regarded as \code {NaN} if ! Undefined control sequence. l.18056 either the real or imaginary part is \code {NaN} but not \code{NA}. ! Undefined control sequence. l.18056 ...ginary part is \code{NaN} but not \code {NA}. ! Undefined control sequence. l.18060 All three functions accept \code {NULL} as input and return a length ! Undefined control sequence. l.18062 return \code {FALSE} for all entries. Prior to \R{} version 2.14.0 they ! Undefined control sequence. l.18062 ...ode{FALSE} for all entries. Prior to \R {} version 2.14.0 they ! Undefined control sequence. l.18063 accepted all input, returning \code {FALSE} for most non-numeric ! Undefined control sequence. l.18068 specific classes of objects, see \LinkA {InternalMethods}{InternalMet... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18069 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18071 \begin{Value} ! Undefined control sequence. l.18072 ...ical vector of the same length as \code {x}: \code{dim}, ! Undefined control sequence. l.1]8072 ...r of the same length as \code{x}: \code {dim}, ! Undefined control sequence. l.18073 \code {dimnames} and \code{names} attributes are preserved. ! Undefined control sequence. l.18073 \code{dimnames} and \code {names} attributes are preserved. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18074 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18076 \begin{Note} \relax ! Undefined control sequence. l.18077 In \R {}, basically all mathematical functions (including basic ! Undefined control sequence. l.18078 \code {\LinkA{Arithmetic}{Arithmetic}}), are supposed to work properl... ! Undefined control sequence. l.18078 \code{\LinkA {Arithmetic}{Arithmetic}}), are supposed to work properl... ! Undefined control sequence. l.18079 \code {+/- Inf} and \code{NaN} as input or output. ! Undefined control sequence. l.18079 \code{+/- Inf} and \code {NaN} as input or output. ! Undefined control sequence. l.18081 ... be that calls and relations with \code {Inf}s ! Undefined control sequence. l.18084 Computations involving \code {NaN} will return \code{NaN} or perhaps ! Undefined control sequence. l.18084 ... involving \code{NaN} will return \code {NaN} or perhaps ! Undefined control sequence. l.18085 \code {\LinkA{NA}{NA}}: which of those two is not guaranteed and may ... ! Undefined control sequence. l.18085 \code{\LinkA {NA}{NA}}: which of those two is not guaranteed and may ... ! Undefined control sequence. l.18086 on the \R {} platform (since compilers may re-order computations). ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18087 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18089 \begin{References} \relax ! Undefined control sequence. l.18093 \url {https://en.wikipedia.org/wiki/NaN}. ! Undefined control sequence. l.18096 ...ithmetic} ACM Computing Surveys, \bold {23(1)}.\\{} ! Undefined control sequence. l.18098 \url {http://www.validlab.com/goldberg/paper.ps} ! Undefined control sequence. l.18099 Extended PDF version at \url {http://www.validlab.com/goldberg/paper.... ! Undefined control sequence. l.18101 The C99 function \code {isfinite} is used for \code{is.finite}. ! Undefined control sequence. l.18101 ...ction \code{isfinite} is used for \code {is.finite}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18102 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18104 \begin{SeeAlso} \relax ! Undefined control sequence. l.18105 \code {\LinkA{NA}{NA}}, `\emph{Not Available}' which is not a number ! Undefined control sequence. l.18105 \code{\LinkA {NA}{NA}}, `\emph{Not Available}' which is not a number ! Undefined control sequence. l.18109 \code {\LinkA{Arithmetic}{Arithmetic}}, \code{\LinkA{double}{double}}. ! Undefined control sequence. l.18109 \code{\LinkA {Arithmetic}{Arithmetic}}, \code{\LinkA{double}{double}}. ! Undefined control sequence. l.18109 ...{\LinkA{Arithmetic}{Arithmetic}}, \code {\LinkA{double}{double}}. ! Undefined control sequence. l.18109 ...{Arithmetic}{Arithmetic}}, \code{\LinkA {double}{double}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18110 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18112 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18113 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18114 pi / 0 # # = Inf a non-zero number divided by zero creates infinity ! You can't use `macro parameter character #' in horizontal mode. l.18114 pi / 0 ## = Inf a non-zero number divided by zero creates infinity ! You can't use `macro parameter character #' in horizontal mode. l.18115 0 / 0 # # = NaN ! You can't use `macro parameter character #' in horizontal mode. l.18115 0 / 0 ## = NaN ! You can't use `macro parameter character #' in horizontal mode. l.18117 1/0 + 1/0 # Inf ! You can't use `macro parameter character #' in horizontal mode. l.18118 1/0 - 1/0 # NaN ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18127 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18128 \end{Examples} ! Undefined control sequence. l.18129 \HeaderA {is.function}{Is an Object of Type (Primitive) Function?}{is... ! Undefined control sequence. l.18130 \aliasA {is.primitive}{is.function}{is.primitive} ! Undefined control sequence. l.18131 \keyword {programming}{is.function} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18133 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18135 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18137 \begin{Usage} Underfull \hbox (badness 4205) in paragraph at lines 18120--18138 []\OT1/cmr/m/n/10 stopifnot( 1/0 == Inf, 1/Inf == 0 ) sin(Inf) cos(Inf) tan(Inf ) Underfull \hbox (badness 10000) in paragraph at lines 18120--18138 \OT1/cmr/m/n/10 is.functionIs an Ob-ject of Type (Prim-i-tive) Func-tion?is.fun ction Underfull \hbox (badness 10000) in paragraph at lines 18120--18138 \OT1/cmr/m/n/10 is.primitiveis.functionis.primitive pro-gram-mingis.function Ch ecks whether ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18142 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18144 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18145 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18146 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.18146 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18147 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18148 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18150 \begin{Details} \relax ! Undefined control sequence. l.18151 \code {is.primitive(x)} tests if \code{x} is a primitive function ! Undefined control sequence. l.18151 \code{is.primitive(x)} tests if \code {x} is a primitive function ! Undefined control sequence. l.18152 (either a \code {"builtin"} or \code{"special"} as described for ! Undefined control sequence. l.18152 (either a \code{"builtin"} or \code {"special"} as described for ! Undefined control sequence. l.18153 \code {\LinkA{typeof}{typeof}})? It is a \LinkA{primitive}{primitive... ! Undefined control sequence. l.18153 \code{\LinkA {typeof}{typeof}})? It is a \LinkA{primitive}{primitive... ! Undefined control sequence. l.18153 ...inkA{typeof}{typeof}})? It is a \LinkA {primitive}{primitive} fun... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18154 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18156 \begin{Value} ! Undefined control sequence. l.18157 \code {TRUE} if \code{x} is a (primitive) function, and \code{FALSE} ! Undefined control sequence. l.18157 \code{TRUE} if \code {x} is a (primitive) function, and \code{FALSE} ! Undefined control sequence. l.18157 ...x} is a (primitive) function, and \code {FALSE} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18159 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18161 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18162 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18163 is.function(1) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.18164 is.function(is.primitive) # TRUE: it is a function, but .. ! You can't use `macro parameter character #' in horizontal mode. l.18165 is.primitive(is.primitive) # FALSE:it's not a primitive one, whereas ! You can't use `macro parameter character #' in horizontal mode. l.18166 is.primitive(is.function) # TRUE: that one *is* ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18167 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18168 \end{Examples} ! Undefined control sequence. l.18169 \HeaderA {is.language}{Is an Object a Language Object?}{is.language} ! Undefined control sequence. l.18170 \aliasA {language object}{is.language}{language object} ! Undefined control sequence. l.18171 \aliasA {language objects}{is.language}{language objects} ! Undefined control sequence. l.18172 \keyword {programming}{is.language} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18174 \begin{Description} \relax ! Undefined control sequence. l.18175 \code {is.language} returns \code{TRUE} if \code{x} is a ! Undefined control sequence. l.18175 \code{is.language} returns \code {TRUE} if \code{x} is a ! Undefined control sequence. l.18175 ....language} returns \code{TRUE} if \code {x} is a ! Undefined control sequence. l.18176 variable \code {\LinkA{name}{name}}, a \code{\LinkA{call}{call}}, or an ! Undefined control sequence. l.18176 variable \code{\LinkA {name}{name}}, a \code{\LinkA{call}{call}}, or an ! Undefined control sequence. l.18176 ...able \code{\LinkA{name}{name}}, a \code {\LinkA{call}{call}}, or an ! Undefined control sequence. l.18176 ...ode{\LinkA{name}{name}}, a \code{\LinkA {call}{call}}, or an ! Undefined control sequence. l.18177 \code {\LinkA{expression}{expression}}. ! Undefined control sequence. l.18177 \code{\LinkA {expression}{expression}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18178 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18180 \begin{Usage} [180] [155 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18184 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18186 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18187 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18188 \item[\code{x}] object to be tested. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18189 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18190 \end{Arguments} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18192 \begin{Note} \relax ! Undefined control sequence. l.18193 A \code {name} is also known as `symbol', from its type ! Undefined control sequence. l.18194 (\code {\LinkA{typeof}{typeof}}), see \code{\LinkA{is.symbol}{is.symb... ! Undefined control sequence. l.18194 (\code{\LinkA {typeof}{typeof}}), see \code{\LinkA{is.symbol}{is.symb... ! Undefined control sequence. l.18194 (\code{\LinkA{typeof}{typeof}}), see \code {\LinkA{is.symbol}{is.symb... ! Undefined control sequence. l.18194 ...nkA{typeof}{typeof}}), see \code{\LinkA {is.symbol}{is.symbol}}. ! Undefined control sequence. l.18196 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18197 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18199 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18203 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1]8205 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18206 \begin{ExampleCode} ! Missing $ inserted. $ l.18207 ll <- list(a = expression(x^ 2 - 2*x + 1), b = as.name("Jim"), ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18212 \end{ExampleCode} ! Missing $ inserted. $ l.18212 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18213 \end{Examples} ! Undefined control sequence. l.18214 \HeaderA {is.object}{Is an Object `internally classed'?}{is.object} ! Undefined control sequence. l.18215 \keyword {methods}{is.object} ! Undefined control sequence. l.18216 \keyword {classes}{is.object} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18218 \begin{Description} \relax ! Undefined control sequence. l.18219 ...her for internal use. It returns \code {TRUE} if the ! Undefined control sequence. l.18220 object \code {x} has the \R{} internal \code{OBJECT} bit set, and ! Undefined control sequence. l.18220 object \code{x} has the \R {} internal \code{OBJECT} bit set, and ! Undefined control sequence. l.18220 ...ct \code{x} has the \R{} internal \code {OBJECT} bit set, and ! Undefined control sequence. l.18221 \code {FALSE} otherwise. The \code{OBJECT} bit is set when a ! Undefined control sequence. l.18221 \code{FALSE} otherwise. The \code {OBJECT} bit is set when a ! Undefined control sequence. l.18222 \code {"class"} attribute is added and removed when that attribute is ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18225 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18227 \begin{Usage} Underfull \hbox (badness 2351) in paragraph at lines 18196--18228 []\OT1/cmr/m/n/10 This is a prim-i-tiveprim-i-tive func-tion. Becker, R. A., C ham- Underfull \hbox (badness 10000) in paragraph at lines 18196--18228 \OT1/cmr/m/n/10 bers, J. M. and Wilks, A. R. (1988) \OT1/cmr/m/it/10 The New S Lan-guage\OT1/cmr/m/n/10 . Underfull \hbox (badness 1845) in paragraph at lines 18196--18228 \OT1/cmr/m/n/10 Wadsworth & Brooks/Cole. ll <- list(a = expression(x$[] \OMS /cmsy/m/n/10 ^^@ Underfull \hbox (badness 5119) in paragraph at lines 18196--18228 \OT1/cmr/m/n/10 2 \OMS/cmsy/m/n/10 ^^C \OML/cmm/m/it/10 x \OT1/cmr/m/n/10 + 1)\ OML/cmm/m/it/10 ; b \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 as:name\OT1/cmr/m/n/10 ( "\OML/cmm/m/it/10 Jim\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 ; c \OT1/cmr/m/n/10 = \ OML/cmm/m/it/10 as:expression\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 exp\OT1/cmr/m/n/ 10 (1))\OML/cmm/m/it/10 ; d \OT1/cmr/m/n/10 = Overfull \hbox (14.88542pt too wide) in paragraph at lines 18196--18228 \OML/cmm/m/it/10 call\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 sin\OT1/cmr/m/n/10 "\OM L/cmm/m/it/10 ; pi\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OM L/cmm/m/it/10 ll; typeof\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ll; mode\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 stopifnot\OT1/cmr/ m/n/10 (\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ll; is:languag e\OT1/cmr/m/n/10 ))$ Underfull \hbox (badness 1412) in paragraph at lines 18196--18228 \OT1/cmr/m/n/10 is.objectIs an Ob-ject `in-ter-nally classed'?is.object meth-od -sis.object class- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18231 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18233 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18234 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18235 \item[\code{x}] object to be tested. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18236 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18237 \end{Arguments} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18239 \begin{Note} \relax ! Undefined control sequence. l.18240 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18241 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18243 \begin{SeeAlso} \relax ! Undefined control sequence. l.18244 \code {\LinkA{class}{class}}, and \code{\LinkA{methods}{methods}}. ! Undefined control sequence. l.18244 \code{\LinkA {class}{class}}, and \code{\LinkA{methods}{methods}}. ! Undefined control sequence. l.18244 \code{\LinkA{class}{class}}, and \code {\LinkA{methods}{methods}}. ! Undefined control sequence. l.18244 ...\LinkA{class}{class}}, and \code{\LinkA {methods}{methods}}. ! Undefined control sequence. l.18246 \code {\LinkA{isS4}{isS4}}. ! Undefined control sequence. l.18246 \code{\LinkA {isS4}{isS4}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18247 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18249 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18250 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18251 is.object(1) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.18252 is.object(as.factor(1:3)) # TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18253 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18254 \end{Examples} ! Undefined control sequence. l.18255 \HeaderA {is.R}{Are we using R, rather than S?}{is.R} ! Undefined control sequence. l.18256 \keyword {environment}{is.R} ! Undefined control sequence. l.18257 \keyword {utilities}{is.R} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18259 \begin{Description} \relax ! Undefined control sequence. l.18260 Test if running under \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18261 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18263 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18267 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18269 \begin{Details} \relax ! Undefined control sequence. l.18271 of \R {}, S and S-PLUS. ! Undefined control sequence. l.18272 ...rder for code to be runnable in both \R {} and S dialects previous to ! Undefined control sequence. l.18273 ...8.0, your code must either define \code {is.R} or use it as ! Undefined control sequence. l.18275 \code {if (exists("is.R") \&\& is.function(is.R) \&\& is.R()) \{}\\{} ! Undefined control sequence. l.18276 \code { }\emph{\#\# R-specific code}\\{} ! Undefined control sequence. l.18277 \code {\} else \{}\\{} ! Undefined control sequence. l.18278 \code { }\emph{\#\# S-version of code}\\{} ! Undefined control sequence. l.18279 \code {\}} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18280 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18282 \begin{Value} ! Undefined control sequence. l.18283 \code {is.R} returns \code{TRUE} if we are using \R{} and \code{FALSE} ! Undefined control sequence. l.18283 \code{is.R} returns \code {TRUE} if we are using \R{} and \code{FALSE} ! Undefined control sequence. l.18283 ... returns \code{TRUE} if we are using \R {} and \code{FALSE} ! Undefined control sequence. l.18283 ...de{TRUE} if we are using \R{} and \code {FALSE} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18285 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18287 \begin{SeeAlso} \relax ! Undefined control sequence. l.18288 \code {\LinkA{R.version}{R.version}}, \code{\LinkA{system}{system}}. ! Undefined control sequence. l.18288 \code{\LinkA {R.version}{R.version}}, \code{\LinkA{system}{system}}. ! Undefined control sequence. l.18288 \code{\LinkA{R.version}{R.version}}, \code {\LinkA{system}{system}}. ! Undefined control sequence. l.18288 ...kA{R.version}{R.version}}, \code{\LinkA {system}{system}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18289 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18291 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18292 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18294 # # In the early years of R, 'which()' only existed in R: ! You can't use `macro parameter character #' in horizontal mod Warning: unbalanced parentheses in @def...e. l.18294 ## In the early years of R, 'which()' only existed in R: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18296 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18297 \end{Examples} ! Undefined control sequence. l.18298 \HeaderA {is.recursive}{Is an Object Atomic or Recursive?}{is.recursive} ! Undefined control sequence. l.18299 \aliasA {is.atomic}{is.recursive}{is.atomic} ! Undefined control sequence. l.18300 \keyword {programming}{is.recursive} ! Undefined control sequence. l.18301 \keyword {classes}{is.recursive} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18303 \begin{Description} \relax ! Undefined control sequence. l.18304 \code {is.atomic} returns \code{TRUE} if \code{x} is of an atomic type ! Undefined control sequence. l.18304 \code{is.atomic} returns \code {TRUE} if \code{x} is of an atomic type ! Undefined control sequence. l.18304 ...is.atomic} returns \code{TRUE} if \code {x} is of an atomic type ! Undefined control sequence. l.18305 (or \code {NULL}) and \code{FALSE} otherwise. ! Undefined control sequence. l.18305 (or \code{NULL}) and \code {FALSE} otherwise. Underfull \hbox (badness 4132) in paragraph at lines 18275--18306 \OMS/cmsy/m/n/10 g \OT1/cmr/m/n/10 is.R re-turns TRUE if we are us-ing and F ALSE oth-er-wise. ! Undefined control sequence. l.18307 \code {is.recursive} returns \code{TRUE} if \code{x} has a recursive ! Undefined control sequence. l.18307 \code{is.recursive} returns \code {TRUE} if \code{x} has a recursive ! Undefined control sequence. l.18307 ...recursive} returns \code{TRUE} if \code {x} has a recursive ! Undefined control sequence. l.18308 (list-like) structure and \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18309 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18311 \begin{Usage} [181] [156 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18316 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18318 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18319 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18320 \item[\code{x}] object to be tested. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18321 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18322 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18324 \begin{Details} \relax ! Undefined control sequence. l.18325 \code {is.atomic} is true for the \LinkA{atomic}{atomic} types ! Undefined control sequence. l.18325 \code{is.atomic} is true for the \LinkA {atomic}{atomic} types ! Undefined control sequence. l.18326 (\code {"logical"}, \code{"integer"}, \code{"numeric"}, ! Undefined control sequence. l.18326 (\code{"logical"}, \code {"integer"}, \code{"numeric"}, ! Undefined control sequence. l.18326 (\code{"logical"}, \code{"integer"}, \code {"numeric"}, ! Undefined control sequence. l.18327 \code {"complex"}, \code{"character"} and \code{"raw"}) and \code{NULL}. ! Undefined control sequence. l.18327 \code{"complex"}, \code {"character"} and \code{"raw"}) and \code{NULL}. ! Undefined control sequence. l.18327 ...complex"}, \code{"character"} and \code {"raw"}) and \code{NULL}. ! Undefined control sequence. l.18327 ...character"} and \code{"raw"}) and \code {NULL}. ! Undefined control sequence. l.18330 types, \code {NULL}, symbols (as given by \code{\LinkA{as.name}{as.na... ! Undefined control sequence. l.18330 ...\code{NULL}, symbols (as given by \code {\LinkA{as.name}{as.name}}), ! Undefined control sequence. l.18330 ...ULL}, symbols (as given by \code{\LinkA {as.name}{as.name}}), ! Undefined control sequence. l.18331 \code {S4} objects with slots, external pointers, and---rarely visible ! Undefined control sequence. l.18332 from \R {}---weak references and byte code, see \code{\LinkA{typeof}{... ! Undefined control sequence. l.18332 ...eak references and byte code, see \code {\LinkA{typeof}{typeof}}. ! Undefined control sequence. l.18332 ...erences and byte code, see \code{\LinkA {typeof}{typeof}}. ! Undefined control sequence. l.18335 note that \code {\LinkA{is.vector}{is.vector}} imposes further restri... ! Undefined control sequence. l.18335 note that \code{\LinkA {is.vector}{is.vector}} imposes further restri... ! Undefined control sequence. l.18338 These are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18339 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18341 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18345 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18347 \begin{SeeAlso} \relax ! Undefined control sequence. l.18348 \code {\LinkA{is.list}{is.list}}, ! Undefined control sequence. l.18348 \code{\LinkA {is.list}{is.list}}, ! Undefined control sequence. l.18349 \code {\LinkA{is.language}{is.language}}, etc, ! Undefined control sequence. l.18349 \code{\LinkA {is.language}{is.language}}, etc, ! Undefined control sequence. l.18350 and the \code {demo("is.things")}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18351 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18353 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18354 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18359 is.a.r(c(a = 1, b = 3)) # TRUE FALSE ! You can't use `macro parameter character #' in horizontal mode. l.18360 is.a.r(list()) # FALSE TRUE - a list is a list ! You can't use `macro parameter character #' in horizontal mode. l.18361 is.a.r(list(2)) # FALSE TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18362 is.a.r(lm) # FALSE TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18363 is.a.r(y ~ x) # FALSE TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18364 is.a.r(expression(x+1)) # FALSE TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18365 is.a.r(quote(exp)) # FALSE FALSE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18366 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18367 \end{Examples} ! Undefined control sequence. l.18368 \HeaderA {is.single}{Is an Object of Single Precision Type?}{is.single} ! Undefined control sequence. l.18369 \keyword {classes}{is.single} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18371 \begin{Description} \relax ! Undefined control sequence. l.18372 \code {is.single} reports an error. There are no single precision ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18374 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18376 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18380 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18382 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18383 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18384 \item[\code{x}] object to be tested. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18385 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18386 \end{Arguments} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.18388 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18392 \end{References} ! Undefined control sequence. l.18393 \HeaderA {is.unsorted}{Test if an Object is Not Sorted}{is.unsorted} ! Undefined control sequence. l.18394 \keyword {univar}{is.unsorted} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18396 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18399 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18401 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18405 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18407 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18408 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18409 \item[\code{x}] an \R{} object with a class or a numeric, complex, c... ! Undefined control sequence. l.18409 \item[\code{x}] an \R {} object with a class or a numeric, complex, c... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18411 \item[\code{na.rm}] logical. Should missing values be removed befor... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18412 \item[\code{strictly}] logical indicating if the check should be for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18414 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18415 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18417 \begin{Value} ! Undefined control sequence. l.18419 Otherwise, the result will be \code {NA} except for atomic vectors and ! Undefined control sequence. l.18420 objects with an S3 class (where the \code {>=} or \code{>} method is ! Undefined control sequence. l.18420 ... S3 class (where the \code{>=} or \code {>} method is ! Undefined control sequence. l.18421 used to compare \code {x[i]} with \code{x[i-1]} for \code{i} in ! Undefined control sequence. l.18421 used to compare \code{x[i]} with \code {x[i-1]} for \code{i} in ! Undefined control sequence. l.18421 ...code{x[i]} with \code{x[i-1]} for \code {i} in ! Undefined control sequence. l.18422 \code {2:length(x)}) or with an S4 class where you have to provide a ! Undefined control sequence. l.18423 method for \code {\LinkA{is.unsorted}{is.unsorted}()}. ! Undefined control sequence. l.18423 method for \code{\LinkA {is.unsorted}{is.unsorted}()}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18425 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18427 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18431 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18433 \begin{SeeAlso} \relax ! Undefined control sequence. l.18434 \code {\LinkA{sort}{sort}}, \code{\LinkA{order}{order}}. ! Undefined control sequence. l.18434 \code{\LinkA {sort}{sort}}, \code{\LinkA{order}{order}}. ! Undefined control sequence. l.18434 \code{\LinkA{sort}{sort}}, \code {\LinkA{order}{order}}. ! Undefined control sequence. l.18434 \code{\LinkA{sort}{sort}}, \code{\LinkA {order}{order}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18435 \end{SeeAlso} ! Undefined control sequence. l.18436 \HeaderA {ISOdatetime}{Date-time Conversion Functions from Numeric Re... ! Undefined control sequence. l.18437 \aliasA {ISOdate}{ISOdatetime}{ISOdate} ! Undefined control sequence. l.18438 \keyword {utilities}{ISOdatetime} ! Undefined control sequence. l.18439 \keyword {chron}{ISOdatetime} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18441 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18443 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18445 \begin{Usage} Overfull \hbox (1.49698pt too wide) in paragraph at lines 18449--18449 []\OT1/cmtt/m/n/10 ISOdate(year, month, day, hour = 12, min = 0, sec = 0, tz = "GMT")[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18450 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18452 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18453 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18454 \item[\code{year, month, day}] numerical values to specify a day. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18455 \item[\code{hour, min, sec}] numerical values for a time within a day. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18457 \item[\code{tz}] A \LinkA{time zone}{time zone} specification to be ... ! Undefined control sequence. l.18457 \item[\code{tz}] A \LinkA {time zone}{time zone} specification to be ... ! Undefined control sequence. l.18458 \code {""} is the current time zone and \code{"GMT"} is UTC. Invalid ! Undefined control sequence. l.18458 ...{""} is the current time zone and \code {"GMT"} is UTC. Invalid ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18460 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18461 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18463 \begin{Details} \relax ! Undefined control sequence. l.18464 \code {ISOdatetime} and \code{ISOdate} are convenience wrappers for ! Undefined control sequence. l.18464 \code{ISOdatetime} and \code {ISOdate} are convenience wrappers for ! Undefined control sequence. l.18465 \code {strptime} that differ only in their defaults and that ! Undefined control sequence. l.18466 \code {ISOdate} sets UTC as the time zone. For dates without times it ! Undefined control sequence. l.18467 would normally be better to use the \code {"\LinkA{Date}{Date}"} class. ! Undefined control sequence. l.18467 ...ally be better to use the \code{"\LinkA {Date}{Date}"} class. [182 [157]] ! Undefined control sequence. l.18471 Because these make use of \code {\LinkA{strptime}{strptime}}, only ye... ! Undefined control sequence. l.18471 Because these make use of \code{\LinkA {strptime}{strptime}}, only ye... ! Undefined control sequence. l.18472 range \code {0:9999} are accepted. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18473 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18475 \begin{Value} ! Undefined control sequence. l.18476 An object of class \code {"\LinkA{POSIXct}{POSIXct}"}. ! Undefined control sequence. l.18476 An object of class \code{"\LinkA {POSIXct}{POSIXct}"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18477 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18479 \begin{SeeAlso} \relax ! Undefined control sequence. l.18480 \LinkA {DateTimeClasses}{DateTimeClasses} for details of the date-tim... ! Undefined control sequence. l.18481 \code {\LinkA{strptime}{strptime}} for conversions from character str... ! Undefined control sequence. l.18481 \code{\LinkA {strptime}{strptime}} for conversions from character str... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18482 \end{SeeAlso} ! Undefined control sequence. l.18483 \HeaderA {isS4}{ Test for an S4 object }{isS4} ! Undefined control sequence. l.18484 \aliasA {asS3}{isS4}{asS3} ! Undefined control sequence. l.18485 \aliasA {asS4}{isS4}{asS4} ! Undefined control sequence. l.18486 \aliasA {S4}{isS4}{S4} ! Undefined control sequence. l.18487 \keyword {programming}{isS4} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18489 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18491 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18493 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18500 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18502 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18503 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18504 \item[\code{object}] Any R object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18506 \item[\code{flag}] Optional, logical: indicate direction of conversion. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18508 \item[\code{complete}] Optional, logical: whether conversion to S3 is ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18510 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18511 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18513 \begin{Details} \relax ! Undefined control sequence. l.18514 Note that \code {isS4} does not rely on the \pkg{methods} ! Undefined control sequence. l.18514 ...t \code{isS4} does not rely on the \pkg {methods} ! Undefined control sequence. l.18516 \code {\LinkA{require}{require}} that package. ! Undefined control sequence. l.18516 \code{\LinkA {require}{require}} that package. ! Undefined control sequence. l.18518 \code {asS3} uses the value of ! Undefined control sequence. l.18519 \code {complete} to control whether an attempt is made to transform ! Undefined control sequence. l.18520 \code {object} into a valid object of the implied S3 class. If ! Undefined control sequence. l.18521 \code {complete} is \code{TRUE}, ! Undefined control sequence. l.18521 \code{complete} is \code {TRUE}, ! Undefined control sequence. l.18524 \code {\LinkA{S3Part}{S3Part}}). This includes classes extending the ! Undefined control sequence. l.18524 \code{\LinkA {S3Part}{S3Part}}). This includes classes extending the ! Undefined control sequence. l.18525 pseudo-classes \code {array} and \code{matrix}: such objects will have ! Undefined control sequence. l.18525 pseudo-classes \code{array} and \code {matrix}: such objects will have ! Undefined control sequence. l.18526 their class attribute set to \code {NULL}. ! Undefined control sequence. l.18528 \code {isS4} is \LinkA{primitive}{primitive}. ! Undefined control sequence. l.18528 \code{isS4} is \LinkA {primitive}{primitive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18529 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18531 \begin{Value} ! Undefined control sequence. l.18532 \code {isS4} always returns \code{TRUE} or \code{FALSE} according to ! Undefined control sequence. l.18532 \code{isS4} always returns \code {TRUE} or \code{FALSE} according to ! Undefined control sequence. l.18532 ...S4} always returns \code{TRUE} or \code {FALSE} according to ! Undefined control sequence. l.18536 \code {asS4} and \code{asS3} will turn this flag on or off, ! Undefined control sequence. l.18536 \code{asS4} and \code {asS3} will turn this flag on or off, ! Undefined control sequence. l.18537 and \code {asS3} will set the class from the objects \code{.S3Class} ! Undefined control sequence. l.18537 ...ll set the class from the objects \code {.S3Class} ! Undefined control sequence. l.18538 slot if one exists. Note that \code {asS3} will \emph{not} turn ! Undefined control sequence. l.18541 than \code {"S4"} for which the S4 object is an extension, unless ! Undefined control sequence. l.18542 argument \code {complete} is \code{FALSE}. ! Undefined control sequence. l.18542 argument \code{complete} is \code {FALSE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18543 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18545 \begin{SeeAlso} \relax ! Undefined control sequence. l.18546 \code {\LinkA{is.object}{is.object}} for a more general test; \LinkA{... ! Undefined control sequence. l.18546 \code{\LinkA {is.object}{is.object}} for a more general test; \LinkA{... ! Undefined control sequence. l.18546 ...bject}} for a more general test; \LinkA {Introduction}{Introduction} ! Undefined control sequence. l.18547 for general information on S4; \LinkA {Classes\_Details}{Classes.Rul.... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18549 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18551 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18552 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18554 isS4(pi) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.18555 isS4(getClass("MethodDefinition")) # TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18557 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18558 \end{Examples} ! Undefined control sequence. l.18559 \HeaderA {isSymmetric}{Test if a Matrix or other Object is Symmetric ... ! Undefined control sequence. l.18560 \methaliasA {isSymmetric.matrix}{isSymmetric}{isSymmetric.matrix} ! Undefined control sequence. l.18561 \keyword {array}{isSymmetric} ! Undefined control sequence. l.18562 \keyword {utilities}{isSymmetric} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18564 \begin{Description} \relax ! Undefined control sequence. l.18565 Generic function to test if \code {object} is symmetric or not. ! Undefined control sequence. l.18567 \code {\LinkA{complex}{complex}} matrix \code{Z} must be ``Hermitian'... ! Undefined control sequence. l.18567 \code{\LinkA {complex}{complex}} matrix \code{Z} must be ``Hermitian'... ! Undefined control sequence. l.18567 ...{\LinkA{complex}{complex}} matrix \code {Z} must be ``Hermitian'' for ! Undefined control sequence. l.18568 \code {isSymmetric(Z)} to be true. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18569 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18571 \begin{Usage} Underfull \hbox (badness 4266) in paragraph at lines 18559--18572 \OT1/cmr/m/n/10 isSymmetricTest if a Ma-trix or other Ob-ject is Sym-met-ric (H er-mi- [183 [158]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18578 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18580 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18581 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18582 \item[\code{object}] any \R{} object; a \code{\LinkA{matrix}{matrix}... ! Undefined control sequence. l.18582 \item[\code{object}] any \R {} object; a \code{\LinkA{matrix}{matrix}... ! Undefined control sequence. l.18582 ...\code{object}] any \R{} object; a \code {\LinkA{matrix}{matrix}} f... ! Undefined control sequence. l.18582 ...bject}] any \R{} object; a \code{\LinkA {matrix}{matrix}} for the ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18583 \item[\code{tol}] numeric scalar >= 0. Smaller differences are not ! Undefined control sequence. l.18584 considered, see \code {\LinkA{all.equal.numeric}{all.equal.numeric}}. ! Undefined control sequence. l.18584 considered, see \code{\LinkA {all.equal.numeric}{all.equal.numeric}}. Underfull \hbox (badness 4467) in paragraph at lines 18583--18585 []\OT1/cmr/m/n/10 numeric scalar >= 0. Smaller dif-fer-ences are not con-sid-er ed, see ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18585 \item[\code{tol1}] numeric scalar >= 0. \code{isSymmetric.matrix()} ! Undefined control sequence. l.18585 ...code{tol1}] numeric scalar >= 0. \code {isSymmetric.matrix()} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18589 \item[\code{...}] further arguments passed to methods; the matrix me... ! Undefined control sequence. l.18590 passes these to \code {\LinkA{all.equal}{all.equal}}. ! Undefined control sequence. l.18590 passes these to \code{\LinkA {all.equal}{all.equal}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18591 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18592 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18594 \begin{Details} \relax ! Undefined control sequence. l.18595 The \code {\LinkA{matrix}{matrix}} method is used inside \code{\LinkA... ! Undefined control sequence. l.18595 The \code{\LinkA {matrix}{matrix}} method is used inside \code{\LinkA... ! Undefined control sequence. l.18595 ...x}{matrix}} method is used inside \code {\LinkA{eigen}{eigen}} by ! Undefined control sequence. l.18595 ...ix}} method is used inside \code{\LinkA {eigen}{eigen}} by ! Undefined control sequence. l.18597 \code {\LinkA{all.equal}{all.equal}}. It might not be appropriate in... ! Undefined control sequence. l.18597 \code{\LinkA {all.equal}{all.equal}}. It might not be appropriate in... ! Undefined control sequence. l.18600 Note that a matrix \code {m} is only symmetric if its \code{rownames}... ! Undefined control sequence. l.18600 ...\code{m} is only symmetric if its \code {rownames} and ! Undefined control sequence. l.18601 \code {colnames} are identical. Consider using \code{\LinkA{unname}{... ! Undefined control sequence. l.18601 ...s} are identical. Consider using \code {\LinkA{unname}{unname}(m)}. ! Undefined control sequence. l.18601 ...identical. Consider using \code{\LinkA {unname}{unname}(m)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18602 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18604 \begin{Value} ! Undefined control sequence. l.18605 logical indicating if \code {object} is symmetric or not. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18606 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18608 \begin{SeeAlso} \relax ! Undefined control sequence. l.18609 \code {\LinkA{eigen}{eigen}} which calls \code{isSymmetric} when its ! Undefined control sequence. l.18609 \code{\LinkA {eigen}{eigen}} which calls \code{isSymmetric} when its ! Undefined control sequence. l.18609 ...\LinkA{eigen}{eigen}} which calls \code {isSymmetric} when its ! Undefined control sequence. l.18610 \code {symmetric} argument is missing. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18611 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18613 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18614 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18615 isSymmetric(D3 <- diag(3)) # -> TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18619 isSymmetric(D3) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18620 isSymmetric(D3, tol = 0) # FALSE for zero-tolerance ! You can't use `macro parameter character #' in vertical mode. l.18622 # # Complex Matrices - Hermitian or not ! You can't use `macro parameter character #' in vertical mode. l.18622 ## Complex Matrices - Hermitian or not ! You can't use `macro parameter character #' in horizontal mode. l.18625 isSymmetric(Z) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18626 isSymmetric(Z + 1) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.18627 isSymmetric(Z + 1i) # FALSE -- a Hermitian matrix has a *real* diagonal ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18628 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18629 \end{Examples} ! Undefined control sequence. l.18630 \HeaderA {jitter}{`Jitter' (Add Noise) to Numbers}{jitter} ! Undefined control sequence. l.18631 \keyword {dplot}{jitter} ! Undefined control sequence. l.18632 \keyword {utilities}{jitter} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18634 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18636 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18638 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18642 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18644 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18645 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18646 \item[\code{x}] numeric vector to which \emph{jitter} should be added. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18647 \item[\code{factor}] numeric. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18648 \item[\code{amount}] numeric; if positive, used as \emph{amount} (se... ! Undefined control sequence. l.18649 otherwise, if \code {= 0} the default is \code{factor * z/50}. ! Undefined control sequence. l.18649 ...ise, if \code{= 0} the default is \code {factor * z/50}. ! Undefined control sequence. l.18651 Default (\code {NULL}): \code{factor * d/5} where \code{d} is about ! Undefined control sequence. l.18651 Default (\code{NULL}): \code {factor * d/5} where \code{d} is about ! Undefined control sequence. l.18651 ...NULL}): \code{factor * d/5} where \code {d} is about ! Undefined control sequence. l.18652 the smallest difference between \code {x} values. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18653 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18654 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18656 \begin{Details} \relax ! Undefined control sequence. l.18657 The result, say \code {r}, is \code{r <- x + runif(n, -a, a)} ! Undefined control sequence. l.18657 The result, say \code{r}, is \code {r <- x + runif(n, -a, a)} ! Undefined control sequence. l.18658 where \code {n <- length(x)} and \code{a} is the \code{amount} ! Undefined control sequence. l.18658 where \code{n <- length(x)} and \code {a} is the \code{amount} ! Undefined control sequence. l.18658 ...<- length(x)} and \code{a} is the \code {amount} ! Undefined control sequence. l.18661 Let \code {z <- max(x) - min(x)} (assuming the usual case). ! Undefined control sequence. l.18662 The amount \code {a} to be added is eithe Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159r provided as \emph{positive} ! Undefined control sequence. l.18663 argument \code {amount} or otherwise computed from \code{z}, as ! Undefined control sequence. l.18663 ...mount} or otherwise computed from \code {z}, as ! Undefined control sequence. l.18666 If \code {amount == 0}, we set \code{a <- factor * z/50} (same as S). ! Undefined control sequence. l.18666 If \code{amount == 0}, we set \code {a <- factor * z/50} (same as S). ! Undefined control sequence. l.18668 If \code {amount} is \code{NULL} (\emph{default}), we set ! Undefined control sequence. l.18668 If \code{amount} is \code {NULL} (\emph{default}), we set ! Undefined control sequence. l.18669 \code {a <- factor * d/5} where \emph{d} is the smallest ! Undefined control sequence. l.18670 ...adjacent unique (apart from fuzz) \code {x} values. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18671 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18673 \begin{Value} ! Undefined control sequence. l.18674 \code {jitter(x, ...)} returns a numeric of the same length as ! Undefined control sequence. l.18675 \code {x}, but with an \code{amount} of noise added in order to break ! Undefined control sequence. l.18675 \code{x}, but with an \code {amount} of noise added in order to break ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18677 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18679 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18681 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18683 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18691 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18693 \begin{SeeAlso} \relax ! Undefined control sequence. l.18694 \code {\LinkA{rug}{rug}} which you may want to combine with \code{jit... ! Undefined control sequence. l.18694 \code{\LinkA {rug}{rug}} which you may want to combine with \code{jit... ! Undefined control sequence. l.18694 ...hich you may want to combine with \code {jitter}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18695 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18697 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18698 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18700 # # These two 'fail' with S-plus 3.x: ! You can't use `macro parameter character #' in horizontal mode. l.18700 ## These two 'fail' with S-plus 3.x: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18703 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18704 \end{Examples} ! Undefined control sequence. l.18705 \HeaderA {kappa}{Compute or Estimate the Condition Number of a Matrix... ! Undefined control sequence. l.18706 \aliasA {.kappa\_tri}{kappa}{.kappa.Rul.tri} ! Undefined control sequence. l.18707 \methaliasA {kappa.default}{kappa}{kappa.default} ! Undefined control sequence. l.18708 \methaliasA {kappa.lm}{kappa}{kappa.lm} ! Undefined control sequence. l.18709 \methaliasA {kappa.qr}{kappa}{kappa.qr} ! Undefined control sequence. l.18710 \aliasA {rcond}{kappa}{rcond} ! Undefined control sequence. l.18711 \keyword {math}{kappa} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18713 \begin{Description} \relax Underfull \hbox (badness 1275) in paragraph at lines 18688--18717 []\OT1/cmr/m/n/10 Chambers, J. M. and Hastie, T. J. (1992) \OT1/cmr/m/it/10 Sta -tis-ti-cal Mod-els in S. Underfull \hbox (badness 1342) in paragraph at lines 18688--18717 \OT1/cmr/m/n/10 Wadsworth & Brooks/Cole. ru-grug which you may want to com- Underfull \hbox (badness 4096) in paragraph at lines 18688--18717 \OT1/cmr/m/n/10 bine with jit-ter. round(jitter(c(rep(1, 3), rep(1.2, 4), Underfull \hbox (badness 1057) in paragraph at lines 18688--18717 \OT1/cmr/m/n/10 rep(3, 3))), 3) These two 'fail' with S-plus 3.x: jit-ter(rep( 0, 7)) jit- [184]] ! Undefined control sequence. l.18718 \code {kappa()} computes by default (an estimate of) the 2-norm ! Undefined control sequence. l.18719 ...ition number of a matrix or of the \eqn {R}{} matrix of a \eqn{QR}{} ! Undefined control sequence. l.18719 ...ix or of the \eqn{R}{} matrix of a \eqn {QR}{} ! Undefined control sequence. l.18724 \code {rcond()} computes an approximation of the \bold{r}eciprocal ! Undefined control sequence. l.18724 ... computes an approximation of the \bold {r}eciprocal ! Undefined control sequence. l.18725 \bold {cond}ition number, see the details. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18726 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18728 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18743 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18745 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18746 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18747 \item[\code{z, x}] A matrix or a the result of \code{\LinkA{qr}{qr}}... ! Undefined control sequence. l.18747 ..., x}] A matrix or a the result of \code {\LinkA{qr}{qr}} or a fit ... ! Undefined control sequence. l.18747 ... matrix or a the result of \code{\LinkA {qr}{qr}} or a fit from ! Undefined control sequence. l.18748 a class inheriting from \code {"lm"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18749 \item[\code{exact}] logical. Should the result be exact? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18750 \item[\code{norm}] character string, specifying the matrix norm with... ! Undefined control sequence. l.18752 \code {\LinkA{norm}{norm}}. For \code{rcond}, the default is \code{"... ! Undefined control sequence. l.18752 \code{\LinkA {norm}{norm}}. For \code{rcond}, the default is \code{"... ! Undefined control sequence. l.18752 \ [160code{\LinkA{norm}{norm}}. For \code {rcond}, the default is \code{"... ! Undefined control sequence. l.18752 ... For \code{rcond}, the default is \code {"O"}, ! Undefined control sequence. l.18753 meaning the \bold {O}ne- or 1-norm. The (currently only) other ! Undefined control sequence. l.18754 possible value is \code {"I"} for the infinity norm. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18755 \item[\code{method}] a partially matched character string specifying... ! Undefined control sequence. l.18756 \code {"qr"} is the default for back-compatibility, mainly. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18757 \item[\code{triangular}] logical. If true, the matrix used is just ... ! Undefined control sequence. l.18758 triangular part of \code {z}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18759 \item[\code{LINPACK}] logical. If true and \code{z} is not complex,... ! Undefined control sequence. l.18759 ...e{LINPACK}] logical. If true and \code {z} is not complex, the ! Undefined control sequence. l.18760 LINPACK routine \code {dtrco()} is called; otherwise the relevant ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18762 \item[\code{...}] further arguments passed to or from other methods; ! Undefined control sequence. l.18763 for \code {kappa.*()}, notably \code{LINPACK} when \code{norm} is not ! Undefined control sequence. l.18763 for \code{kappa.*()}, notably \code {LINPACK} when \code{norm} is not ! Undefined control sequence. l.18763 ...*()}, notably \code{LINPACK} when \code {norm} is not ! Undefined control sequence. l.18764 \code {"2"}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18765 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18766 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18768 \begin{Details} \relax ! Undefined control sequence. l.18769 For \code {kappa()}, if \code{exact = FALSE} (the default) the 2-norm ! Undefined control sequence. l.18769 For \code{kappa()}, if \code {exact = FALSE} (the default) the 2-norm ! Undefined control sequence. l.18771 exact calculation (via \code {\LinkA{svd}{svd}}) is also likely to be... ! Undefined control sequence. l.18771 exact calculation (via \code{\LinkA {svd}{svd}}) is also likely to be... ! Undefined control sequence. l.18775 calculate, and \code {rcond()} computes these \emph{\bold{r}eciprocal} ! Undefined control sequence. \bold l.18775 ...computes these \emph{\bold{r}eciprocal} ! Undefined control sequence. l.18779 \code {kappa} and \code{rcond} are different interfaces to ! Undefined control sequence. l.18779 \code{kappa} and \code {rcond} are different interfaces to ! Undefined control sequence. l.18782 \code {.kappa\_tri} is an internal function called by \code{kappa.qr}... ! Undefined control sequence. l.18782 ...is an internal function called by \code {kappa.qr} and ! Undefined control sequence. l.18783 \code {kappa.default}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18788 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18790 \begin{Value} ! Undefined control sequence. l.18791 The condition number, \eqn {kappa}{}, or an approximation if ! Undefined control sequence. l.18792 \code {exact = FALSE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18793 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18795 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18798 \end{Author} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18800 \begin{Source} \relax ! Undefined control sequence. l.18801 The LAPACK routines \code {DTRCON} and \code{ZTRCON} and the LINPACK ! Undefined control sequence. l.18801 ...LAPACK routines \code{DTRCON} and \code {ZTRCON} and the LINPACK ! Undefined control sequence. l.18802 routine \code {DTRCO}. [185] Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 [161]] ! Undefined control sequence. l.18804 LAPACK and LINPACK are from \url {http://www.netlib.org/lapack} and ! Undefined control sequence. l.18805 \url {http://www.netlib.org/linpack} and their guides are listed ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18807 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18809 \begin{References} \relax ! Undefined control sequence. l.18813 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.18813 ...ttp://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.18813 ....netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.18814 Underfull \hbox (badness 1817) in paragraph at lines 18804--18814 []\OT1/cmr/m/n/10 LAPACK and LIN-PACK are from http://www.netlib.org/lapack and ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18822 \end{References} ! Missing } inserted. } l.18822 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18824 \begin{SeeAlso} \relax ! Undefined control sequence. l.18825 \code {\LinkA{norm}{norm}}; ! Undefined control sequence. l.18825 \code{\LinkA {norm}{norm}}; ! Undefined control sequence. l.18826 \code {\LinkA{svd}{svd}} for the singular value decomposition and ! Undefined control sequence. l.18826 \code{\LinkA {svd}{svd}} for the singular value decomposition and ! Undefined control sequence. l.18827 \code {\LinkA{qr}{qr}} for the \eqn{QR}{} one. ! Undefined control sequence. l.18827 \code{\LinkA {qr}{qr}} for the \eqn{QR}{} one. ! Undefined control sequence. l.18827 \code{\LinkA{qr}{qr}} for the \eqn {QR}{} one. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18828 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18830 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18831 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18832 kappa(x1 <- cbind(1, 1:10)) # 15.71 ! You can't use `macro parameter character #' in horizontal mode. l.18833 kappa(x1, exact = TRUE) # 13.68 ! You can't use `macro parameter character #' in horizontal mode. l.18834 kappa(x2 <- cbind(x1, 2:11)) # high! [x2 is singular!] ! You can't use `macro parameter character #' in math mode. l.18838 kappa(h9) # pretty high! ! You can't use `macro parameter character #' in math mode. l.18840 kappa(h9, exact = TRUE) / kappa(h9) # 0.677 (i.e., rel.error = 32%) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18841 \end{ExampleCode} ! Missing $ inserted. $ l.18841 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18842 \end{Examples} ! Undefined control sequence. l.18843 \HeaderA {kronecker}{Kronecker Products on Arrays}{kronecker} ! Undefined control sequence. l.18844 \aliasA {\%x\%}{kronecker}{.Rpcent.x.Rpcent.} ! Undefined control sequence. l.18845 \aliasA {.kronecker}{kronecker}{.kronecker} ! Undefined control sequence. l.18846 \keyword {array}{kronecker} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18848 \begin{Description} \relax ! Undefined control sequence. l.18850 \code {X} and \code{Y}. ! Undefined control sequence. l.18850 \code{X} and \code {Y}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18851 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18853 \begin{Usage} Underfull \hbox (badness 2547) in paragraph at lines 18836--18854 []\OT1/cmr/m/n/10 hilbert <- func-tion(n) i <- 1:n; 1 / outer(i - 1, i, "+") sv9 Underfull \hbox (badness 10000) in paragraph at lines 18836--18854 \OT1/cmr/m/n/10 <- svd(h9 <- hilbert(9))$\OML/cmm/m/it/10 dkappa\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 h\OT1/cmr/m/n/10 9)\OML/cmm/m/it/10 prettyhigh\OT1/cmr/m/n/1 0 !\OML/cmm/m/it/10 kappa\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 h\OT1/cmr/m/n/10 9\O ML/cmm/m/it/10 ; exact \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 18836--18854 \OML/cmm/m/it/10 TRUE\OT1/cmr/m/n/10 ) == \OML/cmm/m/it/10 max\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 sv\OT1/cmr/m/n/10 9)\OML/cmm/m/it/10 =min\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 sv\OT1/cmr/m/n/10 9)\OML/cmm/m/it/10 kappa\OT1/cmr/m/n/10 (\OML/cm m/m/it/10 h\OT1/cmr/m/n/10 9\OML/cmm/m/it/10 ; exact \OT1/cmr/m/n/10 = Underfull \hbox (badness 2894) in paragraph at lines 18836--18854 \OML/cmm/m/it/10 TRUE\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 =kappa\OT1/cmr/m/n/10 (\ OML/cmm/m/it/10 h\OT1/cmr/m/n/10 9)0\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 677(\OML/ cmm/m/it/10 i:e:; rel:error \OT1/cmr/m/n/10 = 32$ kro-neck-erKro-necker Prod- Underfull \hbox (badness 1874) in paragraph at lines 18836--18854 \OT1/cmr/m/n/10 ucts on Ar-rayskro-necker %x%kronecker.Rpcent.x.Rpcent. .kro-ne ck-erkro- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18858 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18860 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18861 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18862 \item[\code{X}] A vector or array. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18863 \item[\code{Y}] A vector or array. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18864 \item[\code{FUN}] a function; it may be a quoted string. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18865 \item[\code{make.dimnames}] Provide dimnames that are the product of... ! Undefined control sequence. l.18866 dimnames of \code {X} and \code{Y}. ! Undefined control sequence. l.18866 dimnames of \code{X} and \code {Y}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18867 \item[\code{...}] optional arguments to be passed to \code{FUN}. ! Undefined control sequence. l.18867 ...ptional arguments to be passed to \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18868 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18869 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18871 \begin{Details} \relax ! Undefined control sequence. l.18872 If \code {X} and \code{Y} do not have the same number of ! Undefined control sequence. l.18872 If \code{X} and \code {Y} do not have [162the same number of ! Undefined control sequence. l.18875 taking \code {X} one term at a time and expanding that term as ! Undefined control sequence. l.18876 \code {FUN(x, Y, ...)}. ! Undefined control sequence. l.18878 \code {\%x\%} is an alias for \code{kronecker} (where ! Undefined control sequence. l.18878 \code{\%x\%} is an alias for \code {kronecker} (where ! Undefined control sequence. l.18879 \code {FUN} is hardwired to \code{"*"}). ! Undefined control sequence. l.18879 \code{FUN} is hardwired to \code {"*"}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18880 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18882 \begin{Value} ! Undefined control sequence. l.18883 An array \code {A} with dimensions \code{dim(X) * dim(Y)}. ! Undefined control sequence. l.18883 An array \code{A} with dimensions \code {dim(X) * dim(Y)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18884 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18886 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18888 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18890 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18893 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18895 \begin{SeeAlso} \relax ! Undefined control sequence. l.18896 \code {\LinkA{outer}{outer}}, on which \code{kronecker} is built ! Undefined control sequence. l.18896 \code{\LinkA {outer}{outer}}, on which \code{kronecker} is built ! Undefined control sequence. l.18896 ...e{\LinkA{outer}{outer}}, on which \code {kronecker} is built ! Undefined control sequence. l.18897 and \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for us... ! Undefined control sequence. l.18897 and \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for us... ! Undefined control sequence. l.18897 and \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for us... ! Undefined control sequence. l.18897 and \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}} for us... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18898 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18900 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18901 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.18902 # simple scalar multiplication ! You can't use `macro parameter character #' in horizontal mode. l.18905 # Block diagonal matrix: ! You can't use `macro parameter character #' in vertical mode. l.18908 # ask for dimnames ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18916 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18917 \end{Examples} ! Undefined control sequence. l.18918 \HeaderA {l10n\_info}{Localization Information}{l10n.Rul.info} ! Undefined control sequence. l.18919 \keyword {utilities}{l10n\_info} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18921 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18923 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18925 \begin{Usage} Underfull \hbox (badness 3375) in paragraph at lines 18914--18926 []\OT1/cmr/m/n/10 bill <- outer(bill, c("cat" = 3, "dog" = 4)) kro-necker(fred, bill, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18929 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18931 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.18933 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18934 \item[\code{MBCS}] If a multi-byte character set in use? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18935 \item[\code{UTF-8}] Is this a UTF-8 locale? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18936 \item[\code{Latin-1}] Is this a Latin-1 locale? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18937 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18938 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18940 \begin{SeeAlso} \relax ! Undefined control sequence. l.18941 \code {\LinkA{Sys.getlocale}{Sys.getlocale}}, \code{\LinkA{localeconv... ! Undefined control sequence. l.18941 \code{\LinkA {Sys.getlocale}{Sys.getlocale}}, \code{\LinkA{localeconv... ! Undefined control sequence. l.18941 ...A{Sys.getlocale}{Sys.getlocale}}, \code {\LinkA{localeconv}{locale... ! Undefined control sequence. l.18941 ...etlocale}{Sys.getlocale}}, \code{\LinkA {localeconv}{localeconv}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18942 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18944 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18945 \begin{ExampleCode} ! Missing $ inserted. $ l.18946 l10n_ info() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18947 \end{ExampleCode} ! Missing $ inserted. $ l.18947 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18948 \end{Examples} ! Undefined control sequence. l.18949 \HeaderA {labels}{Find Labels from Object}{labels} ! Undefined control sequence. l.18950 \methaliasA {labels.default}{labels}{labels.default} ! Undefined control sequence. l.18951 \keyword {print}{labels} ! Undefined control sequence. l.18952 \keyword {models}{labels} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18954 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18957 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18959 \begin{Usage} Underfull \hbox (badness 2343) in paragraph at lines 18936--18960 []\OT1/cmr/m/n/10 Is this a Latin-1 lo-cale? Sys.getlocaleSys.getlocale, lo-c ale-con- Underfull \hbox (badness 3792) in paragraph at lines 18936--18960 \OT1/cmr/m/n/10 vlo-cale-conv l10n$[]\OML/cmm/m/it/10 nfo\OT1/cmr/m/n/10 ()$ la-bels-Find La-bels from Ob-ject-la-bels la- [186 Chapter 8 [163]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18963 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18965 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18966 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18967 \item[\code{object}] Any \R{} object: the function is generic. ! Undefined control sequence. l.18967 \item[\code{object}] Any \R {} object: the function is generic. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18968 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18969 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18970 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18972 \begin{Value} ! Undefined control sequence. l.18974 is the names or \code {seq\_along(x)} and for a data frame or array it ! Undefined control sequence. l.18975 is the dimnames (with \code {NULL} expanded to \code{seq\_len(d[i])}. ! Undefined control sequence. l.18975 ...mes (with \code{NULL} expanded to \code {seq\_len(d[i])}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18976 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18978 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18982 \end{References} ! Undefined control sequence. l.18983 \HeaderA {lapply}{Apply a Function over a List or Vector}{lapply} ! Undefined control sequence. l.18984 \aliasA {replicate}{lapply}{replicate} ! Undefined control sequence. l.18985 \aliasA {sapply}{lapply}{sapply} ! Undefined control sequence. l.18986 \aliasA {simplify2array}{lapply}{simplify2array} ! Undefined control sequence. l.18987 \aliasA {vapply}{lapply}{vapply} ! Undefined control sequence. l.18988 \keyword {iteration}{lapply} ! Undefined control sequence. l.18989 \keyword {list}{lapply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18991 \begin{Description} \relax ! Undefined control sequence. l.18992 \code {lapply} returns a list of the same length as \code{X}, each ! Undefined control sequence. l.18992 ...urns a list of the same length as \code {X}, each ! Undefined control sequence. l.18993 ...f which is the result of applying \code {FUN} to the ! Undefined control sequence. l.18994 corresponding element of \code {X}. ! Undefined control sequence. l.18996 \code {sapply} is a user-friendly version and wrapper of \code{lapply} ! Undefined control sequence. l.18996 ...r-friendly version and wrapper of \code {lapply} ! Undefined control sequence. l.18997 ...returning a vector, matrix or, if \code {simplify = "array"}, an ! Undefined control sequence. l.18998 array if appropriate, by applying \code {simplify2array()}. ! Undefined control sequence. l.18999 \code {sapply(x, f, simplify = FALSE, USE.NAMES = FALSE)} is the same as ! Undefined control sequence. l.19000 \code {lapply(x, f)}. ! Undefined control sequence. l.19002 \code {vapply} is similar to \code{sapply}, but has a pre-specified ! Undefined control sequence. l.19002 \code{vapply} is similar to \code {sapply}, but has a pre-specified ! Undefined control sequence. l.19006 \code {replicate} is a wrapper for the common use of \code{sapply} for ! Undefined control sequence. l.19006 ...s a wrapper for the common use of \code {sapply} for ! Undefined control sequence. l.19010 \code {simplify2array()} is the utility called from \code{sapply()} ! Undefined control sequence. l.19010 ...ray()} is the utility called from \code {sapply()} ! Undefined control sequence. l.19011 when \code {simplify} is not false and is similarly called from ! Undefined control sequence. l.19012 \code {\LinkA{mapply}{mapply}()}. ! Undefined control sequence. l.19012 \code{\LinkA {mapply}{mapply}()}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19013 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19015 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19027 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19029 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19030 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19031 \item[\code{X}] a vector (atomic or list) or an \code{\LinkA{express... ! Undefined control sequence. l.19031 ...] a vector (atomic or list) or an \code {\LinkA{expression}{expres... ! Undefined control sequence. l.19031 ...tor (atomic or list) or an \code{\LinkA {expression}{expression}} ! Undefined control sequence. l.19033 by \code {base::\LinkA{as.list}{as.list}}. ! Undefined control sequence. l.19033 by \code{base::\LinkA {as.list}{as.list}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19034 \item[\code{FUN}] the function to be applied to each element of \cod... ! Undefined control sequence. l.19034 ... to be applied to each element of \code {X}: ! Undefined control sequence. l.19036 \code {+}, \code{\%*\%}, the function name must be backquoted or quoted. ! Undefined control sequence. l.19036 \code{+}, \code {\%*\%}, the function name must be backquoted or quoted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19037 \item[\code{...}] optional arguments to \code{FUN}. ! Undefined control sequence. l.19037 ...\code{...}] optional arguments to \code {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19038 \item[\code{simplify}] logical or character string; should the resul... ! Undefined control sequence. l.19040 possible? For \code {sapply} it must be named and not abbreviated. ! Undefined control sequence. l.19041 The default value, \code {TRUE}, returns a vector or matrix if approp... ! Undefined control sequence. l.19042 whereas if \code {simplify = "array"} the result may be an ! Undefined control sequence. l.19043 \code {\LinkA{array}{array}} of ``rank'' ! Undefined control sequence. l.19043 \code{\LinkA {array}{array}} of ``rank'' ! Undefined control sequence. l.19044 (\eqn {=}{}\code{length(dim(.))}) one higher than the result ! Undefined control sequence. l.19044 (\eqn{=}{}\code {length(dim(.))}) one higher than the result ! Undefined control sequence. l.19045 of \code {FUN(X[[i]])}. ! LaTeX Error: Lonely \ [164item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19046 \item[\code{USE.NAMES}] logical; if \code{TRUE} and if \code{X} is c... ! Undefined control sequence. l.19046 \item[\code{USE.NAMES}] logical; if \code {TRUE} and if \code{X} is c... ! Undefined control sequence. l.19046 ...}] logical; if \code{TRUE} and if \code {X} is character, ! Undefined control sequence. l.19047 use \code {X} as \code{\LinkA{names}{names}} for the result unless it... ! Undefined control sequence. l.19047 use \code{X} as \code {\LinkA{names}{names}} for the result unless it... ! Undefined control sequence. l.19047 use \code{X} as \code{\LinkA {names}{names}} for the result unless it... ! Undefined control sequence. l.19048 ...ady. Since this argument follows \code {...} its name cannot [187]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19050 \item[\code{FUN.VALUE}] a (generalized) vector; a template for the r... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19052 \item[\code{n}] integer: the number of replications. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19053 \item[\code{expr}] the expression (a \LinkA{language object}{languag... ! Undefined control sequence. l.19053 ...m[\code{expr}] the expression (a \LinkA {language object}{language... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19056 \item[\code{x}] a list, typically returned from \code{lapply()}. ! Undefined control sequence. l.19056 ...] a list, typically returned from \code {lapply()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19057 \item[\code{higher}] logical; if true, \code{simplify2array()} will ... ! Undefined control sequence. l.19057 ...[\code{higher}] logical; if true, \code {simplify2array()} will pr... ! Undefined control sequence. l.19059 \code {higher = FALSE} would return a matrix (or vector) only. ! Undefined control sequence. l.19060 These two cases correspond to \code {sapply(*, simplify = "array")} or ! Undefined control sequence. l.19061 \code {simplify = TRUE}, respectively. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19062 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19063 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19065 \begin{Details} \relax ! Undefined control sequence. l.19066 \code {FUN} is found by a call to \code{\LinkA{match.fun}{match.fun}}... ! Undefined control sequence. l.19066 \code{FUN} is found by a call to \code {\LinkA{match.fun}{match.fun}}... ! Undefined control sequence. l.19066 ...FUN} is found by a call to \code{\LinkA {match.fun}{match.fun}} an... ! Undefined control sequence. l.19069 environment of the call to \code [165 {lapply}. ! Undefined control sequence. l.19071 Function \code {FUN} must be able to accept as input any of the ! Undefined control sequence. l.19072 elements of \code {X}. If the latter is an atomic vector, \code{FUN} ! Undefined control sequence. l.19072 ...f the latter is an atomic vector, \code {FUN} ! Undefined control sequence. l.19073 ...th-one vector of the same type as \code {X}. ! Undefined control sequence. l.19075 Arguments in \code {...} cannot have the same name as any of the ! Undefined control sequence. l.19077 \code {FUN}. In general-purpose code it is good practice to name the ! Undefined control sequence. l.19078 first two arguments \code {X} and \code{FUN} if \code{...} is passed ! Undefined control sequence. l.19078 first two arguments \code{X} and \code {FUN} if \code{...} is passed ! Undefined control sequence. l.19078 ...uments \code{X} and \code{FUN} if \code {...} is passed ! Undefined control sequence. l.19079 ...s both avoids partial matching to \code {FUN} and ensures ! Undefined control sequence. l.19080 ...ssage is given if arguments named \code {X} or ! Undefined control sequence. l.19081 \code {FUN} are passed through \code{...}. ! Undefined control sequence. l.19081 \code{FUN} are passed through \code {...}. ! Undefined control sequence. l.19083 Simplification in \code {sapply} is only attempted if \code{X} has ! Undefined control sequence. l.19083 ...code{sapply} is only attempted if \code {X} has ! Undefined control sequence. l.19085 of \code {X} are all of the same (positive) length. If the common ! Undefined control sequence. l.19087 ... corresponding to each element of \code {X}. ! Undefined control sequence. l.19089 Simplification is always done in \code {vapply}. This function ! Undefined control sequence. l.19090 checks that all values of \code {FUN} are compatible with the ! Undefined control sequence. l.19091 \code {FUN.VALUE}, in that they must have the same length and type. ! Undefined control sequence. l.19095 ... S4 classes should pass a list to \code {lapply} and ! Undefined control sequence. l.19096 \code {vapply}: the internal coercion is done by the \code{as.list} in ! Undefined control sequence. l.19096 ... internal coercion is done by the \code {as.list} in ! Undefined control sequence. l.19101 \code {lapply} and \code{vapply} are \LinkA{primitive}{primitive} fun... ! Undefined control sequence. l.19101 \code{lapply} and \code {vapply} are \LinkA{primitive}{primitive} fun... ! Undefined control sequence. l.19101 \code{lapply} and \code{vapply} are \LinkA {primitive}{primitive} fun... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19102 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19104 \begin{Value} ! Undefined control sequence. l.19105 For \code {lapply}, \code{sapply(simplify = FALSE)} and ! Undefined control sequence. l.19105 For \code{lapply}, \code {sapply(simplify = FALSE)} and ! Undefined control sequence. l.19106 \code {replicate(simplify = FALSE)}, a list. ! Undefined control sequence. l.19108 For \code {sapply(simplify = TRUE)} and \code{replicate(simplify = ! Undefined control sequence. l.19108 ...code{sapply(simplify = TRUE)} and \code {replicate(simplify = ! Undefined control sequence. l.19109 TRUE)}: if \code {X} has length zero or \code{n = 0}, an empty list. ! Undefined control sequence. l.19109 ...}: if \code{X} has length zero or \code {n = 0}, an empty list. ! Undefined control sequence. l.19111 \code {X} (of length \code{n} for \code{replicate}). If simplification ! Undefined control sequence. l.19111 \code{X} (of length \code {n} for \code{replicate}). If simplification ! Undefined control sequence. l.19111 \code{X} (of length \code{n} for \code {replicate}). If simplification ! Undefined control sequence. l.19117 \code {vapply} returns a vector or array of type matching the ! Undefined control sequence. l.19118 \code {FUN.VALUE}. If \code{length(FUN.VALUE) == 1} a ! Undefined control sequence. l.19118 \code{FUN.VALUE}. If \code {length(FUN.VALUE) == 1} a ! Undefined control sequence. l.19119 vector of the same length as \code {X} is returned, otherwise ! Undefined control sequence. l.19120 an array. If \code {FUN.VALUE} is not an \code{\LinkA{array}{array}}... ! Undefined control sequence. l.19120 ...y. If \code{FUN.VALUE} is not an \code {\LinkA{array}{array}}, the ! Undefined control sequence. l.19120 ...\code{FUN.VALUE} is not an \code{\LinkA {array}{array}}, the ! Undefined control sequence. l.19121 result is a matrix with \code {length(FUN.VALUE)} rows and ! Undefined control sequence. l.19122 \code {length(X)} columns, otherwise an array \code{a} with ! Undefined control sequence. l.19122 ...h(X)} columns, otherwise an array \code {a} with ! Undefined control sequence. l.19123 \code {\LinkA{dim}{dim}(a) == c(dim(FUN.VALUE), length(X))}. ! Undefined control sequence. l.19123 \code{\LinkA {dim}{dim}(a) == c(dim(FUN.VALUE), length(X))}. ! Undefined control sequence. l.19125 ...he array value are taken from the \code {FUN.VALUE} ! Undefined control sequence. l.19129 \code {X} as in \code{sapply}. ! Undefined control sequence. l.19129 \code{X} as in \code {sapply}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19130 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19132 \begin{Note} \relax ! Undefined control sequence. l.19133 \code {sapply(*, simplify = FALSE, USE.NAMES = FALSE)} is ! Undefined control sequence. l.19134 equivalent to \code {lapply(*)}. [188]] ! Undefined control sequence. l.19136 ...cal reasons, the calls created by \code {lapply} are ! Undefined control sequence. l.19137 ... and code has been written (e.g., \code {bquote}) that ! Undefined control sequence. l.19139 form \code {FUN(X[[i]], ...)}, with \code{i} replaced by the current ! Undefined control sequence. l.19139 form \code{FUN(X[[i]], ...)}, with \code {i} replaced by the current ! Undefined control sequence. l.19141 be if \code {FUN} uses \code{\LinkA{sys.call}{sys.call}} or ! Undefined control sequence. l.19141 be if \code{FUN} uses \code {\LinkA{sys.call}{sys.call}} or ! Undefined control sequence. l.19141 be if \code{FUN} uses \code{\LinkA {sys.call}{sys.call}} or ! Undefined control sequence. l.19142 \code {\LinkA{match.call}{match.call}} or if it is a primitive functi... ! Undefined control sequence. l.19142 \code{\LinkA {match.call}{match.call}} or if it is a primitive functi... ! Undefined control sequence. l.19144 ...ions with a wrapper, so that e.g.~\code {lapply(ll, function(x) ! Undefined control sequence. l.19146 \code {is.numeric} occurs correctly. ! Undefined control sequence. l.19148 If \code {expr} is a function call, be aware of assumptions about where ! Undefined control sequence. l.19149 ...evaluated, and in particular what \code {...} might refer to. ! Undefined control sequence. l.19151 additional named arguments to \code {replicate}: see `Examples'. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19152 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19154 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19158 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19160 \begin{SeeAlso} \relax ! Undefined control sequence. l.19161 \code {\LinkA{apply}{apply}}, \code{\LinkA{tapply}{tapply}}, ! Undefined control sequence. l.19161 \code{\LinkA {apply}{apply}}, \code{\LinkA{tapply}{tapply}}, ! Undefined control sequence. l.19161 \code{\LinkA{apply}{apply}}, \code {\LinkA{tapply}{tapply}}, ! Undefined control sequence. l.19161 \code{\LinkA{apply}{apply}}, \code{\LinkA {tapply}{tapply}}, ! Undefined control sequence. l.19162 \code {\LinkA{mapply}{mapply}} for applying a function to \bold{m}ult... ! Undefined control sequence. l.19162 \code{\LinkA {mapply}{mapply}} for applying a function to \bold{m}ult... ! Undefined control sequence. l.19162 ...pply}} for applying a function to \bold {m}ultiple ! Undefined control sequence. l.19163 arguments, and \code Overfull \hbox (22.06111pt too wide) in paragraph at lines 14306--14306 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [166 {\LinkA{rapply}{rapply}} for a \bold{r}ecursive ... ! Undefined control sequence. l.19163 arguments, and \code{\LinkA {rapply}{rapply}} for a \bold{r}ecursive ... ! Undefined control sequence. l.19163 ...ode{\LinkA{rapply}{rapply}} for a \bold {r}ecursive version of ! Undefined control sequence. l.19164 \code {lapply()}, \code{\LinkA{eapply}{eapply}} for applying a functi... ! Undefined control sequence. l.19164 \code{lapply()}, \code {\LinkA{eapply}{eapply}} for applying a functi... ! Undefined control sequence. l.19164 \code{lapply()}, \code{\LinkA {eapply}{eapply}} for applying a functi... ! Undefined control sequence. l.19165 entry in an \code {\LinkA{environment}{environment}}. ! Undefined control sequence. l.19165 entry in an \code{\LinkA {environment}{environment}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19166 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19168 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19169 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19173 # compute the list mean for each list element ! You can't use `macro parameter character #' in horizontal mode. l.19175 # median and quartiles for each list element ! You can't use `macro parameter character #' in horizontal mode. l.19178 i39 <- sapply(3:9, seq) # list of vectors ! You can't use `macro parameter character #' in vertical mode. l.19183 # # sapply(*, "array") -- artificial example ! You can't use `macro parameter character #' in vertical mode. l.19183 ## sapply(*, "array") -- artificial example ! You can't use `macro parameter character #' in vertical mode. l.19193 # # use of replicate() with parameters: ! You can't use `macro parameter character #' in vertical mode. l.19193 ## use of replicate() with parameters: ! You can't use `macro parameter character #' in horizontal mode. l.19195 # does not work: bar <- function(n, ...) replicate(n, foo(...)) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19198 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19199 \end{Examples} ! Undefined control sequence. l.19200 \HeaderA {Last.value}{Value of Last Evaluated Expression}{Last.value} ! Undefined control sequence. l.19201 \aliasA {.Last.value}{Last.value}{.Last.value} ! Undefined control sequence. l.19202 \keyword {programming}{Last.value} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.19204 \begin{Description} \relax ! Undefined control sequence. l.19205 ...e internal evaluation of a top-level \R {} expression ! Undefined control sequence. l.19206 is always assigned to \code {.Last.value} (in \code{package:base}) ! Undefined control sequence. l.19206 ...ssigned to \code{.Last.value} (in \code {package:base}) ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19208 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19210 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19214 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19216 \begin{Details} \relax ! Undefined control sequence. l.19217 ...level assignment \emph{is} put in \code {.Last.value}, ! Undefined control sequence. l.19220 Do not assign to \code {.Last.value} in the workspace, because this ! Undefined control sequence. l.19221 ...sk the object of the same name in \code {package:base}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19222 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19224 \begin{SeeAlso} \relax ! Undefined control sequence. l.19225 \code {\LinkA{eval}{eval}} ! Undefined control sequence. l.19225 \code{\LinkA {eval}{eval}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19226 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19228 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19229 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19230 # # These will not work correctly from example(), ! You can't use `macro parameter character #' in horizontal mode. l.19230 ## These will not work correctly from example(), ! You can't use `macro parameter character #' in horizontal mode. l.19231 # # but they will in make check or if pasted in, ! You can't use `macro parameter character #' in horizontal mode. l.19231 ## but they will in make check or if pasted in, ! You can't use `macro parameter character #' in horizontal mode. l.19232 # # as example() does not run them at the top level ! You can't use `macro parameter character #' in horizontal mode. l.19232 ## as example() does not run them at the top level ! You can't use `macro parameter character #' in horizontal mode. l.19233 gamma(1:15) # think of some intensive calculation... ! You can't use `macro parameter character #' in horizontal mode. l.19234 fac14 <- .Last.value # keep them ! You can't use `macro parameter character #' in horizontal mode. l.19236 library("splines") # returns invisibly ! You can't use `macro parameter character #' in horizontal mode. l.19237 .Last.value # shows what library(.) above returned ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19239 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19240 \end{Examples} ! Undefined control sequence. l.19241 \HeaderA {La\_library}{LAPACK Library}{La.Rul.library} ! Undefined control sequence. l.19242 \keyword {utilities}{La\_library} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19244 \begin{Description} \relax ! Undefined control sequence. l.19245 ...me of the shared object file with \code {LAPACK} implementation ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19247 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19249 \begin{Usage} [189 Overfull \hbox (33.55849pt too wide) in paragraph at lines 14354--14354 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [167]This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19253 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19255 \begin{Value} ! Undefined control sequence. l.19256 A character vector of length one (\code {""} when the name is not kno... ! Undefined control sequence. l.19257 ...be used as an indication of which \code {LAPACK} ! Undefined control sequence. l.19258 ...mentation is in use. Typically, the \R {} version of \code{LAPACK... ! Undefined control sequence. l.19258 .... Typically, the \R{} version of \code {LAPACK} will ! Undefined control sequence. l.19259 appear as \code {libRlapack.so} (\code{libRlapack.dylib}), depending ... ! Undefined control sequence. l.19259 appear as \code{libRlapack.so} (\code {libRlapack.dylib}), depending ... ! Undefined control sequence. l.19260 R was built. Note that \code {libRlapack.so} (\code{libRlapack.dylib... ! Undefined control sequence. l.19260 ... Note that \code{libRlapack.so} (\code {libRlapack.dylib}) may ! Undefined control sequence. l.19261 also be shown for an external \code {LAPACK} implementation that had ... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19265 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19267 \begin{SeeAlso} \relax ! Undefined control sequence. l.19268 \code {\LinkA{extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19268 \code{\LinkA {extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19269 including \code {BLAS}. ! Undefined control sequence. l.19271 \code {\LinkA{La\_version}{La.Rul.version}} for the version of LAPACK... ! Undefined control sequence. l.19271 \code{\LinkA {La\_version}{La.Rul.version}} for the version of LAPACK... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19272 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19274 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19275 \begin{ExampleCode} ! Missing $ inserted. $ l.19276 La]_ library() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19277 \end{ExampleCode} ! Missing $ inserted. $ l.19277 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19278 \end{Examples} ! Undefined control sequence. l.19279 \HeaderA {La\_version}{LAPACK Version}{La.Rul.version} ! Undefined control sequence. l.19280 \keyword {utilities}{La\_version} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19282 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19284 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19286 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19290 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19292 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19294 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19296 \begin{SeeAlso} \relax ! Undefined control sequence. l.19297 \code {\LinkA{extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19297 \code{\LinkA {extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19299 \code {\LinkA{La\_library}{La.Rul.library}} for binary/executable fil... ! Undefined control sequence. l.19299 \code{\LinkA {La\_library}{La.Rul.library}} for binary/executable fil... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19300 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19302 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19303 \begin{ExampleCode} ! Missing $ inserted. $ l.19304 La_ version() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19305 \end{ExampleCode} ! Missing $ inserted. $ l.19305 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19306 \end{Examples} ! Undefined control sequence. l.19307 \HeaderA {length}{Length of an Object}{length} ! Undefined control sequence. l.19308 \aliasA {length<\Rdash{}}{length}{length<.Rdash.} ! Undefined control sequence. l.19308 \aliasA{length<\Rdash {}}{length}{length<.Rdash.} ! Undefined control sequence. l.19309 \methaliasA {length<\Rdash{}.factor}{length}{length<.Rdash..factor} ! Undefined control sequence. l.19309 \methaliasA{length<\Rdash {}.factor}{length}{length<.Rdash..factor} ! Undefined control sequence. l.19310 \keyword {attribute}{length} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19312 \begin{Description} \relax ! Undefined control sequence. l.19314 any other \R {} object for which a method has been defined. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19315 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19317 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19322 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19324 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19325 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19326 \item[\code{x}] an \R{} object. For replacement, a vector or factor. ! Undefined control sequence. l.19326 \item[\code{x}] an \R {} object. For replacement, a vector or factor. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19327 \item[\code{value}] a non-negative integer or double (which will be ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19328 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19329 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19331 \begin{Details} \relax ! Undefined control sequence. l.19333 classes of objects, see \LinkA {InternalMethods}{InternalMethods}. \... ! Undefined control sequence. l.19333 ...ternalMethods}{InternalMethods}. \code {length<-} has a ! Undefined control sequence. l.19334 \code {"factor"} method. ! Undefined control sequence. l.19338 ...padded out to its new length with \code {\LinkA{NA}{NA}}s ! Undefined control sequence. l.19338 ...out to its new length with \code{\LinkA {NA}{NA}}s ! Undefined control sequence. l.19339 (\code {nul} for raw vectors). ! Undefined control sequence. l.19341 Both are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19342 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19344 \begin{Value} ! Undefined control sequence. l.19345 The default method for \code {length} currently returns a non-negative ! Undefined control sequence. l.19346 \code {\LinkA{integer}{integer}} of length 1, except for vectors of m... ! Undefined control sequence. l.19346 \code{\LinkA {integer}{integer}} of length 1, except for vectors of m... ! Undefined control sequence. l.19347 \eqn {2^{31}-1}{} elements, when it returns a double. ! Missing $ inserted. $ l.19347 \eqn{2^ {31}-1}{} elements, when it returns a double. ! Extra }, or forgotten $. l.19347 \eqn{2^{31}-1} {} elements, when it returns a double. ! Missing $ inserted. $ l.19348 ! Undefined control sequence. l.19351 environment, and \code {NULL} has length 0. For expressions and ! Undefined control sequence. l.19352 pairlists (including \LinkA {language objects}{language objects} and ... ! Undefined control sequence. l.19356 ...orm removes all the attributes of \code [168 {x} except its ! Undefined control sequence. l.19357 ...ted (and if necessary extended by \code {""}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19358 \end{Value} ! Missing } inserted. } l.19358 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19360 \begin{Section} {Warning} ! Undefined control sequence. l.19362 other than one (\Rhref {https://CRAN.R-project.org/package=Formula}{\... ! Undefined control sequence. l.19362 ...RAN.R-project.org/package=Formula}{\pkg {Formula}}) and that retur... ! Undefined control sequence. l.19363 \code {\LinkA{double}{double}} (\Rhref{https://CRAN.R-project.org/pac... ! Undefined control sequence. l.19363 \code{\LinkA {double}{double}} (\Rhref{https://CRAN.R-project.org/pac... ! Undefined control sequence. l.19363 \code{\LinkA{double}{double}} (\Rhref {https://CRAN.R-project.org/pac... ! Undefined control sequence. l.19363 ...CRAN.R-project.org/package=Matrix}{\pkg {Matrix}}), even with non-... ! Undefined control sequence. l.19364 (earlier versions of \Rhref {https://CRAN.R-project.org/package=sets}... ! Undefined control sequence. l.19364 ...//CRAN.R-project.org/package=sets}{\pkg {sets}}). Where a single d... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19367 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19369 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19373 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19375 \begin{SeeAlso} \relax ! Undefined control sequence. l.19376 \code {nchar} for counting the number of characters in character ! Undefined control sequence. l.19377 vectors, \code {\LinkA{lengths}{lengths}} for getting the length of e... ! Undefined control sequence. l.19377 vectors, \code{\LinkA {lengths}{lengths}} for getting the length of e... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19379 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H f]or immediate help. ... l.19381 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19382 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19383 length(diag(4)) # = 16 (4 x 4) ! You can't use `macro parameter character #' in horizontal mode. l.19384 length(options()) # 12 or more ! You can't use `macro parameter character #' in horizontal mode. l.19385 length(y ~ x1 + x2 + x3) # 3 ! Missing $ inserted. $ l.19386 length(expression(x, {y <- x^ 2; y+2}, x^y)) # 3 ! Extra }, or forgotten $. l.19386 length(expression(x, {y <- x^2; y+2} , x^y)) # 3 ! You can't use `macro parameter character #' in math mode. l.19386 ...expression(x, {y <- x^2; y+2}, x^y)) # 3 ! Missing $ inserted. $ l.19387 Underfull \hbox (badness 3118) in paragraph at lines 19356--19387 []\OT1/cmr/m/n/10 The re-place-ment form re-moves all the at-tributes of x ex-c ept its Underfull \hbox (badness 10000) in paragraph at lines 19356--19387 \OT1/cmr/m/n/10 other than one (https://CRAN.R-project.org/package=FormulaFormu la) Underfull \hbox (badness 8056) in paragraph at lines 19356--19387 \OT1/cmr/m/n/10 and that re-turn a vec-tor of type dou-ble-dou-ble (https://CRA N.R- Underfull \hbox (badness 1521) in paragraph at lines 19356--19387 \OT1/cmr/m/n/10 project.org/package=MatrixMatrix), even with non-integer val-ue s (ear-lier [190] [169 ! You can't use `macro parameter character #' in vertical mode. l.19388 # # from example(warpbreaks) ! You can't use `macro parameter character #' in vertical mode. l.19388 ## from example(warpbreaks) ! You can't use `macro parameter character #' in math mode. l.19392 length(fm1$call) # 3, lm() and two arguments. ! You can't use `macro parameter character #' in math mode. l.19393 length(formula(fm1)) # 3, ~ lhs rhs ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19394 \end{ExampleCode} ! Missing $ inserted. $ l.19394 \end{ExampleCode} ! Missing } inserted. } l.19394 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19395 \end{Examples} ! Undefined control sequence. l.19396 \HeaderA {lengths}{Lengths of List or Vector Elements}{lengths} ! Undefined control sequence. l.19397 \keyword {attribute}{lengths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19399 \begin{Description} \relax ! Undefined control sequence. l.19400 Get the length of each element of a \code {\LinkA{list}{list}} or atomic ! Undefined control sequence. l.19400 ...ength of each element of a \code{\LinkA {list}{list}} or atomic ! Undefined control sequence. l.19401 vector (\code {\LinkA{is.atomic}{is.atomic}}) as an integer or numeri... ! Undefined control sequence. l.19401 vector (\code{\LinkA {is.atomic}{is.atomic}}) as an integer or numeri... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19402 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19404 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 19391--19405 []\OT1/cmr/m/n/10 fm1 <- lm(breaks wool * ten-sion, data = warp-breaks) Underfull \hbox (badness 10000) in paragraph at lines 19391--19405 \OT1/cmr/m/n/10 length(fm1$\OML/cmm/m/it/10 call\OT1/cmr/m/n/10 )3\OML/cmm/m/it /10 ; lm\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 andtwoarguments:length\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 formula\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 fm\OT1/cmr/m/n/10 1))3\OML/cmm/m/it/10 ; []lhsrhs$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19408 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19410 \begin{Arguments} ] ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19411 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19412 \item[\code{x}] a \code{\LinkA{list}{list}}, list-like such as an ! Undefined control sequence. l.19412 \item[\code{x}] a \code {\LinkA{list}{list}}, list-like such as an ! Undefined control sequence. l.19412 \item[\code{x}] a \code{\LinkA {list}{list}}, list-like such as an ! Undefined control sequence. l.19413 \code {\LinkA{expression}{expression}} or an atomic vector (for which... ! Undefined control sequence. l.19413 \code{\LinkA {expression}{expression}} or an atomic vector (for which... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19415 \item[\code{use.names}] logical indicating if the result should inhe... ! Undefined control sequence. l.19416 \code {\LinkA{names}{names}} from \code{x}. ! Undefined control sequence. l.19416 \code{\LinkA {names}{names}} from \code{x}. ! Undefined control sequence. l.19416 \code{\LinkA{names}{names}} from \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19417 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19418 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19420 \begin{Details} \relax ! Undefined control sequence. l.19421 This function loops over \code {x} and returns a compatible vector ! Undefined control sequence. l.19422 ...ing the length of each element in \code {x}. Effectively, ! Undefined control sequence. l.19423 \code {length(x[[i]])} is called for all \code{i}, so any methods on ! Undefined control sequence. l.19423 ...length(x[[i]])} is called for all \code {i}, so any methods on ! Undefined control sequence. l.19424 \code {length} are considered. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19425 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19427 \begin{Value} ! Undefined control sequence. l.19428 A non-negative \code {\LinkA{integer}{integer}} of length \code{lengt... ! Undefined control sequence. l.19428 A non-negative \code{\LinkA {integer}{integer}} of length \code{lengt... ! Undefined control sequence. l.19428 ...inkA{integer}{integer}} of length \code {length(x)}, ! Undefined control sequence. l.19430 \eqn {2^{31}-1}{} elements, when it returns a double vector. ! Missing $ inserted. $ l.19430 \eqn{2^ {31}-1}{} elements, when it returns a double vector. ! Extra }, or forgotten $. l.19430 \eqn{2^{31}-1} {} elements, when it returns a double vector. ! Undefined control sequence. l.19431 When \code {use.names} is true, the names are taken from the names on ! Undefined control sequence. l.19432 \code {x}, if any. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19433 \end{Value} ! Missing $ inserted. $ l.19433 \end{Value} ! Missing } inserted. } l.19433 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19435 \begin{Note} \relax ! Undefined control sequence. l.19436 One raison d'être of \code {lengths(x)} is its use as a ! Undefined control sequence. l.19437 more efficient version of \code {sapply(x, length)} and similar ! Undefined control sequence. l.19438 \code {*apply} calls to \code{\LinkA{length}{length}}. This is the r... ! Undefined control sequence. l.19438 \code{*apply} calls to \code {\LinkA{length}{length}}. This is the r... ! Undefined control sequence. l.19438 \code{*apply} calls to \code{\LinkA {length}{length}}. This is the r... ! Undefined control sequence. l.19439 \code {x} may be an atomic vector, even though \code{lengths(x)} is ! Undefined control sequence. l.19439 ... be an atomic vector, even though \code {lengths(x)} is ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19441 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19443 \begin{SeeAlso} \relax ! Undefined control sequence. l.19444 \code {\LinkA{length}{length}} for getting the length of any \R{} obj... ! Undefined control sequence. l.19444 \code{\LinkA {length}{length}} for getting the length of any \R{} obj... ! Undefined control sequence. l.19444 ...ngth}} for getting the length of any \R {} object. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19445 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Compaentering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texinion for explanation. Type H for immediate help. ... l.19447 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19448 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19450 # # summarize by month ! You can't use `macro parameter character #' in horizontal mode. l.19450 ## summarize by month ! You can't use `macro parameter character #' in horizontal mode. l.19453 # # merge result ! You can't use `macro parameter character #' in horizontal mode. l.19453 ## merge result ! You can't use `macro parameter character #' in math mode. l.19455 # # but this is safer and cleaner, but can be slower ! You can't use `macro parameter character #' in math mode. l.19455 ## but this is safer and cleaner, but can be slower ! Missing $ inserted. $ l.19457 Overfull \hbox (139.39459pt too wide) in paragraph at lines 19415--19457 \OT1/cmr/m/n/10 1[]\OML/cmm/m/it/10 elements; whenitreturnsadoublevector:When[] istrue; thenamesaretakenfromthenamesonx; ifany:$ Underfull \hbox (badness 10000) in paragraph at lines 19415--19457 \OT1/cmr/m/n/10 av-gOz <- lap-ply(l, mean, na.rm=TRUE) merge re- Underfull \hbox (badness 10000) in paragraph at lines 19415--19457 \OT1/cmr/m/n/10 sult airquality$\OML/cmm/m/it/10 avgOz < \OMS/cmsy/m/n/10 ^^@\O ML/cmm/m/it/10 rep\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 unlist\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 avgOz; use:names \OT1/cmr/m/n/10 = Overfull \hbox (5.79164pt too wide) in paragraph at lines 19415--19457 \OML/cmm/m/it/10 FALSE\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; lengths\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 l\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 butthisissaferandcleane r; butcanbeslowerairquality$\OT1/cmr/m/n/10 avgOz ! You can't use `macro parameter character #' in vertical mode. l.19458 # # should always be true, except when a length does not fit in 32 bits ! You can't use `macro parameter character #' in vertical mode. l.19458 ## should always be true, except when a length does not fit in 32 bits ! You can't use `macro parameter character #' in vertical mode. l.19461 # # empty lists are not a problem ! You can't use `macro parameter character #' in vertical mode. l.19461 ## empty lists are not a problem ! You can't use `macro parameter character #' in vertical mode. l.19465 # # nor are "list-like" expressions: ! You can't use `macro parameter character #' in vertical mode. l.19465 ## nor are "list-like" expressions: ! You can't use `macro parameter character #' in vertical mode. l.19468 # # and we should dispatch to length methods ! You can't use `macro parameter character #' in vertical mode. l.19468 ## and we should dispatch to length methods ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19472 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19473 \end{Examples} ! Undefined control sequence. l.19474 \HeaderA {levels}{Levels Attributes}{levels} ! Undefined control sequence. l.19475 \methaliasA {levels.default}{levels}{levels.default} ! Undefined control sequence. l.19476 \aliasA {levels<\Rdash{}}{level (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:s}{levels<.Rdash.} ! Undefined control sequence. l.19476 \aliasA{levels<\Rdash {}}{levels}{levels<.Rdash.} ! Undefined control sequence. l.19477 \methaliasA {levels<\Rdash{}.factor}{levels}{levels<.Rdash..factor} ! Undefined control sequence. l.19477 \methaliasA{levels<\Rdash {}.factor}{levels}{levels<.Rdash..factor} ! Undefined control sequence. l.19478 \keyword {category}{levels} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19480 \begin{Description} \relax ! Undefined control sequence. l.19481 \code {levels} provides access to the levels attribute of a variable. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19484 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19486 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 19468--19487 \OT1/cmr/m/n/10 vap-ply(dates, length, in-te-ger(1L)))) lev-el-sLevels At-tri buteslevels Underfull \hbox (badness 10000) in paragraph at lines 19468--19487 \OT1/cmr/m/n/10 lev-els.defaultlevelslevels.default lev-els for immediate help. ... l.19491 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19493 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19494 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19495 \item[\code{x}] an object, for example a factor. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19496 \item[\code{value}] A valid value for \code{levels(x)}. ! Undefined control sequence. l.19496 ...m[\code{value}] A valid value for \code {levels(x)}. ! Undefined control sequence. l.19497 For the default method, \code {NULL} or a character vector. For the ! Undefined control sequence. l.19498 \code {factor} method, a vector of character strings with length at ! Undefined control sequence. l.19499 least the number of levels of \code pdf, {x}, or a named list specifying h... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19501 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19502 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19504 \begin{Details} \relax ! Undefined control sequence. l.19507 function is that for \code {\LinkA{factor}{factor}}s. ! Undefined control sequence. l.19507 function is that for \code{\LinkA {factor}{factor}}s. [191 Underfull \hbox (badness 10000) in paragraph at lines 14597--14604 @texttt internet/nanoftp.c[]@textrm '[], `@texttt src/modules/internet/nanohtt p.c[]@textrm '[] and `@texttt src/modules/ [170 fonts,]] ! Undefined control sequence. l.19509 For the factor replacement method, a \code {NA} in \code{value} ! Undefined control sequence. l.19509 ...eplacement method, a \code{NA} in \code {value} ! Undefined control sequence. l.19511 ...with that level to be replaced by \code {NA}. ! Undefined control sequence. l.19514 \code {levels(x) <- value} is not the same as (and is preferred to) ! Undefined control sequence. l.19515 \code {attr(x, "levels") <- value}. ! Undefined control sequence. l.19517 The replacement function is \LinkA {primitive}{primitive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19518 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19520 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19524 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19526 \begin{SeeAlso} \relax ! Undefined control sequence. l.19527 \code {\LinkA{nlevels}{nlevels}}, \code{\LinkA{relevel}{relevel}}, \c... ! Undefined control sequence. l.19527 \code{\LinkA {nlevels}{nlevels}}, \code{\LinkA{relevel}{relevel}}, \c... ! Undefined control sequence. l.19527 \code{\LinkA{nlevels}{nlevels}}, \code {\LinkA{relevel}{relevel}}, \c... ! Undefined control sequence. l.19527 ...\LinkA{nlevels}{nlevels}}, \code{\LinkA {relevel}{relevel}}, \code... ! Undefined control sequence. l.19527 ... \code{\LinkA{relevel}{relevel}}, \code {\LinkA{reorder}{reorder}}. ! Undefined control sequence. l.19527 ...\LinkA{relevel}{relevel}}, \code{\LinkA {reorder}{reorder}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19528 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19530 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19531 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19532 # # assign individual levels ! You can't use `macro parameter character #' in horizontal mode. l.19532 ## assign individual levels ! You can't use `macro parameter character #' in vertical mode. l.19538 # # or as a group ! You can't use `macro parameter character #' in vertical mode. l.19538 ## or as a group ! You can't use `macro parameter character #' in vertical mode. l.19543 # # combine some levels ! You can't use `macro parameter character #' in vertical mode. l.19543 ## combine some levels ! You can't use `macro parameter character #' in vertical mode. l.19549 # # same, using a named list ! You can't use `macro parameter character #' in vertical mode. l.19549 ## same, using a named list ! You can't use `macro parameter character #' in vertical mode. l.19556 # # we can add levels this way: ! You can't use `macro parameter character #' in vertical mode. l.19556 ## we can add levels this way: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19564 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19565 \end{Examples} ! Undefined control sequence. l.19566 \HeaderA {libcurlVersion}{Report Version of libcurl}{libcurlVersion} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19568 \begin{Description} \relax ! Undefined control sequence. l.19569 Report version of \code {libcurl} in use. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19570 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19572 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19576 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19578 \begin{Value} ! Undefined control sequence. l.19579 A character string, with value the \code {libcurl} version in use or ! Undefined control sequence. l.19580 \code {""} if none is. If \code{libcurl} is available, has attributes ! Undefined control sequence. l.19580 \code{""} if none is. If \code {libcurl} is available, has attributes ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19582 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19583 \item[\code{ssl\_version}] A character string naming the SSL/TLS imp... ! Undefined control sequence. l.19584 and version, possibly \code {"none"}. It is intended for the version ! Undefined control sequence. l.19585 ...d, but not all implementations of \code {libcurl} use ! Undefined control sequence. l.19586 ...SSL --- for example macOS reports \code {"SecureTranspart"}, its ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19589 \item[\code{libssh\_version}] A character string naming the \code{li... ! Undefined control sequence. l.19589 ...n}] A character string naming the \code {libssh} version, ! Undefined control sequence. l.19591 e.g.~\code {scp} and \code{sftp} protocols). Where present, ! Undefined control sequence. l.19591 e.g.~\code{scp} and \code {sftp} protocols). Where present, ! Undefined control sequence. l.19592 something like \code {"libssh2/1.5.0"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19594 \item[\code{protocols}] A character vector of the names of supported ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19596 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19597 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19599 \begin{Section} {Warning} ! Undefined control sequence. l.19600 In late 2017 a \code {libcurl} installation was seen divided into two ! Undefined control sequence. l.19601 libraries, \code {libcurl} and \code{libcurl-feature}, and the first ! Undefined control sequence. l.19601 libraries, \code{libcurl} and \code {libcurl-feature}, and the first ! Undefined control sequence. l.19604 \code {libcurlVersion} was misleading. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19605 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19607 \begin{SeeAlso} \relax ! Undefined control sequence. l.19608 \code {\LinkA{extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19608 \code{\LinkA {extSoftVersion}{extSoftVersion}} for versions of other ... ! Undefined control sequence. l.19611 \code {\LinkA{curlGetHeaders}{curlGetHeaders}}, \code{\LinkA{download... ! Undefined control sequence. l.19611 \code{\LinkA {curlGetHeaders}{curlGetHeaders}}, \code{\LinkA{download... ! Undefined control sequence. l.19611 ...curlGetHeaders}{curlGetHeaders}}, \code {\LinkA{download.file}{dow... ! Undefined control sequence. l.19611 ...Headers}{curlGetHeaders}}, \code{\LinkA {download.file}{download.f... ! Undefined control sequence. l.19612 \code {\LinkA{url}{url}} for functions which (optionally) use \code{l... ! Undefined control sequence. l.19612 \code{\LinkA {url}{url}} for functions which (optionally) use \code{l... ! Undefined control sequence. l.19612 ... functions which (optionally) use \code {libcurl}. ! Undefined control sequence. l.19614 \url {http://curl.haxx.se/docs/sslcerts.html} and ! Undefined control sequence. l.19615 \url {http://curl.haxx.se/docs/ssl-compared.html} for more details on ! Undefined control sequence. l.19617 \code {libcurl} used with \R{} uses SecureTransport on macOS, OpenSSL on ! Undefined control sequence. l.19617 \code{libcurl} used with \R {} uses SecureTransport on macOS, OpenSSL on ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19621 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19623 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19624 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19626 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19627 \end{Examples} ! Undefined control sequence. l.19628 \HeaderA {libPaths}{Search Paths for Packages}{libPaths} ! Undefined control sequence. l.19629 \aliasA {.expand\_R\_libs\_env\_var}{libPaths}{.expand.Rul.R.Rul.libs... ! Undefined control sequence. l.19630 \aliasA {.libPaths}{libPaths}{.libPaths} ! Undefined control sequence. l.19631 \aliasA {.Library}{libPaths}{.Library} ! Undefined control sequence. l.19632 \methaliasA {.Library.site}{libPaths}{.Library.site} ! Undefined control sequence. l.19633 \aliasA {R\_LIBS}{libPaths}{R.Rul.LIBS} ! Undefined control sequence. l.19634 \aliasA {R\_LIBS\_SITE}{libPaths}{R.Rul.LIBS.Rul.SITE} ! Undefined control sequence. l.19635 \aliasA {R\_LIBS\_USER}{libPaths}{R.Rul.LIBS.Rul.USER} ! Undefined control sequence. l.19636 \keyword {data}{libPaths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Underfull \hbox (badness 10000) in paragraph at lines 14721--14726 []@textrm Another (D)COM server, @texttt RDCOMServer[]@textrm , may be avail-a ble from Omega-hat, [171 l.19638 \begin{Description} \relax ! Undefined control sequence. l.19639 \code {.libPaths} gets/sets the library trees within which packages are ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19641 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19643 \begin{Usage} Underfull \hbox (badness 7613) in paragraph at lines 19614--19644 []\OT1/cmr/m/n/10 http://curl.haxx.se/docs/sslcerts.html and http://curl.haxx.s e/docs/ssl- Underfull \hbox (badness 10000) in paragraph at lines 19614--19644 \OT1/cmr/m/n/10 pand[]R[]libs[]env[]varlibPaths.expand.Rul.R.Rul.libs.Rul.env.R ul.var .lib-Path- Underfull \hbox (badness 4217) in paragraph at lines 19614--19644 \OT1/cmr/m/n/10 slib-Paths.libPaths .Li-brarylib-Paths.Library .Li-brary.siteli bPaths.Library.site Underfull \hbox (badness 10000) in paragraph at lines 19614--19644 \OT1/cmr/m/n/10 R[]LIBSlibPathsR.Rul.LIBS R[]LIBS[]SITElibPathsR.Rul.LIBS.Rul.S ITE [192] page headings,] tables, [172 conditionals, indexing, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19650 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19652 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19653 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19654 \item[\code{new}] a character vector with the locations of \R{} library ! Undefined control sequence. l.19654 ...aracter vector with the locations of \R {} library ! Undefined control sequence. l.19655 trees. Tilde expansion (\code {\LinkA{path.expand}{path.expand}}) is... ! Undefined control sequence. l.19655 trees. Tilde expansion (\code{\LinkA {path.expand}{path.expand}}) is... ! Undefined control sequence. l.19656 any element contains one of \code {*?[}, globbing is done where ! Undefined control sequence. l.19657 supported by the platform: see \code {\LinkA{Sys.glob}{Sys.glob}}. ! Undefined control sequence. l.19657 ...orted by the platform: see \code{\LinkA {Sys.glob}{Sys.glob}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19658 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19659 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19661 \begin{Details} \relax ! Undefined control sequence. l.19662 \code {.Library} is a character string giving the location of the ! Undefined control sequence. l.19663 default library, the \file {library} subdirectory of \env{R\_HOME}. ! Undefined control sequence. l.19663 ...the \file{library} subdirectory of \env {R\_HOME}. ! Undefined control sequence. l.19665 \code {.Library.site} is a (possibly empty) character vector giving the ! Undefined control sequence. l.19666 ...he site libraries, by default the \file {site-library} ! Undefined control sequence. l.19667 subdirectory of \env {R\_HOME} (which may not exist). ! Undefined control sequence. l.19669 \code {.libPaths} is used for getting or setting the library trees that ! Undefined control sequence. l.19670 \R {} knows about (and hence uses when looking for p] sectioning,ackages). If called ! Undefined control sequence. l.19671 with argument \code {new}, the library search path is set to ! Undefined control sequence. l.19672 the existing directories in \code {unique(c(new, .Library.site, .Libr... ! Undefined control sequence. l.19676 How paths \code {new} with a trailing slash are treated is ! Undefined control sequence. l.19683 variable \env {R\_LIBS} (which should be a colon-separated list of ! Undefined control sequence. l.19684 directories at which \R {} library trees are rooted) followed by thos... ! Undefined control sequence. l.19685 environment variable \env {R\_LIBS\_USER}. Only directories which exist ! Undefined control sequence. l.19688 By default \env {R\_LIBS} is unset, and \env{R\_LIBS\_USER} is set to ! Undefined control sequence. l.19688 ...efault \env{R\_LIBS} is unset, and \env {R\_LIBS\_USER} is set to ! Undefined control sequence. l.19689 directory \file {R/\var{R.version\$platform}-library/\var{x.y}} ! Undefined control sequence. l.19689 directory \file{R/\var {R.version\$platform}-library/\var{x.y}} ! Undefined control sequence. l.19689 .../\var{R.version\$platform}-library/\var {x.y}} ! Undefined control sequence. l.19690 of the home directory (or \file {Library/R/\var{x.y}/library} for ! Undefined control sequence. l.19690 ...home directory (or \file{Library/R/\var {x.y}/library} for ! Undefined control sequence. l.19691 CRAN macOS builds), for \R {} \var{x.y.z}. ! Undefined control sequence. l.19691 CRAN macOS builds), for \R{} \var {x.y.z}. Underfull \hbox (badness 6220) in paragraph at lines 19688--19692 []\OT1/cmr/m/n/10 By de-fault R[]LIBS is un-set, and R[]LIBS[]USER is set to di - Underfull \hbox (badness 2591) in paragraph at lines 19688--19692 \OT1/cmr/m/n/10 rec-tory R/R.version$platform-library/x.y of the home di-rec-to ry (or Li- ! Undefined control sequence. l.19693 \code {.Library.site} can be set via the environment variable ! Undefined control sequence. l.19694 \env {R\_LIBS\_SITE} (as a non-empty colon-separated list of library ... ! Undefined control sequence. l.19696 Both \env {R\_LIBS\_USER} and \env{R\_LIBS\_SITE} feature possible ! Undefined control sequence. l.19696 Both \env{R\_LIBS\_USER} and \env {R\_LIBS\_SITE} feature possible ! Undefined control sequence. l.19697 expansion of specifiers for \R {} version specific information as par... ! Undefined control sequence. l.19699 with a \samp {\%} and are followed by a single letter (use \samp{\%\%} ! Undefined control sequence. l.19699 ... followed by a single letter (use \samp {\%\%} ! Undefined control sequence. l.19700 to obtain \samp {\%}), with currently available conversion ! Undefined control sequence. \samp {\%V} l.19704 \item[\samp{\%V}] \R{} version number including the patchlevel (e.g., ! Undefined control sequence. l.19704 \item[\samp{\%V}] \R {} version number including the patchlevel (e.g., ! Undefined control sequence. l.19705 \samp {2.5.0}). ! Undefined control sequence. \samp {\%v} l.19706 \item[\samp{\%v}] \R{} version number excluding the patchlevel (e.g., ! Undefined control sequence. l.19706 \item[\samp{\%v}] \R {} version number excluding the patchlevel (e.g., ! Undefi toc,ned control sequence. l.19707 \samp {2.5}). ! Undefined control sequence. \samp {\%p} l.19708 \item[\samp{\%p}] the platform for which \R{} was built, the value of ! Undefined control sequence. l.19708 ...m[\samp{\%p}] the platform for which \R {} was built, the value of ! Undefined control sequence. l.19709 \code {\LinkA{R.version}{R.version}\$platform}. ! Undefined control sequence. l.19709 \code{\LinkA {R.version}{R.version}\$platform}. ! Undefined control sequence. \samp {\%o} l.19710 \item[\samp{\%o}] the underlying operating system, the value of ! Undefined control sequence. l.19711 \code {\LinkA{R.version}{R.version}\$os}. ! Undefined control sequence. l.19711 \code{\LinkA {R.version}{R.version}\$os}. ! Undefined control sequence. \samp {\%a} l.19712 \item[\samp{\%a}] the architecture (CPU) \R{} was built on/for, the ! Undefined control sequence. l.19712 ...m[\samp{\%a}] the architecture (CPU) \R {} was built on/for, the ! Undefined control sequence. l.19713 value of \code {\LinkA{R.version}{R.version}\$arch}. ! Undefined control sequence. l.19713 value of \code{\LinkA {R.version}{R.version}\$arch}. Underfull \hbox (badness 10000) in paragraph at lines 19712--19714 []\OT1/cmr/m/n/10 the ar-chi-tec-ture (CPU) was built on/for, the value of [193 environments, Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173 defuns,] macros,] cross references, insertions, ! Undefined control sequence. l.19717 (See \code {\LinkA{version}{version}} for details on R version inform... ! Undefined control sequence. l.19717 (See \code{\LinkA {version}{version}} for details on R version inform... ! Undefined control sequence. l.19719 Function \code {.libPaths} always uses the values of \code{.Library} ! Undefined control sequence. l.19719 ...bPaths} always uses the values of \code {.Library} ! Undefined control sequence. l.19720 and \code {.Library.site} in the base namespace. \code{.Library.site} ! Undefined control sequence. l.19720 ...ary.site} in the base namespace. \code {.Library.site} ! Undefined control sequence. l.19721 can be set by the site in \file {Rprofile.site}, which should be ! Undefined control sequence. l.19722 followed by a call to \code {.libPaths(.libPaths())} to make use of the ! Undefined control sequence. l.19726 \code {\LinkA{normalizePath}{normalizePath}(winslash = "/")}. ! Undefined control sequence. l.19726 \code{\LinkA {normalizePath}{normalizePath}(winslash = "/")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19727 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19729 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19731 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19733 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19737 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19739 \begin{SeeAlso} \relax ! Undefined control sequence. l.19740 \code {\LinkA{library}{library}} ! Undefined control sequence. l.19740 \code{\LinkA {library}{library}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19741 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19743 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) localization, [174 l.19744 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19745 .libPaths() # all library trees R knows about ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19746 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19747 \end{Examples} ! Undefined control sequence. l.19748 \HeaderA {library}{Loading/Attaching and Listing of Packages}{library} ! Undefined control sequence. l.19749 \aliasA {.noGenerics}{library}{.noGenerics} ! Undefined control sequence. l.19750 \aliasA {format.libraryIQR}{library}{format.libraryIQR} ! Undefined control sequence. l.19751 \aliasA {format.packageInfo}{library}{format.packageInfo} ! Undefined control sequence. l.19752 \aliasA {print.libraryIQR}{library}{print.libraryIQR} ! Undefined control sequence. l.19753 \aliasA {print.packageInfo}{library}{print.packageInfo} ! Undefined control sequence. l.19754 \aliasA {require}{library}{require} ! Undefined control sequence. l.19755 \keyword {data}{library} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19757 \begin{Description} \relax ! Undefined control sequence. l.19758 \code {library} and \code{require} load and attach add-on packages. ! Undefined control sequence. l.19758 \code{library} and \code {require} load and attach add-on packages. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19759 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19761 \begin{Usage} Overfull \hbox (14.19536pt too wide) in paragraph at lines 19725--19762 \OT1/cmr/m/n/10 mat.packageInfolibraryformat.packageInfo print.libraryIQRlibrar yprint.libraryIQR ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19772 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19774 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19775 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19776 \item[\code{package, help}] the name of a package, given as a \LinkA... ! Undefined control sequence. l.19776 ...he name of a package, given as a \LinkA {name}{name} or ! Undefined control sequence. l.19778 whether \code {character.only} is \code{FALSE} (default) or ! Undefined control sequence. l.19778 whether \code{character.only} is \code {FALSE} (default) or ! Undefined control sequence. l.19779 \code {TRUE}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19780 \item[\code{pos}] the position on the search list at which to attach... ! Undefined control sequence. l.19782 search list as given by \code {\LinkA{search}{search}()}. ! Undefined control sequence. l.19782 search list as given by \code{\LinkA {search}{search}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19783 \item[\code{lib.loc}] a character vector describing the location of ... ! Undefined control sequence. l.19783 ...er vector describing the location of \R {} ! Undefined control sequence. l.19784 library trees to search through, or \code {NULL}. The default value ! Undefined control sequence. l.19785 of \code {NULL} corresponds to all libraries currently known to ! Undefined control sequence. l.19786 \code {\LinkA{.libPaths}{.libPaths}()}. ! Undefined control sequence. l.19786 \code{\LinkA {.libPaths}{.libPaths}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19788 \item[\code{character.only}] a logical indicating whether \code{pack... ! Undefined control sequence. l.19788 ...ly}] a logical indicating whether \code {package} or ! Undefined control sequence. l.19789 \code {help} can be assumed to be character strings. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19790 \item[\code{logical.return}] logical. If it is \code{TRUE}, \code{... ! Undefined control sequence. l.19790 ...gical.return}] logical. If it is \code {TRUE}, \code{FALSE} or ! Undefined control sequence. l.19790 ... logical. If it is \code{TRUE}, \code {FALSE} or ! Undefined control sequence. l.19791 \code {TRUE} is returned to indicate success. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19792 \item[\code{warn.conflicts}] logical. If \code{ formatting,] and turning on texinfo input format.)TRUE}, warnings are ! Undefined control sequence. l.19792 ...ode{warn.conflicts}] logical. If \code {TRUE}, warnings are ! Undefined control sequence. l.19793 printed about \code {\LinkA{conflicts}{conflicts}} from attaching the... ! Undefined control sequence. l.19793 printed about \code{\LinkA {conflicts}{conflicts}} from attaching the... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19797 \item[\code{verbose}] a logical. If \code{TRUE}, additional diagnos... ! Undefined control sequence. l.19797 \item[\code{verbose}] a logical. If \code {TRUE}, additional diagnos... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19799 \item[\code{quietly}] a logical. If \code{TRUE}, no message confirming ! Undefined control sequence. l.19799 \item[\code{quietly}] a logical. If \code {TRUE}, no message confirming ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19802 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19803 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19805 \begin{Details} \relax ! Undefined control sequence. l.19806 \code {library(package)} and \code{require(package)} both load the ! Undefined control sequence. l.19806 \code{library(package)} and \code {require(package)} both load the ! Undefined control sequence. l.19807 namespace of the package with name \code {package} and attach it on the ! Undefined control sequence. l.19808 search list. \code {require} is designed for use inside other ! Undefined control sequence. l.19809 functions; it returns \code {FALSE} and gives a warning (rather than an ! Undefined control sequence. l.19810 error as \code {library()} does by default) if the package does not ! Undefined control sequence. l.19813 ...nt to reload such a package, call \code {\LinkA{detach}{detach}(un... ! Undefined control sequence. l.19813 ...eload such a package, call \code{\LinkA {detach}{detach}(unload = ! Undefined control sequence. l.19814 TRUE)} or \code {\LinkA{unloadNamespace}{unloadNamespace}} first.) ... ! Undefined control sequence. l.19814 TRUE)} or \code{\LinkA {unloadNamespace}{unloadNamespace}} first.) ... ! Undefined control sequence. l.19816 \code {\LinkA{requireNamespace}{requireNamespace}}. ! Undefined control sequence. l.19816 \code{\LinkA {requireNamespace}{requireNamespace}}. [194 (Function and variable index) [175 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.vrs ! Undefined control sequence. l.19819 \code {\LinkA{suppressPackageStartupMessages}{suppressPackageStartupM... ! Undefined control sequence. l.19819 \code{\LinkA {suppressPackageStartupMessages}{suppressPackageStartupM... ! Undefined control sequence. l.19820 messages from \R {} itself but not necessarily all those from package ! Undefined control sequence. l.19823 If \code {library} is called with no \code{package} or \code{help} ! Undefined control sequence. l.19823 If \code{library} is called with no \code {package} or \code{help} ! Undefined control sequence. l.19823 ... called with no \code{package} or \code {help} ! Undefined control sequence. l.19825 by \code {lib.loc}, and returns the corresponding information in an ! Undefined control sequence. l.19826 object of class \code {"libraryIQR"}. (The structure of this class may ! Undefined control sequence. l.19827 change in future versions.) Use \code {.packages(all = TRUE)} to ! Undefined control sequence. l.19829 \code {\LinkA{installed.packages}{installed.packages}()} for even mor... ! Undefined control sequence. l.19829 \code{\LinkA {installed.packages}{installed.packages}()} for even mor... ! Undefined control sequence. l.19831 \code {library(help = somename)} computes basic information about the ! Undefined control sequence. l.19832 package \pkg {somename}, and returns this in an object of class ! Undefined control sequence. l.19833 \code {"packageInfo"}. (The structure of this class may change in ! Undefined control sequence. l.19834 ...When used with the default value (\code {NULL}) for ! Undefined control sequence. l.19835 \code {lib.loc}, the attached packages are searched before the librar... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19836 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19838 \begin{Value} ! Undefined control sequence. l.19839 Normally \code {library} returns (invisibly) the list of attached ! Undefined control sequence. l.19840 packages, but \code {TRUE} or \code{FALSE} if \code{logical.return} is ! Undefined control sequence. l.19840 packages, but \code{TRUE} or \code {FALSE} if \code{logical.return} is ! Undefined control sequence. l.19840 ...ut \code{TRUE} or \code{FALSE} if \code {logical.return} is ! Undefined control sequence. l.19841 \code {TRUE}. When called as \code{library()} it returns an object of ! Undefined control sequence. l.19841 \code{TRUE}. When called as \code {library()} it returns an object of ! Undefined control sequence. l.19842 class \code {"libraryIQR"}, and for \code{library(help=)}, one of ! Undefined control sequence. l.19842 class \code{"libraryIQR"}, and for \code {library(help=)}, one of ! Undefined control sequence. l.19843 class \code {"packageInfo"}. ! Undefined control sequence. l.19845 \code {require} returns (invisibly) a logical indicating whether the ... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19847 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19849 \begin{Section} {Licenses} ! Undefined control sequence. l.19852 \code {\LinkA{getOption}{getOption}("checkPackageLicense") == TRUE}, ... ! Undefined control sequence. l.19852 \code{\LinkA {getOption}{getOption}("checkPackageLicense") == TRUE}, ... ! Undefined control sequence. l.19855 licenses is stored in file \file {\textasciitilde{}/.R/licensed}. In... ! Undefined control sequence. l.19859 As from \R {} 3.4.0 the license check is done when the namespace is l... ! Undefined control sequence. l.19862 e.g.~\url {https://en.wikipedia.org/wiki/FOSS}) packages are ! Undefined control sequence. l.19864 \code {\LinkA{available.packages}{available.packages}} but applied to... ! Undefined control sequence. l.19864 \code{\LinkA {available.packages}{available.packages}} but applied to... Underfull \hbox (badness 10000) in paragraph at lines 19861--19866 []\OT1/cmr/m/n/10 Free or Open Source Soft-ware (FOSS, Underfull \hbox (badness 1048) in paragraph at lines 19861--19866 \OT1/cmr/m/n/10 e.g. https://en.wikipedia.org/wiki/FOSS) pack-ages are de-ter-m ined by the ! Undefined control sequence. l.19867 There can also be a site-wide file \file {R\_HOME/etc/licensed.site} of ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19869 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19871 \begin{Section} {Formal methods} ! Undefined control sequence. l.19872 \code {library} takes some further actions when package \pkg{methods} ! Undefined control sequence. l.19872 ... some further actions when package \pkg {methods} ! Undefined control sequence. l.19875 \pkg {base}) to be generic, and this information is cached whenever ! Undefined control sequence. l.19876 such a namespace is loaded after \pkg {methods} and re-defined functions ! Undefined control sequence. l.19877 (\LinkA {implicit generic}{implicit generic}s) are excluded from the ... ! Undefined control sequence. l.19880 \code {.noGenerics} (with any value) in the namespace. Naturally, if... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19883 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19885 \begin{Note} \relax ! Undefined control sequence. l.19886 \code {library} and \code{require} can only load/attach an ! Undefined control sequence. l.19886 \code{library} and \code {require} can only load/attach an ! Undefine) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi)d control sequence. l.19888 \file {DESCRIPTION} file containing a \samp{Built:} field. ! Undefined control sequence. l.19888 \file{DESCRIPTION} file containing a \samp {Built:} field. ! Undefined control sequence. l.19891 ...ilar operating system as given by \code {R.version\$platform} ! Undefined control sequence. l.19898 (e.g.~\code {i386-pc-linux-gnu} code can be built on an ! Undefined control sequence. l.19899 \code {x86\_64-unknown-linux-gnu} OS). [195 [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] ! Undefined control sequence. l.19901 The package name given to \code {library} and \code{require} must match ! Undefined control sequence. l.19901 ... name given to \code{library} and \code {require} must match ! Undefined control sequence. l.19902 the name given in the package's \file {DESCRIPTION} file exactly, even ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19905 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19907 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19911 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19913 \begin{SeeAlso} \relax ! Undefined control sequence. l.19914 \code {\LinkA{.libPaths}{.libPaths}}, \code{\LinkA{.packages}{.packag... ! Undefined control sequence. l.19914 \code{\LinkA {.libPaths}{.libPaths}}, \code{\LinkA{.packages}{.packag... ! Undefined control sequence. l.19914 \code{\LinkA{.libPaths}{.libPaths}}, \code {\LinkA{.packages}{.packag... ! Undefined control sequence. l.19914 ...kA{.libPaths}{.libPaths}}, \code{\LinkA {.packages}{.packages}}. ! Undefined control sequence. l.19916 \code {\LinkA{attach}{attach}}, \code{\LinkA{detach}{detach}}, \code{... ! Undefined control sequence. l.19916 \code{\LinkA {attach}{attach}}, \code{\LinkA{detach}{detach}}, \code{... ! Undefined control sequence. l.19916 \code{\LinkA{attach}{attach}}, \code {\LinkA{detach}{detach}}, \code{... ! Undefined control sequence. l.19916 ...e{\LinkA{attach}{attach}}, \code{\LinkA {detach}{detach}}, \code{\... ! Undefined control sequence. l.19916 ...}, \code{\LinkA{detach}{detach}}, \code {\LinkA{search}{search}}, ! Undefined control sequence. l.19916 ...e{\LinkA{detach}{detach}}, \code{\LinkA {search}{search}}, ! Undefined control sequence. l.19917 \code {\LinkA{objects}{objects}}, \code{\LinkA{autoload}{autoload}}, ! Undefined control sequence. l.19917 \code{\LinkA {objects}{objects}}, \code{\LinkA{autoload}{autoload}}, ! Undefined control sequence. l.19917 \code{\LinkA{objects}{objects}}, \code {\LinkA{autoload}{autoload}}, ! Undefined control sequence. l.19917 ...\LinkA{objects}{objects}}, \code{\LinkA {autoload}{autoload}}, ! Undefined control sequence. l.19918 \code {\LinkA{requireNamespace}{requireNamespace}}, ! Undefined control sequence. l.19918 \code{\LinkA {requireNamespace}{requireNamespace}}, ! Undefined control sequence. l.19919 \code {\LinkA{library.dynam}{library.dynam}}, \code{\LinkA{data}{data}}, ! Undefined control sequence. l.19919 \code{\LinkA {library.dynam}{library.dynam}}, \code{\LinkA{data}{data}}, ! Undefined control sequence. l.19919 ...A{library.dynam}{library.dynam}}, \code {\LinkA{data}{data}}, ! Undefined control sequence. l.19919 ...ry.dynam}{library.dynam}}, \code{\LinkA {data}{data}}, ! Undefined control sequence. l.19920 \code {\LinkA{install.packages}{install.packages}} and ! Undefined control sequence. l.19920 \code{\LinkA {install.packages}{install.packages}} and ! Undefined control sequence. l.19921 \code {\LinkA{installed.packages}{installed.packages}}; ! Undefined control sequence. l.19921 \code{\LinkA {installed.packages}{installed.packages}}; ! Undefined control sequence. l.19922 \code {\LinkA{INSTALL}{INSTALL}}, \code{\LinkA{REMOVE}{REMOVE}}. ! Undefined control sequence. l.19922 \code{\LinkA {INSTALL}{INSTALL}}, \code{\LinkA{REMOVE}{REMOVE}}. ! Undefined control sequence. l.19922 \code{\LinkA{INSTALL}{INSTALL}}, \code {\LinkA{REMOVE}{REMOVE}}. ! Undefined control sequence. l.19922 ...\LinkA{INSTALL}{INSTALL}}, \code{\LinkA {REMOVE}{REMOVE}}. Underfull \hbox (badness 2005) in paragraph at lines 19916--19923 \OT1/cmr/m/n/10 re-quire-Names-pac-erequire-Names-pace, li-brary.dynamlibrary.d ynam, data-data, ! Undefined control sequence. l.19925 \code {\LinkA{options}{options}(defaultPackages=)}: see also \code{\L... ! Undefined control sequence. l.19925 \code{\LinkA {options}{options}(defaultPackages=)}: see also \code{\L... ! Undefined control sequence. l.19925 ...ons}(defaultPackages=)}: see also \code {\LinkA{Startup}{Startup}}. ! Undefined control sequence. l.19925 ...faultPackages=)}: see also \code{\LinkA {Startup}{Startup}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19926 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19928 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19929 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.19930 library() # list all available packages ! You can't use `macro parameter character #' in horizontal mode. l.19931 library(lib.loc = .Library) # list all packages in the default library ! You can't use `macro parameter character #' in horizontal mode. l.19932 library(help = splines) # documentation on package 'splines' ! You can't use `macro parameter character #' in horizontal mode. l.19933 library(splines) # attach package 'splines' ! You can't use `macro parameter character #' in horizontal mode. l.19934 require(splines) # the same ! You can't use `macro parameter character #' in horizontal mode. l.19935 search() # "splines", too Underfull \hbox (badness 10000) in paragraph at lines 19924--19937 []\OT1/cmr/m/n/10 The ini-tial set of pack-ages at-tached is set by op-tion-sop - ! You can't use `macro parameter character #' in vertical mode. l.19938 # if the package name is in a character vector, use ! You can't use `macro parameter character #' in horizontal mode. l.19946 require(nonexistent) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.19947 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.19947 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.19948 # # if you want to mask as little as possible, use ! You can't use `macro parameter character #' in horizontal mode. l.19948 ## if you want to mask as little as possible, use ! You can't use `macro parameter character #' in vertical mode. l.19951 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.19951 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19952 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19953 \end{Examples} ! Undefined control sequence. l.19954 \HeaderA {library.dynam}{Loading DLLs from Packages}{library.dynam} ! Undefined control sequence. l.19955 \aliasA {.dynLibs}{library.dynam}{.dynLibs} ! Undefined control sequence. l.19956 \methaliasA {library.dynam.unload}{library.dynam}{library.dynam.unload} ! Undefined control sequence. l.19957 \keyword {data}{library.dynam} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19959 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19962 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19964 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 19951--19965 []\OT1/cmr/m/n/10 End(Not run) li-brary.dynamLoading DLLs from Underfull \hbox (badness 10000) in paragraph at lines 19951--19965 \OT1/cmr/m/n/10 Pack-ages-li-brary.dynam .dyn-Lib-sli-brary.dynam.dynLibs li- Underfull \hbox (badness 10000) in paragraph at lines 19951--19965 \OT1/cmr/m/n/10 brary.dynam.unloadlibrary.dynamlibrary.dynam.unload datal-i-bra ry.dynam ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19976 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19978 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19979 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19980 \item[\code{chname}] a character string naming a DLL (also known as ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19982 \item[\code{package}] a character vector with the name of package. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19983 \item[\code{lib.loc}] a character vector describing the location of ... ! Undefined control sequence. l.19983 ...er vector describing the location of \R {} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19985 \item[\code{libpath}] the path to the loaded package whose DLL is to... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19986 \item[\code{verbose}] a logical value indicating whether an announce... ! Undefined control sequence. l.19989 \code {\LinkA{options}{options}}. ! Undefined control sequence. l.19989 \code{\LinkA {options}{options}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19990 \item[\code{file.ext}] the extension (including \samp{.} if used) to... ! Undefined control sequence. l.19990 ...le.ext}] the extension (including \samp {.} if used) to append [196] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19993 \item[\code{...}] additional arguments needed by some libraries that ! Undefined control sequence. l.19994 are passed to the call to \code {\LinkA{dyn.load}{dyn.load}} to control ! Undefined control sequence. l.19994 are passed to the call to \code{\LinkA {dyn.load}{dyn.load}} to control ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19996 \item[\code{new}] a list of \code{"DLLInfo"} objects corresponding t... ! Undefined control sequence. l.19996 \item[\code{new}] a list of \code {"DLLInfo"} objects corresponding t... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19998 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19999 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20001 \begin{Details} \relax ! Undefined control sequence. l.20002 See \code {\LinkA{dyn.load}{dyn.load}} for what sort of objects these... ! Undefined control sequence. l.20002 See \code{\LinkA {dyn.load}{dyn.load}} for what sort of objects these... ! Undefined control sequence. l.20004 \code {library.dynam} is designed to be used inside a package rather ! Undefined control sequence. l.20006 \code {\LinkA{.onLoad}{.onLoad}}. The system-specific extension for ... ! Undefined control sequence. l.20006 \code{\LinkA {.onLoad}{.onLoad}}. The system-specific extension for ... ! Undefined control sequence. l.20007 \file {.so} or \file{.sl} on Unix-alike systems, ! Undefined control sequence. l.20007 \file{.so} or \file {.sl} on Unix-alike systems, ! Undefined control sequence. l.20008 \file {.dll} on Windows) should not be added. ! Undefined control sequence. l.20010 \code {library.dynam.unload} is designed for use in ! Undefined control sequence. l.20011 \code {\LinkA{.onUnload}{.onUnload}}: it unloads the DLL and updates ... ! Undefined control sequence. l.20011 \code{\LinkA {.onUnload}{.onUnload}}: it unloads the DLL and updates ... ! Undefined control sequence. l.20012 \code {.dynLibs()} ! Undefined control sequence. l.20014 \code {.dynLibs} is used for getting (with no argument) or setting the ! Undefined control sequence. l.20015 ...rrently loaded by packages (using \code {library.dynam}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20016 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20018 \begin{Value} ! Undefined control sequence. l.20019 If \code {chname} is not specified, \code{library.dynam} returns an ! Undefined control sequence. l.20019 If \code{chname} is not specified, \code {library.dynam} returns an ! Undefined control sequence. l.20020 object of class \code {"\LinkA{DLLInfoList}{DLLInfoList}"} correspond... ! Undefined control sequence. l.20020 object of class \code{"\LinkA {DLLInfoList}{DLLInfoList}"} correspond... ! Undefined control sequence. l.20023 If \code {chname} is specified, an object of class ! Undefined control sequence. l.20024 \code {"\LinkA{DLLInfo}{DLLInfo}"} that identifies the DLL and which ... ! Undefined control sequence. l.20024 \code{"\LinkA {DLLInfo}{DLLInfo}"} that identifies the DLL and which ... ! Undefined control sequence. l.20026 \code {"\LinkA{DLLInfo}{DLLInfo}"} has a method for \code{\$} which c... ! Undefined control sequence. l.20026 \code{"\LinkA {DLLInfo}{DLLInfo}"} has a method for \code{\$} which c... ! Undefined control sequence. l.20026 ...Info}{DLLInfo}"} has a method for \code {\$} which can be used to ! Undefined control sequence. l.20029 \code {library.dynam.unload} invisibly returns an object of class ! Undefined control sequence. l.20030 \code {"\LinkA{DLLInfo}{DLLInfo}"} identifying the DLL successfully u... ! Undefined control sequence. l.20030 \code{"\LinkA {DLLInfo}{DLLInfo}"} identifying the DLL successfully u... ! Undefined control sequence. l.20032 \code {.dynLibs} returns an object of class \code{"\LinkA{DLLInfoList... ! Undefined control sequence. l.20032 ...nLibs} returns an object of class \code {"\LinkA{DLLInfoList}{DLLI... ! Undefined control sequence. l.20032 ...eturns an object of class \code{"\LinkA {DLLInfoList}{DLLInfoList}"} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20034 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20036 \begin{Section} {Warning} ! Undefined control sequence. l.20037 Do not use \code {\LinkA{dyn.unload}{dyn.unload}} on a DLL loaded by ! Undefined control sequence. l.20037 Do not use \code{\LinkA {dyn.unload}{dyn.unload}} on a DLL loaded by ! Undefined control sequence. l.20038 \code {library.dynam}: use \code{library.dynam.unload} to ensure ! Undefined control sequence. l.20038 \code{library.dynam}: use \code {library.dynam.unload} to ensure ! Undefined control sequence. l.20039 that \code {.dynLibs} gets updated. Otherwise a subsequent call to ! Undefined control sequence. l.20040 \code {library.dynam} will be told the object is already loaded. ! Undefined control sequence. l.20044 `Value' section of the help for \code {\LinkA{dyn.unload}{dyn.unload}}. ! Undefined control sequence. l.20044 ...' section of the help for \code{\LinkA {dyn.unload}{dyn.unl [176oad}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20045 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20047 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20051 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20053 \begin{SeeAlso} \relax ! Undefined control sequence. l.20054 \code {\LinkA{getLoadedDLLs}{getLoadedDLLs}} for information on \code... ! Undefined control sequence. l.20054 \code{\LinkA {getLoadedDLLs}{getLoadedDLLs}} for information on \code... ! Undefined control sequence. l.20054 ...etLoadedDLLs}} for information on \code {"DLLInfo"} and ! Undefined control sequence. l.20055 \code {"DLLInfoList"} objects. ! Undefined control sequence. l.20057 \code {\LinkA{.onLoad}{.onLoad}}, \code{\LinkA{library}{library}}, ! Undefined control sequence. l.20057 \code{\LinkA {.onLoad}{.onLoad}}, \code{\LinkA{library}{library}}, ! Undefined control sequence. l.20057 \code{\LinkA{.onLoad}{.onLoad}}, \code {\LinkA{library}{library}}, ! Undefined control sequence. l.20057 ...\LinkA{.onLoad}{.onLoad}}, \code{\LinkA {library}{library}}, ! Undefined control sequence. l.20058 \code {\LinkA{dyn.load}{dyn.load}}, \code{\LinkA{.packages}{.packages}}, ! Undefined control sequence. l.20058 \code{\LinkA {dyn.load}{dyn.load}}, \code{\LinkA{.packages}{.packages}}, ! Undefined control sequence. l.20058 \code{\LinkA{dyn.load}{dyn.load}}, \code {\LinkA{.packages}{.packages}}, ! Undefined control sequence. l.20058 ...inkA{dyn.load}{dyn.load}}, \code{\LinkA {.packages}{.packages}}, ! Undefined control sequence. l.20059 \code {\LinkA{.libPaths}{.libPaths}} ! Undefined control sequence. l.20059 \code{\LinkA {.libPaths}{.libPaths}} ! Undefined control sequence. l.20061 \code {\LinkA{SHLIB}{SHLIB}} for how to create suitable DLLs. ! Undefined control sequence. l.20061 \code{\LinkA {SHLIB}{SHLIB}} for how to create suitable DLLs. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20062 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20064 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20065 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.20066 # # Which DLLs were dynamically loaded by packages? ! You can't use `macro parameter character #' in horizontal mode. l.20066 ## Which DLLs were dynamically loaded by packages? ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20068 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20069 \end{Examples} ! Undefined control sequence. l.20070 \HeaderA {license}{The R License Terms}{license} ! Undefined control sequence. l.20071 \aliasA {licence}{license}{licence} ! Undefined control sequence. l.20072 \keyword {misc}{license} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20074 \begin{Description} \relax ! Undefined control sequence. l.20075 The license terms under which \R {} is distributed. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20076 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20078 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20083 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20085 \begin{Details} \relax ! Undefined control sequence. l.20086 \R {} is distributed under the terms of the GNU GENERAL PUBLIC LICENSE, ! Undefined control sequence. l.20088 version 2 license is in file \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}... ! Undefined control sequence. l.20088 version 2 license is in file \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}... ! Undefined control sequence. l.20088 ... 2 license is in file \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/doc... ! Undefined control sequence. l.20089 and can be viewed by \code {RShowDoc("COPYING")}. Version 3 of the ! Undefined control sequence. l.20090 license can be displayed by \code {RShowDoc("GPL-3")}. ! Undefined control sequence. l.20094 copy of this license is in file \file {\$R\_SHARE\_DIR/licenses/LGPL-... ! Undefined control sequence. l.20095 and can be viewed by \code {RShowDoc("LGPL-2.1")}. Version 3 of the ! Undefined control sequence. l.20096 license can be displayed by \code {RShowDoc("LGPL-3")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20097 \end{Details} ! Undefined control sequence. l.20098 \HeaderA {list}{Lists -- Generic and Dotted Pairs}{list} ! Undefined control sequence. l.20099 \aliasA {alist}{list}{alist} ! Undefined control sequence. l.20100 \aliasA {as.list}{list}{as.list} ! Undefined control sequence. l.20101 \methaliasA {as.list.data.frame}{list}{as.list.data.frame} ! Undefined control sequence. l.20102 \methaliasA {as.list.default}{list}{as.list.default} ! Undefined control sequence. l.20103 \methaliasA {as.list.environment}{list}{as.list.environment} ! Undefined control sequence. l.20104 \methaliasA {as.list.factor}{list}{as.list.factor} ! Undefined control sequence. l.20105 \methaliasA {as.list.function}{list}{as.list.function} ! Undefined control sequence. l.20106 \aliasA {as.pairlist}{list}{as.pairlist} ! Undefined control sequence. l.20107 \aliasA {is.list}{list}{is.list} ! Undefined control sequence. l.20108 \aliasA {is.pairlist}{list}{is.pairlist} ! Undefined control sequence. l.20109 \aliasA {pairlist}{list}{pairlist} ! Undefined control sequence. l.20110 \keyword {list}{list} ! Undefined control sequence. l.20111 \keyword {manip}{list} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20113 \begin{Description} \relax ! Undefined control sequence. l.20114 ..., coerce and check for both kinds of \R {} lists. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20115 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20117 \begin{Usage} Underfull \hbox (badness 7344) in paragraph at lines 20092--20118 []\OT1/cmr/m/n/10 A small num-ber of files (some of the API header files) are Underfull \hbox (badness 10000) in paragraph at lines 20092--20118 \OT1/cmr/m/n/10 dis-tributed un-der the LESSER GNU GEN-ERAL PUB-LIC LI- Underfull \hbox (badness 4686) in paragraph at lines 20092--20118 \OT1/cmr/m/n/10 CENSE, ver-sion 2.1 or later. A copy of this li-cense is in fil e Underfull \hbox (badness 10000) in paragraph at lines 20092--20118 \OT1/cmr/m/n/10 as.list.data.framelistas.list.data.frame as.list.defaultlistas. list.default Underfull \hbox (badness 10000) in paragraph at lines 20092--20118 \OT1/cmr/m/n/10 as.list.environmentlistas.list.environment as.list.factorlistas .list.factor Underfull \hbox (badness 10000) in paragraph at lines 20092--20118 \OT1/cmr/m/n/10 as.list.functionlistas.list.function as.pairlistlistas.pairlist is.listlistis.list [197] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20132 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20134 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20135 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20136 \item[\code{...}] objects, possibly named. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20137 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20138 \item[\code{all.names}] a logical indicating whether to copy all val... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20140 \item[\code{sorted}] a logical indicating whether the \code{\LinkA{n... ! Undefined control sequence. l.20140 ... a logical indicating whether the \code {\LinkA{names}{names}} of ! Undefined control sequence. l.20140 ...cal indicating whether the \code{\LinkA {names}{names}} of ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20143 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20144 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20146 \begin{Details} \relax ! Undefined control sequence. l.20147 Almost all lists in \R {} internally are \emph{Generic Vectors}, whereas ! Undefined control sequence. l.20149 rarely seen by users (except as \code {\LinkA{formals}{formals}} of f... ! Undefined control sequence. l.20149 ...y seen by users (except as \code{\LinkA {formals}{formals}} of fun... ! Undefined control sequence. l.20151 The arguments to \code {list} or \code{pairlist} are of the form ! Undefined control sequence. l.20151 The arguments to \code{list} or \code {pairlist} are of the form ! Undefined control sequence. l.20152 \code {value} or \code{tag = value}. The functions return a list or ! Undefined control sequence. l.20152 \code{value} or \code {tag = value}. The functions return a list or ! Undefined control sequence. l.20156 \code {alist} handles its arguments as if they described function ! Undefined control sequence. l.20158 no value are allowed whereas \code {list} simply ignores them. ! Undefined control sequence. l.20159 \code {alist} is most often used in conjunction with \code{\LinkA{for... ! Undefined control sequence. l.20159 ...st often used in conjunction with \code {\LinkA{formals}{formals}}. ! Undefined control sequence. l.20159 ...n used in conjunction with \code{\LinkA {formals}{formals}}. ! Undefined control sequence. l.20161 \code {as.list} attempts to coerce its argument to a list. For ! Undefined control sequence. l.20164 constituent elements is returned. \code {as.list} is generic, and as ! Undefined control sequence. l.20165 the default method calls \code {\LinkA{as.vector}{as.vector}(mode = "... ! Undefined control sequence. l.20165 the default method calls \code{\LinkA {as.vector}{as.vector}(mode = "... ! Undefined control sequence. l.20166 non-list, methods for \code {as.vector} may be invoked. \code{as.list} ! Undefined control sequence. l.20166 ...\code{as.vector} may be invoked. \code {as.list} ! Undefined control sequence. l.20169 ...consistent with functions such as \code {\LinkA{as.character}{as.c... ! Undefined control sequence. l.20169 ...ent with functions such as \code{\LinkA {as.character}{as.character}} ! Undefined control sequence. l.20173 \code {is.list} returns \code{TRUE} if and only if its argument ! Undefined control sequence. l.20173 \code{is.list} returns \code {TRUE} if and only if its argument ! Undefined control sequence. l.20174 is a \code {list} \emph{or} a \code{pairlist} of \code{length} \eqn{>... ! Undefined control sequence. l.20174 is a \code{list} \emph{or} a \code {pairlist} of \code{length} \eqn{>... ! Undefined control sequence. l.20174 ...t} \emph{or} a \code{pairlist} of \code {length} \eqn{> 0}{}. ! Undefined control sequence. l.20174 ...a \code{pairlist} of \code{length} \eqn {> 0}{}. ! Undefined control sequence. l.20175 \code {is.pairlist} returns \code{TRUE} if and only if the argument ! Undefined control sequence. l.20175 \code{is.pairlist} returns \code {TRUE} if and only if the argument ! Undefined control sequence. l.20176 is a pairlist or \code {NULL} (see below). [198]] ! Undefined control sequence. l.20178 The \code {"\LinkA{environment}{environment}"} method for \code{as.li... ! Undefined control sequence. l.20178 The \code{"\LinkA {environment}{environment}"} method for \code{as.li... ! Undefined control sequence. l.20178 ...onment}{environment}"} method for \code {as.list} copies the ! Undefined control sequence. l.20181 objects are copied. Unless \code {sorted = TRUE}, the list is in no ! Undefined control sequence. l.20187 \code {\LinkA{as.environment}{as.environment}()} method for list obje... ! Undefined control sequence. l.20187 \code{\LinkA {as.environment}{as.environment}()} method for list obje... ! Undefined control sequence. l.20189 An empty pairlist, \code {pairlist()} is the same as ! Undefined control sequence. l.20190 \code {\LinkA{NULL}{NULL}}. This is different from \code{list()}: so... ! Undefined control sequence. l.20190 \code{\LinkA {NULL}{NULL}}. This is different from \code{list()}: so... ! Undefined control sequence. l.20190 ...}{NULL}}. This is different from \code {list()}: some but ! Undefined control sequence. l.20193 \code {as.pairlist} is implemented as \code{\LinkA{as.vector}{as.vect... ! Undefined control sequence. l.20193 \code{as.pairlist} is implemented as \code {\LinkA{as.vector}{as.vect... ! Undefined control sequence. l.20193 ...airlist} is implemented as \code{\LinkA {as.vector}{as.vector}(x, ! Undefined control sequence. l.20195 \code {as.vector}. Lists are copied element-by-element into a pairlist ! Undefined control sequence. l.20199 \code {list}, \code{is.list} and \code{is.pairlist} are ! Undefined control sequence. l.20199 \code{list}, \code {is.list} and \code{is.pairlist} are ! Undefined control sequence. l.20199 \code{list}, \code{is.list} and \code {is.pairlist} are ! Undefined control sequence. l.20200 \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20201 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20203 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20207 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20209 \begin{SeeAlso} \relax ! Undefined control sequence. l.20210 \code {\LinkA{vector}{vector}("list", length)} for creation of a list... ! Undefined control sequence. l.20210 \code{\LinkA {vector}{vector}("list", length)} for creation of a list... ! Undefined control sequence. l.20211 components; \code {\LinkA{c}{c}}, for concatenation; \code{\LinkA{for... ! Undefined control sequence. l.20211 components; \code{\LinkA {c}{c}}, for concatenation; \code{\LinkA{for... ! Undefined control sequence. l.20211 ...\LinkA{c}{c}}, for concatenation; \code {\LinkA{formals}{formals}}. ! Undefined control sequence. l.20211 ...c}{c}}, for concatenation; \code{\LinkA {formals}{formals}}. ! Undefined control sequence. l.20212 \code {\LinkA{unlist}{unlist}} is an approximate inverse to \code{as.... ! Undefined control sequence. l.20212 \code{\LinkA {unlist}{unlist}} is an approximate inverse to \code{as.... ! Undefined control sequence. l.20212 ...st}} is an approximate inverse to \code {as.list()}. ! Undefined control sequence. l.20214 `\LinkA {plotmath}{plotmath}' for the use of \code{list} in plot anno... ! Undefined control sequence. l.20214 ...otmath}{plotmath}' for the use of \code {list} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20215 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20217 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20218 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.20221 # create a plotting structure ! You can't use `macro parameter character #' in horizontal mode. l.20225 is.pairlist(.Options) # a user-level pairlist ! You can't use `macro parameter character #' in vertical mode. l.20227 # # "pre-allocate" an empty list of length 5 ! You can't use `macro parameter character #' in vertical mode. l.20227 ## "pre-allocate" an empty list of length 5 ! You can't use `macro parameter character #' in vertical mode. l.20230 # Argument lists ! You can't use `macro parameter character #' in horizontal mode. l.20232 # Note the specification of a "..." argument: ! You can't use `macro parameter character #' in vertical mode. l.20237 # # environment->list coercion ! You can't use `macro parameter character #' in vertical mode. l.20237 ## environment->list coercion ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20243 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20244 \end{Examples} ! Undefined control sequence. l.20245 \HeaderA {list.files}{List the Files in a Directory/Folder}{list.files} ! Undefined control sequence. l.20246 \aliasA {dir}{list.files}{dir} ! Undefined control sequence. l.20247 \aliasA {list.dirs}{list.files}{list.dirs} ! Undefined control sequence. l.20248 \keyword {file}{list.files} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20250 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20253 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20255 \begin{Usage} Overfull \hbox (6.74693pt too wide) in paragraph at lines 20266--20266 [] \OT1/cmtt/m/n/10 ignore.case = FALSE, include.dirs = FALSE, no.. = FALSE)[] Overfull \hbox (6.74693pt too wide) in paragraph at lines 20266--20266 [] \OT1/cmtt/m/n/10 ignore.case = FALSE, include.dirs = FALSE, no.. = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20267 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20269 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20270 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20271 \item[\code{path}] a character vector of full path names; the default ! Undefined control sequence. l.20272 ...esponds to the working directory, \code {\LinkA{getwd}{getwd}()}. ... ! Undefined control sequence. l.20272 ... to the working directory, \code{\LinkA {getwd}{getwd}()}. Tilde ! Undefined control sequence. l.20273 expansion (see \code {\LinkA{path.expand}{path.expand}}) is performed... ! Undefined control sequence. l.20273 expansion (see \code{\LinkA {path.expand}{path.expand}}) is performed... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20275 \item[\code{pattern}] an optional \LinkA{regular expression}{regular... ! Undefined control sequence. l.20275 \item[\code{pattern}] an optional \LinkA {regular expression}{regular... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20277 \item[\code{all.files}] a logical value. If \code{FALSE}, only the ! Undefined control sequence. l.20277 ...{all.files}] a logical value. If \code {FALSE}, only the ! Undefined control sequence. l.20278 ...f visible files are returned. If \code {TRUE}, [199] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20280 \item[\code{full.names}] a logical value. If \code{TRUE}, the direc... ! Undefined control sequence. l.20280 ...full.names}] a logical value. If \code {TRUE}, the directory ! Undefined control sequence. l.20282 If \code {FALSE}, the file names (rather than paths) are returned. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20283 \item[\code{recursive}] logical. Should the listing recurse into di... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20284 \item[\code{ignore.case}] logical. Should pattern-matching be case-... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20285 \item[\code{include.dirs}] logical. Should subdirectory names be in... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20287 \item[\code{no..}] logical. Should both \code{"."} and \code{".."} ... ! Undefined control sequence. l.20287 ...code{no..}] logical. Should both \code {"."} and \code{".."} be e... ! Undefined control sequence. l.20287 ...ical. Should both \code{"."} and \code {".."} be excluded ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20289 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20290 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20292 \begin{Value} ! Undefined control sequence. l.20294 specified directories, or \code {""} if there were no files. If a ! Undefined control sequence. l.20299 if \code {full.names = TRUE}. ! Undefined control sequence. l.20301 \code {list.dirs} implicitly has \code{all.files = TRUE}, and if ! Undefined control sequence. l.20301 \code{list.dirs} implicitly has \code {all.files = TRUE}, and if ! Undefined control sequence. l.20302 \code {recursive = TRUE}, the answer includes \code{path} itself ! Undefined control sequence. l.20302 ...sive = TRUE}, the answer includes \code {path} itself ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20304 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20306 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20312 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20314 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20316 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20318 \begin{SeeAlso} \relax ! Undefined control sequence. l.20319 \code {\LinkA{file.info}{file.info}}, \code{\LinkA{file.access}{file.... ! Undefined control sequence. l.20319 \code{\LinkA {file.info}{file.info}}, \code{\LinkA{file.access}{file.... ! Undefined control sequence. l.20319 \code{\LinkA{file.info}{file.info}}, \code {\LinkA{file.access}{file.... ! Undefined control sequence. l.20319 ...kA{file.info}{file.info}}, \code{\LinkA {file.access}{file.access}} ! Undefined control sequence. l.20320 and \code {\LinkA{files}{files}} for many more file handling function... ! Undefined control sequence. l.20320 and \code{\LinkA {files}{files}} for many more file handling function... ! Undefined control sequence. l.20321 \code {\LinkA{file.choose}{file.choose}} ! Undefined control sequence. l.20321 \code{\LinkA {file.choose}{file.choose}} ! Undefined control sequence. l.20324 \code {\LinkA{glob2rx}{glob2rx}} to convert wildcards (as used by sys... ! Undefined control sequence. l.20324 \code{\LinkA {glob2rx}{glob2rx}} to convert wildcards (as used by sys... ! Undefined control sequence. l.20327 \code {\LinkA{Sys.glob}{Sys.glob}} for wildcard expansion on file paths. ! Undefined control sequence. l.20327 \code{\LinkA {Sys.glob}{Sys.glob}} for wildcard expansion on file paths. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20328 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20330 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20331 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.20333 # # Only files starting with a-l or r ! You can't use `macro parameter character #' in horizontal mode. l.20333 ## Only files starting with a-l or r ! You can't use `macro parameter character #' in horizontal mode. l.20334 # # Note that a-l is locale-dependent, but using case-insensitive ! You can't use `macro parameter character #' in horizontal mode. l.20334 ## Note that a-l is locale-dependent, but using case-insensitive ! You can't use `macro parameter character #' in horizontal mode. l.20335 # # matching makes it unambiguous in English locales ! You can't use `macro parameter character #' in horizontal mode. l.20335 ## matching makes it unambiguous in English locales ! Missing $ inserted. $ l.20336 dir("../..", pattern = "^ [a-lr]", full.names = TRUE, ignore.case = T... ! Missing $ inserted. $ l.20337 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20340 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20341 \end{Examples} ! Undefined control sequence. l.20342 \HeaderA {list2env}{From A List, Build or Add To an Environment}{list... ! Undefined control sequence. l.20343 \keyword {data}{list2env} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20345 \begin{Description} \relax ! Undefined control sequence. l.20346 From a \emph{named} \code {\LinkA{list}{list} x}, create an ! Undefined control sequence. l.20346 From a \emph{named} \code{\LinkA {list}{list} x}, create an ! Undefined control sequence. l.20347 \code {\LinkA{environment}{environment}} containing all list componen... ! Undefined control sequence. l.20347 \code{\LinkA {environment}{environment}} containing all list componen... ! Undefined control sequence. l.20348 ``multi-assign'' from \code {x} into a pre-existing environment. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20349 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20351 \begin{Usage} Underfull \hbox (badness 1383) in paragraph at lines 20338--20352 []\OT1/cmr/m/n/10 list.dirs(R.home("doc")) list.dirs(R.home("doc"), full.names = FALSE) ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20356 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20358 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20359 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20360 \item[\code{x}] a \code{\LinkA{list}{list}}, where \code{\LinkA{name... ! Undefined control sequence. l.20360 \item[\code{x}] a \code {\LinkA{list}{list}}, where \code{\LinkA{name... ! Undefined control sequence. l.20360 \item[\code{x}] a \code{\LinkA {list}{list}}, where \code{\LinkA{name... ! Undefined control sequence. l.20360 ... \code{\LinkA{list}{list}}, where \code {\LinkA{names}{names}(x)} ... ! Undefined control sequence. l.20360 ...\LinkA{list}{list}}, where \code{\LinkA {names}{names}(x)} must ! Undefined control sequence. l.20361 not contain empty (\code {""}) elements. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20362 \item[\code{envir}] an \code{\LinkA{environment}{environment}} or \c... ! Undefined control sequence. l.20362 \item[\code{envir}] an \code {\LinkA{environment}{environment}} or \c... ! Undefined control sequence. l.20362 \item[\code{envir}] an \code{\LinkA {environment}{environment}} or \c... ! Undefined control sequence. l.20362 ...nkA{environment}{environment}} or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20363 \item[\code{parent}] (for the case \code{envir = NULL}): a parent fr... ! Undefined control sequence. l.20363 \item[\code{parent}] (for the case \code {envir = NULL}): a parent fr... ! Undefined control sequence. l.20364 enclosing environment, see \code {\LinkA{new.env}{new.env}}. ! Undefined control sequence. l.20364 enclosing environment, see \code{\LinkA {new.env}{new.env}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20365 \item[\code{hash}] (for the case \code{envir = NULL}): logical indic... ! Undefined control sequence. l.20365 \item[\code{hash}] (for the case \code {envir = NULL}): logical indic... ! Undefined control sequence. l.20366 ...vironment should use hashing, see \code {\LinkA{new.env}{new.env}}. ! Undefined control sequence. l.20366 ...nt should use hashing, see \code{\LinkA {new.env}{new.env}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20367 \item[\code{size}] (in the case \code{envir = NULL, hash = TRUE}): h... ! Undefined control sequence. l.20367 \item[\code{size}] (in the case \code {envir = NULL, hash = TRUE}): h... ! Undefined control sequence. l.20368 see \code {\LinkA{new.env}{new.env}}. ! Undefined control sequence. l.20368 see \code{\LinkA {new.env}{new.env}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20369 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20370 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20372 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20379 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20381 \begin{Value} ! Undefined control sequence. l.20382 An \code {\LinkA{environment}{environment}}, either newly created (as by ! Undefined control sequence. l.20382 An \code{\LinkA {environment}{environment}}, either newly created (as by ! Undefined control sequence. l.20383 \code {\LinkA{new.env}{new.env}}) if the \code{envir} argument was \c... ! Undefined control sequence. l.20383 \code{\LinkA {new.env}{new.env}}) if the \code{envir} argument was \c... ! Undefined control sequence. l.20383 ...\LinkA{new.env}{new.env}}) if the \code {envir} argument was \code... ! Undefined control sequence. l.20383 ... if the \code{envir} argument was \code {NULL}, ! Undefined control sequence. l.20384 otherwise the updated environment \code {envir}. Since environments ! Undefined control sequence. l.20385 are never duplicated, the argument \code {envir} is also changed. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20386 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20388 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Typ [177}]e H for immediate help. ... l.20390 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20392 \begin{SeeAlso} \relax ! Undefined control sequence. l.20393 \code {\LinkA{environment}{environment}}, \code{\LinkA{new.env}{new.e... ! Undefined control sequence. l.20393 \code{\LinkA {environment}{environment}}, \code{\LinkA{new.env}{new.e... ! Undefined control sequence. l.20393 ...LinkA{environment}{environment}}, \code {\LinkA{new.env}{new.env}}, ! Undefined control sequence. l.20393 ...nvironment}{environment}}, \code{\LinkA {new.env}{new.env}}, ! Undefined control sequence. l.20394 \code {\LinkA{as.environment}{as.environment}}; further, \code{\LinkA... ! Undefined control sequence. l.20394 \code{\LinkA {as.environment}{as.environment}}; further, \code{\LinkA... ! Undefined control sequence. l.20394 ...nment}{as.environment}}; further, \code {\LinkA{assign}{assign}}. ! Undefined control sequence. l.20394 ...as.environment}}; further, \code{\LinkA {assign}{assign}}. [200 [2] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toc] ! Undefined control sequence. l.20396 The (semantical) ``inverse'': \code {\LinkA{as.list.environment}{as.l... ! Undefined control sequence. l.20396 The (semantical) ``inverse'': \code{\LinkA {as.list.environment}{as.l... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20397 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20399 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20400 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.20405 identical(L$b, e$b)) # "$" working for environments as for... ! Missing $ inserted. $ l.20406 Underfull \hbox (badness 1014) in paragraph at lines 20396--20406 \OT1/cmr/m/n/10 e <- list2env(L) ls(e) stopifnot(ls(e) == sort(names(L)), ident ical(L$\OML/cmm/m/it/10 b; e$\OT1/cmr/m/n/10 b)) ! You can't use `macro parameter character #' in vertical mode. l.20407 # # consistency, when we do the inverse: ! You can't use `macro parameter character #' in vertical mode. l.20407 ## consistency, when we do the inverse: ! You can't use `macro parameter character #' in horizontal mode. l.20408 ll <- as.list(e) # -> dispatching to the as.list.environment() method ! You can't use `macro parameter character #' in horizontal mode. l.20409 rbind(names(L), names(ll)) # not in the same order, typically, ! You can't use `macro parameter character #' in horizontal mode. l.20410 # but the same content: ! You can't use `macro parameter character #' in vertical mode. l.20414 # # now add to e -- can be seen as a fast "multi-assign": ! You can't use `macro parameter character #' in vertical mode. l.20414 ## now add to e -- can be seen as a fast "multi-assign": ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20419 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20420 \end{Examples} ! Undefined control sequence. l.20421 \HeaderA {load}{Reload Saved Datasets}{load} ! Undefined control sequence. l.20422 \keyword {file}{load} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20424 \begin{Description} \relax ! Undefined control sequence. l.20425 ...atasets written with the function \code {save}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20426 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20428 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20432 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20434 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20435 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20436 \item[\code{file}] a (readable binary-mode) \LinkA{connection}{conne... ! Undefined control sequence. l.20436 ...{file}] a (readable binary-mode) \LinkA {connection}{connection} o... ! Undefined control sequence. l.20437 ...e name of the file to load (when \LinkA {tilde expansion}{tilde ex... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20439 \item[\code{envir}] the environment where the data should be loaded. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20440 \item[\code{verbose}] should item names be printed during loading? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20441 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20442 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20444 \begin{Details} \relax ! Undefined control sequence. l.20445 \code {load} can load \R{} objects saved in the current or any earlier ! Undefined control sequence. l.20445 \code{load} can load \R {} objects saved in the current or any earlier ! Undefined control sequence. l.20446 ...t can read a compressed file (see \code {\LinkA{save}{save}}) ! Undefined control sequence. l.20446 ...ead a compressed file (see \code{\LinkA {save}{save}}) ! Undefined control sequence. l.20448 to \code {\LinkA{url}{url}}). ! Undefined control sequence. l.20448 to \code{\LinkA {url}{url}}). ! Undefined control sequence. l.20450 ...connection will be opened in mode \code {"rb"} and closed ! Undefined control sequence. l.20451 ...use. Any connection other than a \code {\LinkA{gzfile}{gzfile}} or ! Undefined control sequence. l.20451 ...ny connection other than a \code{\LinkA {gzfile}{gzfile}} or ! Undefined control sequence. l.20452 \code {\LinkA{gzcon}{gzcon}} connection will be wrapped in \code{\Lin... ! Undefined control sequence. l.20452 \code{\LinkA {gzcon}{gzcon}} connection will be wrapped in \code{\Lin... ! Undefined control sequence. l.20452 ...n}} connection will be wrapped in \code {\LinkA{gzcon}{gzcon}} ! Undefined control sequence. l.20452 ...nection will be wrapped in \code{\LinkA {gzcon}{gzcon}} ! Undefined control sequence. l.20457 Only \R {} objects saved in the current format (used since \R{} 1.4.0) ! Undefined control sequence. l.20457 ...ed in the current format (used since \R {} 1.4.0) ! Undefined control sequence. l.20463 `magic number': magic numbers \code {1971:1977} are from \R{} < ! Undefined control sequence. l.20463 ...ic numbers \code{1971:1977} are from \R {} < ! Undefined control sequence. l.20464 0.99.0, and \code {RD[ABX]1} from \R{} 0.99.0 to \R{} 1.3.1. These a... ! Undefined control sequence. l.20464 0.99.0, and \code{RD[ABX]1} from \R {} 0.99.0 to \R{} 1.3.1. These a... ! Undefined control sequence. l.20464 ... \code{RD[ABX]1} from \R{} 0.99.0 to \R {} 1.3.1. These are all ! Undefined control sequence. l.20468 The \code {verbose} argument is mainly intended for debugging. If it ! Undefined control sequence. l.20469 is \code {TRUE}, then as objects from the file are loaded, their ! Undefined control sequence. l.20470 ...ll be printed to the console. If \code {verbose} is set to ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20480 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20482 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20484 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20486 \begin{Section} {Warning} ! Undefined control sequence. l.20487 Saved \R {} objects are binary files, even those saved with ! Undefined control sequence. l.20488 \code {ascii = TRUE}, so ensure that they are transferred without ! Undefined control sequence. l.20489 conversion of end of line markers. \code {load} tries to detect such a ! Undefined control sequence. l.20492 \code {load()} replaces all existing objects with the same names [201]] [-1 ! Undefined control sequence. l.20494 \code {\LinkA{.GlobalEnv}{.GlobalEnv}}) and hence potentially overwri... ! Undefined control sequence. l.20494 \code{\LinkA {.GlobalEnv}{.GlobalEnv}}) and hence potentially overwri... ! Undefined control sequence. l.20495 It is considerably safer to use \code {envir = } to load into a ! Undefined control sequence. l.20496 different environment, or to \code {\LinkA{attach}{attach}(file)} which ! Undefined control sequence. l.20496 different environment, or to \code{\LinkA {attach}{attach}(file)} which ! Undefined control sequence. l.20497 \code {load()}s into a new entry in the \code{\LinkA{search}{search}}... ! Undefined control sequence. l.20497 ...{load()}s into a new entry in the \code {\LinkA{search}{search}} p... ! Undefined control sequence. l.20497 ...}s into a new entry in the \code{\LinkA {search}{search}} path. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20498 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20500 \begin{SeeAlso} \relax ! Undefined control sequence. l.20501 \code {\LinkA{save}{save}}, \code{\LinkA{download.file}{download.file... ! Undefined control sequence. l.20501 \code{\LinkA {save}{save}}, \code{\LinkA{download.file}{download.file... ! Undefined control sequence. l.20501 \code{\LinkA{save}{save}}, \code {\LinkA{download.file}{download.file... ! Undefined control sequence. l.20501 \code{\LinkA{save}{save}}, \code{\LinkA {download.file}{download.file... ! Undefined control sequence. l.20502 \code {\LinkA{attach}{attach}} as wrapper for \code{load()}. ! Undefined control sequence. l.20502 \code{\LinkA {attach}{attach}} as wrapper for \code{load()}. ! Undefined control sequence. l.20502 ...A{attach}{attach}} as wrapper for \code {load()}. ! Undefined control sequence. l.20505 \code {\LinkA{unserialize}{unserialize}} and \code{\LinkA{readRDS}{re... ! Undefined control sequence. l.20505 \code{\LinkA {unserialize}{unserialize}} and \code{\LinkA{readRDS}{re... ! Undefined control sequence. l.20505 ...kA{unserialize}{unserialize}} and \code {\LinkA{readRDS}{readRDS}}. ! Undefined control sequence. l.20505 ...rialize}{unserialize}} and \code{\LinkA {readRDS}{readRDS}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20506 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20508 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20509 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.20510 # # save all data ! You can't use `macro parameter character #' in horizontal mode. l.20510 ## save all data ! You can't use `macro parameter character #' in horizontal mode. l.20511 xx <- pi # to ensure there is some data ! You can't use `macro parameter character #' in vertical mode. l.20515 # # restore the saved values to the current environment ! You can't use `macro parameter character #' in vertical mode. l.20515 ## restore the saved values to the current environment ! You can't use `macro parameter character #' in horizontal mode. l.20522 # # restore the saved values to the user's workspace ! You can't use `macro parameter character #' in horizontal mode. l.20522 ## restore the saved values to the user's workspace ! You can't use `macro parameter character #' in horizontal mode. l.20523 load("all.RData") # # which is here *equivalent* to ! You can't use `macro parameter character #' in horizontal mode. l.20523 load("all.RData") ## which is here *equivalent* to ! You can't use `macro parameter character #' in horizontal mode. l.20524 # # load("all.RData", .GlobalEnv) ! You can't use `macro parameter character #' in horizontal mode. l.20524 ## load("all.RData", .GlobalEnv) ! You can't use `macro parameter character #' in horizontal mode. l.20525 # # This however annihilates all objects in .GlobalEnv with the same ... ! You can't use `macro parameter character #' in horizontal mode. l.20525 ## This however annihilates all objects in .GlobalEnv with the same ... ! You can't use `macro parameter character #' in horizontal mode. l.20526 xx # no longer exp(1:3) ! You can't use `macro parameter character #' in horizontal mode. l.20528 attach("all.RData") # safer and will warn about masked objects w/ sa... ! You can't use `macro parameter character #' in horizontal mode. l.20530 # # also typically need to cleanup the search path: ! You can't use `macro parameter character #' in horizontal mode. l.20530 ## also typically need to cleanup the search path: Underfull \hbox (badness 2753) in paragraph at lines 20521--20532 []\OT1/cmr/m/n/10 xx <- exp(1:3) re-store the saved val-ues to the user's work space ! You can't use `macro parameter character #' in vertical mode. l.20533 # # clean up (the example): ! You can't use `macro parameter character #' in vertical mode. l.20533 ## clean up (the example): ! You can't use `macro parameter character #' in vertical mode. l.20536 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.20536 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.20538 # # print the value to see what objects were created. ! You can't use `macro parameter character #' in horizontal mode. l.20538 ## print the value to see what objects were created. ! You can't use `macro parameter character #' in horizontal mode. l.20540 close(con) # url() always opens the connection ! You can't use `macro parameter character #' in vertical mode. l.20542 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.20542 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20543 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20544 \end{Examples} ! Undefined control sequence. l.20545 \HeaderA {locales}{Query or Set Aspects of the Locale}{locales} ! Undefined control sequence. l.20546 \aliasA {LC\_ALL}{locales}{LC.Rul.ALL} ! Undefined control sequence. l.20547 \aliasA {LC\_COLLATE}{locales}{LC.Rul.COLLATE} ! Undefined control sequence. l.20548 \aliasA {LC\_CTYPE}{locales}{LC.Rul.CTYPE} ! Undefined control sequence. l.20549 \aliasA {LC\_MEASUREMENT}{locales}{LC.Rul.MEASUREMENT} ! Undefined control sequence. l.20550 \aliasA {LC\_MESSAGES}{locales}{LC.Rul.MESSAGES} ! Undefined control sequence. l.20551 \aliasA {LC\_MONETARY}{locales}{LC.Rul.MONETARY} ! Undefined control sequence. l.20552 \aliasA {LC\_NUMERIC}{locales}{LC.Rul.NUMERIC} ! Undefined control sequence. l.20553 \aliasA {LC\_PAPER}{locales}{LC.Rul.PAPER} ! Undefined control sequence. l.20554 \aliasA {LC\_TIME}{locales}{LC.Rul.TIME} ! Undefined control sequence. l.20555 \aliasA {Sys.getlocale}{locales}{Sys.getlocale} ! Undefined control sequence. l.20556 \aliasA {Sys.setlocale}{locales}{Sys.setlocale} ! Undefined control sequence. l.20557 \keyword {utilities}{locales} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20559 \begin{Description} \relax ! Undefined control sequence. l.20560 ...or set aspects of the locale for the \R {} process. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20561 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20563 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 []\OT1/cmr/m/n/10 End(Not run) lo-ca-les-Query or Set As- Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 pects of the Lo-cale-lo-cales LC[]ALLlocalesLC.Rul.ALL Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 LC[]COLLATElocalesLC.Rul.COLLATE LC[]CTYPElocalesLC.Rul.CTYPE Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 LC[]MEASUREMENTlocalesLC.Rul.MEASUREMENT Overfull \hbox (45.50517pt too wide) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 LC[]MESSAGESlocalesLC.Rul.MESSAGES LC[]MONETARYlocalesLC.Rul.MO NETARY Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 LC[]NUMERIClocalesLC.Rul.NUMERIC LC[]PAPERlocalesLC.Rul.PAPER Underfull \hbox (badness 10000) in paragraph at lines 20542--20564 \OT1/cmr/m/n/10 LC[]TIMElocalesLC.Rul.TIME Sys.getlocalelocalesSys.getlocale ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20568 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20570 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20571 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20572 \item[\code{category}] character string. The following categories s... ! Undefined control sequence. l.20573 always be supported: \code {"LC\_ALL"}, \code{"LC\_COLLATE"}, ! Undefined control sequence. l.20573 ...s be supported: \code{"LC\_ALL"}, \code {"LC\_COLLATE"}, ! Undefined control sequence. l.20574 \code {"LC\_CTYPE"}, \code{"LC\_MONETARY"}, \code{"LC\_NUMERIC"} and ! Undefined control sequence. l.20574 \code{"LC\_CTYPE"}, \code {"LC\_MONETARY"}, \code{"LC\_NUMERIC"} and ! Undefined control sequence. l.20574 ...\_CTYPE"}, \code{"LC\_MONETARY"}, \code {"LC\_NUMERIC"} and ! Undefined control sequence. l.20575 \code {"LC\_TIME"}. Some systems (not Windows) will also support ! Undefined control sequence. l.20576 \code {"LC\_MESSAGES"}, \code{"LC\_PAPER"} and \code{"LC\_MEASUREMENT"}. ! Undefined control sequence. l.20576 \code{"LC\_MESSAGES"}, \code {"LC\_PAPER"} and \code{"LC\_MEASUREMENT"}. ! Undefined control sequence. l.20576 ...ESSAGES"}, \code{"LC\_PAPER"} and \code {"LC\_MEASUREMENT"}. Underfull \hbox (badness 5741) in paragraph at lines 20572--20577 []\OT1/cmr/m/n/10 character string. The fol-low-ing cat-e-gories should al-ways be sup- ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20578 \item[\code{locale}] character string. A valid locale name on the s... ! Undefined control sequence. l.20579 use. Normally \code {""} (the default) will pick up the default ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20581 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20582 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20584 \begin{Details} \relax ! Undefined control sequence. l.20586 Initially most aspects of the locale of \R {} are set to \code{"C"} (... ! Undefined control sequence. l.20586 ... of the locale of \R{} are set to \code {"C"} (which ! Undefined control sequence. l.20588 \R {} sets \code{"LC\_CTYPE"} and \code{"LC\_COLLATE"}, which allow the ! Undefined control sequence. l.20588 \R{} sets \code {"LC\_CTYPE"} and \code{"LC\_COLLATE"}, which allow the ! Undefined control sequence. l.20588 \R{} sets \code{"LC\_CTYPE"} and \code {"LC\_COLLATE"}, which ]allow the ! Undefined control sequence. l.20591 \code {\LinkA{sort}{sort}}), \code{"LC\_MONETARY"} (for use by ! Undefined control sequence. l.20591 \code{\LinkA {sort}{sort}}), \code{"LC\_MONETARY"} (for use by ! Undefined control sequence. l.20591 \code{\LinkA{sort}{sort}}), \code {"LC\_MONETARY"} (for use by ! Undefined control sequence. l.20592 \code {\LinkA{Sys.localeconv}{Sys.localeconv}}) and \code{"LC\_TIME"}... ! Undefined control sequence. l.20592 \code{\LinkA {Sys.localeconv}{Sys.localeconv}}) and \code{"LC\_TIME"}... ! Undefined control sequence. l.20592 ...localeconv}{Sys.localeconv}}) and \code {"LC\_TIME"} may affect ! Undefined control sequence. l.20593 the behaviour of \code {\LinkA{as.POSIXlt}{as.POSIXlt}} and \code{\Li... ! Undefined control sequence. l.20593 the behaviour of \code{\LinkA {as.POSIXlt}{as.POSIXlt}} and \code{\Li... ! Undefined control sequence. l.20593 ...inkA{as.POSIXlt}{as.POSIXlt}} and \code {\LinkA{strptime}{strptime}} ! Undefined control sequence. l.20593 ....POSIXlt}{as.POSIXlt}} and \code{\LinkA {strptime}{strptime}} ! Undefined control sequence. l.20594 ...functions which use them (but not \code {\LinkA{date}{date}}). ! Undefined control sequence. l.20594 ...ns which use them (but not \code{\LinkA {date}{date}}). ! Undefined control sequence. l.20597 POSIX. \code {"LC\_MESSAGES"} will be \code{"C"} on systems that do not ! Undefined control sequence. l.20597 ...X. \code{"LC\_MESSAGES"} will be \code {"C"} on systems that do not ! Undefined control sequence. l.20599 ...upported category is an error for \code {Sys.setlocale}. [202] ! Undefined control sequence. l.20601 Note that setting category \code {"LC\_ALL"} sets only categories ! Undefined control sequence. l.20602 \code {"LC\_COLLATE"}, \code{"LC\_CTYPE"}, \code{"LC\_MONETARY"} and ! Undefined control sequence. l.20602 \code{"LC\_COLLATE"}, \code {"LC\_CTYPE"}, \code{"LC\_MONETARY"} and ! Undefined control sequence. l.20602 ...C\_COLLATE"}, \code{"LC\_CTYPE"}, \code {"LC\_MONETARY"} and ! Undefined control sequence. l.20603 \code {"LC\_TIME"}. ! Undefined control sequence. l.20609 \code {Sys.setlocale("LC\_CTYPE", )}, if that implies a different ! Undefined control sequence. l.20613 Note that the \env {LANGUAGE} environment variable has precedence over ! Undefined control sequence. l.20614 \code {"LC\_MESSAGES"} in selecting the language for message translation ! Undefined control sequence. l.20615 on most \R {} platforms. ! Undefined control sequence. l.20618 collation can be reset by \code {\LinkA{icuSetCollate}{icuSetCollate}... ! Undefined control sequence. l.20618 collation can be reset by \code{\LinkA {icuSetCollate}{icuSetCollate}... ! Undefined control sequence. l.20619 ...initial setting is taken from the \code {"LC\_COLLATE"} ! Undefined control sequence. l.20621 \code {Sys.setlocale}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20622 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20624 \begin{Value} ! Undefined control sequence. l.20626 setting for \code {Sys.setlocale}), or an empty character string if the ! Undefined control sequence. l.20627 ...nt locale settings are invalid or \code {NULL} if locale ! Undefined control sequence. l.20630 For \code {category = "LC\_ALL"} the details of the string are ! Undefined control sequence. l.20632 names separated by \code {"/"} (Solaris, macOS) or \code{";"} ! Undefined control sequence. l.20632 ...by \code{"/"} (Solaris, macOS) or \code {";"} ! Undefined control sequence. l.20635 \code {foo <- Sys.getlocale()} can be used in ! Undefined control sequence. l.20636 \code {Sys.setlocale("LC\_ALL", locale = foo)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20637 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20639 \begin{Section} {Warning} ! Undefined control sequence. l.20640 Setting \code {"LC\_NUMERIC"} to any value other than \code{"C"} may ! Undefined control sequence. l.20640 ...NUMERIC"} to any value other than \code {"C"} may ! Undefined control sequence. l.20641 cause \R {} to function anomalously, so gives a warning. Input ! Undefined control sequence. l.20642 conver)sions in \R {} itself are unaffected, but the reading and writing ! Undefined control sequence. l.20643 of ASCII \code {\LinkA{save}{save}} files will be, as may packages wh... ! Undefined control sequence. l.20643 of ASCII \code{\LinkA {save}{save}} files will be, as may packages wh... ! Undefined control sequence. l.20647 output may work well enough, but \code {\LinkA{options}{options}(OutD... ! Undefined control sequence. l.20647 ... may work well enough, but \code{\LinkA {options}{options}(OutDec)... ! Undefined control sequence. l.20650 Almost all the output routines used by \R {} itself under Windows ignore ! Undefined control sequence. l.20651 the setting of \code {"LC\_NUMERIC"} since they make use of the Trio ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20653 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20655 \begin{Note} \relax ! Undefined control sequence. l.20656 ...e values of locale categories whilst \R {} is running ought ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20659 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20661 \begin{SeeAlso} \relax ! Undefined control sequence. l.20662 \code {\LinkA{strptime}{strptime}} for uses of \code{category = "LC\_... ! Undefined control sequence. l.20662 \code{\LinkA {strptime}{strptime}} for uses of \code{category = "LC\_... ! Undefined control sequence. l.20662 ...{strptime}{strptime}} for uses of \code {category = "LC\_TIME"}. ! Undefined control sequence. l.20663 \code {\LinkA{Sys.localeconv}{Sys.localeconv}} for details of numeric... ! Undefined control sequence. l.20663 \code{\LinkA {Sys.localeconv}{Sys.localeconv}} for details of numeric... ! Undefined control sequence. l.20666 \code {\LinkA{l10n\_info}{l10n.Rul.info}} gives some summary facts ab... ! Undefined control sequence. l.20666 \code{\LinkA {l10n\_info}{l10n.Rul.info}} gives some summary facts ab... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20671 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20673 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20674 \begin{ExampleCode} ! Missing $ inserted. $ l.20676 Sys.getlocale("LC_ TIME") ! You can't use `macro parameter character #' in math mode. l.20677 # # Not run: ! You can't use `macro parameter character #' in math mode. l.20677 ## Not run: ! You can't use `macro parameter character #' in math mode. l.20678 Sys.setlocale("LC_TIME", "de") # Solaris: details are OS-dependent ! You can't use `macro parameter character #' in math mode. l.20679 Sys.setlocale("LC_TIME", "de_DE") # Many Unix-alikes ! You can't use `macro parameter character #' in math mode. l.20680 Sys.setlocale("LC_TIME", "de_DE.UTF-8") # Linux, macOS, other Unix-... ! You can't use `macro parameter character #' in math mode. l.20681 Sys.setlocale("LC_TIME", "de_DE.utf8") # some Linux versions ! You can't use `macro parameter character #' in math mode. l.20682 Sys.setlocale("LC_TIME", "German") # Windows ! Missing $ inserted. $ l.20683 Underfull \hbox (badness 1694) in paragraph at lines 20669--20683 \OML/cmm/m/it/10 detailsareOS \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 dependentSy s:setlocale\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 LC[]IME\OT1/cmr/m/n/10 "\OML/cmm/ m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 de[]E\OT1/cmr/m/n/10 ")\OML/cmm/m/i t/10 ManyUnix \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 10000) in paragraph at lines 20669--20683 \OML/cmm/m/it/10 alikesSys:setlocale\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 LC[]IME\ OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 de[]E:UTF \OMS/cmsy/m/n/10 ^^@ Overfull \hbox (304.73918pt too wide) in paragraph at lines 20669--20683 \OT1/cmr/m/n/10 8")\OML/cmm/m/it/10 Linux; macOS; otherUnix \OMS/cmsy/m/n/10 ^^ @ \OML/cmm/m/it/10 alikesSys:setlocale\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 LC[]IM E\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 de[]E:ut f\OT1/cmr/m/n/10 8")\OML/cmm/m/it/10 someLinuxversionsSys:setlocale\OT1/cmr/m/n /10 ("\OML/cmm/m/it/10 LC[]IME\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/ 10 "\OML/cmm/m/it/10 German\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 Windows$ ! You can't use `macro parameter character #' in vertical mode. l.20684 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.20684 ## End(Not run) ! Missing $ inserted. $ l.20685 Sys.getlocale("LC_ PAPER") # may or may not be set ! You can't use `macro parameter character #' in math mode. l.20685 Sys.getlocale("LC_PAPER") # may or may not be set ! Missing $ inserted. $ l.20686 ! You can't use `macro parameter character #' in vertical mode. l.20687 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.20687 ## Not run: ! Missing $ inserted. $ l.20688 Sys.setlocale("LC_ COLLATE", "C") # turn off locale-specific sorting, ! You can't use `macro parameter character #' in math mode. l.20688 Sys.setlocale("LC_COLLATE", "C") # turn off locale-specific sorting, ! You can't use `macro parameter character #' in math mode. l.20689 # usually (but not on all platforms) ! You can't use `macro parameter character #' in math mode. l.20690 # # End(Not run) ! You can't use `macro parameter character #' in math mode. l.20690 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help [-2. ... l.20691 \end{ExampleCode} ! Missing $ inserted. $ l.20691 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20692 \end{Examples} ! Undefined control sequence. l.20693 \HeaderA {log}{Logarithms and Exponentials}{log} ! Undefined control sequence. l.20694 \aliasA {exp}{log}{exp} ! Undefined control sequence. l.20695 \aliasA {expm1}{log}{expm1} ! Undefined control sequence. l.20696 \aliasA {log10}{log}{log10} ! Undefined control sequence. l.20697 \aliasA {log1p}{log}{log1p} ! Undefined control sequence. l.20698 \aliasA {log2}{log}{log2} ! Undefined control sequence. l.20699 \aliasA {logb}{log}{logb} ! Undefined control sequence. l.20700 \keyword {math}{log} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20702 \begin{Description} \relax ! Undefined control sequence. l.20703 \code {log} computes logarithms, by default natural logarithms, ! Undefined control sequence. l.20704 \code {log10} computes common (i.e., base 10) logarithms, and ! Undefined control sequence. l.20705 \code {log2} computes binary (i.e., base 2) logarithms. ! Undefined control sequence. l.20706 The general form \code {log(x, base)} computes logarithms with base ! Undefined control sequence. l.20707 \code {base}. Underfull \hbox (badness 10000) in paragraph at lines 20687--20708 []\OT1/cmr/m/n/10 Not run: Sys.setlocale("LC$[]\OML/cmm/m/it/10 OLLATE\OT1/cmr/ m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 C\OT1/cmr/m/n/10 " )\OML/cmm/m/it/10 turnofflocale \OMS/cmsy/m/n/10 ^^@ [203 (Concept index) [178] ! Undefined control sequence. l.20709 \code {log1p(x)} computes \eqn{\log(1+x)}{} accurately also for ! Undefined control sequence. l.20709 \code{log1p(x)} computes \eqn {\log(1+x)}{} accurately also for ! Missing $ inserted. $ l.20709 \code{log1p(x)} computes \eqn{\log (1+x)}{} accurately also for ! Extra }, or forgotten $. l.20709 \code{log1p(x)} computes \eqn{\log(1+x)} {} accurately also for ! Undefined control sequence. l.20710 \eqn {|x| \ll 1}{}. ! Missing $ inserted. $ l.20711 ! Undefined control sequence. l.20712 \code {exp} computes the exponential function. ! Undefined control sequence. l.20714 \code {expm1(x)} computes \eqn{\exp(x) - 1}{} accurately also for ! Undefined control sequence. l.20714 \code{expm1(x)} computes \eqn {\exp(x) - 1}{} accurately also for ! Missing $ inserted. $ l.20714 \code{expm1(x)} computes \eqn{\exp (x) - 1}{} accurately also for ! Extra }, or forgotten $. l.20714 \code{expm1(x)} computes \eqn{\exp(x) - 1} {} accurately also for ! Undefined control sequence. l.20715 \eqn {|x| \ll 1}{}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20716 \end{Description} ! Missing $ inserted. $ l.20716 \end{Description} ! Missing } inserted. } l.20716 \end{Description} ! Missing } inserted. } l.20716 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20718 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20730 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20732 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20733 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20734 \item[\code{x}] a numeric or complex vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20735 \item[\code{base}] a positive or complex number: the base with respe... ! Undefined control sequence. l.20736 logarithms are computed. Defaults to \eqn ] {e}{}=\code{exp(1)}. ! Undefined control sequence. l.20736 ... computed. Defaults to \eqn{e}{}=\code {exp(1)}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20738 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20739 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20741 \begin{Details} \relax ! Undefined control sequence. l.20742 All except \code {logb} are generic functions: methods can be defined ! Undefined control sequence. l.20743 for them individually or via the \code {\LinkA{Math}{S3groupGeneric}} ! Undefined control sequence. l.20743 ...em individually or via the \code{\LinkA {Math}{S3groupGeneric}} ! Undefined control sequence. l.20746 \code {log10} and \code{log2} are only convenience wrappers, but logs ! Undefined control sequence. l.20746 \code{log10} and \code {log2} are only convenience wrappers, but logs ! Undefined control sequence. l.20747 ...nd 2 (whether computed \emph{via} \code {log} or the wrappers) ! Undefined control sequence. l.20750 \code {log} will be used). ! Undefined control sequence. l.20752 \code {logb} is a wrapper for \code{log} for compatibility with S. If ! Undefined control sequence. l.20752 \code{logb} is a wrapper for \code {log} for compatibility with S. If ! Undefined control sequence. l.20753 (S3 or S4) methods are set for \code {log} they will be dispatched. ! Undefined control sequence. l.20754 Do not set S4 methods on \code {logb} itself. ! Undefined control sequence. l.20756 All except \code {log} are \LinkA{primitive}{primitive} functions. ! Undefined control sequence. l.20756 All except \code{log} are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20757 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20759 \begin{Value} ! Undefined control sequence. l.20760 A vector of the same length as \code {x} containing the transformed ! Undefined control sequence. l.20761 values. \code {log(0)} gives \code{-Inf}, and \code{log(x)} for ! Undefined control sequence. l.20761 values. \code{log(0)} gives \code {-Inf}, and \code{log(x)} for ! Undefined control sequence. l.20761 ...de{log(0)} gives \code{-Inf}, and \code {log(x)} for ! Undefined control sequence. l.20762 negative values of \code {x} is \code{NaN}. \code{exp(-Inf)} is \cod... ! Undefined control sequence. l.20762 negative values of \code{x} is \code {NaN}. \code{exp(-Inf)} is \cod... ! Undefined control sequence. l.20762 ...alues of \code{x} is \code{NaN}. \code {exp(-Inf)} is \code{0}. ! Undefined control sequence. l.20762 ... \code{NaN}. \code{exp(-Inf)} is \code {0}. ! Undefined control sequence. l.20765 with imaginary part in the range \eqn {[-\pi, \pi]}{}: which ! Missing $ inserted. $ l.20765 ... imaginary part in the range \eqn{[-\pi , \pi]}{}: which ! Extra }, or forgotten $. l.20765 ...ary part in the range \eqn{[-\pi, \pi]} {}: which ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20767 \end{Value} ! Missing $ inserted. $ l.20767 \end{Value} ! Missing } inserted. } l.20767 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20769 \begin{Section} {S4 methods} ! Undefined control sequence. l.20770 \code {exp}, \code{expm1}, \code{log}, \code{log10}, \code{log2} and ! Undefined control sequence. l.20770 \code{exp}, \code {expm1}, \code{log}, \code{log10}, \code{log2} and ! Undefined control sequence. l.20770 \code{exp}, \code{expm1}, \code {log}, \code{log10}, \code{log2} and ! Undefined control sequence. l.20770 ...e{exp}, \code{expm1}, \code{log}, \code {log10}, \code{log2} and ! Undefined control sequence. l.20770 ...expm1}, \code{log}, \code{log10}, \code {log2} and ! Undefined control sequence. l.20771 \code {log1p} are S4 generic and are members of the ! Undefined control sequence. l.20772 \code {\LinkA{Math}{S4groupGeneric}} group generic. ! Undefined control sequence. l.20772 \code{\LinkA {Math}{S4groupGeneric}} group generic. Underfull \hbox (badness 10000) in paragraph at lines 20764--20773 []\OT1/cmr/m/n/10 For com-plex in-puts to the log func-tions, the value is a Underfull \hbox (badness 10000) in paragraph at lines 20764--20773 \OT1/cmr/m/n/10 com-plex num-ber with imag-i-nary part in the range [-$\OML/cmm /m/it/10 ^^Y; ^^Y\OT1/cmr/m/n/10 ][] : Underfull \hbox (badness 1997) in paragraph at lines 20764--20773 \OML/cmm/m/it/10 whichendoftherangeisusedmightbeplatform \OMS/cmsy/m/n/10 ^^@ \ OML/cmm/m/it/10 specific:$ \OT1/cmr/m/n/10 S4 meth-ods exp, ! Undefined control sequence. l.20774 ...his means that the S4 generic for \code {log} has a ! Undefined control sequence. l.20775 signature with only one argument, \code {x}, but that \code{base} can ! Undefined control sequence. l.20775 ... one argument, \code{x}, but that \code {base} can ! Undefined control sequence. l.20777 ... if you only set a method for the \code {Math} group ! Undefined control sequence. l.20778 generic then \code {base} argument of \code{log} will be ignored for ! Undefined control sequence. l.20778 generic then \code{base} argument of \code {log} will be ignored for ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20780 \end{Section} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20782 \begin{Source} \relax ! Undefined control sequence. l.20783 \code {log1p} and \code{expm1} may be taken from the operating system, ! Undefined control sequence. l.20783 \code{log1p} and \code {expm1} may be taken from the operating system, ! Undefined control sequence. l.20785 \code {dlnrel} by W. Fullerton of Los Alamos Scientific Laboratory (see ! Undefined control sequence. l.20786 \url {http://www.netlib.org/slatec/fnlib/dlnrel.f} and (for small x) a ! Undefined control sequence. l.20787 ...e Newton step for the solution of \code {log1p(y) = x} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20789 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20791 \begin{References} \relax ! Undefined control sequence. l.20795 (for \code {log}, \code{log10} and \code{exp}.) ! Undefined control sequence. l.20795 (for \code{log}, \code {log10} and \code{exp}.) ! Undefined control sequence. l.20795 (for \code{log}, \code{log10} and \code {exp}.) ! Undefined control sequence. l.20799 Springer. (for \code {logb}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20800 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20802 \begin{SeeAlso} \relax ! Undefined control sequence. l.20803 \code {\LinkA{Trig}{Trig}}, ! Undefined control sequence. l.20803 \code{\LinkA {Trig}{Trig}}, ! Undefined control sequence. l.20804 \code {\LinkA{sqrt}{sqrt}}, ! Undefined control sequence. l.20804 \code{\LinkA {sqrt}{sqrt}}, ! Undefined control sequence. l.20805 \code {\LinkA{Arithmetic}{Arithmetic}}. ! Undefined control sequence. l.20805 \code{\LinkA {Arithmetic}{Arithmetic}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20806 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20808 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20809 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.20811 log10(1e7) # = 7 ! Missing $ inserted. $ l.20813 x <- 10^ -(1+2*1:9) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20815 \end{ExampleCode} ! Missing $ inserted. $ l.20815 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20816 \end{Examples} ! Undefined control sequence. l.20817 \HeaderA {Logic}{Logical Operators}{Logic} ! Undefined control sequence. l.20818 \aliasA {"!}{Logic}{!} ! Undefined control sequence. l.20819 \aliasA {\&}{Logic}{.Ramp.} ! Undefined control sequence. l.20820 \aliasA {\&\&}{Logic}{.Ramp..Ramp.} ! Undefined control sequence. l.20821 \aliasA {isTRUE}{Logic}{isTRUE} ! Undefined control sequence. l.20822 \aliasA {xor}{Logic}{xor} ! Undefined control sequence. l.20823 \aliasB {"|}{Logic}{|} ! Undefined control sequence. l.20824 \aliasB {"|"|}{Logic}{||} ! Undefined control sequence. l.20825 \keyword {logic}{Logic} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20827 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20829 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20831 \begin{Usage} Underfull \hbox (badness 2799) in paragraph at lines 20813--20832 \OT1/cmr/m/n/10 isTRU-EL-ogi-cisTRUE xor-Log-icxor "|Logic| "|"|Logic|| log-i-c Logic [204]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.cps ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20842 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20844 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20845 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20846 \item[\code{x, y}] raw or logical or `number-like' vectors (i.e., of... ! Undefined control sequence. l.20847 \code {\LinkA{double}{double}} (class \code{\LinkA{numeric}{numeric}}... ! Undefined control sequence. l.20847 \code{\LinkA {double}{double}} (class \code{\LinkA{numeric}{numeric}}... ! Undefined control sequence. l.20847 \code{\LinkA{double}{double}} (class \code {\LinkA{numeric}{numeric}}... ! Undefined control sequence. l.20847 ...kA{double}{double}} (class \code{\LinkA {numeric}{numeric}}), \cod... ! Undefined control sequence. l.20847 ...\code{\LinkA{numeric}{numeric}}), \code {\LinkA{integer}{integer}} ! Undefined control sequence. l.20847 ...LinkA{numeric}{numeric}}), \code{\LinkA {integer}{integer}} ! Undefined control sequence. l.20848 and \code {\LinkA{complex}{complex}})), or objects for ! Undefined control sequence. l.20848 and \code{\LinkA {complex}{complex}})), or objects for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20850 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20851 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20853 \begin{Details} \relax ! Undefined control sequence. l.20854 \code {!} indicates logical negation (NOT). ! Undefined control sequence. l.20856 \code {\&} and \code{\&\&} indicate logical AND and \code{|} and \cod... ! Undefined control sequence. l.20856 \code{\&} and \code {\&\&} indicate logical AND and \code{|} and \cod... ! Undefined control sequence. l.20856 ...de{\&\&} indicate logical AND and \code {|} and \code{||} ! Undefined control sequence. l.20856 ...cate logical AND and \code{|} and \code {||} ! Undefined control sequence. l.20862 preferred in \code {\LinkA{if}{if}} clauses. ! Undefined control sequence. l.208 [-362 preferred in \code{\LinkA {if}{if}} clauses. ! Undefined control sequence. l.20864 \code {xor} indicates elementwise exclusive OR. ! Undefined control sequence. l.20866 \code {isTRUE(x)} is an abbreviation of \code{identical(TRUE, x)}, and ! Undefined control sequence. l.20866 ...{isTRUE(x)} is an abbreviation of \code {identical(TRUE, x)}, and ! Undefined control sequence. l.20867 so is true if and only if \code {x} is a length-one logical vector ! Undefined control sequence. l.20868 whose only element is \code {TRUE} and which has no attributes (not even ! Undefined control sequence. l.20873 handled without any coercion for \code {!}, \code{\&}, \code{|} and ! Undefined control sequence. l.20873 ...ithout any coercion for \code{!}, \code {\&}, \code{|} and ! Undefined control sequence. l.20873 ...coercion for \code{!}, \code{\&}, \code {|} and ! Undefined control sequence. l.20874 \code {xor}, with these operators being applied bitwise (so \code{!} is ! Undefined control sequence. l.20874 ...erators being applied bitwise (so \code {!} is ! Undefined control sequence. l.20877 The operators \code {!}, \code{\&} and \code{|} are generic functions: ! Undefined control sequence. l.20877 The operators \code{!}, \code {\&} and \code{|} are generic functions: ! Undefined control sequence. l.20877 ...operators \code{!}, \code{\&} and \code {|} are generic functions: ! Undefined control sequence. l.20879 \code {\LinkA{Ops}{S3groupGeneric}} (or S4 \code{Logic}, see below) ! Undefined control sequence. l.20879 \code{\LinkA {Ops}{S3groupGeneric}} (or S4 \code{Logic}, see below) ! Undefined control sequence. l.20879 ...inkA{Ops}{S3groupGeneric}} (or S4 \code {Logic}, see below) ! Undefined control sequence. l.20880 group generic function. (See \code {\LinkA{Ops}{S3groupGeneric}} for ! Undefined control sequence. l.20880 group generic function. (See \code{\LinkA {Ops}{S3groupGeneric}} for ! Undefined control sequence. l.20883 \code {\LinkA{NA}{NA}} is a valid logical object. Where a component of ! Undefined control sequence. l.20883 \code{\LinkA {NA}{NA}} is a valid logical object. Where a component of ! Undefined control sequence. l.20884 \code {x} or \code{y} is \code{NA}, the result will be \code{NA} if the ! Undefined control sequence. l.20884 \code{x} or \code {y} is \code{NA}, the result will be \code{NA} if the ! Undefined control sequence. l.20884 \code{x} or \code{y} is \code {NA}, the result will be \code{NA} if the ! Undefined control sequence. l.20884 ... is \code{NA}, the result will be \code {NA} if the ! Undefined control sequence. l.20885 ...ome is ambiguous. In other words \code {NA \& TRUE} evaluates to ! Undefined control sequence. l.20886 \code {NA}, but \code{NA \& FALSE} evaluates to \code{FALSE}. See the ! Undefined control sequence. l.20886 \code{NA}, but \code {NA \& FALSE} evaluates to \code{FALSE}. See the ! Undefined control sequence. l.20886 ...t \code{NA \& FALSE} evaluates to \code {FALSE}. See the ! Undefined control sequence. l.20889 See \LinkA {Syntax}{Syntax} for the precedence of these operators: un... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20893 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20895 \begin{Value} ! Undefined control sequence. l.20896 For \code {!}, a logical or raw vector(for raw \code{x}) of the same ! Undefined control sequence. l.20896 ..., a logical or raw vector(for raw \code {x}) of the same ! Undefined control sequence. l.20897 length as \code {x}: names, dims and dimnames are copied from \code{x}, ! Undefined control sequence. l.20897 ...dims and dimnames are copied from \code {x}, ! Undefined control sequence. l.20900 For \code {|}, \code{\&} and \code{xor} a logical or raw vector. If ! Undefined control sequence. l.20900 For \code{|}, \code {\&} and \code{xor} a logical or raw vector. If ! Undefined control sequence. l.20900 For \code{|}, \code{\&} and \code {xor} a logical or raw vector. If ! Undefined control sequence. l.20903 \code {\LinkA{warning}{warning}} when they are recycled only \emph{fr... ! Undefined control sequence. l.20903 \code{\LinkA {warning}{warning}} when they are recycled only \emph{fr... ! Undefined control sequence. l.20909 ...re compatible, when the class and \code {\LinkA{tsp}{tsp}} ! Undefined control sequence. l.20909 ...atible, when the class and \code{\LinkA {tsp}{tsp}} [205]] ! Undefined control sequence. l.20914 For \code {||}, \code{\&\&} and \code{isTRUE}, a length-one logical v... ! Undefined control sequence. l.20914 For \code{||}, \code {\&\&} and \code{isTRUE}, a length-one logical v... ! Undefined control sequence. l.20914 For \code{||}, \code{\&\&} and \code {isTRUE}, a length-one logical v... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20915 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20917 \begin{Section} {S4 methods} ! Undefined control sequence. l.20918 \code {!}, \code{\&} and \code{|} are S4 generics, the latter two part ! Undefined control sequence. l.20918 \code{!}, \code {\&} and \code{|} are S4 generics, the latter two part ! Undefined control sequence. l.20918 \code{!}, \code{\&} and \code {|} are S4 generics, the latter two part ! Undefined control sequence. l.20919 of the \code {\LinkA{Logic}{S4groupGeneric}} group generic (and ! Undefined control sequence. l.20919 of the \code{\LinkA {Logic}{S4groupGeneric}} group generic (and ! Undefined control sequence. l.20920 hence methods need argument names \code {e1, e2}). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20921 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20923 \begin{Note} \relax ! Undefined control sequence. l.20925 e.g.~\code {`\&`(x, y)}: see the description of how ! Undefined control sequence. l.20926 argument-matching is done in \code {\LinkA{Ops}{Ops}}. ! Undefined control sequence. l.20926 argument-matching is done in \code{\LinkA {Ops}{Ops}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20927 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20929 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20933 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20935 \begin{SeeAlso} \relax ! Undefined control sequence. l.20936 \code {\LinkA{TRUE}{TRUE}} or \code{\LinkA{logical}{logical}}. ! Undefined control sequence. l.20936 \code{\LinkA {TRUE}{TRUE}} or \code{\LinkA{logical}{logical}}. ! Undefined control sequence. l.20936 \code{\LinkA{TRUE}{TRUE}} or \code {\LinkA{logical}{logical}}. ! Undefined control sequence. l.20936 \code{\LinkA{TRUE}{TRUE}} or \code{\LinkA {logical}{logical}}. ! Undefined control sequence. l.20938 \code {\LinkA{any}{any}} and \code{\LinkA{all}{all}} for OR and AND o... ! Undefined control sequence. l.20938 \code{\LinkA {any}{any}} and \code{\LinkA{all}{all}} for OR and AND o... ! Undefined control sequence. l.20938 \code{\LinkA{any}{any}} and \code {\LinkA{all}{all}} for OR and AND o... ! Undefined control sequence. l.20938 \code{\LinkA{any}{any}} and \code{\LinkA {all}{all}} for OR and AND o... ! Undefined control sequence. l.20941 \code {\LinkA{Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.20941 \code{\LinkA {Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.20943 \code {\LinkA{bitwAnd}{bitwAnd}} for bitwise versions for integer vec... ! Undefined control sequence. l.20943 \code{\LinkA {bitwAnd}{bitwAnd}} for bitwise versions for integer vec... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20944 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20946 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20947 \begin{ExampleCode} ! Misplaced alignment tab character &. l.20949 x[(x > 0) & (x < 1)] # all x values between 0 and 1 ! You can't use `macro parameter character #' in horizontal mode. l.20949 x[(x > 0) & (x < 1)] # all x values between 0 and 1 ! You can't use `macro parameter character #' in vertical mode. l.20952 # # construct truth tables : ! You can't use `macro parameter character #' in vertical mode. l.20952 ## construct truth tables : ! Misplaced alignment tab character &. l.20956 outer(x, x, "& ") ## AND table ! You can't use `macro parameter character #' in horizontal mode. l.20956 outer(x, x, "&") # # AND table ! You can't use `macro parameter character #' in horizontal mode. l.20956 outer(x, x, "&") ## AND table ! You can't use `macro parameter character #' in horizontal mode. l.20957 outer(x, x, "|") # # OR table ! You can't use `macro parameter character #' in horizontal mode. l.20957 outer(x, x, "|") ## OR table ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20958 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20959 \end{Examples} ) [-4 ! Undefined control sequence. l.20960 \HeaderA {logical}{Logical Vectors}{logical} ! Undefined control sequence. l.20961 \aliasA {as.logical}{logical}{as.logical} ! Undefined control sequence. l.20962 \methaliasA {as.logical.factor}{logical}{as.logical.factor} ! Undefined control sequence. l.20963 \aliasA {F}{logical}{F} ! Undefined control sequence. l.20964 \aliasA {FALSE}{logical}{FALSE} ! Undefined control sequence. l.20965 \aliasA {is.logical}{logical}{is.logical} ! Undefined control sequence. l.20966 \aliasA {T}{logical}{T} ! Undefined control sequence. l.20967 \aliasA {TRUE}{logical}{TRUE} ! Undefined control sequence. l.20968 \keyword {classes}{logical} ! Undefined control sequence. l.20969 \keyword {logic}{logical} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20971 \begin{Description} \relax ! Undefined control sequence. l.20972 Create or test for objects of type \code {"logical"}, and the basic ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20974 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20976 \begin{Usage} Underfull \hbox (badness 1924) in paragraph at lines 20954--20977 []\OT1/cmr/m/n/10 x <- c(NA, FALSE, TRUE) names(x) <- as.character(x) outer(x, x, Underfull \hbox (badness 2096) in paragraph at lines 20954--20977 \OT1/cmr/m/n/10 "") AND ta-ble outer(x, x, "|") OR ta-ble log-i-cal-Log-i-c al Vec- Underfull \hbox (badness 1142) in paragraph at lines 20954--20977 \OT1/cmr/m/n/10 i-calF FALSE-l-og-i-cal-FALSE is.logicallogicalis.logical Tlog- i-calT TRU-El-og-i-cal- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20986 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20988 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20989 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20990 \item[\code{length}] A non-negative integer specifying the desired l... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20993 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item-- [179] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.tocperhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20994 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20995 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20996 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20998 \begin{Details} \relax ! Undefined control sequence. l.20999 \code {TRUE} and \code{FALSE} are \LinkA{reserved}{reserved} words de... ! Undefined control sequence. l.20999 \code{TRUE} and \code {FALSE} are \LinkA{reserved}{reserved} words de... ! Undefined control sequence. l.20999 \code{TRUE} and \code{FALSE} are \LinkA {reserved}{reserved} words de... ! Undefined control sequence. l.21000 constants in the \R {} language, whereas \code{T} and \code{F} are gl... ! Undefined control sequence. l.21000 ...nts in the \R{} language, whereas \code {T} and \code{F} are global ! Undefined control sequence. l.21000 ...{} language, whereas \code{T} and \code {F} are global ! Undefined control sequence. l.21002 \code {logical(1)} vectors. ! Undefined control sequence. l.21005 numerical value is required, with \code {TRUE} being mapped to ! Undefined control sequence. l.21006 \code {1L}, \code{FALSE} to \code{0L} and \code{NA} to \code{NA\_inte... ! Undefined control sequence. l.21006 \code{1L}, \code {FALSE} to \code{0L} and \code{NA} to \code{NA\_inte... ! Undefined control sequence. l.21006 \code{1L}, \code{FALSE} to \code {0L} and \code{NA} to \code{NA\_inte... ! Undefined control sequence. l.21006 ...L}, \code{FALSE} to \code{0L} and \code {NA} to \code{NA\_integer\_}. ! Undefined control sequence. l.21006 ...SE} to \code{0L} and \code{NA} to \code {NA\_integer\_}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21007 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21009 \begin{Value} ! Undefined control sequence. l.21010 \code {logical} creates a logical vector of the specified length. ! Undefined control sequence. l.21011 ...element of the vector is equal to \code {FALSE}. ! Undefined control sequence. l.21013 \code {as.logical} attempts to coerce its argument to be of logical ! Undefined control sequence. l.21014 type. For \code {\LinkA{factor}{factor}}s, this uses the \code{\Link... ! Undefined control sequence. l.21014 type. For \code{\LinkA {factor}{factor}}s, this uses the \code{\Link... ! Undefined control sequence. l.21014 ...{factor}{factor}}s, this uses the \code {\LinkA{levels}{levels}} ! Undefined control sequence. l.21014 ...}{factor}}s, this uses the \code{\LinkA {levels}{levels}} ! Undefined control sequence. l.21015 (labels). Like \code {\LinkA{as.vector}{as.vector}} it strips attrib... ! Undefined control sequence. l.21015 (labels). Like \code{\LinkA {as.vector}{as.vector}} it strips attrib... ! Undefined control sequence. l.21016 names. Character strings \code {c("T", "TRUE", "True", "true")} are ! Undefined control sequence. l.21017 regarded as true, \code {c("F", "FALSE", "False", "false")} as false, ! Undefined control sequence. l.21018 and all others as \code {NA}. ! Undefined control sequence. l.21020 \code {is.logical} returns \code{TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.21020 \code{is.logical} returns \code {TRUE} or \code{FALSE} depending on ! Undefined control sequence. l.21020 ...s.logical} returns \code{TRUE} or \code {FALSE} depending on ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21022 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21024 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21028 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21030 \begin{SeeAlso} \relax ! Undefined control sequence. l.21031 \code {\LinkA{NA}{NA}}, the other logical constant. ! Undefined control sequence. l.21031 \code{\LinkA {NA}{NA}}, the other logical constant. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21032 \end{SeeAlso} ! Undefined control sequence. l.21033 \HeaderA {LongVectors}{Long Vectors}{LongVectors} ! Undefined control sequence. l.21034 \aliasA {long vector}{LongVectors}{long vector} ! Undefined control sequence. l.21035 \aliasA {Long vectors}{LongVectors}{Long vectors} ! Undefined control sequence. l.21036 \aliasA {long vectors}{LongVectors}{long vectors} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21038 \begin{Description} \relax ! Undefined control sequence. l.21039 Vec) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toctors of \eqn {2^{31}}{} or more elements were added in \R{} 3.0.0. ! Missing $ inserted. $ l.21039 Vectors of \eqn{2^ {31}}{} or more elements were added in \R{} 3.0.0. ! Extra }, or forgotten $. l.21039 Vectors of \eqn{2^{31}} {} or more elements were added in \R{} 3.0.0. ! Undefined control sequence. l.21039 ...1}}{} or more elements were added in \R {} 3.0.0. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21040 \end{Description} ! Missing $ inserted. $ l.21040 \end{Description} ! Missing } inserted. } l.21040 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21042 \begin{Details} \relax ! Undefined control sequence. l.21043 Prior to \R {} 3.0.0, all vectors in \R{} were restricted to at most ! Undefined control sequence. l.21043 Prior to \R{} 3.0.0, all vectors in \R {} were restricted to at most ! Undefined control sequence. l.21044 \eqn {2^{31} - 1}{} elements and could be indexed by integer ! Missing $ inserted. $ l.21044 \eqn{2^ {31} - 1}{} elements and could be indexed by integer ! Extra }, or forgotten $. l.21044 \eqn{2^{31} - 1} {} elements and could be indexed by integer ! Missing $ inserted. $ l.21046 [206] ! Undefined control sequence. l.21047 Currently all \LinkA {atomic}{atomic} (raw, logical, integer, numeric... ! Undefined control sequence. l.21048 character) vectors, \LinkA {list}{list}s and \LinkA{expression}{expre... ! Undefined control sequence. l.21048 ...vectors, \LinkA{list}{list}s and \LinkA {expression}{expression}s ... ! Undefined control sequence. l.21051 structure. In theory up they can to \eqn {2^{52}}{} elements, but ! Missing $ inserted. $ l.21051 ...ture. In theory up they can to \eqn{2^ {52}}{} elements, but ! Extra }, or forgotten $. l.21051 ... In theory up they can to \eqn{2^{52}} {} elements, but ! Undefined control sequence. l.21053 Such objects will have a \LinkA {length}{length} that is expressed as... ! Missing $ inserted. $ l.21055 Underfull \hbox (badness 1540) in paragraph at lines 21047--21055 []\OT1/cmr/m/n/10 Currently all atom-i-catomic (raw, log-i-cal, in-te-ger, nu-m eric, com-plex, Underfull \hbox (badness 1033) in paragraph at lines 21047--21055 \OT1/cmr/m/n/10 have a slightly dif-fer-ent in-ter-nal struc-ture. In the-ory u p they can to Overfull \hbox (433.57904pt too wide) in paragraph at lines 21047--21055 \OT1/cmr/m/n/10 2$[][]\OML/cmm/m/it/10 elements; butaddressspacelimitsofcurrent CPUsandOSeswillbemuchsmaller:Suchobjectswillhavea[][]thatisexpressedasadouble; andcanbeindexedbydoublevectors:$ ! Undefined control sequence. l.21057 of their dimensions is at most \eqn {2^{31} - 1}{}: thus there ! Missing $ inserted. $ l.21057 of their dimensions is at most \eqn{2^ {31} - 1}{}: thus there ! Extra }, or forgotten $. l.21057 ... dimensions is at most \eqn{2^{31} - 1} {}: thus there ! Missing $ inserted. $ l.21059 ! Undefined control sequence. l.21060 \R {} code typically only needs minor changes to work with long vectors, ! Undefined control sequence. l.21061 maybe only checking that \code {as.integer} is not used unnecessarily ! Undefined control sequence. l.21063 extensive changes. Note that the \code {\LinkA{.C}{.C}} and ! Undefined control sequence. l.21063 ...ve changes. Note that the \code{\LinkA {.C}{.C}} and ! Undefined control sequence. l.21064 \code {\LinkA{.Fortran}{.Fortran}} interfaces do not accept long vect... ! Undefined control sequence. l.21064 \code{\LinkA {.Fortran}{.Fortran}} interfaces do not accept long vect... ! Undefined control sequence. l.21065 \code {\LinkA{.Call}{.Call}} (or similar) has to be used. ! Undefined control sequence. l.21065 \code{\LinkA {.Call}{.Call}} (or similar) has to be used. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21073 \end{Details} ! Missing } inserted. } l.21073 \end{Details} ! Missing } inserted. } l.21073 \end{Details} ! Missing } inserted. } l.21073 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.21075 \begin{Section} {Matrix algebra} ! Undefined control sequence. l.21076 It is now possible to use \eqn {m \times n}{} matrices with more ! Missing $ inserted. $ l.21076 It is now possible to use \eqn{m \times n}{} matrices with more ! Extra }, or forgotten $. l.21076 It is now possible to use \eqn{m \times n} {} matrices with more ! Undefined control sequence. l.21078 \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code{\Li... ! Undefined control sequence. l.21078 \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code{\Li... ! Undefined control sequence. l.21078 \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code{\Li... ! Undefined control sequence. l.21078 \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}}, \code{\Li... ! Undefined control sequence. l.21078 ...\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code {\LinkA{crossprod}{crosspr... ! Undefined control sequence. l.21078 ...nt{}}{.Rpcent.*.Rpcent.}}, \code{\LinkA {crossprod}{crossprod}}, \... ! Undefined control sequence. l.21078 ...de{\LinkA{crossprod}{crossprod}}, \code {\LinkA{svd}{svd}}, ! Undefined control sequence. l.21078 ...kA{crossprod}{crossprod}}, \code{\LinkA {svd}{svd}}, ! Undefined control sequence. l.21079 \code {\LinkA{qr}{qr}}, \code{\LinkA{solve}{solve}} and \code{\LinkA{... ! Undefined control sequence. l.21079 \code{\LinkA {qr}{qr}}, \code{\LinkA{solve}{solve}} and \code{\LinkA{... ! Undefined control sequence. l.21079 \code{\LinkA{qr}{qr}}, \code {\LinkA{solve}{solve}} and \code{\LinkA{... ! Undefined control sequence. l.21079 \code{\LinkA{qr}{qr}}, \code{\LinkA {solve}{solve}} and \code{\LinkA{... ! Undefined control sequence. l.21079 ..., \code{\LinkA{solve}{solve}} and \code {\LinkA{eigen}{eigen}} will ! Undefined control sequence. l.21079 ...{\LinkA{solve}{solve}} and \code{\LinkA {eigen}{eigen}} will ! Missing $ inserted. $ l.21082 Underfull \hbox (badness 1087) in paragraph at lines 21067--21082 \OT1/cmr/m/n/10 ef-fi-cient (4 bytes per el-e-ment rather than 8). So it is ex- pected that Overfull \hbox (949.39476pt too wide) in paragraph at lines 21067--21082 \OMS/cmsy/m/n/10 ^^B\OML/cmm/m/it/10 n[]matriceswithmorethan\OT1/cmr/m/n/10 2\O ML/cmm/m/it/10 billionelements:Whethermatrixalgebra\OT1/cmr/m/n/10 (\OML/cmm/m/ it/10 including[]; []; []; []; []and[]willactuallyworkissomewhatimplementationd ependent; includingtheFortrancompilerusedandifanexternalBLASorLAPACKisused:$ ! Undefined control sequence. l.21085 \code {chol} on a 47,000 square matrix took about 5 hours with the ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21088 \end{Section} ! Missing } inserted. } l.21088 \end{Section} ! Undefined control sequence. l.21089 \HeaderA {lower.tri}{Lower and Upper Triangular Part of a Matrix}{low... ! Undefined control sequence. l.21090 \aliasA {upper.tri}{lower.tri}{upper.tri} ! Undefined control sequence. l.21091 \keyword {array}{lower.tri)} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21093 \begin{Description} \relax ! Undefined control sequence. l.21095 entries \code {TRUE} in the lower or upper triangle. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21096 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21098 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21103 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21105 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21106 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21107 \item[\code{x}] a matrix. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21108 \item[\code{diag}] logical. Should the diagonal be included? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21109 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21110 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21112 \begin{SeeAlso} \relax ! Undefined control sequence. l.21113 \code {\LinkA{diag}{diag}}, ! Undefined control sequence. l.21113 \code{\LinkA {diag}{diag}}, ! Undefined control sequence. l.21114 \code {\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.21114 \code{\LinkA {matrix}{matrix}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [180) (Preface) l.21115 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21117 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21118 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21123 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21124 \end{Examples} ! Undefined control sequence. l.21125 \HeaderA {ls}{List Objects}{ls} ! Undefined control sequence. l.21126 \aliasA {objects}{ls}{objects} ! Undefined control sequence. l.21127 \keyword {environment}{ls} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21129 \begin{Description} \relax ! Undefined control sequence. l.21130 \code {ls} and \code{objects} return a vector of character strings ! Undefined control sequence. l.21130 \code{ls} and \code {objects} return a vector of character strings ! Undefined control sequence. l.21132 ...argument at the top level prompt, \code {ls} shows what ! Undefined control sequence. l.21134 argument inside a function, \code {ls} returns the names of the ! Undefined control sequence. l.21136 \code {browser}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21137 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21139 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21146 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21148 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21149 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for imm]ediate help. ... l.21150 \item[\code{name}] which environment to use in listing the available... ! Undefined control sequence. l.21152 \code {name} for back compatibility, in fact this argument can [207 Cross reference values unknown; you must run TeX again. Chapter 1 [1 ) (see the transcript file for additional information) for immediate help. ... l.21154 \item[\code{pos}] an alternative argument to \code{name} for specify... ! Undefined control sequence. l.21154 ...{pos}] an alternative argument to \code {name} for specifying the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21157 \item[\code{envir}] an alternative argument to \code{name} for speci... ! Undefined control sequence. l.21157 ...nvir}] an alternative argument to \code {name} for specifying the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21159 \item[\code{all.names}] a logical value. If \code{TRUE}, all ! Undefined control sequence. l.21159 ...{all.names}] a logical value. If \code {TRUE}, all ! Undefined control sequence. l.21160 object names are returned. If \code {FALSE}, names which begin with a ! Undefined control sequence. l.21161 \samp {.} are omitted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21162 \item[\code{pattern}] an optional \LinkA{regular expression}{regular... ! Undefined control sequence. l.21162 \item[\code{pattern}] an optional \LinkA {regular expression}{regular... ! Undefined control sequence. l.21163 matching \code {pattern} are returned. \code{\LinkA{glob2rx}{glob2rx... ! Undefined control sequence. l.21163 ...ing \code{pattern} are returned. \code {\LinkA{glob2rx}{glob2rx}}... ! Undefined control sequence. l.21163 ...de{pattern} are returned. \code{\LinkA {glob2rx}{glob2rx}} can be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21165 \item[\code{sorted}] logical indicating if the resulting ! Undefined control sequence. l.21166 \code {\LinkA{character}{character}} should be sorted alphabetically.... ! Undefined control sequence. l.21166 \code{\LinkA {character}{character}} should be sorted alphabetically.... ! Undefined control sequence. l.21167 this is part of \code {ls()} may take most of the time. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21168 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2> for immediate help. ... l.21171 \begin{Details} \relax ! Undefined control sequence. l.21172 The \code {name} argument can specify the environment from which ! Undefined control sequence. l.21174 as an integer (the position in the \code {\LinkA{search}{search}} lis... ! Undefined control sequence. l.21174 ...teger (the position in the \code{\LinkA {search}{search}} list); as ! Undefined control sequence. l.21176 explicit \code {\LinkA{environment}{environment}} (including using ! Undefined control sequence. l.21176 explicit \code{\LinkA {environment}{environment}} (including using ! Undefined control sequence. l.21177 \code {\LinkA{sys.frame}{sys.frame}} to access the currently active f... ! Undefined control sequence. l.21177 \code{\LinkA {sys.frame}{sys.frame}} to access the currently active f... ! Undefined control sequence. l.21178 ...t, the environment of the call to \code {ls} or \code{objects} ! Undefined control sequence. l.21178 ...nment of the call to \code{ls} or \code {objects} ! Undefined control sequence. l.21179 is used. The \code {pos} and \code{envir} arguments are an alternative ! Undefined control sequence. l.21179 is used. The \code{pos} and \code {envir} arguments are an alternative ! Undefined control sequence. l.21183 ...t the \emph{order} of strings for \code {sorted = TRUE} is ! Undefined control sequence. l.21184 locale dependent, see \code {\LinkA{Sys.getlocale}{Sys.getlocale}}. ... ! Undefined control sequence. l.21184 locale dependent, see \code{\LinkA {Sys.getlocale}{Sys.getlocale}}. ... ! Undefined control sequence. l.21184 ...s.getlocale}{Sys.getlocale}}. If \code {sorted = ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21187 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21189 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21193 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21195 \begin{SeeAlso} \relax ! Undefined control sequence. l.21196 \code {\LinkA{glob2rx}{glob2rx}} for converting wildcard patterns to ... ! Undefined control sequence. l.21196 \code{\LinkA {glob2rx}{glob2rx}} for converting wildcard patterns to ... ! Undefined control sequence. l.21199 \code {\LinkA{ls.str}{ls.str}} for a long listing based on \code{\Lin... ! Undefined control sequence. l.21199 \code{\LinkA {ls.str}{ls.str}} for a long listing based on \code{\Lin... ! Undefined control sequence. l.21199 ...str}} for a long listing based on \code {\LinkA{str}{str}}. ! Undefined control sequence. l.21199 ...or a long listing based on \code{\LinkA {str}{str}}. ! Undefined control sequence. l.21200 \code {\LinkA{apropos}{apropos}} (or \code{\LinkA{find}{find}}) ! Undefined control sequence. l.21200 \code{\LinkA {apropos}{apropos}} (or \code{\LinkA{find}{find}}) ! Undefined control sequence. l.21200 \code{\LinkA{apropos}{apropos}} (or \code {\LinkA{find}{find}}) ! Undefined control sequence. l.21200 ...nkA{apropos}{apropos}} (or \code{\LinkA {find}{find}}) ! Undefined control sequence. l.21202 \code {\LinkA{grep}{grep}} for more details on `regular expressions'; ! Undefined control sequence. l.21202 \code{\LinkA {grep}{grep}} for more details on `regular expressions'; ! Undefined control sequence. l.21203 \code {\LinkA{class}{class}}, \code{\LinkA{methods}{methods}}, etc., for ! Undefined control sequence. l.21203 \code{\LinkA {class}{class}}, \code{\LinkA{methods}{methods}}, etc., for ! Undefined control sequence. l.21203 \code{\LinkA{class}{class}}, \code {\LinkA{methods}{methods}}, etc., for ! Undefined control sequence. l.21203 \code{\LinkA{class}{class}}, \code{\LinkA {methods}{methods}}, etc., for ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21205 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21207 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21208 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21211 ls(pattern= "O", all.names = TRUE) # also shows ".[foo]" ! You can't use `macro parameter character #' in vertical mode. l.21213 # shows an empty list because inside myfunc no variables are defined ! You can't use `macro parameter character #' in vertical mode. l.21217 # define a local variable inside myfunc ! You can't use `macro parameter character #' in horizontal mode. l.21219 myfunc() # shows "y" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21220 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21221 \end{Examples} ! Undefined control sequence. l.21222 \HeaderA {make.names}{Make Syntactically Valid Names}{make.names} ! Undefined control sequence. l.21223 \keyword {character}{make.names} ! LaTeX Error: Envir> for immediate help. ... l.21225 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21227 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21229 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21233 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21235 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21236 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21237 \item[\code{names}] character vector to be coerced to syntactically ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21239 \item[\code{unique}] logical; if \code{TRUE}, the resulting elements... ! Undefined control sequence. l.21239 \item[\code{unique}] logical; if \code {TRUE}, the resulting elements... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21241 \item[\code{allow\_}] logical. For compatibility with \R{} prior to... ! Undefined control sequence. l.21241 ..._}] logical. For compatibility with \R {} prior to 1.9.0. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21242 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21243 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21245 \begin [2{Details} \relax ! Undefined control sequence. l.21248 by a number. Names such as \code {".2way"} are not valid, and neither ! Undefined control sequence. l.21249 are the \LinkA {reserved}{reserved} words. [208> for immediate help. ... l.21259 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21261 \begin{Value} ! Undefined control sequence. l.21262 A character vector of same length as \code {names} with each changed to ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21264 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21266 \begin{Section} {Warning} ! Undefined control sequence. l.21269 ... including UTF-8 locales). However, \R {} provides ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21271 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21273 \begin{Note} \relax ! Undefined control sequence. l.21274 Prior to \R {} version 1.9.0, underscores were not valid in variable ... ! Undefined control sequence. l.21276 work. Use \code {allow\_ = FALSE} for back-compatibility. ! Undefined control sequence. l.21278 \code {allow\_ = FALSE} is also useful when creating names for export to ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21281 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21283 \begin{SeeAlso} \relax ! Undefined control sequence. l.21284 \code {\LinkA{make.unique}{make.unique}}, ! Undefined control sequence. l.21284 \code{\LinkA {make.unique}{make.unique}}, ! Undefined control sequence. l.21285 \code {\LinkA{names}{names}}, ! Undefined control se> for immediate help. ... l.21288 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21290 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21291 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21293 # "a.and.b" "a.and.b.1" ! Missing $ inserted. $ l.21294 make.names(c("a and b", "a_ and_b"), unique = TRUE) ! You can't use `macro parameter character #' in math mode. l.21295 # "a.and.b" "a_and_b" ! You can't use `macro parameter character #' in math mode. l.21297 # "a.and.b" "a.and.b.1" ! You can't use `macro parameter character #' in math mode. l.21299 # "X.1" "X" currently; R up to 3.0.2 gave "X" "X.1" ! Missing $ inserted. $ l.21300 Underfull \hbox (badness 10000) in paragraph at lines 21278--21300 \OML/cmm/m/it/10 TRUE\OT1/cmr/m/n/10 )"\OML/cmm/m/it/10 a:and:b\OT1/cmr/m/n/10 ""\OML/cmm/m/it/10 a[]nd[]\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 make:names\OT1/cmr/ m/n/10 (\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 aandb\OT1/cmr/m/n/ 10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 a[]nd[]\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 ; unique \OT1/cmr/m/n/10 = Overfull \hbox (3.54373pt too wide) in paragraph at lines 21278--21300 \OML/cmm/m/it/10 TRUE; allow[]FALSE\OT1/cmr/m/n/10 )"\OML/cmm/m/it/10 a:and:b\O T1/cmr/m/n/10 ""\OML/cmm/m/it/10 a:and:b:\OT1/cmr/m/n/10 1"\OML/cmm/m/it/10 mak e:names\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 (""\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 X\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 ; unique \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in horizontal mode. l.21301 ...make.names(state.name) != state.name] # those 10 with a space ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21302 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21303 \end{Examples} ! Undefined control sequence. l.21304 \HeaderA {make.unique}{Make Character Strings Unique}{make.unique} ! Undefined control sequence. l.21305 \keyword {character}{make.unique} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21307 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21310 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21312 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21316 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21318 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21319 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21320 \item[\code{names}] a character vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21321 \item[\code{sep}] a character string used to separate a duplicate na... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21323 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21324 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21326 \begin{Details} \relax ! Undefined control sequence. l.21327 The algorithm used by \code {make.unique} has the property that ! Undefined control sequence. l.21328 \code {make.unique(c(A, B)) == make.unique(c(make.unique(A), B))}. ! Undefined control sequence. l.21332 \code {make.unique} to all of the strings at once. ! Undefined control sequence. l.21334 If character vector \code {A} is already unique, then ! Undefined control sequence. l.21335 \code {make.unique(c(A, B))} preserves \code{A}. ! Undefined control sequence. l.21335 ...e{make.unique(c(A, B))} preserves \code {A}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... > [3 for immediate help. ... l.21338 \begin{Value} ! Undefined control sequence. l.21339 A character vector of same length as \code {names} with duplicates ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21341 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21343 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21345 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21347 \begin{SeeAlso} \relax ! Undefined control sequence. l.21348 \code {\LinkA{make.names}{make.names}} ! Undefined control sequence. l.21348 \code{\LinkA {make.names}{make.names}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21349 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21351 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21352 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21361 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21362 \end{Examples} ! Undefined control sequence. l.21363 \HeaderA {mapply}{Apply a Function to Multiple List or Vector Argumen... ! Undefined control sequence. l.21364 \keyword {manip}{mapply} ! Undefined control sequence. l.21365 \keyword {utilities}{mapply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21367 \begin{Description} \relax ! Undefined control sequence. l.21368 \]>code {mapply} is a multivariate version of \code{\LinkA{sapply}{sapp... ! Undefined control sequence. l.21368 ...ply} is a multivariate version of \code {\LinkA{sapply}{sapply}}. ! Undefined control sequence. l.21368 ... a multivariate version of \code{\LinkA {sapply}{sapply}}. ! Undefined control sequence. l.21369 \code {mapply} applies \code{FUN} to the first elements of each \dots ! Undefined control sequence. l.21369 \code{mapply} applies \code {FUN} to the first elements of each \dots ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21372 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21374 \begin{Usage} Underfull \hbox (badness 3930) in paragraph at lines 21359--21375 []\OT1/cmr/m/n/10 rbind(data.frame(x = 1), data.frame(x = 2), data.frame(x = 3) ) ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21379 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21381 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21382 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21383 \item[\code{FUN}] function to apply, found via \code{\LinkA{match.fu... ! Undefined control sequence. l.21383 ...UN}] function to apply, found via \code {\LinkA{match.fun}{match.f... ! Undefined control sequence. l.21383 ...nction to apply, found via \code{\LinkA {match.fun}{match.fun}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21384 \item[\code{...}] arguments to vectorize over (vectors or lists of s... [209 for immediate help. ... l.21386 \item[\code{MoreArgs}] a list of other arguments to \code{FUN}. ! Undefined control sequence. l.21386 ...gs}] a list of other arguments to \code {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21387 \item[\code{SIMPLIFY}] logical or character string; attempt to reduc... ! Undefined control sequence. l.21389 the \code {simplify} argument of \code{\LinkA{sapply}{sapply}}. ! Undefined control sequence. l.21389 the \code{simplify} argument of \code {\LinkA{sapply}{sapply}}. ! Undefined control sequence. l.21389 ...code{simplify} argument of \code{\LinkA {sapply}{sapply}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21390 \item[\code{USE.NAMES}] logical; use names if the first \dots argume... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21393 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21394 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21396 \begin{Details} \relax ! Undefined control sequence. l.21397 \code {mapply} calls \code{FUN} for the values of \code{...} ! Undefined control sequence. l.21397 \code{mapply} calls \code {FUN} for the values of \code{...} ! Undefined control sequence. l.21397 ...alls \code{FUN} for the values of \code {...} ! Undefined control sequence. l.21399 followed by the arguments given in \code {MoreArgs}. The arguments in ! Undefined control sequence. l.21400 the call will be named if \code {...} or \code{MoreArgs} are named. ! Undefined control sequence. l.21400 ...ll will be named if \code{...} or \code {MoreArgs} are named. ! Undefined control sequence. l.21402 Arguments with classes in \code {...} will be accepted, and their ! Undefined control sequence. l.21403 subsetting and \code {length} methods will be used. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21404 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type [4 H for immediate help. ... l.21406 \begin{Value} ! Undefined control sequence. l.21407 A list, or for \code {SIMPLIFY = TRUE}, a vector, array or list. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21408 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21410 \begin{SeeAlso} \relax ! Undefined control sequence. l.21411 \code {\LinkA{sapply}{sapply}}, after which \code{mapply()} is modelled. ! Undefined control sequence. l.21411 \code{\LinkA {sapply}{sapply}}, after which \code{mapply()} is modelled. ! Undefined control sequence. l.21411 ...nkA{sapply}{sapply}}, after which \code {mapply()} is modelled. ! Undefined control sequence. l.21413 \code {\LinkA{outer}{outer}}, which applies a vectorized function to all ! Undefined control sequence. l.21413 \code{\LinkA {outer}{outer}}, which applies a vectorized function to all ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21415 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21417 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21418 \begin{ExampleCode} ! Missing $ inserted. $ l.21425 mapply(function(x, y) seq_ len(x) + y, ! You can't use `macro parameter character #' in math mode. l.21426 c(a = 1, b = 2, c = 3), # names from first ! Missing $ inserted. $ l.21428 Underfull \hbox (badness 10000) in paragraph at lines 21425--21428 []\OT1/cmr/m/n/10 mapply(function(x, y) seq$[]\OML/cmm/m/it/10 en\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ) + \OML/cmm/m/it/10 y; c\OT1/cmr/m/n/10 ( \OML/cmm/m/it/10 a \OT1/cmr/m/n/10 = 1\OML/cmm/m/it/10 ; b \OT1/cmr/m/n/10 = 2\ OML/cmm/m/it/10 ; c \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21431 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21432 \end{Examples} ! Undefined control sequence. l.21433 \HeaderA {margin.table}{Compute table margin}{margin.table} ! Undefined control sequence. l.21434 \keyword {array}{margin.table} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companio> for immediate help. ... l.21436 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21439 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21441 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 21429--21442 []\OT1/cmr/m/n/10 word <- func-tion(C, k) paste(rep.int(C, k), col-lapse = "") Underfull \hbox (badness 1400) in paragraph at lines 21429--21442 \OT1/cmr/m/n/10 gin.tableCompute ta-ble margin-mar-gin.table ar-ray-mar-gin.tab le For a con- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21445 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21447 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21448 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21449 \item[\code{x}] an array ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21450 \item[\code{margin}] index number (1 for rows, etc.) ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21451 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21452 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21454 \begin{Details} \relax ! Undefined control sequence. l.21455 This is really just \code {apply(x, margin, sum)} packaged up for ! Undefined control sequence. l.21456 newbies, except that if \code {margin} has length zero you get ! Undefined control sequence. l.21457 \code {sum(x)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H f]>or immediate help. ... l.21458 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21460 \begin{Value} ! Undefined control sequence. l.21461 ...ant marginal table. The class of \code {x} is copied to the ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21463 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21465 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21467 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21469 \begin{SeeAlso} \relax ! Undefined control sequence. l.21470 \code {\LinkA{prop.table}{prop.table}} and \code{\LinkA{addmargins}{a... ! Undefined control sequence. l.21470 \code{\LinkA {prop.table}{prop.table}} and \code{\LinkA{addmargins}{a... ! Undefined control sequence. l.21470 ...inkA{prop.table}{prop.table}} and \code {\LinkA{addmargins}{addmar... ! Undefined control sequence. l.21470 ...op.table}{prop.table}} and \code{\LinkA {addmargins}{addmargins}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21471 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21473 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21474 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21478 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21479 \end{Examples} ! Undefined control sequence. l.21480 \HeaderA {mat.or.vec}{Create a Matrix or a Vector}{mat.or.vec} ! Undefined control sequence. l.21481 \keyword {array}{mat.or.vec} ! LaTeX Error: En for immediate help. ... l.21483 \begin{Description} \relax ! Undefined control sequence. l.21484 \code {mat.or.vec} creates an \code{nr} by \code{nc} zero matrix if ! Undefined control sequence. l.21484 \code{mat.or.vec} creates an \code {nr} by \code{nc} zero matrix if ! Undefined control sequence. l.21484 ...t.or.vec} creates an \code{nr} by \code {nc} zero matrix if ! Undefined control sequence. l.21485 \code {nc} is greater than 1, and a zero vector of length \code{nr} if ! Undefined control sequence. l.21485 ...an 1, and a zero vector of length \code {nr} if ! Undefined control sequence. l.21486 \code {nc} equals 1. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21487 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21489 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21493 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21495 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21496 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21497 \item[\code{nr, nc}] numbers of rows and columns. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21498 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21499 \end{Arguments} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21501 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21502 \begin{ExampleCode} > ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21505 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21506 \end{Examples} ! Undefined control sequence. l.21507 \HeaderA {match}{Value Matching}{match} ! Undefined control sequence. l.21508 \aliasA {\%in\%}{match}{.Rpcent.in.Rpcent.} ! Undefined control sequence. l.21509 \keyword {manip}{match} ! Undefined control sequence. l.21510 \keyword {logic}{match} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21512 \begin{Description} \relax ! Undefined control sequence. l.21513 \code {match} returns a vector of the positions of (first) matches of ! Undefined control sequence. l.21516 \code {\%in\%} is a more intuitive interface as a binary operator, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21519 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21521 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21527 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21529 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21530 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21531 \item[\code{x}] vector or \code{NULL}: the values to be matched. ! Undefined control sequence. l.21531 \item[\code{x}] vector or \code {NULL}: the values to be matched. ! Undefined control sequence. l.21532 \LinkA {Long vectors}{Long vectors} are supported. [210 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21533 \item[\code{table}] vector or \code{NULL}: the values to be matched ... ! Undefined control sequence. l.21533 \item[\code{table}] vector or \code {NULL}: the values to be matched ... ! Undefined control sequence. l.21534 \LinkA {Long vectors}{Long vectors} are not supported. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21535 \item[\code{nomatch}] the value to be returned in the case when no m... ! Undefined control sequence. l.21536 found. Note that it is coerced to \code {integer}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21537 \item[\code{incomparables}] a vector of values that cannot be matche... ! Undefined control sequence. l.21538 value in \code {x} matching a value in this vector is assigned the ! Undefined control sequence. l.21539 \code {nomatch} value. For historical reasons, \code{FALSE} is ! Undefined control sequence. l.21539 ...} value. For historical reasons, \code {FALSE} is ! Undefined control sequence. l.21540 equivalent to \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21541 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21542 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21544 \begin{Details} \relax ! Undefined control sequence. l.21545 \code {\%in\%} is currently defined as \\{} ! Undefined control sequence. l.21546 \code {"\%in\%" <- function(x, table) match(x, table, nomatch = 0) > 0} ! Undefined control sequence. l.21549 then \code {x} and \code{table} are coerced to a common type (the later ! Undefined control sequence. l.21549 then \code{x} and \code {table} are coerced to a common type (the later ! Undefined control sequence. l.21550 of the two types in \R {}'s ordering, logical < integer < numeric < ! Undefined control sequence. l.21551 ...< character) before matching. If \code {incomparables} has ! Undefined control sequence. l.21558 For all types, \code {NA} matches \code{NA} and no other value. ! Undefined control sequence. l.21558 For all types, \code{NA} matches \code {NA} and no other value. ! Undefined control sequence. l.21559 For real and complex values, \code {NaN for immediate help. ... l.21571 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21573 \begin{Value} ! Undefined control sequence. l.21574 A vector of the same length as \code {x}. ! Undefined control sequence. l.21576 \code {match}: An integer vector giving the position in \code{table} of ! Undefined control sequence. l.21576 ...ger vector giving the position in \code {table} of ! Undefined control sequence. l.21577 ...ch if there is a match, otherwise \code {nomatch}. ! Undefined control sequence. l.21579 If \code {x[i]} is found to equal \code{table[j]} then the value ! Undefined control sequence. l.21579 If \code{x[i]} is found to equal \code {table[j]} then the value ! Undefined control sequence. l.21580 returned in the \code {i}-th position of the return value is \code{j}, ! Undefined control sequence. l.21580 ...h position of the return value is \code {j}, ! Undefined control sequence. l.21581 for the smallest possible \code {j}. If no match is found, the value ! Undefined control sequence. l.21582 is \code {nomatch}. ! Undefined control sequence. l.21584 \code {\%in\%}: A logical vector, indicating if a match was located for ! Undefined control sequence. l.21585 each element of \code {x}: thus the values are \code{TRUE} or ! Undefined control sequence. l.21585 ... of \code{x}: thus the values are \code {TRUE} or ! Undefined control sequence. l.21586 \code {FALSE} and never \code{NA}. ! Undefined control sequence. l.21586 \code{FALSE} and never \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21587 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Co>] for immediate help. ... l.21589 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21593 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21595 \begin{SeeAlso} \relax ! Undefined control sequence. l.21596 \code {\LinkA{pmatch}{pmatch}} and \code{\LinkA{charmatch}{charmatch}... ! Undefined control sequence. l.21596 \code{\LinkA {pmatch}{pmatch}} and \code{\LinkA{charmatch}{charmatch}... ! Undefined control sequence. l.21596 \code{\LinkA{pmatch}{pmatch}} and \code {\LinkA{charmatch}{charmatch}... ! Undefined control sequence. l.21596 ...LinkA{pmatch}{pmatch}} and \code{\LinkA {charmatch}{charmatch}} fo... ! Undefined control sequence. l.21597 string matching, \code {\LinkA{match.arg}{match.arg}}, etc for functi... ! Undefined control sequence. l.21597 string matching, \code{\LinkA {match.arg}{match.arg}}, etc for functi... ! Undefined control sequence. l.21599 \code {\LinkA{findInterval}{findInterval}} similarly returns a vector... ! Undefined control sequence. l.21599 \code{\LinkA {findInterval}{findInterval}} similarly returns a vector... ! Undefined control sequence. l.21602 \code {\LinkA{is.element}{is.element}} for an S-compatible equivalent... ! Undefined control sequence. l.21602 \code{\LinkA {is.element}{is.element}} for an S-compatible equivalent... ! Undefined control sequence. l.21602 ...for an S-compatible equivalent of \code {\%in\%}. ! Undefined control sequence. l.21604 \code {\LinkA{unique}{unique}} (and \code{\LinkA{duplicated}{duplicat... ! Undefined control sequence. l.21604 \code{\LinkA {unique}{unique}} (and \code{\LinkA{duplicated}{duplicat... ! Undefined control sequence. l.21604 \code{\LinkA{unique}{unique}} (and \code {\LinkA{duplicated}{duplicat... ! Undefined control sequence. l.21604 ...inkA{unique}{unique}} (and \code{\LinkA {duplicated}{duplicated}})... ! Undefined control sequence. l.21605 ...s of ``match'' or ``equality'' as \code {match()}, ! Undefined control sequence. l.21606 and these are less strict than \code {\LinkA{==}{==}}, e.g., for ! Undefined control sequence. l.21606 ...these are less strict than \code{\LinkA {==}{==}}, e.g., for ! Undefined control sequence. l.21607 \code {\LinkA{NA}{NA}} and \code{\LinkA{NaN}{NaN}} in numeric or comp... ! Undefined control sequence. l.21607 \code{\LinkA {NA}{NA}} and \code{\LinkA{NaN}{NaN}} in numeric or comp... ! Undefined control sequence. l.21607 \code{\LinkA{NA}{NA}} and \code {\LinkA{NaN}{NaN}} in numeric or comp... ! Undefined control sequence. l.21607 \code{\LinkA{NA}{NA}} and \code{\LinkA {NaN}{NaN}} in numeric or comp... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. [6>... l.21609 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21611 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21612 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21613 # # The intersection of two sets can be defined via match(): ! You can't use `macro parameter character #' in horizontal mode. l.21613 ## The intersection of two sets can be defined via match(): ! You can't use `macro parameter character #' in horizontal mode. l.21614 # # Simple version: ! You can't use `macro parameter character #' in horizontal mode. l.21614 ## Simple version: ! You can't use `macro parameter character #' in horizontal mode. l.21615 # # intersect <- function(x, y) y[match(x, y, nomatch = 0)] ! You can't use `macro parameter character #' in horizontal mode. l.21615 ## intersect <- function(x, y) y[match(x, y, nomatch = 0)] ! You can't use `macro parameter character #' in horizontal mode. l.21616 intersect # the R function in base is slightly more careful ! You can't use `macro parameter character #' in horizontal mode. l.21625 # # Note that setdiff() is very similar and typically makes more sense: ! You can't use `macro parameter character #' in horizontal mode. l.21625 ## Note that setdiff() is very similar and typically makes more sense: ! You can't use `macro parameter character #' in horizontal mode. l.21627 setdiff(c(1:6,7:2), c(3,7,12)) # -> unique values ! You can't use `macro parameter character #' in vertical mode. l.21629 # # Illuminating example about NA matching ! You can't use `macro parameter character #' in vertical mode. l.21629 ## Illuminating example about NA matching ! You can't use `macro parameter character #' in horizontal mode. l.21635 zM # #--> many "NA's" (= 1) and the four non-NA's (3 different ones, ... ! You can't use `macro parameter character #' in horizontal mode. l.21635 zM ## --> many "NA's" (= 1) and the four non-NA's (3 different ones, ... [211 for immediate help. ... l.21649 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21650 \end{Examples} ! Undefined control sequence. l.21651 \HeaderA {match.arg}{Argument Verification Using Partial Matching}{ma... ! Undefined control sequence. l.21652 \keyword {programming}{match.arg} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21654 \begin{Description} \relax ! Undefined control sequence. l.21655 \code {match.arg} matches \code{arg} against a table of candidate ! Undefined control sequence. l.21655 \code{match.arg} matches \code {arg} against a table of candidate ! Undefined control sequence. l.21656 values as specified by \code {choices}, where \code{NULL} means to take ! Undefined control sequence. l.21656 ...pecified by \code{choices}, where \code {NULL} means to take ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21658 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21660 \begin{Usage} Underfull \hbox (badness 5637) in paragraph at lines 21641--21661 \OT1/cmr/m/n/10 zN, Vec-tor-ize(identical,c("x","y")), FALSE,FALSE,FALSE,FALSE) ) re- Underfull \hbox (badness 10000) in paragraph at lines 21641--21661 \OT1/cmr/m/n/10 FALSE,FALSE,FALSE,FALSE) stopifnot(identical(Ixy, diag(8) == 1) ) ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21664 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21666 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21667 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21668 \item[\code{arg}] a character vector (of length one unless \code{sev... ! Undefined control sequence. l.21668 ...cter vector (of length one unless \code {several.ok} ! Undefined control sequence. l.21669 is \code {TRUE}) or \code{NULL}. ! Undefined control sequence. l.21669 is \code{TRUE}) or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21670 \item[\code{choices}] a character vector of candidate values ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21671 \item[\code{several.ok}] logical specifying if \code{arg} should be ... ! Undefined control sequence. l.21671 ...everal.ok}] logical specifying if \code {arg} should be allowed ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21673 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21674 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21676 \begin{Details} \relax ! Undefined control sequence. l.21677 In the one-argument form \code {match.arg(arg)}, the choices are ! Undefined control sequence. l.21678 ...t setting for the formal argument \code {arg} of ! Undefined control sequence. l.21679 the function from which \code {match.arg} was called. (Since default ! Undefined control sequence. l.21680 argument matching will set \code {arg} to \code{choices}, this is ! Undefined control sequence. l.21680 ...t matching will set \code{arg} to \code {choices}, this is ! Undefined control sequence. l.21682 \code {several.ok} is \code{TRUE}' rule, and returns the first ! Undefined control sequence. l.21682 \code{several.ok} is \code {TRUE}' rule, and returns the first ! Undefined control sequence. l.21685 Matching is done using \code {\LinkA{pmatch}{pmatch}}, so \code{arg} ... ! Undefined control sequence. l.21685 Matching is done using \code{\LinkA > {pmatch}{pmatch}}, so \code{arg} ... ! Undefined control sequence. l.21685 ...\code{\LinkA{pmatch}{pmatch}}, so \code {arg} may be ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21688 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21690 \begin{Value} ! Undefined control sequence. l.21692 ...herwise, an error is signalled if \code {several.ok} is ! Undefined control sequence. l.21693 false, as per default. When \code {several.ok} is true and more than ! Undefined control sequence. l.21694 one element of \code {arg} has a match, all unabbreviated versions of ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21696 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21698 \begin{SeeAlso} \relax ! Undefined control sequence. l.21699 \code {\LinkA{pmatch}{pmatch}}, ! Undefined control sequence. l.21699 \code{\LinkA {pmatch}{pmatch}}, ! Undefined control sequence. l.21700 \code {\LinkA{match.fun}{match.fun}}, ! Undefined control sequence. l.21700 \code{\LinkA {match.fun}{match.fun}}, ! Undefined control sequence. l.21701 \code {\LinkA{match.call}{match.call}}. ! Undefined control sequence. l.21701 \code{\LinkA {match.call}{match.call}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21702 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21704 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21705 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21707 # # Extends the example for 'switch' ! You can't use `macro parameter character #' in horizontal mode. l.21707 ## Extends the example for 'switch' ! You can't use `macro parameter character #' in horizontal mode. l.21716 center(x, "t") # Works ! You can't use `macro parameter character #' in horizontal mode. l.21717 center(x, "med") # Works ! You can't use `macro parameter character #' in horizontal mode. l.21718 try(center(x, "m")) # Error ! You can't use `macro parameter character #' in vertical mode. l.21722 # # Allowing more than one match: ! You can't use `macro parameter character #' in vertical mode. l.21722 ## for immediate help. ... l.21726 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21727 \end{Examples} ! Undefined control sequence. l.21728 \HeaderA {match.call}{Argument Matching}{match.call} ! Undefined control sequence. l.21729 \keyword {programming}{match.call} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21731 \begin{Description} \relax ! Undefined control sequence. l.21732 \code {match.call} returns a call in which all of the specified argum... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21734 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21736 \begin{Usage} Underfull \hbox (badness 1215) in paragraph at lines 21722--21737 []\OT1/cmr/m/n/10 Allowing more than one match: match.arg(c("gauss", "rect", "e p"), Underfull \hbox (badness 1946) in paragraph at lines 21722--21737 \OT1/cmr/m/n/10 c("gaussian", "epanech-nikov", "rect-an-gu-lar", "tri-an-gu-lar "), sev-eral.ok = Underfull \hbox (badness 1048) in paragraph at lines 21722--21737 \OT1/cmr/m/n/10 TRUE) match.callArgument Match-ing-match.call pro-gram-ming-m atch.call ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21743 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21745 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21746 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21747 \item[\code{definition}] a function, by default the function from which ! Undefined control sequence. l.21748 \code {match.call} is called. See details. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21749 \item[\code{call}] an unevaluated call to the function specified by ! Undefi>ned control sequence. l.21750 \code {definition}, as generated by \code{\LinkA{call}{call}}. ! Undefined control sequence. l.21750 \code{definition}, as generated by \code {\LinkA{call}{call}}. ! Undefined control sequence. l.21750 ...finition}, as generated by \code{\LinkA {call}{call}}. [212 [7] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21751 \item[\code{expand.dots}] logical. Should arguments matching \code{... ! Undefined control sequence. l.21751 ...gical. Should arguments matching \code {...} ! Undefined control sequence. l.21752 in the call be included or left as a \code {...} argument? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21753 \item[\code{envir}] an environment, from which the \code{...} in \co... ! Undefined control sequence. l.21753 ...}] an environment, from which the \code {...} in \code{call} ! Undefined control sequence. l.21753 ...ent, from which the \code{...} in \code {call} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21755 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21756 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21758 \begin{Details} \relax ! Undefined control sequence. l.21760 (also known as a `closure'): \code {match.call} does not support ! Undefined control sequence. l.21764 \code {match.call} is most commonly used in two circumstances: ! Undefined control sequence. l.21768 ...ctions record the call as element \code {call} of ! Undefined control sequence. l.21769 ...st they return. Here the default \code {expand.dots = TRUE} ! Undefined control sequence. l.21773 \code {model.frame}. Here the common idiom is that ! Undefined control sequence. l.21774 \code {expand.dots = FALSE} is used, and the \code{...} element ! Undefined control sequence. l.21774 ...nd.dots = FALSE} is used, and the \code {...} element ! Undefined control sequence. l.21777 \code {lm}. ! Undefined control sequence. l.21782 Calling \code {match.call} outside a function without specifying ! Undefined control sequence. l.21783 \code {definition} is an error. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21784 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21786 \begin{Value} ! Undefined control sequence. l.21787 An object of class \code for immediate help. ... l.21788 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21790 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21794 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21796 \begin{SeeAlso} \relax ! Undefined control sequence. l.21797 \code {\LinkA{sys.call}{sys.call}()} is similar, but does \emph{not} ... ! Undefined control sequence. l.21797 \code{\LinkA {sys.call}{sys.call}()} is similar, but does \emph{not} ... ! Undefined control sequence. l.21799 \code {\LinkA{call}{call}}, \code{\LinkA{pmatch}{pmatch}}, \code{\Lin... ! Undefined control sequence. l.21799 \code{\LinkA {call}{call}}, \code{\LinkA{pmatch}{pmatch}}, \code{\Lin... ! Undefined control sequence. l.21799 \code{\LinkA{call}{call}}, \code {\LinkA{pmatch}{pmatch}}, \code{\Lin... ! Undefined control sequence. l.21799 \code{\LinkA{call}{call}}, \code{\LinkA {pmatch}{pmatch}}, \code{\Lin... ! Undefined control sequence. l.21799 ...}, \code{\LinkA{pmatch}{pmatch}}, \code {\LinkA{match.arg}{match.a... ! Undefined control sequence. l.21799 ...e{\LinkA{pmatch}{pmatch}}, \code{\LinkA {match.arg}{match.arg}}, ! Undefined control sequence. l.21800 \code {\LinkA{match.fun}{match.fun}}. ! Undefined control sequence. l.21800 \code{\LinkA {match.fun}{match.fun}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21801 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21803 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21804 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21806 # # -> get(x = "abc", pos = 3, inherits = FALSE) ! You can't use `macro parameter character #' in horizontal mode. l.21806 ## -> get(x = "abc", pos = 3, inherits = FALSE) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21811 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. > for immediate help. ... l.21812 \end{Examples} ! Undefined control sequence. l.21813 \HeaderA {match.fun}{Extract a Function Specified by Name}{match.fun} ! Undefined control sequence. l.21814 \keyword {programming}{match.fun} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21816 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21820 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21822 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21826 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21828 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21829 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21830 \item[\code{FUN}] item to match as function: a function, symbol or ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21832 \item[\code{descend}] logical; control whether to search past non-fu... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21834 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21835 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21837 \begin{Details} \relax ! Undefined control sequence. l.21838 \code {match.fun} is not intended to be used at the top level since it ! Undefined control sequence. l.21841 If \code {FUN} is a function, it is returned. If it is a symbol (for ! Undefined control sequence. l.21843 ...h one, it will be looked up using \code {get} ! Undefined control sequence. l.21846 symbol (using \code {substitute} twice), and if that fails, an error is ! Undefined control sequence. l.21849 If \code {descend = TRUE}, \code{match.fun} will look past non-function ! Undefined control sequence. l.21849 If \code{descend = TRUE}, \code {match.fun} will look past non-function ! Undefined control sequence. l.21850 ...with the given name; otherwise if \code {FUN} points to a ! Undefined control sequence. l.21853 ...is used in base functions such as \code {\LinkA{apply}{apply}}, ! Undefined control sequence. l.21853 ... in base functions such as \code{\LinkA {apply}{apply}}, ! Undefined control sequence. l.21854 \code {\LinkA{lapply}{lapply}}, \code{\LinkA{outer}{outer}}, and \cod... ! Undefined control sequence. l.21854 \code{\LinkA {lapply}{lapply}}, \code{\LinkA{outer}{outer}}, and \cod... ! Undefined control sequence. l.21854 \code{\LinkA{lapply}{lapply}}, \code {\LinkA{outer}{outer}}, and \cod... ! Undefined control sequence. l.21854 ...e{\LinkA{lapply}{lapply}}, \code{\LinkA {outer}{outer}}, and \code... ! Undefined control sequence. l.21854 ... \code{\LinkA{outer}{outer}}, and \code {\LinkA{sweep}{sweep}}. ! Undefined control sequence. l.21854 ...\LinkA{outer}{outer}}, and \code{\LinkA {sweep}{sweep}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21855 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21857 \begin{Value} ! Undefined control sequence. l.21858 A function matching \code {FUN} or an error is generated. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21859 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21861 \begin{Section} {Bugs} ! Undefined control sequence. l.21862 The \code {descend} argument is a bit of misnomer and probably not ! Undefined control sequence. l.21865 ... to fully foolproof this. If one \code {attach}es a ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21869 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21871 \begin{Author} [8> \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21874 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21876 \begin{SeeAlso} \relax ! Undefined control sequence. l.21877 \code {\LinkA{match.arg}{match.arg}}, \code{\LinkA{get}{get}} ! Undefined control sequence. l.21877 \code{\LinkA {match.arg}{match.arg}}, \code{\LinkA{get}{get}} ! Undefined control sequence. l.21877 \code{\LinkA{match.arg}{match.arg}}, \code {\LinkA{get}{get}} ! Undefined control sequence. l.21877 ...kA{match.arg}{match.arg}}, \code{\LinkA {get}{get}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21878 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21880 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21881 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21882 # Same as get("*"): ! You can't use `macro parameter character #' in horizontal mode. l.21884 # Overwrite outer with a vector ! You can't use `macro parameter character #' in horizontal mode. l.21886 try(match.fun(outer, descend = FALSE)) # -> Error: not a function ! You can't use `macro parameter character #' in horizontal mode. l.21887 match.fun(outer) # finds it anyway ! You can't use `macro parameter character #' in horizontal mode. l.21888 is.function(match.fun("outer")) # as well ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21889 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21890 \end{Examples} ! Undefined control sequence. l.21891 \HeaderA {MathFun}{Miscellaneous Mathematical Functions}{MathFun} ! Undefined control sequence. l.21892 \aliasA {abs}{MathFun}{abs} ! Undefined control sequence. l.21893 \aliasA {sqrt}{MathFun}{sqrt} ! Undefined control sequence. l.21894 \keyword {math}{MathFun} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21896 \begin{Description} \relax ! Undefined control sequence. l.21897 \code {abs(x)} computes the absolute value of x, \code{sqrt(x)} compu... ! Undefined control sequence. l.21897 ...computes the absolute value of x, \code {sqrt(x)} computes the ! Undefined control sequence. l.21898 (principal) square root of x, \eqn {\sqrt{x}}{}. ! Missing $ inserted. $ l.21898 (principal) square root of x, \eqn{\sqrt{ x}}{}. ! Extra }, or forgotten $. l.21898 ...cipal) square root of x, \eqn{\sqrt{x}} {}. ! Missing $ inserted. $ l.21899 [213]] ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21901 \end{Description} ! Missing } inserted. } l.21901 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21903 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21908 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21910 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21911 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21912 \item[\code{x}] a numeric or \code{\LinkA{complex}{complex}} vector ... ! Undefined control sequence. l.21912 \item[\code{x}] a numeric or \code {\LinkA{complex}{complex}} vector ... ! Undefined control sequence. l.21912 \item[\code{x}] a numeric or \code{\LinkA {complex}{complex}} vector ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21913 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21914 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21916 \begin{Details} \relax ! Undefined control sequence. l.21917 These are \LinkA {internal generic}{internal generic} \LinkA{primitiv... ! Undefined control sequence. l.21917 ...ernal generic}{internal generic} \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.21919 \code {\LinkA{Math}{S3groupGeneric}} group generic. For complex ! Undefined control sequence. l.21919 \code{\LinkA {Math}{S3groupGeneric}} group generic. For complex ! Undefined control sequence. l.21920 arguments (and the default method), \code {z}, \code{abs(z) == ! Undefined control sequence. l.21920 ...nd the default method), \code{z}, \code {abs(z) == ! Undefined control sequence. l.21921 \LinkA {Mod}{Mod}(z)} and \code{sqrt(z) == z\textasciicircum{}0.5}. ! Undefined control sequence. l.21921 \LinkA{Mod}{Mod}(z)} and \code {sqrt(z) == z\textasciicircum{}0.5}. ! Undefined control sequence. l.21923 \code {abs(x)} returns an \code{\LinkA{integer}{integer}} vector when... ! Undefined control sequence. l.21923 \code{abs(x)} returns an \code {\LinkA{integer}{integer}} vector when... ! Undefined control sequence. l.21923 \code{abs(x)} returns an \code{\LinkA {integer}{integer}} vector when... ! Undefined control sequence. l.21923 ...kA{integer}{integer}} vector when \code {x} is ! Undefined control sequence. l.21924 \code {integer} or \code{\LinkA{logical}{logical}}. ! Undefined control sequence. l.21924 \code{integer} or \code {\LinkA{logical}{logical}}. ! Undefined control sequence. l.21924 \code{integer} or \code{\LinkA {logical}{logical}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21925 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21927 \begin{Section} {S4 methods} ! Undefined control sequence. l.21929 \code {\LinkA{Math}{S4groupGeneric}} group generic. ! Undefined control sequence. l.21929 \code{\LinkA {Math}{S4groupGeneric}} group generic. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21930 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21932 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21936 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21938 \begin{SeeAlso} \relax ! Undefined control sequence. l.21939 \code {\LinkA{Arithmetic}{Arithmetic}} for simple, \code{\LinkA{log}{... ! Undefined control sequence. l.21939 \code{\LinkA {Arithmetic}{Arithmetic}} for simple, \code{\LinkA{log}{... ! Undefined control sequence. l.21939 ...thmetic}{Arithmetic}} for simple, \code {\LinkA{log}{log}} for log... ! Undefined control sequence. l.21939 ...}{Arithmetic}} for simple, \code{\LinkA {log}{log}} for logarithmic, ! Undefined control sequence. l.21940 \code {\LinkA{sin}{sin}} for trigonometric, and \code{\LinkA{Special}... ! Undefined control sequence. l.21940 \code{\LinkA {sin}{sin}} for trigonometric, and \code{\LinkA{Special}... ! Undefined control sequence. l.21940 ...sin}{sin}} for trigonometric, and \code {\LinkA{Special}{Special}}... ! Undefined control sequence. l.21940 ...n}} for trigonometric, and \code{\LinkA {Special}{Special}} for ! Undefined control sequence. l.21943 `\LinkA {plotmath}{plotmath}' for the use of \code{sqrt} in plot anno... ! Undefined control sequence. l.21943 ...otmath}{plotmath}' for the use of \code {sqrt} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21944 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21946 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21947 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.21948 require(stats) # for spline ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21953 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21954 \end{Examples} ! Undefined control sequence. l.21955 \HeaderA {matmult}{Matrix Multiplication}{matmult} ! Undefined control sequence. l.21956 \aliasA {\%*\%}{matmult}{.Rpcent.*.Rpcent.} ! Undefined control sequence. l.21957 \keyword {array}{matmult} ! Undefined control sequence. l.21958 \keyword {arith}{matmult} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21960 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21965 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21967 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21971 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21973 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21974 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21975 \item[\code{x, y}] numeric or complex matrices or vectors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21976 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21977 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21979 \begin{Details} \relax ! Undefined control sequence. l.21981 ...ed to row or column names, unlike \code {\LinkA{as.matrix}{as.matr... ! Undefined control sequence. l.21981 ...ow or column names, unlike \code{\LinkA {as.matrix}{as.matrix}}. ! Undefined control sequence. l.21984 of the two choices allows \code {x} and \code{y} to get conformable ! Undefined control sequence. l.21984 ...e two choices allows \code{x} and \code {y} to get conformable ! Undefined control sequence. l.21988 ...a function of two arguments named \code {x} and \code{y}. ! Undefined control sequence. l.21988 ... two arguments named \code{x} and \code {y}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21989 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21991 \begin{Value} ! Undefined control sequence. l.21992 ...e or complex matrix product. Use \code {\LinkA{drop}{drop}} to re... ! Undefined control sequence. l.21992 ...mplex matrix product. Use \code{\LinkA {drop}{drop}} to remove ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21994 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21996 \begin{Note} \relax ! Undefined control sequence. l.21998 products can be controlled by \code {\LinkA{options}{options}("matpro... ! Undefined control sequence. l.21998 products can b [9 Output written on R-exts.pdf (186 pages, 1090719 bytes). Transcript written on R-exts.log. e controlled by \code{\LinkA {options}{options}("matpro... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21999 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22001 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22005 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22007 \begin{SeeAlso} \relax ! Undefined control sequence. l.22008 For matrix \emph{cross}products, \code {\LinkA{crossprod}{crossprod}(... ! Undefined control sequence. l.22008 ...trix \emph{cross}products, \code{\LinkA {crossprod}{crossprod}()} and ! Undefined control sequence. l.22009 \code {tcrossprod()} are typically preferable. ! Undefined control sequence. l.22010 \code {\LinkA{matrix}{matrix}}, \code{\LinkA{Arithmetic}{Arithmetic}}... ! Undefined control sequence. l.22010 \code{\LinkA {matrix}{matrix}}, \code{\LinkA{Arithmetic}{Arithmetic}}... ! Undefined control sequence. l.22010 \code{\LinkA{matrix}{matrix}}, \code {\LinkA{Arithmetic}{Arithmetic}}... ! Undefined control sequence. l.22010 ...e{\LinkA{matrix}{matrix}}, \code{\LinkA {Arithmetic}{Arithmetic}},... ! Undefined control sequence. l.22010 ...{\LinkA{Arithmetic}{Arithmetic}}, \code {\LinkA{diag}{diag}}. ! Undefined control sequence. l.22010 ...{Arithmetic}{Arithmetic}}, \code{\LinkA {diag}{diag}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22011 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22013 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22014 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.22017 drop(z) # as scalar ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22024 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22025 \end{Examples} ! Undefined control sequence. l.22026 \HeaderA {matrix}{Matrices}{matrix} ! Undefined control sequence. l.22027 \aliasA {as.matrix}{matrix}{as.matrix} ! Undefined control sequence. l.22028 \methaliasA {as.matrix.data.frame}{matrix}{as.matrix.data.frame} ! Undefined control sequence. l.22029 \methaliasA {as.matrix.default}{matrix}{as.matrix.default} ! Undefined control sequence. l.22030 \aliasA {is.matrix}{matrix}{is.matrix} ! Undefined control sequence. l.22031 \keyword {array}{matrix} ! Undefined control sequence. l.22032 \keyword {algebra}{matrix} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22034 \begin{Description} \relax ! Undefined control sequence. l.22035 \code {matrix} creates a matrix from the given set of values. [214]] ! Undefined control sequence. l.22037 \code {as.matrix} attempts to turn its argument into a matrix. ! Undefined control sequence. l.22039 \code {is.matrix} tests if its argument is a (strict) matrix. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22040 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22042 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22053 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22055 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22056 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22057 \item[\code{data}] an optional data vector (including a list or ! Undefined control sequence. l.22058 \code {\LinkA{expression}{expression}} vector). Non-atomic classed \... ! Undefined control sequence. l.22058 \code{\LinkA {expression}{expression}} vector). Non-atomic classed \... ! Undefined control sequence. l.22058 ...ssion}} vector). Non-atomic classed \R {} objects are ! Undefined control sequence. l.22059 coerced by \code {\LinkA{as.vector}{as.vector}} and all attributes di... ! Undefined control sequence. l.22059 coerced by \code{\LinkA {as.vector}{as.vector}} and all attributes di... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22060 \item[\code{nrow}] the desired number of rows. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22061 \item[\code{ncol}] the desired number of columns. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22062 \item[\code{byrow}] logical. If \code{FALSE} (the default) the matri... ! Undefined control sequence. l.22062 \item[\code{byrow}] logical. If \code {FALSE} (the default) the matri... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22064 \item[\code{dimnames}] A \code{\LinkA{dimnames}{dimnames}} attribute... ! Undefined control sequence. l.22064 \item[\code{dimnames}] A \code {\LinkA{dimnames}{dimnames}} attribute... ! Undefined control sequence. l.22064 \item[\code{dimnames}] A \code{\LinkA {dimnames}{dimnames}} attribute... ! Undefined control sequence. l.22065 \code {NULL} or a \code{list} of length 2 giving the row and column ! Undefined control sequence. l.22065 \code{NULL} or a \code {list} of length 2 giving the row and column ! Undefined control sequence. l.22066 ...ely. An empty list is treated as \code {NULL}, and a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22069 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.22069 \item[\code{x}] an \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22070 \item[\code{...}] additional arguments to be passed to or from methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22071 \item[\code{rownames.force}] logical indicating if the resulting matrix ! Undefined control sequence. l.22072 should have character (rather than \code {NULL}) ! Undefined control sequence. l.22073 \code {\LinkA{rownames}{rownames}}. The default, \code{NA}, uses \co... ! Undefined control sequence. l.22073 \code{\LinkA {rownames}{rownames}}. The default, \code{NA}, uses \co... ! Undefined control sequence. l.22073 ...wnames}{rownames}}. The default, \code {NA}, uses \code{NULL} ! Undefined control sequence. l.22073 ...}}. The default, \code{NA}, uses \code {NULL} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22076 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22077 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22079 \begin{Details} \relax ! Undefined control sequence. l.22080 If one of \code {nrow} or \code{ncol} is not given, an attempt is ! Undefined control sequence. l.22080 If one of \code{nrow} or \code {ncol} is not given, an attempt is ! Undefined control sequence. l.22081 made to infer it from t [10he length of \code {data} and the other ! Undefined control sequence. l.22084 If there are too few elements in \code {data} to fill the matrix, ! Undefined control sequence. l.22085 then the elements in \code {data} are recycled. If \code{data} has ! Undefined control sequence. l.22085 ... in \code{data} are recycled. If \code {data} has ! Undefined control sequence. l.22086 length zero, \code {NA} of an appropriate type is used for atomic ! Undefined control sequence. l.22087 vectors (\code {0} for raw vectors) and \code{NULL} for lists. ! Undefined control sequence. l.22087 ...rs (\code{0} for raw vectors) and \code {NULL} for lists. ! Undefined control sequence. l.22089 \code {is.matrix} returns \code{TRUE} if \code{x} is a vector and has a ! Undefined control sequence. l.22089 \code{is.matrix} returns \code {TRUE} if \code{x} is a vector and has a ! Undefined control sequence. l.22089 ...is.matrix} returns \code{TRUE} if \code {x} is a vector and has a ! Undefined control sequence. l.22090 \code {"\LinkA{dim}{dim}"} attribute of length 2) and \code{FALSE} ot... ! Undefined control sequence. l.22090 \code{"\LinkA {dim}{dim}"} attribute of length 2) and \code{FALSE} ot... ! Undefined control sequence. l.22090 ...dim}"} attribute of length 2) and \code {FALSE} otherwise. ! Undefined control sequence. l.22091 Note that a \code {\LinkA{data.frame}{data.frame}} is \strong{not} a ... ! Undefined control sequence. l.22091 Note that a \code{\LinkA {data.frame}{data.frame}} is \strong{not} a ... ! Undefined control sequence. l.22091 ...nkA{data.frame}{data.frame}} is \strong {not} a matrix by this ! Undefined control sequence. l.22093 specific classes of objects, see \LinkA {InternalMethods}{InternalMet... ! Undefined control sequence. l.22095 \code {as.matrix} is a generic function. The method for data frames ! Undefined control sequence. l.22097 ...logical/complex) column, applying \code {\LinkA{as.vector}{as.vect... ! Undefined control sequence. l.22097 .../complex) column, applying \code{\LinkA {as.vector}{as.vector}} ! Undefined control sequence. l.22098 to factors and \code {\LinkA{format}{format}} to other non-character ... ! Undefined control sequence. l.22098 to factors and \code{\LinkA {format}{format}} to other non-character ... ! Undefined control sequence. l.22104 The default method for \code {as.matrix} calls \code{as.vector(x)}, and ! Undefined control sequence. l.22104 ...method for \code{as.matrix} calls \code {as.vector(x)}, and ! Undefined control sequence. l.22110 \code {is.matrix} is a \LinkA{primitive}{primitive} function. [215]] ! Undefined control sequence. l.22110 \code{is.matrix} is a \LinkA {primitive}{primitive} function. ! Undefined control sequence. l.22112 The \code {print} method for a matrix gives a rectangular layout with ! Undefined control sequence. l.22114 one are printed in the form \samp {integer,7} indicating the type ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22116 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22118 \begin{Note} \relax ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22120 \begin{alltt} dim(x) <- c(nx, ny) ! Missing $ inserted. $ l.22121 dimnames(x) <- list(row_ names, col_names) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22122 \end{alltt} ! Missing $ inserted. $ l.22122 \end{alltt} ! Undefined control sequence. l.22124 will avoid duplicating \code {x}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22125 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22127 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22131 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22133 \begin{SeeAlso} \relax ! Undefined control sequence. l.22134 \code {\LinkA{data.matrix}{data.matrix}}, which attempts to convert t... ! Undefined control sequence. l.22134 \code{\LinkA {data.matrix}{data.matrix}}, which attempts to convert t... Underfull \hbox (badness 1067) in paragraph at lines 22124--22136 []\OT1/cmr/m/n/10 will avoid du-pli-cat-ing x. Becker, R. A., Cham-bers, J. M. and ! Undefined control sequence. l.22137 ...special case of a two-dimensional \code {\LinkA{array}{array}}. ! Undefined control sequence. l.22137 ... case of a two-dimensional \code{\LinkA {array}{array}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22138 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22140 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22141 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.22143 !is.matrix(warpbreaks) # data.frame, NOT matrix! ! You can't use `macro parameter character #' in horizontal mode. l.22145 as.matrix(warpbreaks[1:10,]) # using as.matrix.data.frame(.) method Underfull \hbox (badness 7981) in paragraph at lines 22137--22146 []\OT1/cmr/m/n/10 A ma-trix is the spe-cial case of a two-dimensional ar-ra-yar ray. ! You can't use `macro parameter character #' in vertical mode. l.22147 # # Example of setting row and column names ! You can't use `macro parameter character #' in vertical mode. l.22147 ## Example of setting row and column names ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22152 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22153 \end{Examples} ! Undefined control sequence. l.22154 \HeaderA {maxCol}{Find Maximum Position in Matrix}{maxCol} ! Undefined control sequence. l.22155 \aliasA {max.col}{maxCol}{max.col} ! Undefined control sequence. l.22156 \keyword {utilities}{maxCol} ! Undefined control sequence. l.22157 \keyword {array}{maxCol} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22159 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22161 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22163 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22167 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22169 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22170 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22171 \item[\code{m}] numerical matrix ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22172 \item[\code{ties.method}] a character string specifying how ties are ! Undefined control sequence. l.22173 handled, \code {"random"} by default; can be abbreviated; see ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22175 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22176 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22178 \begin{Details} \relax ! Undefined control sequence. l.22179 When \code {ties.method = "random"}, as per default, ties are broken at ! Undefined control sequence. l.22182 \eqn {10^{-5}}{}, relative to the largest (in magnitude, omitting ! Missing $ inserted. $ l.22182 \eqn{10^ {-5}}{}, relative to the largest (in magnitude, omitting ! Extra }, or forgotten $. l.22182 \eqn{10^{-5}} {}, relative to the largest (in magnitude, omitting ! Missing $ inserted. $ l.22184 ! Undefined control sequence. l.22185 If \code {ties.method = "first"}, \code{max.col} returns the ! Undefined control sequence. l.22185 If \code{ties.method = "first"}, \code {max.col} returns the ! Undefined control sequence. l.22187 same as \code {\LinkA{unname}{unname}(\LinkA{apply}{apply}(m, 1, \L... ! Undefined control sequence. l.22187 same as \code{\LinkA {unname}{unname}(\LinkA{apply}{apply}(m, 1, \L... ! Undefined control sequence. l.22187 ... as \code{\LinkA{unname}{unname}(\LinkA {apply}{apply}(m, 1, \Link... ! Undefined control sequence. l.22187 ...name}(\LinkA{apply}{apply}(m, 1, \LinkA {which.max}{which.max}))}.... ! Undefined control sequence. l.22188 Correspondingly, \code {ties.method = "last"} returns the \emph{last} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22190 \end{Details} ! Missing } inserted. } l.22190 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22192 \begin{Value [11} ! Undefined control sequence. l.22194 length \code {nrow(m)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22195 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22197 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22201 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22203 \begin{SeeAlso} \relax ! Undefined control sequence. l.22204 \code {\LinkA{which.max}{which.max}} for vectors. ! Undefined control sequence. l.22204 \code{\LinkA {which.max}{which.max}} for vectors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22205 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22207 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22208 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.22209 table(mc <- max.col(swiss)) # mostly "1" and "5", 5 x "2" and once "4" ! You can't use `macro parameter character #' in horizontal mode. l.22210 ...(print(mr <- max.col(t(swiss)))) , ] # 3 33 45 45 33 6 ! You can't use `macro parameter character #' in horizontal mode. l.22212 set.seed(1) # reproducible example: ! You can't use `macro parameter character #' in horizontal mode. l.22216 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.22216 ## Not run: Underfull \hbox (badness 10000) in paragraph at lines 22212--22221 []\OT1/cmr/m/n/10 set.seed(1) re-pro-ducible ex-am-ple: (mm <- rbind(x = Underfull \hbox (badness 10000) in paragraph at lines 22212--22221 \OT1/cmr/m/n/10 round(2*stats::runif(12)), y = round(5*stats::runif(12)), z = ! You can't use `macro parameter character #' in vertical mode. l.22222 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.22222 ## End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.22223 # # column indices of all row maxima : ! You can't use `macro parameter character #' in horizontal mode. l.22223 ## column indices of all row maxima : ! You can't use `macro parameter character #' in horizontal mode. l.22225 max.col(mm) ; max.col(mm) # "random" ! You can't use `macro parameter character #' in horizontal mode. l.22226 max.col(mm, "first") # ] -> 4 6 5 ! You can't use `macro parameter character #' in horizontal mode. l.22227 max.col(mm, "last") # -> 7 9 11 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22229 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22230 \end{Examples} ! Undefined control sequence. l.22231 \HeaderA {mean}{Arithmetic Mean}{mean} ! Undefined control sequence. l.22232 \methaliasA {mean.default}{mean}{mean.default} ! Undefined control sequence. l.22233 \keyword {univar}{mean} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22235 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22237 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22239 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 22231--22240 \OT1/cmr/m/n/10 meanArithmetic Mean-mean mean.defaultmeanmean.default uni-varme an [216 Chapter 3 [12]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22246 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22248 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22249 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22250 \item[\code{x}] An \R{} object. Currently there are methods for ! Undefined control sequence. l.22250 \item[\code{x}] An \R {} object. Currently there are methods for ! Undefined control sequence. l.22251 numeric/logical vectors and \LinkA {date}{Dates}, ! Undefined control sequence. l.22252 \LinkA {date-time}{date.Rdash.time} and \LinkA{time interval}{time in... ! Undefined control sequence. l.22252 ...{date-time}{date.Rdash.time} and \LinkA {time interval}{time inter... ! Undefined control sequence. l.22253 are allowed for \code {trim = 0}, only. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22254 \item[\code{trim}] the fraction (0 to 0.5) of observations to be ! Undefined control sequence. l.22255 trimmed from each end of \code {x} before the mean is computed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22258 \item[\code{na.rm}] a logical value indicating whether \code{NA} ! Undefined control sequence. l.22258 ... logical value indicating whether \code {NA} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22260 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22261 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22262 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22264 \begin{Value} ! Undefined control sequence. l.22265 If \code {trim} is zero (the default), the arithmetic mean of the ! Undefined control sequence. l.22266 values in \code {x} is computed, as a numeric or complex vector of ! Undefined control sequence. l.22267 length one. If \code {x} is not logical (coerced to numeric), numeric ! Undefined control sequence. l.22268 (including integer) or complex, \code {NA\_real\_} is returned, with ... ! Undefined control sequence. l.22270 If \code {trim} is non-zero, a symmetrically trimmed mean is computed ! Undefined control sequence. l.22271 with a fraction of \code {trim} observations deleted from each end ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22273 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22275 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22279 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22281 \begin{SeeAlso} \relax ! Undefined control sequence. l.22282 \code {\LinkA{weighted.mean}{weighted.mean}}, \code{\LinkA{mean.POSIX... ! Undefined control sequence. l.22282 \code{\LinkA {weighted.mean}{weighted.mean}}, \code{\LinkA{mean.POSIX... ! Undefined control sequence. l.22282 ...A{weighted.mean}{weighted.mean}}, \code {\LinkA{mean.POSIXct}{mean... ! Undefined control sequence. l.22282 ...ted.mean}{weighted.mean}}, \code{\LinkA {mean.POSIXct}{mean.POSIXc... ! Undefined control sequence. l.22283 \code {\LinkA{colMeans}{colMeans}} for row and column means. ! Undefined control sequence. l.22283 \code{\LinkA {colMeans}{colMeans}} for row and column means. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22284 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22286 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22287 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22291 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22292 \end{Examples} ! Undefined control sequence. l.22293 \HeaderA {memCompress}{In-memory Compression and Decompression}{memCo... ! Undefined control sequence. l.22294 \aliasA {memDecompress}{memCompress}{memDecompress} ! Undefined control sequence. l.22295 \keyword {file}{memCompress} ! Undefined control sequence. l.22296 \keyword {connection}{memCompress} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22298 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22300 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22302 \begin{Usage} Underfull \hbox (badness 2680) in paragraph at lines 22270--22303 \OT1/cmr/m/n/10 memory Com-pres-sion and De-com-pres-sion-mem-Com-press memDe-c om-press- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22310 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22312 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22313 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22314 \item[\code{from}] A raw vector. For \code{memCompress} a character... ! Undefined control sequence. l.22314 ...m[\code{from}] A raw vector. For \code {memCompress} a character ... ! Undefined control sequence. l.22316 by \code {"\bsl{}n"}. ! Undefined control sequence. l.22316 by \code{"\bsl {}n"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22317 \item[\code{type}] character string, the type of compression. May be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22319 \item[\code{asChar}] [13 logical: should the result be converted to a ch... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22321 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22322 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22324 \begin{Details} \relax ! Undefined control sequence. l.22325 \code {type = "none"} passes the input through unchanged, but may be ! Undefined control sequence. l.22326 useful if \code {type} is a variable. ! Undefined control sequence. l.22328 \code {type = "unknown"} attempts to detect the type of compression ! Undefined control sequence. l.22329 ...: this will always succeed for \command {bzip2} ! Undefined control sequence. l.22332 (\code {"\bsl{}x1f\bsl{}x8b"}) added to files by the \command{gzip} p... ! Undefined control sequence. l.22332 (\code{"\bsl {}x1f\bsl{}x8b"}) added to files by the \command{gzip} p... ! Undefined control sequence. l.22332 (\code{"\bsl{}x1f\bsl {}x8b"}) added to files by the \command{gzip} p... ! Undefined control sequence. l.22332 ...{}x8b"}) added to files by the \command {gzip} program (and ! Undefined control sequence. l.22333 to files written by \code {\LinkA{gzfile}{gzfile}}), but \code{memCom... ! Undefined control sequence. l.22333 to files written by \code{\LinkA {gzfile}{gzfile}}), but \code{memCom... ! Undefined control sequence. l.22333 ...ode{\LinkA{gzfile}{gzfile}}), but \code {memCompress} does ! Undefined control sequence. l.22336 \command {bzip2} compression always adds a header (\code{"BZh"}). ! Undefined control sequence. l.22336 ...compression always adds a header (\code {"BZh"}). ! Undefined control sequence. l.22338 Compressing with \code {type = "xz"} is equivalent to compressing a ! Undefined control sequence. l.22339 file with \command {xz -9e} (including adding the `magic' ! Undefined control sequence. l.22341 compressed with \command {xz} version 4.999 and some versions of ! Undefined control sequence. l.22342 \command {lzma}. There are other versions, in particular `raw' ! Undefined control sequence. l.22345 ...ression can expand the input: for \code {"gzip"} ! Undefined control sequence. l.22346 and \code {"bzip2"} the maximum expansion is known and so ! Undefined control sequence. l.22347 \code {memCompress} can always allocate sufficient space. For ! Undefined control sequence. l.22348 \code {"xz"} it is possible (but extremely unlikely) that compression ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22350 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22352 \begin{Value} ! Undefined control sequence. l.22353 ... vector or a character string (if \code {asChar = TRUE}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22354 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22356 \begin{SeeAlso} \relax ! Undefined control sequence. l.22357 \LinkA {connections}{connections}. [217]] ! Undefined control sequence. l.22359 \code {\LinkA{extSoftVersion}{extSoftVersion}} for the versions of th... ! Undefined control sequence. l.22359 \code{\LinkA {extSoftVersion}{extSoftVersion}} for the versions of th... ! Undefined control sequence. l.22359 ...Version}} for the versions of the \code {zlib}, ! Undefined control sequence. l.22360 \code {bzip2} and \code{xz} libraries in use. ! Undefined control sequence. l.22360 \code{bzip2} and \code {xz} libraries in use. ! Undefined control sequence. l.22362 \url {https://en.wikipedia.org/wiki/Data_compression} for background on ! Missing $ inserted. $ l.22362 \url{https://en.wikipedia.org/wiki/Data_ compression} for background on ! Extra }, or forgotten $. l.22362 ...en.wikipedia.org/wiki/Data_compression} for background on ! Undefined control sequence. l.22363 data compression, \url {http://zlib.net/}, ! Undefined control sequence. l.22364 \url {https://en.wikipedia.org/wiki/Gzip}, \url{http://www.bzip.org/}, ! Undefined control sequence. l.22364 ...tps://en.wikipedia.org/wiki/Gzip}, \url {http://www.bzip.org/}, ! Undefined control sequence. l.22365 \url {https://en.wikipedia.org/wiki/Bzip2}, \url{http://tukaani.org/xz/} ! Undefined control sequence. l.22365 ...ps://en.wikipedia.org/wiki/Bzip2}, \url {http://tukaani.org/xz/} ! Undefined control sequence. l.22366 and \url {https://en.wikipedia.org/wiki/Xz} for references about the ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22368 \end{SeeAlso} ! Missing $ inserted. $ l.22368 \end{SeeAlso} ! Missing } inserted. } l.22368 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22370 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22371 \begin{ExampleCode} ! Undefined control sequence. l.22376 ...mpress(txt.gz, "g", asChar = TRUE), "\n ")[[1]] ! You can't use `macro parameter character #' in horizontal mode. l.22380 # # can auto-detect bzip2: ! You can't use `macro parameter character #' in horizontal mode. l.22380 ## can auto-detect bzip2: ! Undefined control sequence. l.22381 ...Decompress(txt.bz2, asChar = TRUE), "\n ")[[1]] Overfull \hbox (1066.34163pt too wide) in paragraph at lines 22362--22383 []\OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Data$[]\OML/cmm/m/it/10 ompress ionforbackgroundondatacompression; []; []; []; []; []and[]forreferencesaboutthe particularschemesused:$ Underfull \hbox (badness 2707) in paragraph at lines 22362--22383 \OT1/cmr/m/n/10 txt <- read-Lines(file.path(R.home("doc"), "COPY-ING")) sum(nch ar(txt)) Underfull \hbox (badness 10000) in paragraph at lines 22362--22383 \OT1/cmr/m/n/10 txt.gz <- mem-Com-press(txt, "g") length(txt.gz) txt2 <- str- Underfull \hbox (badness 10000) in paragraph at lines 22362--22383 \OT1/cmr/m/n/10 split(memDecompress(txt.gz, "g", as-Char = TRUE), "")[[1]] ! You can't use `macro parameter character #' in vertical mode. l.22384 # # xz compression is only worthwhile for large objects ! You can't use `macro parameter character #' in vertical mode. l.22384 ## xz compression is only worthwhile for large objects ! Undefined control sequence. l.22387 ...mDecompress(txt.xz, asChar = TRUE), "\n ")[[1]] ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22389 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22390 \end{Examples} ! Undefined control sequence. l.22391 \HeaderA {Memory}{Memory Available for Data Storage}{Memory} ! Undefined control sequence. l.22392 \keyword {environment}{Memory} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22394 \begin{Description} \relax ! Undefined control sequence. l.22395 How \R {} manages its workspace. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22396 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22398 \begin{Details} \relax ! Undefined control sequence. l.22399 \R {} has a variable-sized workspace. There are (rarely-used) ! Undefined control sequence. l.22403 \R {} maintains separate areas for fixed and variable sized objects. ... ! Undefined control sequence. l.22408 ...cupies 28 bytes on a 32-bit build of \R {}, (usually) 56 ! Undefined control sequence. l.22415 options \option {--min-nsize} and \option{--min-vsize} (or if they are ! Undefined control sequence. l.22415 options \option{--min-nsize} and \option {--min-vsize} (or if they are ! Undefined control sequence. l.22416 not used, the environment variables \env {R\_NSIZE} and \env{R\_VSIZE}) ! Undefined control sequence. l.22416 ...nment variables \env{R\_NSIZE} and \env {R\_VSIZE}) ! Undefined control sequence. l.22417 when \R {} is started. Thereafter \R{} will grow or shrink the areas ! Undefined control sequence. l.22417 when \R{} is started. Thereafter \R {} will grow or shrink the areas ! Undefined control sequence. l.22420 How much time \R {} spends in the garbage collector will depend on these ! Undefined control sequence. l.22424 ...y setting the environment variable \env {R\_GC\_MEM\_GROW} to ! Undefined control sequence. l.22430 ... numbers and megabytes) by typing \code {\LinkA{gc}{gc}()} at the ! Undefined control sequence. l.22430 ...s and megabytes) by typing \code{\LinkA {gc}{gc}()} at the ! Undefined control sequence. l.22431 \R {} prompt. Note that following \code{\LinkA{gcinfo}{gcinfo}(TRUE)... ! Undefined control sequence. l.22431 \R{} prompt. Note that following \code {\LinkA{gcinfo}{gcinfo}(TRUE)... ! Undefined control sequence. l.22431 ...ompt. Note that following \code{\LinkA {gcinfo}{gcinfo}(TRUE)}, a... ! Undefined control sequence. l.22434 The command-line option \option {--max-ppsize} controls the maximum ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22441 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22443 \begin{SeeAlso} \relax ! Undefined control sequence. l.22446 \code {\LinkA{Memory-limits}{Memory.Rdash.limits}} for the design lim... ! Undefined control sequence. l.22446 \code{\LinkA {Memory-limits}{Memory.Rdash.limits}} for the design lim... ! Undefined control sequence. l.22448 \code {\LinkA{gc}{gc}} for information on the garbage collector and t... ! Undefined control sequence. l.22448 \code{\LinkA {gc}{gc}} for information on the garbage collector and t... ! Undefined control sequence. l.22449 memory usage, \code {\LinkA{object.size}{object.size}(a)} for the (a... ! Undefined control sequence. l.22449 memory usage, \code{\LinkA {object.size}{object.size}(a)} for the (a... ! Undefined control sequence. l.22450 size of \R {} object \code{a}. \code{\LinkA{memory.profile}{memory.p... ! Undefined control sequence. l.22450 size of \R{} object \code {a}. \code{\LinkA{memory.profile}{memory.p... ! Undefined control sequence. l.22450 size of \R{} object \code{a}. \code {\LinkA{memory.profile}{memory.p... ! Undefined control sequence. l.22450 ... of \R{} object \code{a}. \code{\LinkA {memory.profile}{memory.pr... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22452 \end{SeeAlso} ! Undefined control sequence. l.22453 \HeaderA {Memory-limits}{Memory Limits in R}{Memory.Rdash.limits} ! Undefined control sequence. l.22454 \keyword {environment}{Memory-limits} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22456 \begin{Description} \relax ! Undefined control sequence. l.22457 \R {} holds objects it is using in virtual memory. This help file ! Undefined control sequence. l.22459 ... between 32-bit and 64-bit builds of \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22460 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for e [14xplanation. Type H for immediate help. ... l.22462 \begin{Details} \relax ! Undefined control sequence. l.22463 Currently \R {} runs on 32- and 64-bit operating systems, and most 64... ! Undefined control sequence. l.22465 32- or 64-bit builds of \R {}. The memory limits depends mainly on the ! Undefined control sequence. l.22466 build, but for a 32-bit build of \R {} on Windows they also depend on... Underfull \hbox (badness 1490) in paragraph at lines 22448--22468 \OT1/cmr/m/n/10 limitsMemory Lim-its in RMem-ory.Rdash.limits environmentMemory -limits [218]] Chapter 4 [15] ! Undefined control sequence. l.22469 \R {} holds all objects in virtual memory, and there are limits based... ! Undefined control sequence. l.22474 cons cells allowed -- see \code {\LinkA{Memory}{Memory}} -- but these... ! Undefined control sequence. l.22474 cons cells allowed -- see \code{\LinkA {Memory}{Memory}} -- but these... ! Undefined control sequence. l.22477 process such as the \R {} executable. This is system-specific, and can ! Undefined control sequence. l.22480 ...single process: Windows' versions of \R {} do so directly. ! Undefined control sequence. l.22484 Error messages beginning \code {cannot allocate vector of size} ! Undefined control sequence. l.22493 the error message begins \code {cannot allocate vector of length}. ! Undefined control sequence. l.22495 \eqn {2^{31} - 1 \approx 2\thinspace 10^9}{}, ! Missing $ inserted. $ l.22495 \eqn{2^ {31} - 1 \approx 2\thinspace 10^9}{}, ! Extra }, or forgotten $. l.22495 \eqn{2^{31} - 1 \approx 2\thinspace 10^9} {}, ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22497 \end{Details} ! Missing $ inserted. $ l.22497 \end{Details} ! Missing } inserted. } l.22497 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22499 \begin{Section} {Unix} ! Undefined control sequence. l.22506 .../shell's help on commands such as \code {limit} or ! Undefined control sequence. l.22507 \code {ulimit} for how to impose limitations on the resources available ! Undefined control sequence. l.22508 ...single process. For example a \command {bash} user could use ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22509 \begin{alltt} ulimit -t 600 -v 4000000 ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22510 \end{alltt} ! Undefined control sequence. l.22512 whereas a \command {csh} user might use ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22513 \begin{alltt} limit cputime 10m ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22515 \end{alltt} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22520 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22522 \begin{Section} {Windows} ! Undefined control sequence. l.22525 \url {https://www.microsoft.com/whdc/system/platform/server/PAE/PAEme... ! Undefined control sequence. l.22527 \url {https://msdn.microsoft.com/en-us/library/bb613473(VS.85).aspx}. ! Undefined control sequence. l.22529 of \R {} is 4Gb: for the oldest ones it is 2Gb. The limit for a 64-bit ! Undefined control sequence. l.22530 build of \R {} (imposed by the OS) is 8Tb. Overfull \hbox (8.77855pt too wide) in paragraph at lines 22517--22531 \OT1/cmr/m/n/10 https://www.microsoft.com/whdc/system/platform/server/PAE/PAEme m.mspx ! Undefined control sequence. l.22533 vector in a 32-bit build of \R {} even on 64-bit Windows because of ! Undefined control sequence. l.22536 Under Windows, \R {} imposes limits on the total memory allocation ! Undefined control sequence. l.22538 \code {\LinkA{memory.size}{memory.size}} and \code{\LinkA{memory.limi... ! Undefined control sequence. l.22538 \code{\LinkA {memory.size}{memory.size}} and \code{\LinkA{memory.limi... ! Undefined control sequence. l.22538 ...kA{memory.size}{memory.size}} and \code {\LinkA{memory.limit}{memo... ! Undefined control sequence. l.22538 ...ry.size}{memory.size}} and \code{\LinkA {memory.limit}{memory.limi... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22539 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22541 \begin{SeeAlso} \relax ! Undefined control sequence. l.22542 \code {\LinkA{object.size}{object.size}(a)} for the (approximate) siz... ! Undefined control sequence. l.22542 \code{\LinkA {object.size}{object.size}(a)} for the (approximate) siz... ! Undefined control sequence. l.22542 ...e}(a)} for the (approximate) size of \R {} object ! Undefined control sequence. l.22543 \code {a}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22544 \end{SeeAlso} ! Undefined control sequence. l.22545 \HeaderA {memory.profile}{Profile the Usage of Cons Cells}{memory.pro... ! Undefined control sequence. l.22546 \keyword {utilities}{memory.profile} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22548 \begin{Description} \relax ! Undefined control sequence. l.22549 Lists the usage of the cons cells by \code {SEXPREC} type. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22550 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22552 \begin{Usage} [219 [16] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22556 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22558 \begin{Details} \relax ! Undefined control sequence. l.22560 \file {Rinternals.h}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22561 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22563 \begin{Value} ! Undefined control sequence. l.22564 ... counts, named by the types. See \code {\LinkA{typeof}{typeof}} for ! Undefined control sequence. l.22564 ..., named by the types. See \code{\LinkA {typeof}{typeof}} for ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22566 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22568 \begin{SeeAlso} \relax ! Undefined control sequence. l.22569 \code {\LinkA{gc}{gc}} for the overall usage of cons cells. ! Undefined control sequence. l.22569 \code{\LinkA {gc}{gc}} for the overall usage of cons cells. ! Undefined control sequence. l.22570 \code {\LinkA{Rprofmem}{Rprofmem}} and \code{\LinkA{tracemem}{traceme... ! Undefined control sequence. l.22570 \code{\LinkA {Rprofmem}{Rprofmem}} and \code{\LinkA{tracemem}{traceme... ! Undefined control sequence. l.22570 ...e{\LinkA{Rprofmem}{Rprofmem}} and \code {\LinkA{tracemem}{tracemem... ! Undefined control sequence. l.22570 ...A{Rprofmem}{Rprofmem}} and \code{\LinkA {tracemem}{tracemem}} allo... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22572 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22574 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22575 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.22578 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22579 \end{Examples} ! Undefined control sequence. l.22580 \HeaderA {merge}{Merge Two Data Frames}{merge} ! Undefined control sequence. l.22581 \methaliasA {merge.data.frame}{merge}{merge.data.frame} ! Undefined control sequence. l.22582 \methaliasA {merge.default}{merge}{merge.default} ! Undefined control sequence. l.22583 \keyword {array}{merge} ! Undefined control sequence. l.22584 \keyword {manip}{merge} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22586 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22589 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22591 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 22577--22592 []\OT1/cmr/m/n/10 memory.profile() merge-Merge Two Data Frames-merge Underfull \hbox (badness 10000) in paragraph at lines 22577--22592 \OT1/cmr/m/n/10 merge.data.framemergemerge.data.frame merge.defaultmergemerge.d efault Overfull \hbox (1.49698pt too wide) in paragraph at lines 22603--22603 [] \OT1/cmtt/m/n/10 by.x = by, by.y = by, all = FALSE, all.x = all, all.y = all,[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22604 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22606 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22607 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22608 \item[\code{x, y}] data frames, or objects to be coerced to one. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22609 \item[\code{by, by.x, by.y}] specifications of the columns used for ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22611 \item[\code{all}] logical; \code{all = L} is shorthand for \code{all... ! Undefined control sequence. l.22611 \item[\code{all}] logical; \code {all = L} is shorthand for \code{all... ! Undefined control sequence. l.22611 ...; \code{all = L} is shorthand for \code {all.x = L} and ! Undefined control sequence. l.22612 \code {all.y = L}, where \code{L} is either \code{\LinkA{TRUE}{TRUE}} or ! Undefined control sequence. l.22612 \code{all.y = L}, where \code {L} is either \code{\LinkA{TRUE}{TRUE}} or ! Undefined control sequence. l.22612 ....y = L}, where \code{L} is either \code {\LinkA{TRUE}{TRUE}} or ! Undefined control sequence. l.22612 ..., where \code{L} is either \code{\LinkA {TRUE}{TRUE}} or ! Undefined control sequence. l.22613 \code {FALSE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22614 \item[\code{all.x}] logical; if \code{TRUE}, then extra rows will be... ! Undefined control sequence. l.22614 \item[\code{all.x}] logical; if \code {TRUE}, then extra rows will be... ! Undefined control sequence. l.22615 the output, one for each row in \code {x} that has no matching row in ! Undefined control sequence. l.22616 \code {y}. These rows will have \code{NA}s in those columns that are ! Undefined control sequence. l.22616 \code{y}. These rows will have \code {NA}s in those columns that are ! Undefined control sequence. l.22617 usually filled with values from \code {y}. The default is ! Undefined control sequence. l.22618 \code {FALSE}, so that only rows with data from both \code{x} and ! Undefined control sequence. l.22618 ...hat only rows with data from both \code {x} and ! Undefined control sequence. l.22619 \code {y} are included in the output. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22620 \item[\code{all.y}] logical; analogous to \code{all.x}. ! Undefined control sequence. l.22620 ...ode{all.y}] logical; analogous to \code {all.x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22621 \item[\code{sort}] logical. Should the result be sorted on the \cod... ! Undefined control sequence. l.22621 ...hould the result be sorted on the \code {by} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22623 \item[\code{suffixes}] a character vector of length 2 specifying the... ! Undefined control sequence. l.22625 ...ot used for merging (appearing in \code {by} etc). ! LaTeX Error: Lonely \item--perhaps a m Chapter 5 [17issing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22626 \item[\code{incomparables}] values which cannot be matched. See ! Undefined control sequence. l.22627 \code {\LinkA{match}{match}}. This is intended to be used for mergin... ! Undefined control sequence. l.22627 \code{\LinkA {match}{match}}. This is intended to be used for mergin... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22629 \item[\code{...}] arguments to be passed to or from methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22630 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22631 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22633 \begin{Details} \relax ! Undefined control sequence. l.22634 \code {merge} is a generic function whose principal method is for data ! Undefined control sequence. l.22636 calls the \code {"data.frame"} method. ! Undefined control sequence. l.22640 \code {by.x} and \code{by.y}. The rows in the two data frames that ! Undefined control sequence. l.22640 \code{by.x} and \code {by.y}. The rows in the two data frames that ! Undefined control sequence. l.22644 \code {\LinkA{match}{match}}. ! Undefined control sequence. l.22644 \code{\LinkA {match}{match}}. [220]] ! Undefined control sequence. l.22647 vector: the name \code {"row.names"} or the number \code{0} specifies ! Undefined control sequence. l.22647 ... \code{"row.names"} or the number \code {0} specifies ! Undefined control sequence. l.22651 If \code {by} or both \code{by.x} and \code{by.y} are of length 0 (a ! Undefined control sequence. l.22651 If \code{by} or both \code {by.x} and \code{by.y} are of length 0 (a ! Undefined control sequence. l.22651 If \code{by} or both \code{by.x} and \code {by.y} are of length 0 (a ! Undefined control sequence. l.22652 length zero vector or \code {NULL}), the result, \code{r}, is the ! Undefined control sequence. l.22652 ...ctor or \code{NULL}), the result, \code {r}, is the ! Undefined control sequence. l.22653 \emph{Cartesian product} of \code {x} and \code{y}, i.e., ! Undefined control sequence. l.22653 ...artesian product} of \code{x} and \code {y}, i.e., ! Undefined control sequence. l.22654 \code {dim(r) = c(nrow(x)*nrow(y), ncol(x) + ncol(y))}. ! Undefined control sequence. l.22656 If \code {all.x} is true, all the non matching cases of \code{x} are ! Undefined control sequence. l.22656 ...ue, all the non matching cases of \code {x} are ! Undefined control sequence. l.22657 appended to the result as well, with \code {NA} filled in the ! Undefined control sequence. l.22658 corresponding columns of \code {y}; analogously for \code{all.y}. ! Undefined control sequence. l.22658 ...mns of \code{y}; analogously for \code {all.y}. ! Undefined control sequence. l.22661 names, these have \code {suffixes} (\code{".x"} and \code{".y"} by ! Undefined control sequence. l.22661 names, these have \code{suffixes} (\code {".x"} and \code{".y"} by ! Undefined control sequence. l.22661 ... \code{suffixes} (\code{".x"} and \code {".y"} by ! Undefined control sequence. l.22669 ...terminology, the default value of \code {all = FALSE} ! Undefined control sequence. l.22671 join}. Specifying \code {all.x = TRUE} gives a \emph{left (outer) ! Undefined control sequence. l.22672 join}, \code {all.y = TRUE} a \emph{right (outer) join}, and both ! Undefined control sequence. l.22673 (\code {all = TRUE} a \emph{(full) outer join}. DBMSes do not match ! Undefined control sequence. l.22674 \code {NULL} records, equivalent to \code{incomparables = NA} in \R{}. ! Undefined control sequence. l.22674 \code{NULL} records, equivalent to \code {incomparables = NA} in \R{}. ! Undefined control sequence. l.22674 ...lent to \code{incomparables = NA} in \R {}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22675 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22677 \begin{Value} ! Undefined control sequence. l.22679 common columns, but for \code {sort = FALSE} are in an unspecified or... ! Undefined control sequence. l.22681 remaining columns in \code {x} and then those in \code{y}. If the ! Undefined control sequence. l.22681 ...mns in \code{x} and then those in \code {y}. If the ! Undefined control sequence. l.22683 \code {Row.names} is added at the left, and in all cases the result has ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22685 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22687 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22694 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22696 \begin{SeeAlso} \relax ! Undefined control sequence. l.22697 \code {\LinkA{data.frame}{data.frame}}, ! Undefined control sequence. l.22697 \code{\LinkA {data.frame}{data.frame}}, ! Undefined control sequence. l.22698 \code {\LinkA{by}{by}}, ! Undefined control sequence. l.22698 \code{\LinkA {by}{by}}, ! Undefined control sequence. l.22699 \code {\LinkA{cbind}{cbind}}. ! Undefined control sequence. l.22699 \code{\LinkA {cbind}{cbind}}. ! Undefined control sequence. l.22701 \code {\LinkA{dendrogram}{dendrogram}} for a class which has a \code{... ! Undefined control sequence. l.22701 \code{\LinkA {dendrogram}{dendrogram}} for a class which has a \code{... ! Undefined control sequence. l.22701 ...drogram}} for a class which has a \code {merge} method. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22702 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22704 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22705 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.22706 # # use character columns of names to get sensible sort order ! You can't use `macro parameter character #' in horizontal mode. l.22706 ## use character columns of names to get sensible sort order ! Misplaced alignment tab character &. l.22721 "Venables & Smith")) Underfull \hbox (badness 1616) in paragraph at lines 22723--22728 []\OT1/cmr/m/n/10 (m1 <- merge(authors, books, by.x = "sur-name", by.y = "name" )) Underfull \hbox (badness 4120) in paragraph at lines 22723--22728 \OT1/cmr/m/n/10 (m2 <- merge(books, au-thors, by.x = "name", by.y = "sur-name") ) ! You can't use `macro parameter character #' in vertical mode. l.22729 # # "R core" is missing from authors and appears only here : ! You can't use `macro parameter character #' in vertical mode. l.22729 ## "R core" is missing from authors and appears only here : ! You can't use `macro parameter character #' in vertical mode. l.22732 # # example of using 'incomparables' ! You can't use `macro parameter character #' in vertical mode. l.22732 ## example of using 'incomparables' ! You can't use `macro parameter character #' in horizontal mode. l.22735 merge(x, y, by = c("k1","k2")) # NA's match ! You can't use `macro parameter character #' in horizontal mode. l.22736 merge(x, y, by = "k1") # NA's match, so 6 rows ! You can't use `macro parameter character #' in horizontal mode. l.22737 ...(x, y, by = "k2", incomparables = NA) # 2 rows ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22738 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22739 \end{Examples} ! Undefined control sequence. l.22740 \HeaderA {message}{Diagnostic Messages}{message} ! Undefined control sequence. l.22741 \aliasA {.makeMessage}{message}{.makeMessage} ! Undefined control sequence. l.22742 \aliasA {.packageStartupMessage}{message}{.packageStartupMessage} ! Undefined control sequence. l.22743 \aliasA {packageStartupMessage}{message}{packageStartupMessage} ! Undefined control sequence. l.22744 \aliasA {suppressMessages}{message}{suppressMessages} ! Undefined control sequence. l.22745 \aliasA {suppressPackageStartupMessages}{message}{suppressPackageStar... ! Undefined control sequence. l.22746 \keyword {programming}{message} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22748 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22750 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22752 \begin{Usage} Underfull \hbox (badness 2970) in paragraph at lines 22732--22753 \OT1/cmr/m/n/10 k2 = c(NA,NA,3,4,5), data = 1:5) merge(x, y, by = c("k1","k2")) Underfull \hbox (badness 3668) in paragraph at lines 22732--22753 \OT1/cmr/m/n/10 y, by = "k2", in-com-pa-ra-bles = NA) 2 rows mes-sage-Di-ag- nos- [221 [18]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22762 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22764 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22765 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22766 \item[\code{...}] zero or more objects which can be coerced to chara... ! Undefined control sequence. l.22768 \code {message} only) a single condition object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22769 \item[\code{domain}] see \code{\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.22769 \item[\code{domain}] see \code {\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.22769 \item[\code{domain}] see \code{\LinkA {gettext}{gettext}}. If \code{... ! Undefined control sequence. l.22769 ...de{\LinkA{gettext}{gettext}}. If \code {NA}, messages will ! Undefined control sequence. l.22770 ... translated, see also the note in \code {\LinkA{stop}{stop}}. ! Undefined control sequence. l.22770 ...ated, see also the note in \code{\LinkA {stop}{stop}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22771 \item[\code{appendLF}] logical: should messages given as a character... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22773 \item[\code{expr}] expression to evaluate. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22774 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22775 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22777 \begin{Details} \relax ! Undefined control sequence. l.22778 \code {message} is used for generating `simple' diagnostic ! Undefined control sequence. l.22783 \code {\LinkA{stderr}{stderr}()} \LinkA{connection}{connection}. ! Undefined control sequence. l.22783 \code{\LinkA {stderr}{stderr}()} \LinkA{connection}{connection}. ! Undefined control sequence. l.22783 \code{\LinkA{stderr}{stderr}()} \LinkA {connection}{connection}. ! Undefined control sequence. l.22785 ... condition object is supplied to \code {message} it should be ! Undefined control sequence. l.22788 ...the message is being processed, a \code {muffleMessage} restart ! Undefined control sequence. l.22791 \code {suppressMessages} evaluates its expression in a context that ! Undefined control sequence. l.22794 \code {packageStartupMessage} is a variant whose messages can be ! Undefined control sequence. l.22795 suppressed separately by \code {suppressPackageStartupMessages}. (They ! Undefined control sequence. l.22796 ...messages, so can be suppressed by \code {suppressMessages}.) ! Undefined control sequence. l.22798 \code {.makeMessage} is a utility used by \code{message}, \code{warning} ! Undefined control sequence. l.22798 ...makeMessage} is a utility used by \code {message}, \code{warning} ! Undefined control sequence. l.22798 ...a utility used by \code{message}, \code {warning} ! Undefined control sequence. l.22799 and \code {stop} to generate a text message from the \code{...} ! Undefined control sequence. l.22799 ... generate a text message from the \code {...} ! Undefined control sequence. l.22800 ...ents by possible translation (see \code {\LinkA{gettext}{gettext}}... ! Undefined control sequence. l.22800 ... possible translation (see \code{\LinkA {gettext}{gettext}}) and ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22802 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22804 \begin{SeeAlso} \relax ! Undefined control sequence. l.22805 \code {\LinkA{warning}{warning}} and \code{\LinkA{stop}{stop}} for ge... ! Undefined control sequence. l.22805 \code{\LinkA {warning}{warning}} and \code{\LinkA{stop}{stop}} for ge... ! Undefined control sequence. l.22805 \code{\LinkA{warning}{warning}} and \code {\LinkA{stop}{stop}} for ge... ! Undefined control sequence. l.22805 ...nkA{warning}{warning}} and \code{\LinkA {stop}{stop}} for generati... ! Undefined control sequence. l.22806 and errors; \code {\LinkA{conditions}{conditions}} for condition hand... ! Undefined control sequence. l.22806 and errors; \code{\LinkA {conditions}{conditions}} for condition hand... ! Undefined control sequence. l.22809 \code {\LinkA{gettext}{gettext}} for the mechanisms for the automated... ! Undefined control sequence. l.22809 \code{\LinkA {gettext}{gettext}} for the mechanisms for the automated... [19 ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22811 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22813 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22814 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22828 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22829 \end{Examples} ! Undefined control sequence. l.22830 \HeaderA {missing}{Does a Formal Argument have a Value?}{missing} ! Undefined control sequence. l.22831 \keyword {programming}{missing} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22833 \begin{Description} \relax ! Undefined control sequence. l.22834 \code {missing} can be used to test whether a value was specified ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22836 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22838 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 22825--22839 []\OT1/cmr/m/n/10 testit() sup-press-Pack-ageS-tar-tupMes-sages(testit()) sup-p ressMes- Underfull \hbox (badness 1242) in paragraph at lines 22825--22839 \OT1/cmr/m/n/10 sages(testit()) miss-ing-Does a For-mal Ar-gu-ment have a Val ue?missing ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22842 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22844 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22845 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22846 \item[\code{x}] a formal argument. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22847 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22848 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22850 \begin{Details} \relax ! Undefined control sequence. l.22851 \code {missing(x)} is only reliable if \code{x} has not been altered ! Undefined control sequence. l.22851 ...e{missing(x)} is only reliable if \code {x} has not been altered ! Undefined control sequence. l.22853 be false after \code {x <- match.arg(x)}. [222] ! Undefined control sequence. l.22860 Currently \code {missing} can only be used in the immediate body of ! Undefined control sequence. l.22862 function or a \code {local} call. This may change in the future. ! Undefined control sequence. l.22864 This is a `special' \LinkA {primitive}{primitive} function: it must not ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22866 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22868 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22876 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22878 \begin{SeeAlso} \relax ! Undefined control sequence. l.22879 \code {\LinkA{substitute}{substitute}} for argument expression; ! Undefined control sequence. l.22879 \code{\LinkA {substitute}{substitute}} for argument expression; ! Undefined control sequence. l.22880 \code {\LinkA{NA}{NA}} for missing values in data. ! Undefined control sequence. l.22880 \code{\LinkA {NA}{NA}} for missing values in data. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22881 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22883 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22884 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22892 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22893 \end{Examples} ! Undefined control sequence. l.22894 \HeaderA {mode}{The (Storage) Mode of an Object}{mode} ! Undefined control sequence. l.22895 \aliasA {mode<\Rdash{}}{mode}{mode<.Rdash.} ! Undefined control sequence. l.22895 \aliasA{mode<\Rdash {}}{mode}{mode<.Rdash.} ! Undefined control sequence. l.22896 \aliasA {storage.mode}{mode}{storage.mode} ! Undefined control sequence. l.22897 \aliasA {storage.mode<\Rdash{}}{mode}{storage.mode<.Rdash.} ! Undefined control sequence. l.22897 \aliasA{storage.mode<\Rdash {}}{mode}{storage.mode<.Rdash.} ! Undefined control sequence. l.22898 \keyword {attribute}{mode} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22900 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22902 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22904 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22911 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22913 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22914 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22915 \item[\code{x}] any \R{} object. ! Undefined control sequence. l.22915 \item[\code{x}] any \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22916 \item[\code{value}] a character string giving the desired mode or ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22918 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22919 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22921 \begin{Details} \relax ! Undefined control sequence. l.22922 Both \code {mode} and \code{storage.mode} return a character string ! Undefined control sequence. l.22922 Both \code{mode} and \code {storage.mode} return a character string ! Undefined control sequence. l.22924 relying on the output of \code [20 {\LinkA{typeof}{typeof}(x)}, see the e... ! Undefined control sequence. l.22924 relying on the output of \code{\LinkA {typeof}{typeof}(x)}, see the e... ! Undefined control sequence. l.22927 \code {mode(x) <- "newmode"} changes the \code{mode} of object \code{... ! Undefined control sequence. l.22927 ...mode(x) <- "newmode"} changes the \code {mode} of object \code{x} to ! Undefined control sequence. l.22927 ...changes the \code{mode} of object \code {x} to ! Undefined control sequence. l.22928 \code {newmode}. This is only supported if there is an appropriate ! Undefined control sequence. l.22929 \code {as.newmode} function, for example ! Undefined control sequence. l.22930 \code {"logical"}, \code{"integer"}, \code{"double"}, \code{"complex"}, ! Undefined control sequence. l.22930 \code{"logical"}, \code {"integer"}, \code{"double"}, \code{"complex"}, ! Undefined control sequence. l.22930 \code{"logical"}, \code{"integer"}, \code {"double"}, \code{"complex"}, ! Undefined control sequence. l.22930 ...code{"integer"}, \code{"double"}, \code {"complex"}, ! Undefined control sequence. l.22931 \code {"raw"}, \code{"character"}, \code{"list"}, \code{"expression"}, ! Undefined control sequence. l.22931 \code{"raw"}, \code {"character"}, \code{"list"}, \code{"expression"}, ! Undefined control sequence. l.22931 \code{"raw"}, \code{"character"}, \code {"list"}, \code{"expression"}, ! Undefined control sequence. l.22931 ...code{"character"}, \code{"list"}, \code {"expression"}, ! Undefined control sequence. l.22932 \code {"name"}, \code{"symbol"} and \code{"function"}. Attributes are ! Undefined control sequence. l.22932 \code{"name"}, \code {"symbol"} and \code{"function"}. Attributes are ! Undefined control sequence. l.22932 \code{"name"}, \code{"symbol"} and \code {"function"}. Attributes are ! Undefined control sequence. l.22935 \code {storage.mode(x) <- "newmode"} is a more efficient \LinkA{primi... ! Undefined control sequence. l.22935 ...- "newmode"} is a more efficient \LinkA {primitive}{primitive} ! Undefined control sequence. l.22936 version of \code {mode<-}, which works for \code{"newmode"} which is ! Undefined control sequence. l.22936 ...of \code{mode<-}, which works for \code {"newmode"} which is ! Undefined control sequence. l.22937 one of the internal types (see \code {\LinkA{typeof}{typeof}}), but n... ! Undefined control sequence. l.22937 ...of the internal types (see \code{\LinkA {typeof}{typeof}}), but no... ! Undefined control sequence. l.22938 \code {"single"}. Attributes are preserved. ! Undefined control sequence. l.22940 As storage mode \code {"single"} is only a pseudo-mode in \R{}, it will ! Undefined control sequence. l.22940 ...e{"single"} is only a pseudo-mode in \R {}, it will ! Undefined control sequence. l.22941 not be reported by \code {mode} or \code{storage.mode}: use ! Undefined control sequence. l.22941 not be reported by \code{mode} or \code {storage.mode}: use ! Undefined control sequence. l.22942 \code {attr(object, "Csingle")} to examine this. However, ! Undefined control sequence. l.22943 \code {mode<-} can be used to set the mode to \code{"single"}, ! Undefined control sequence. l.22943 ...-} can be used to set the mode to \code {"single"}, ! Undefined control sequence. l.22944 which sets the real mode to \code {"double"} and the \code{"Csingle"} ! Undefined control sequence. l.22944 ...l mode to \code{"double"} and the \code {"Csingle"} ! Undefined control sequence. l.22945 attribute to \code {TRUE}. Setting any other mode will remove this ! Undefined control sequence. l.22948 ...(in the examples below) that some \code {\LinkA{call}{call}}s have... ! Undefined control sequence. l.22948 ... examples below) that some \code{\LinkA {call}{call}}s have mode ! Undefined control sequence. l.22949 \code {"("} which is S compatible. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22950 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22952 \begin{Section} {Mode names} ! Undefined control sequence. l.22953 ...e same set of names as types (see \code {\LinkA{typeof}{typeof}}) ! Undefined control sequence. l.22953 ...set of names as types (see \code{\LinkA {typeof}{typeof}}) ! Undefined control sequence. l.22957 \item types \code {"integer"} and \code{"double"} are ! Undefined control sequence. l.22957 \item types \code{"integer"} and \code {"double"} are ! Undefined control sequence. l.22958 returned as \code {"numeric"}. ! Undefined control sequence. l.22959 \item types \code {"special"} and \code{"builtin"} are returned as ! Undefined control sequence. l.22959 \item types \code{"special"} and \code {"builtin"} are returned as ! Undefined control sequence. l.22960 \code {"function"}. ! Undefined control sequence. l.22961 \item type \code {"symbol"} is called mode \code{"name"}. ! Undefined control sequence. l.22961 ...pe \code{"symbol"} is called mode \code {"name"}. ! Undefined control sequence. l.22962 \item type \code {"language"} is returned as \code{"("} or \code{"cal... ! Undefined control sequence. l.22962 ... \code{"language"} is returned as \code {"("} or \code{"call"}. ! Undefined control sequence. l.22962 ...ge"} is returned as \code{"("} or \code {"call"}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22966 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22968 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate hel]p. ... l.22972 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22974 \begin{SeeAlso} \relax ! Undefined control sequence. l.22975 \code {\LinkA{typeof}{typeof}} for the R-internal `mode', ! Undefined control sequence. l.22975 \code{\LinkA {typeof}{typeof}} for the R-internal `mode', ! Undefined control sequence. l.22976 \code {\LinkA{attributes}{attributes}}. ! Undefined control sequence. l.22976 \code{\LinkA {attributes}{attributes}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22977 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22979 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22980 \begin{ExampleCode} [223] Underfull \hbox (badness 5231) in paragraph at lines 22985--22994 []\OT1/cmr/m/n/10 cex3 <- c("NULL", "1", "1:1", "1i", "list(1)", "data.frame(x = Underfull \hbox (badness 2762) in paragraph at lines 22985--22994 \OT1/cmr/m/n/10 1)", "pairlist(pi)", "c", "lm", "for-mals(lm)[[1]]", "for-mals( lm)[[2]]", "y ! You can't use `macro parameter character #' in vertical mode. l.22995 # # This also makes a local copy of 'pi': ! You can't use `macro parameter character #' in vertical mode. l.22995 ## This also makes a local copy of 'pi': ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.22999 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23000 \end{Examples} ! Undefined control sequence. l.23001 \HeaderA {NA}{`Not Available' / Missing Values}{NA} ! Undefined control sequence. l.23002 \aliasA {anyMissing}{NA}{anyMissing} ! Undefined control sequence. l.23003 \aliasA {anyNA}{NA}{anyNA} ! Undefined control sequence. l.23004 \aliasA {is.na}{NA}{is.na} ! Undefined control sequence. l.23005 \methaliasA {is.na.data.frame}{NA}{is.na.data.frame} ! Undefined control sequence. l.23006 \aliasA {is.na<\Rdash{}}{NA}{is.na<.Rdash.} ! Undefined control sequence. l.23006 \aliasA{is.na<\Rdash {}}{NA}{is.na<.Rdash.} ! Undefined control sequence. l.23007 \methaliasA {is.na<\Rdash{}.default}{NA}{is.na<.Rdash..default} ! Undefined control sequence. l.23007 \methaliasA{is.na<\Rdash {}.default}{NA}{is.na<.Rdash..default} ! Undefined control sequence. l.23008 \aliasA {NA\_character\_}{NA}{NA.Rul.character.Rul.} ! Undefined control sequence. l.23009 \aliasA {NA\_complex\_}{NA}{NA.Rul.complex.Rul.} ! Undefined control sequence. l.23010 \aliasA {NA\_integer\_}{NA}{NA.Rul.integer.Rul.} ! Undefined control sequence. l.23011 \aliasA {NA\_real\_}{NA}{NA.Rul.real.Rul.} ! Undefined control sequence. l.23012 \keyword {NA}{NA} ! Undefined control sequence. l.23013 \keyword {logic}{NA} ! Undefined control sequence. l.23014 \keyword {manip}{NA} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23016 \begin{Description} \relax ! Undefined control sequence. l.23017 \code {NA} is a logical constant of length 1 which contains a missing ! Undefined control sequence. l.23018 value indicator. \code {NA} can be coerced to any other vector ! Undefined control sequence. l.23019 ...pt raw. There are also constants \code {NA\_integer\_}, ! Undefined control sequence. l.23020 \code {NA\_real\_}, \code{NA\_complex\_} and \code{NA\_character\_} o... ! Undefined control sequence. l.23020 \code{NA\_real\_}, \code {NA\_complex\_} and \code{NA\_character\_} o... ! Undefined control sequence. l.23020 ...real\_}, \code{NA\_complex\_} and \code {NA\_character\_} of the ! Undefined control sequence. l.23022 are \LinkA {reserved}{reserved} words in the \R{} language. ! Undefined control sequence. l.23022 ...nkA{reserved}{reserved} words in the \R {} language. Underfull \hbox (badness 10000) in paragraph at lines 22995--23023 []\OT1/cmr/m/n/10 This also makes a lo-cal copy of 'pi': stor-age.mode(pi) Underfull \hbox (badness 10000) in paragraph at lines 22995--23023 \OT1/cmr/m/n/10 <- "com-plex" stor-age.mode(pi) rm(pi) NA`Not Avail-able' / Underfull \hbox (badness 10000) in paragraph at lines 22995--23023 \OT1/cmr/m/n/10 Miss-ing Val-uesNA anyMiss-ing-NAanyMiss-ing any-NANAanyNA Underfull \hbox (badness 10000) in paragraph at lines 22995--23023 \OT1/cmr/m/n/10 is.naNAis.na is.na.data.frameNAis.na.data.frame is.na for immediate help. ... l.23030 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23032 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23043 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23045 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23046 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23047 \item[\code{x}] an \R{} object to be tested: the default method for ! Undefined control sequence. l.23047 \item[\code{x}] an \R {} object to be tested: the default method for ! Undefined control sequence. l.23048 \code {is.na} handles atomic vectors, lists and pairlists: that for ! Undefined control sequence. l.23049 \code {anyNA} also handles \code{NULL}. ! Undefined control sequence. l.23049 \code{anyNA} also handles \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23050 \item[\code{recursive}] logical: should \code{anyNA} be applied recu... ! Undefined control sequence. l.23050 ...\code{recursive}] logical: should \code {anyNA} be applied recursi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23052 \item[\code{value}] a suitable index vector for use with \code{x}. ! Undefined control sequence. l.23052 ...uitable index vector for use with \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23053 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23054 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23056 \begin{Details} \relax ! Undefined control sequence. l.23057 The \code {NA} of character type is distinct from the string ! Undefined control sequence. l.23058 \code {"NA"}. Programmers who need to specify an explicit missing ! Undefined control sequence. l.23059 string should use \code {NA\_character\_} (rather than \code{"NA"}) o... ! Undefined control sequence. l.23059 ...ode{NA\_character\_} (rather than \code {"NA"}) or set ! Undefined control sequence. l.23060 elements to \code {NA} using \code{is.na<-}. ! Undefined control sequence. l.23060 elements to \code{NA} using \code {is.na<-}. ! Undefined control sequence. l.23062 \code {is.na} and \code{anyNA} are generic: you can write ! Undefined control sequence. l.23062 \code{is.na} and \code {anyNA} are generic: you can write ! Undefined control sequence. l.23064 \LinkA {InternalMethods}{InternalMethods}. ! Undefined control sequence. l.23066 Function \code {is.na<-} may provide a safer way to set missingness. ! Undefined control sequence. l.23069 Numerical computations using \code {NA} will normally result in ! Undefined control sequence. l.23070 \code {NA}: a possible exception is where \code{\LinkA{NaN}{NaN}} is ... ! Undefined control sequence. l.23070 ...A}: a possible exception is where \code {\LinkA{NaN}{NaN}} is also ! Undefined control sequence. l.23070 ...ossible exception is where \code{\LinkA {NaN}{NaN}} is also ! Undefined control sequence. l.23072 the \R {} platform). Logical computations treat \code{NA} as a missing ! Undefined control sequence. l.23072 ...orm). Logical computations treat \code {NA} as a missing ! Undefined control sequence. l.23073 \code {TRUE/FALSE} value, and so may return \code{TRUE} or \code{FALSE} ! Undefined control sequence. l.23073 ...E/FALSE} value, and so may retur [21n \code {TRUE} or \code{FALSE} ! Undefined control sequence. l.23073 ... and so may return \code{TRUE} or \code {FALSE} ! Undefined control sequence. l.23074 ...expression does not depend on the \code {NA} operand. [224]] ! Undefined control sequence. l.23076 The default method for \code {anyNA} handles atomic vectors without a ! Undefined control sequence. l.23077 class and \code {NULL}. It calls \code{any(is.na(x)} on objects with ! Undefined control sequence. l.23077 class and \code{NULL}. It calls \code {any(is.na(x)} on objects with ! Undefined control sequence. l.23078 classes and for \code {recursive = FALSE}, on lists and pairlists. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23079 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23081 \begin{Value} ! Undefined control sequence. l.23082 The default method for \code {is.na} applied to an atomic vector ! Undefined control sequence. l.23083 ...f the same length as its argument \code {x}, ! Undefined control sequence. l.23084 containing \code {TRUE} for those elements marked \code{NA} or, for ! Undefined control sequence. l.23084 ...e{TRUE} for those elements marked \code {NA} or, for ! Undefined control sequence. l.23085 numeric or complex vectors, \code {\LinkA{NaN}{NaN}}, and \code{FALSE} ! Undefined control sequence. l.23085 numeric or complex vectors, \code{\LinkA {NaN}{NaN}}, and \code{FALSE} ! Undefined control sequence. l.23085 ...ors, \code{\LinkA{NaN}{NaN}}, and \code {FALSE} ! Undefined control sequence. l.23086 .... (A complex value is regarded as \code {NA} if either its ! Undefined control sequence. l.23087 real or imaginary part is \code {NA} or \code{\LinkA{NaN}{NaN}}.) ! Undefined control sequence. l.23087 ...or imaginary part is \code{NA} or \code {\LinkA{NaN}{NaN}}.) ! Undefined control sequence. l.23087 ...inary part is \code{NA} or \code{\LinkA {NaN}{NaN}}.) ! Undefined control sequence. l.23088 \code {dim}, \code{dimnames} and \code{names} attributes are copied to ! Undefined control sequence. l.23088 \code{dim}, \code {dimnames} and \code{names} attributes are copied to ! Undefined control sequence. l.23088 \code{dim}, \code{dimnames} and \code {names} attributes are copied to ! Undefined control sequence. l.23092 For \code {is.na}, elementwise the result is false unless that element ! Undefined control sequence. l.23094 regarded as \code {NA} or \code{NaN} (note that any \code{is.na} ! Undefined control sequence. l.23094 regarded as \code{NA} or \code {NaN} (note that any \code{is.na} ! Undefined control sequence. l.23094 ...{NA} or \code{NaN} (note that any \code {is.na} ! Undefined control sequence. l.23096 \code {anyNA(recursive = FALSE)} works the same way as \code{is.na}; ! Undefined control sequence. l.23096 ...e = FALSE)} works the same way as \code {is.na}; ! Undefined control sequence. l.23097 \code {anyNA(recursive = TRUE)} applies \code{anyNA} (with method ! Undefined control sequence. l.23097 ...{anyNA(recursive = TRUE)} applies \code {anyNA} (with method ! Undefined control sequence. l.23100 The data frame method for \code {is.na} returns a logical matrix ! Undefined control sequence. l.23104 \code {anyNA(NULL)} is false: \code{is.na(NULL)} is \code{logical(0)} ! Undefined control sequence. l.23104 \code{anyNA(NULL)} is false: \code {is.na(NULL)} is \code{logical(0)} ! Undefined control sequence. l.23104 ...} is false: \code{is.na(NULL)} is \code {logical(0)} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23106 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23108 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23116 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23118 \begin{SeeAlso} \relax ! Undefined control sequence. l.23119 \code {\LinkA{NaN}{NaN}}, \code{\LinkA{is.nan}{is.nan}}, etc., ! Undefined control sequence. l.23119 \code{\LinkA {NaN}{NaN}}, \code{\LinkA{is.nan}{is.nan}}, etc., ! Undefined control sequence. l.23119 \code{\LinkA{NaN}{NaN}}, \code {\LinkA{is.nan}{is.nan}}, etc., ! Undefined control sequence. l.23119 \code{\LinkA{NaN}{NaN}}, \code{\LinkA {is.nan}{is.nan}}, etc., ! Undefined control sequence. l.23120 and the utility function \code {\LinkA{complete.cases}{complete.cases}}. ! Undefined control sequence. l.23120 and the utility function \code{\LinkA {complete.cases}{complete.cases}}. ! Undefined control sequence. l.23122 \code {\LinkA{na.action}{na.action}}, \code{\LinkA{na.omit}{na.omit}}... ! Undefined control sequence. l.23122 \code{\LinkA {na.action}{na.action}}, \code{\LinkA{na.omit}{na.omit}}... ! Undefined control sequence. l.23122 \code{\LinkA{na.action}{na.action}}, \code {\LinkA{na.omit}{na.omit}}... ! Undefined control sequence. l.23122 ...kA{na.action}{na.action}}, \code{\LinkA {na.omit}{na.omit}}, \code... ! Undefined control sequence. l.23122 ... \code{\LinkA{na.omit}{na.omit}}, \code {\LinkA{na.fail}{na.fail}} ! Undefined control sequence. l.23122 ...\LinkA{na.omit}{na.omit}}, \code{\LinkA {na.fail}{na.fail}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23124 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23126 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23127 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23128 is.na(c(1, NA)) # > FALSE TRUE ! You can't use `macro parameter character #' in horizontal mode. l.23129 is.na(paste(c(1, NA))) # > FALSE FALSE ! You can't use `macro parameter character #' in horizontal mode. l.23133 xx # > 0 NA 2 NA 4 ! You can't use `macro parameter character #' in horizontal mode. l.23134 anyNA(xx) # TRUE ! You can't use `macro parameter character #' in vertical mode. l.23136 # Some logical operations do not return NA ! Misplaced alignment tab character &. l.23137 c(TRUE, FALSE) & NA ! You can't use `macro parameter character #' in vertical mode. l.23141 # # Measure speed difference in a favourable case: ! You can't use `macro parameter character #' in vertical mode. l.23141 ## Measure speed difference in a favourable case: ! You can't use `macro parameter character #' in horizontal mode. l.23142 # # the difference depends on the platform, on most ca 3x. ! You can't use `macro parameter character #' in horizontal mode. l.23142 ## the difference depends on the platform, on most ca 3x. ! You can't use `macro parameter character #' in horizontal mode. l.23143 x <- 1:10000; x[5000] <- NaN # coerces x to be double ! You can't use `macro parameter character #' in horizontal mode. l.23144 if(require("microbenchmark")) { # does not work reliably on all plat... ! Missing $ inserted. $ l.23147 nSim <- 2^ 13 ! Extra }, or forgotten $. l.23150 } ! Missing $ inserted. $ l.23151 Underfull \hbox (badness 1117) in paragraph at lines 23141--23151 []\OT1/cmr/m/n/10 Measure speed dif-fer-ence in a favourable case: the dif-fer -ence de- Underfull \hbox (badness 2913) in paragraph at lines 23141--23151 \OT1/cmr/m/n/10 pends on the plat-form, on most ca 3x. x <- 1:10000; x[5000] <- Underfull \hbox (badness 3375) in paragraph at lines 23141--23151 \OT1/cmr/m/n/10 NaN co-erces x to be dou-ble if(require("microbenchmark")) d oes Underfull \hbox (badness 3690) in paragraph at lines 23141--23151 \OT1/cmr/m/n/10 not work re-li-ably on all plat-forms print(microbenchmark(any( is.na(x)), Underfull \hbox (badness 10000) in paragraph at lines 23141--23151 \OT1/cmr/m/n/10 anyNA(x))) else nSim <- 2$[]3\OML/cmm/m/it/10 print\OT1/cmr/m /n/10 (\OML/cmm/m/it/10 rbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 is:na \OT1/cmr/m /n/10 = Underfull \hbox (badness 10000) in paragraph at lines 23141--23151 \OML/cmm/m/it/10 system:time\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 replicate\OT1/cmr /m/n/10 (\OML/cmm/m/it/10 nSim; any\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 is:na\OT1/ cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 ))))\OML/cmm/m/it/10 ; anyNA \OT1 /cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.23153 # # anyNA() can work recursively with list()s: ! You can't use `macro parameter character #' in vertical mode. l.23153 ## anyNA() can work recursively with list()s: ! Missing $ inserted. $ l.23154 ...:5, c(NA, 5:8), c("A","NA"), c("a", NA_ character_)) ! Missing $ inserted. $ l.23158 Underfull \hbox (badness 10000) in paragraph at lines 23153--23158 []\OT1/cmr/m/n/10 anyNA() can work re-cur-sively with list()s: LL <- Underfull \hbox (badness 10000) in paragraph at lines 23153--23158 \OT1/cmr/m/n/10 list(1:5, c(NA, 5:8), c("A","NA"), c("a", NA$[]\OML/cmm/m/it/10 haracter[]\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 L\OT1/cmr/m/n/10 2 \OML/cmm/m/it/1 0 < Overfull \hbox (208.74068pt too wide) in paragraph at lines 23153--23158 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 LL\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 c\OT1/ cmr/m/n/10 (1\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3)]\OML/cmm/m/it/10 sapply\OT1/ cmr/m/n/10 (\OML/cmm/m/it/10 LL; anyNA\OT1/cmr/m/n/10 ); \OML/cmm/m/it/10 c\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 anyNA\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 LL\OT1/cmr /m/n/10 )\OML/cmm/m/it/10 ; anyNA\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 LL; TRUE\OT1 /cmr/m/n/10 ))\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 L\OT1/cm r/m/n/10 2\OML/cmm/m/it/10 ; anyNA\OT1/cmr/m/n/10 ); \OML/cmm/m/it/10 c\OT1/cmr /m/n/10 (\OML/cmm/m/it/10 anyNA\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 L\OT1/cmr/m/n/ 10 2)\OML/cmm/m/it/10 ; anyNA\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 L\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; TRUE\OT1/cmr/m/n/10 ))$ ! You can't use `macro parameter character #' in vertical mode. l.23159 # # ... lists, and hence data frames, too: ! You can't use `macro parameter character #' in vertical mode. l.23159 ## ... lists, and hence data frames, too: ! You can't use `macro parameter character #' in horizontal mode. l.23161 anyNA(dd) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.23162 anyNA(dN) # TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23163 \end{ExampleCode} ! Missing } inserted. } l.23163 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23164 \end{Examples} ! Undefined control sequence. l.23165 \HeaderA {name}{Names and Symbols}{name} ! Undefined control sequence. l.23166 \aliasA {as.name}{name}{as.name} ! Undefined control sequence. l.23167 \aliasA {as.symbol}{name}{as.symbol} ! Undefined control sequence. l.23168 \aliasA {is.name}{name}{is.name} ! Undefined control sequence. l.23169 \aliasA {is.symbol}{name}{is.symbol} ! Undefined control sequence. l.23170 \keyword {programming}{name} ! Undefined control sequence. l.23171 \keyword {attribute}{name} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23173 \begin{Description} \relax ! Undefined control sequence. l.23175 \R {} objects by name (rather than the value of the object, if any, b... Underfull \hbox (badness 2165) in paragraph at lines 23159--23177 \OT1/cmr/m/n/10 is.symbolnameis.symbol pro-gram-ming-name at-tribute-name A `na me' (also ! Undefined control sequence. l.23178 \code {as.name} and \code{as.symbol} are identical: they attempt to ! Undefined control sequence. l.23178 \code{as.name} and \code {as.symbol} are identical: they attempt to ! Undefined control sequence. l.23181 \code {is.symbol} and the identical \code{is.name} return \code{TRUE} ! Undefined control sequence. l.23181 \code{is.symbol} and the identical \code {is.name} return \code{TRUE} ! Undefined control sequence. l.23181 ...e identical \code{is.name} return \code {TRUE} ! Undefined control sequence. l.23182 or \code {FALSE} depending on whether the argument is a name or not. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23183 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23185 \begin{Usage} [225] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23193 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23195 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23196 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23197 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23198 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23199 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23201 \begin{Details} \relax ! Undefined control sequence. l.23203 of \R {} before 2.13.0). ! Undefined control sequence. l.23205 \code {as.name} first coerces its argument internally to a character ! Undefined control sequence. l.23206 vector (so methods for \code {as.character} are not used). It then ! Undefined control sequence. l.23207 ...st element and provided it is not \code {""}, returns a ! Undefined control sequence. l.23208 ... that name (and if the element is \code {NA\_character\_}, the ! Undefined control sequence. l.23209 name is \code {`NA`}). ! Undefined control sequence. l.23211 \code {as.name} is implemented as \code{\LinkA{as.vector}{as.vector}(... ! Undefined control sequence. l.23211 \code{as.name} is implemented as \code {\LinkA{as.vector}{as.vector}(... ! Undefined control sequence. l.23211 ...as.name} is implemented as \code{\LinkA {as.vector}{as.vector}(x, ... ! Undefined control sequence. l.23212 ... methods for the generic function \code {as.vector}. ! Undefined control sequence. l.23214 \code {is.name} and \code{is.symbol} are \LinkA{primitive}{primitive}... ! Undefined control sequence. l.23214 \code{is.name} and \code {is.symbol} are \LinkA{primitive}{primitive}... ! Undefined control sequence. l.23214 ...s.name} and \code{is.symbol} are \LinkA {primitive}{primitive} fun... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23215 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23217 \begin{Value} ! Undefined control sequence. l.23218 For \code {as.name} and \code{as.symbol}, an \R{} object of type ! Undefined control sequence. l.23218 For \code{as.name} and \code {as.symbol}, an \R{} object of type ! Undefined control sequence. l.23218 ...de{as.name} and \code{as.symbol}, an \R {} object of type ! Undefined control sequence. l.23219 \code {"symbol"} (see \code{\LinkA{typeof}{typeof}}). ! Undefined control sequence. l.23219 \code{"symbol"} (see \code {\LinkA{typeof}{typeof}}). ! Undefined control sequence. l.23219 \code{"symbol"} (see \code{\LinkA {typeof}{typeof}}). ! Undefined control sequence. l.23221 For \code {is.name} and \code{is.symbol}, a length-one logical vector ! Undefined control sequence. l.23221 For \code{is.name} and \code {is.symbol}, a length-one logical vector ! Undefined control sequence. l.23222 with value \code {TRUE} or \code{FALSE}. ! Undefined control sequence. l.23222 with value \code{TRUE} or \code {FALSE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23223 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23225 \begin{Note} \relax ! Undefined control sequence. l.23226 ...mbol' is from the LISP background of \R {}, whereas ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23228 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23230 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23234 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23236 \begin{SeeAlso} \relax ! Undefined control sequence. l.23237 \code {\LinkA{call}{call}}, \code{\LinkA{is.language}{is.language}}. ! Undefined control sequence. l.23237 \code{\LinkA {call}{call}}, \code{\LinkA{is.language}{is.language}}. ! Undefined control sequence. l.23237 \code{\LinkA{call}{call}}, \code {\LinkA{is.language}{is.language}}. ! Undefined control sequence. l.23237 \code{\LinkA{call}{call}}, \code{\LinkA [22 {is.language}{is.language}}. ! Undefined control sequence. l.23238 For the internal object mode, \code {\LinkA{typeof}{typeof}}. ! Undefined control sequence. l.23238 For the internal object mode, \code{\LinkA {typeof}{typeof}}. ! Undefined control sequence. l.23240 \code {\LinkA{plotmath}{plotmath}} for another use of `symbol'. ! Undefined control sequence. l.23240 \code{\LinkA {plotmath}{plotmath}} for another use of `symbol'. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23241 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23243 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23244 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23246 is.name(an) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.23247 mode(an) # name ! You can't use `macro parameter character #' in horizontal mode. l.23248 typeof(an) # symbol ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23249 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23250 \end{Examples} ! Undefined control sequence. l.23251 \HeaderA {names}{The Names of an Object}{names} ! Undefined control sequence. l.23252 \methaliasA {names.default}{names}{names.default} ! Undefined control sequence. l.23253 \aliasA {names<\Rdash{}}{names}{names<.Rdash.} ! Undefined control sequence. l.23253 \aliasA{names<\Rdash {}}{names}{names<.Rdash.} ! Undefined control sequence. l.23254 \methaliasA {names<\Rdash{}.default}{names}{names<.Rdash..default} ! Undefined control sequence. l.23254 \methaliasA{names<\Rdash {}.default}{names}{names<.Rdash..default} ! Undefined control sequence. l.23255 \keyword {attribute}{names} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23257 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23259 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23261 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23266 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23268 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23269 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23270 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.23270 \item[\code{x}] an \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23271 \item[\code{value}] a character vector of up to the same length as \... ! Undefined control sequence. l.23271 ...ector of up to the same length as \code {x}, or ! Undefined control sequence. l.23272 \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23273 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23274 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23276 \begin{Details} \relax ! Undefined control sequence. l.23277 \code {names} is a generic accessor function, and \code{names<-} is a ! Undefined control sequence. l.23277 ... a generic accessor function, and \code {names<-} is a ! Undefined control sequence. l.23279 the \code {"names"} attribute of a vector (including a list) or ! Undefined control sequence. l.23282 For an \code {\LinkA{environment}{environment}} \code{env}, \code{nam... ! Undefined control sequence. l.23282 For an \code{\LinkA {environment}{environment}} \code{env}, \code{nam... ! Undefined control sequence. l.23282 ...\LinkA{environment}{environment}} \code {env}, \code{names(env)} g... ! Undefined control sequence. l.23282 ...onment}{environment}} \code{env}, \code {names(env)} gives ! Undefined control sequence. l.23284 \code {names(as.list(env, all.names = TRUE))} which are also given by ! Undefined control sequence. l.23285 \code {\LinkA{ls}{ls}(env, all.names = TRUE, sorted = FALSE)}. If the ! Undefined control sequence. l.23285 \code{\LinkA ] {ls}{ls}(env, all.names = TRUE, sorted = FALSE)}. If the ! Undefined control sequence. l.23286 environment is used as a hash table, \code {names(env)} are its ! Undefined control sequence. l.23289 If \code {value} is shorter than \code{x}, it is extended by character ! Undefined control sequence. l.23289 If \code{value} is shorter than \code {x}, it is extended by character ! Undefined control sequence. l.23290 \code {NA}s to the length of \code{x}. ! Undefined control sequence. l.23290 \code{NA}s to the length of \code {x}. ! Undefined control sequence. l.23294 there is evaluated as \code {z <- "names<-"(z, "[<-"(names(z), 3, "c2... ! Undefined control sequence. l.23296 The name \code {""} is special: it is used to indicate that there is no ! Undefined control sequence. l.23298 Subscripting by \code {""} will match nothing (not even elements which ! Undefined control sequence. l.23301 A name can be character \code {NA}, but such a name will never be ! Undefined control sequence. l.23304 Both are \LinkA {primitive}{primitive} functions. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23305 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23307 \begin{Value} ! Undefined control sequence. l.23308 For \code {names}, \code{NULL} or a character vector of the same length ! Undefined control sequence. l.23308 For \code{names}, \code {NULL} or a character vector of the same length ! Undefined control sequence. l.23309 as \code {x}. (\code{NULL} is given if the object has no names, ! Undefined control sequence. l.23309 as \code{x}. (\code {NULL} is given if the object has no names, [226] ! Undefined control sequence. l.23314 For \code {names<-}, the updated object. (Note that the value of ! Undefined control sequence. l.23315 \code {names(x) <- value} is that of the assignment, \code{value}, not ! Undefined control sequence. l.23315 ...value} is that of the assignment, \code {value}, not ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23317 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23319 \begin{Note} \relax ! Undefined control sequence. l.23320 ...ectors, the names are one of the \LinkA {attributes}{attributes} with ! Undefined control sequence. l.23324 For a one-dimensional array the \code {names} attribute really is ! Undefined control sequence. l.23325 \code {\LinkA{dimnames}{dimnames}[[1]]}. ! Undefined control sequence. l.23325 \code{\LinkA {dimnames}{dimnames}[[1]]}. ! Undefined control sequence. l.23328 \code {\LinkA{slotNames}{slotNames}()} (and no \code{names()}). ! Undefined control sequence. l.23328 \code{\LinkA {slotNames}{slotNames}()} (and no \code{names()}). ! Undefined control sequence. l.23328 ...{slotNames}{slotNames}()} (and no \code {names()}). ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23329 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23331 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23335 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23337 \begin{SeeAlso} \relax ! Undefined control sequence. l.23338 \code {\LinkA{slotNames}{slotNames}}, \code{\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.23338 \code{\LinkA {slotNames}{slotNames}}, \code{\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.23338 \code{\LinkA{slotNames}{slotNames}}, \code {\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.23338 ...kA{slotNames}{slotNames}}, \code{\LinkA {dimnames}{dimnames}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23339 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23341 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23342 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23343 # print the names attribute of the islands data set ! You can't use `macro parameter character #' in vertical mode. l.23346 # remove the names attribute ! You can't use `macro parameter character #' in horizontal mode. l.23349 rm(islands) # remove the copy made ! You can't use `macro parameter character #' in horizontal mode. l.23353 # change just the name of the third element. ! You can't use `macro parameter character #' in horizontal mode. l.23359 # # assign just one name ! You can't use `macro parameter character #' in horizontal mode. l.23359 ## assign just one name ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23364 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23365 \end{Examples} ! Undefined control sequence. l.23366 \HeaderA {nargs}{The Number of Arguments to a Function}{nargs} ! Undefined control sequence. l.23367 \keyword {programming}{nargs} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23369 \begin{Description} \relax ! Undefined control sequence. l.23370 When used inside a function body, \code {nargs} returns the number of ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23373 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23375 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23379 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23381 \begin{Details} \relax ! Undefined control sequence. l.23382 ...mpty (missing) arguments, so that \code {foo(x,{},z)} ! Undefined control sequence. l.23384 ...her indirect ways, so for example \code {x[]} ! Undefined control sequence. l.23385 might dispatch a call to \code {`[.some\_method`(x, )} which is ! Undefined control sequence. l.23388 This is [23 a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23389 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23391 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23395 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23397 \begin{SeeAlso} \relax ! Undefined control sequence. l.23398 \code {\LinkA{args}{args}}, \code{\LinkA{formals}{formals}} and \code... ! Undefined control sequence. l.23398 \code{\LinkA {args}{args}}, \code{\LinkA{formals}{formals}} and \code... ! Undefined control sequence. l.23398 \code{\LinkA{args}{args}}, \code {\LinkA{formals}{formals}} and \code... ! Undefined control sequence. l.23398 \code{\LinkA{args}{args}}, \code{\LinkA {formals}{formals}} and \code... ! Undefined control sequence. l.23398 ...ode{\LinkA{formals}{formals}} and \code {\LinkA{sys.call}{sys.call}}. ! Undefined control sequence. l.23398 ...nkA{formals}{formals}} and \code{\LinkA {sys.call}{sys.call}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23399 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23401 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23402 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23404 tst() # 0 ! You can't use `macro parameter character #' in horizontal mode. l.23405 tst(clicketyclack) # 1 (even non-existing) ! You can't use `macro parameter character #' in horizontal mode. l.23406 tst(c1, a2, rr3) # 3 ! Undefined control sequence. l.23409 ..."call was ", deparse(match.call()), "\n ", sep = "") ! You can't use `macro parameter character #' in horizontal mode. l.23412 foo() # 0 ! You can't use `macro parameter character #' in horizontal mode. l.23413 foo(, , 3) # 3 ! You can't use `macro parameter character #' in horizontal mode. l.23414 foo(z = 3) # 1, even though this is the same call ! You can't use `macro parameter character #' in horizontal mode. l.23416 nargs() # not really meaningful ! LaTeX Error: \begin{docum]ent} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23417 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23418 \end{Examples} ! Undefined control sequence. l.23419 \HeaderA {nchar}{Count the Number of Characters (or Bytes or Width)}{... ! Undefined control sequence. l.23420 \aliasA {nzchar}{nchar}{nzchar} ! Undefined control sequence. l.23421 \keyword {character}{nchar} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23423 \begin{Description} \relax ! Undefined control sequence. l.23424 \code {nchar} takes a character vector as an argument and ! Undefined control sequence. l.23426 the corresponding elements of \code {x}. ! Undefined control sequence. l.23428 \code {nzchar} is a fast way to find out if elements of a character ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23430 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23432 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23438 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23440 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23441 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23442 \item[\code{x}] character vector, or a vector to be coerced to a cha... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23444 \item[\code{type}] character string: partial matching to one of ! Undefined control sequence. l.23445 \code {c("bytes", "chars", "width")}. See `Details'. [227] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23446 \item[\code{allowNA}] logical: should \code{NA} be returned for invalid ! Undefined control sequence. l.23446 ...m[\code{allowNA}] logical: should \code {NA} be returned for invalid ! Undefined control sequence. l.23447 multibyte strings or \code {"bytes"}-encoded strings (rather than ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23449 \item[\code{keepNA}] logical: should \code{NA} be returned where ever ! Undefined control sequence. l.23449 \item[\code{keepNA}] logical: should \code {NA} be returned where ever ! Undefined control sequence. l.23450 \code {x} is \code{\LinkA{NA}{NA}}? If false, \code{nchar()} returns ! Undefined control sequence. l.23450 \code{x} is \code {\LinkA{NA}{NA}}? If false, \code{nchar()} returns ! Undefined control sequence. l.23450 \code{x} is \code{\LinkA {NA}{NA}}? If false, \code{nchar()} returns ! Undefined control sequence. l.23450 ...\code{\LinkA{NA}{NA}}? If false, \code {nchar()} returns ! Undefined control sequence. l.23451 \code {2}, as that is the number of printing characters used when ! Undefined control sequence. l.23452 strings are written to output, and \code {nzchar()} is \code{TRUE}. The ! Undefined control sequence. l.23452 ...to output, and \code{nzchar()} is \code {TRUE}. The ! Undefined control sequence. l.23453 default for \code {nchar()}, \code{NA}, means to use \code{keepNA = T... ! Undefined control sequence. l.23453 default for \code{nchar()}, \code {NA}, means to use \code{keepNA = T... ! Undefined control sequence. l.23453 ...nchar()}, \code{NA}, means to use \code {keepNA = TRUE} ! Undefined control sequence. l.23454 unless \code {type} is \code{"width"}. Used to be (implicitly) hard ! Undefined control sequence. l.23454 unless \code{type} is \code {"width"}. Used to be (implicitly) hard ! Undefined control sequence. l.23455 coded to \code {FALSE} in \R{} versions \eqn{\le}{} 3.2.0. ! Undefined control sequence. l.23455 coded to \code{FALSE} in \R {} versions \eqn{\le}{} 3.2.0. ! Undefined control sequence. l.23455 ...d to \code{FALSE} in \R{} versions \eqn {\le}{} 3.2.0. ! Missing $ inserted. $ l.23455 ... \code{FALSE} in \R{} versions \eqn{\le }{} 3.2.0. ! Extra }, or forgotten $. l.23455 ...\code{FALSE} in \R{} versions \eqn{\le} {} 3.2.0. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23456 \end{ldescription} ! Missing $ inserted. $ l.23456 \end{ldescription} ! Missing } inserted. } l.23456 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23457 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23459 \begin{Details} \relax ! Undefined control sequence. l.23461 three ways (corresponding to the \code {type} argument): ! Undefined control sequence. \code {bytes} l.23464 \item[\code{bytes}] The number of bytes needed to store the string ! Undefined control sequence. \code {chars} l.23466 \item[\code{chars}] The number of human-readable characters. ! Undefined control sequence. \code {width} l.23467 \item[\code{width}] The number of columns \code{\LinkA{cat}{cat}} wi... ! Undefined control sequence. l.23467 ...ode{width}] The number of columns \code {\LinkA{cat}{cat}} will us... ! Undefined control sequence. l.23467 ...th}] The number of columns \code{\LinkA {cat}{cat}} will use to ! Undefined control sequence. l.23468 ...n a monospaced font. The same as \code {chars} ! Undefined control sequence. l.23474 locales (but note how \code {type} determines the default for ! Undefined control sequence. l.23475 \code {keepNA}). There will be differences between the first two with ! Undefined control sequence. l.23479 \code {\LinkA{as.character}{as.character}} is performed on \code{x} (... ! Undefined control sequence. l.23479 \code{\LinkA {as.character}{as.character}} is performed on \code{x} (... ! Undefined control sequence. l.23479 ...r}{as.character}} is performed on \code {x} (so there is no ! Undefined control sequence. l.23481 passing them through \code {\LinkA{deparse}{deparse}} first will be r... ! Undefined control sequence. l.23481 passing them through \code{\LinkA {deparse}{deparse}} first will be r... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23482 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23484 \begin{Value} ! Undefined control sequence. l.23485 For \code {nchar}, an integer vector giving the sizes of each element. ! Undefined control sequence. l.23486 For missing values (i.e., \code {NA}, i.e., \code{\LinkA{NA\_characte... ! Undefined control sequence. l.23486 ...ng values (i.e., \code{NA}, i.e., \code {\LinkA{NA\_character\_}{N... ! Undefined control sequence. l.23486 ...es (i.e., \code{NA}, i.e., \code{\LinkA {NA\_character\_}{NA.Rul.c... ! Undefined control sequence. l.23487 \code {nchar()} returns \code{\LinkA{NA\_integer\_}{NA.Rul.integer.Ru... ! Undefined control sequence. l.23487 \code{nchar()} returns \code [24 {\LinkA{NA\_integer\_}{NA.Rul.integer.Ru... ! Undefined control sequence. l.23487 \code{nchar()} returns \code{\LinkA {NA\_integer\_}{NA.Rul.integer.Ru... ! Undefined control sequence. l.23487 ...teger\_}{NA.Rul.integer.Rul.}} if \code {keepNA} is ! Undefined control sequence. l.23488 true, and \code {2}, the number of printing characters, if false. ! Undefined control sequence. l.23490 \code {type = "width"} gives (an approximation to) the number of ! Undefined control sequence. l.23494 If \code {allowNA = TRUE} and an element is detected as invalid in a ! Undefined control sequence. l.23496 the width will be \code {NA}. Otherwise the number of characters will ! Undefined control sequence. l.23497 be non-negative, so \code {!is.na(nchar(x, "chars", TRUE))} is a test ! Undefined control sequence. l.23500 A character string marked with \code {"bytes"} encoding (see ! Undefined control sequence. l.23501 \code {\LinkA{Encoding}{Encoding}}) has a number of bytes, but neithe... ! Undefined control sequence. l.23501 \code{\LinkA {Encoding}{Encoding}}) has a number of bytes, but neithe... ! Undefined control sequence. l.23503 \code {NA} if \code{allowNA = TRUE}, otherwise an error. ! Undefined control sequence. l.23503 \code{NA} if \code {allowNA = TRUE}, otherwise an error. ! Undefined control sequence. l.23507 For \code {nzchar}, a logical vector of the same length as \code{x}, ! Undefined control sequence. l.23507 ...ical vector of the same length as \code {x}, ! Undefined control sequence. l.23509 \code {NA}, \code{nzchar()} is true when \code{keepNA} is false, as by ! Undefined control sequence. l.23509 \code{NA}, \code {nzchar()} is true when \code{keepNA} is false, as by ! Undefined control sequence. l.23509 ...NA}, \code{nzchar()} is true when \code {keepNA} is false, as by ! Undefined control sequence. l.23510 default, and \code {NA} otherwise. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23511 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23513 \begin{Note} \relax ! Undefined control sequence. l.23514 This does \strong {not} by default give the number of characters that ! Undefined control sequence. l.23515 will be used to \code {print()} the string. Use ! Undefined control sequence. l.23516 \code {\LinkA{encodeString}{encodeString}} to find that. ! Undefined control sequence. l.23516 \code{\LinkA {encodeString}{encodeString}} to find that. ! Undefined control sequence. l.23519 may use escapes such as \samp {} in a non-UTF-8 locale. ! Undefined control sequence. l.23524 example would be \code {"y\bsl{}u306"}, which is two characters of width ! Undefined control sequence. l.23524 example would be \code{"y\bsl {}u306"}, which is two characters of width ! Undefined control sequence. l.23526 ...ters such as the zero-width space \code {"\bsl{}u200b"}. ! Undefined control sequence. l.23526 ...uch as the zero-width space \code{"\bsl {}u200b"}. [228]] Chapter 6 [25 ! Undefined control sequence. l.23540 \code {nchar} for characters in that class (and some others) depends on ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23545 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23547 \begin{References} \relax ! Undefined control sequence. l.23553 \url {http://www.unicode.org/reports/tr11/} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23554 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23556 \begin{SeeAlso} \relax ! Undefined control sequence. l.23557 \code {\LinkA{strwidth}{strwidth}} giving width of strings for plotting; ! Undefined control sequence. l.23557 \code{\LinkA {strwidth}{strwidth}} giving width of strings for plotting; ! Undefined control sequence. l.23558 \code {\LinkA{paste}{paste}}, \code{\LinkA{substr}{substr}}, \code{\L... ! Undefined control sequence. l.23558 \code{\LinkA {paste}{paste}}, \code{\LinkA{substr}{substr}}, \code{\L... ! Undefined control sequence. l.23558 \code{\LinkA{paste}{paste}}, \code {\LinkA{substr}{substr}}, \code{\L... ! Undefined control sequence. l.23558 \code{\LinkA{paste}{paste}}, \code{\LinkA {substr}{substr}}, \code{\L... ! Undefined control sequence. l.23558 ...}, \code{\LinkA{substr}{substr}}, \code {\LinkA{strsplit}{strsplit}} ! Undefined control sequence. l.23558 ...e{\LinkA{substr}{substr}}, \code{\LinkA {strsplit}{strsplit}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23559 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23561 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23562 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23565 # 5 6 6 1 15 Underfull \hbox (badness 10000) in paragraph at lines 23552--23566 []\OT1/cmr/m/n/10 Unicode Stan-dard An-nex #11: \OT1/cmr/m/it/10 East Asian Wid th. Underfull \hbox (badness 2856) in paragraph at lines 23552--23566 \OT1/cmr/m/n/10 http://www.unicode.org/reports/tr11/ str-width-str-width giv-i ng width of ! You can't use `macro parameter character #' in horizontal mode. l.23568 # 18 17 <-- unless mean differs from base::mean ! You can't use `macro parameter character #' in horizontal mode. l.23571 nchar(x, keep]NA= TRUE) # 5 6 NA 1 15 ! You can't use `macro parameter character #' in horizontal mode. l.23572 nchar(x, keepNA=FALSE) # 5 6 2 1 15 Underfull \hbox (badness 1515) in paragraph at lines 23570--23576 []\OT1/cmr/m/n/10 x[3] <- NA; x nchar(x, keepNA= TRUE) 5 6 NA 1 15 nchar(x, Underfull \hbox (badness 2980) in paragraph at lines 23570--23576 \OT1/cmr/m/n/10 keepNA=FALSE) 5 6 2 1 15 stopifnot(identical(nchar(x ), nchar( x, ! You can't use `macro parameter character #' in vertical mode. l.23577 # #' nchar() for all three types : ! You can't use `macro parameter character #' in vertical mode. l.23577 ## ' nchar() for all three types : ! You can't use `macro parameter character #' in horizontal mode. l.23582 nchars("\u200b") # in R versions (>= 2015-09-xx): ! You can't use `macro parameter character #' in horizontal mode. l.23583 # # chars bytes width ! You can't use `macro parameter character #' in horizontal mode. l.23583 ## chars bytes width ! You can't use `macro parameter character #' in horizontal mode. l.23584 # # 1 3 0 ! You can't use `macro parameter character #' in horizontal mode. l.23584 ## 1 3 0 ! You can't use `macro parameter character #' in horizontal mode. l.23586 data.frame(x, nchars(x)) # # all three types : same unless for NA ! You can't use `macro parameter character #' in horizontal mode. l.23586 data.frame(x, nchars(x)) ## all three types : same unless for NA ! You can't use `macro parameter character #' in horizontal mode. l.23587 # # force the same by forcing 'keepNA': ! You can't use `macro parameter character #' in horizontal mode. l.23587 ## force the same by forcing 'keepNA': ! You can't use `macro parameter character #' in horizontal mode. l.23588 (ncT <- nchars(x, keepNA = TRUE)) # # .... NA NA NA .... ! You can't use `macro parameter character #' in horizontal mode. l.23588 (ncT <- nchars(x, keepNA = TRUE)) ## .... NA NA NA .... ! You can't use `macro parameter character #' in horizontal mode. l.23589 (ncF <- nchars(x, keepNA = FALSE))# # .... 2 2 2 .... ! You can't use `macro parameter character #' in horizontal mode. l.23589 (ncF <- nchars(x, keepNA = FALSE))## .... 2 2 2 .... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23592 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23593 \end{Examples} ! Undefined control sequence. l.23594 \HeaderA {nlevels}{The Number of Levels of a Factor}{nlevels} ! Undefined control sequence. l.23595 \keyword {category}{nlevels} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23597 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23599 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23601 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23605 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23607 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23608 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23609 \item[\code{x}] an object, usually a factor. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23610 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23611 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23613 \begin{Details} \relax ! Undefined control sequence. l.23617 with the \code {\LinkA{levels}{levels}} function. ! Undefined control sequence. l.23617 with the \code{\LinkA {levels}{levels}} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23618 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23620 \begin{Value} ! Undefined control sequence. l.23621 The length of \code {\LinkA{levels}{levels}(x)}, which is zero if ! Undefined control sequence. l.23621 The length of \code{\LinkA {levels}{levels}(x)}, which is zero if ! Undefined control sequence. l.23622 \code {x} has no levels. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23623 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23625 \begin{SeeAlso} \relax ! Undefined control sequence. l.23626 \code {\LinkA{levels}{levels}}, \code{\LinkA{factor}{factor}}. ! Undefined control sequence. l.23626 \code{\LinkA {levels}{levels}}, \code{\LinkA{factor}{factor}}. ! Undefined control sequence. l.23626 \code{\LinkA{levels}{levels}}, \code {\LinkA{factor}{factor}}. ! Undefined control sequence. l.23626 ...e{\LinkA{levels}{levels}}, \code{\LinkA {factor}{factor}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23627 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23629 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23630 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23631 nlevels(gl(3, 7)) # = 3 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23632 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23633 \end{Examples} ! Undefined control sequence. l.23634 \HeaderA {noquote}{Class for `no quote' Printing of Character Strings... ! Undefined control sequence. l.23635 \aliasA {as.matrix.noquote}{noquote}{as.matrix.noquote} ! Undefined control sequence. l.23636 \aliasA {c.noquote}{noquote}{c.noquote} ! Undefined control sequence. l.23637 \aliasA {print.noquote}{noquote}{print.noquote} ! Undefined control sequence. l.23638 \aliasA {[.noquote}{noquote}{[.noquote} ! Undefined control sequence. l.23639 \keyword {print}{noquote} ! Undefined control sequence. l.23640 \keyword {methods}{noquote} ! Undefined control sequence. l.23641 \keyword {utilities}{noquote} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23643 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23645 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23647 \begin{Usage} Underfull \hbox (badness 3635) in paragraph at lines 23616--23648 \OT1/cmr/m/n/10 c.noquotenoquotec.noquote print.noquotenoquoteprint.noquote [.n o-quoteno- [229 [26]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23657 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23659 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23660 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23661 \item[\code{obj}] any \R{} object, typically a vector of ! Undefined control sequence. l.23661 \item[\code{obj}] any \R {} object, typically a vector of ! Undefined control sequence. l.23662 \code {\LinkA{character}{character}} strings. ! Undefined control sequence. l.23662 \code{\LinkA {character}{character}} strings. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23663 \item[\code{x}] an object of class \code{"noquote"}. ! Undefined control sequence. l.23663 \item[\code{x}] an object of class \code {"noquote"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23664 \item[\code{...}] further options passed to next methods, such as \c... ! Undefined control sequence. l.23664 ...s passed to next methods, such as \code {\LinkA{print}{print}}. ! Undefined control sequence. l.23664 ...d to next methods, such as \code{\LinkA {print}{print}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23665 \item[\code{recursive}] for compatibility with the generic \code{\Li... ! Undefined control sequence. l.23665 ...or compatibility with the generic \code {\LinkA{c}{c}} function. ! Undefined control sequence. l.23665 ...atibility with the generic \code{\LinkA {c}{c}} function. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23666 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23667 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23669 \begin{Details} \relax ! Undefined control sequence. l.23670 \code {noquote} returns its argument as an object of class ! Undefined control sequence. l.23671 \code {"noquote"}. There is a method for \code{c()} and subscript ! Undefined control sequence. l.23671 ...noquote"}. There is a method for \code {c()} and subscript ! Undefined control sequence. l.23672 method (\code {"[.noquote"}) which ensures that the class is not lost ! Undefined control sequence. l.23673 by subsetting. The print method (\code {print.noquote}) prints ! Undefined control sequence. l.23674 ...er strings \emph{without} quotes (\code {"..."}). ! Undefined control sequence. l.23677 \code {\LinkA{class}{class}} and object orientation. ! Undefined control sequence. l.23677 \code{\LinkA {class}{class}} and object orientation. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23678 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23680 \begin{Author} \relax ! Undefined control sequence. l.23681 Martin Maechler \email {maechler@stat.math.ethz.ch} ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23682 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23684 \begin{SeeAlso} \relax ! Undefined control sequence. l.23685 \code {\LinkA{methods}{methods}}, \code{\LinkA{class}{class}}, \code{... ! Undefined control sequence. l.23685 \code{\LinkA {methods}{methods}}, \code{\LinkA{class}{class}}, \code{... ! Undefined control sequence. l.23685 \code{\LinkA{methods}{methods}}, \code {\LinkA{class}{class}}, \code{... ! Undefined control sequence. l.23685 ...\LinkA{methods}{methods}}, \code{\LinkA {class}{class}}, \code{\Li... ! Undefined control sequence. l.23685 ...s}}, \code{\LinkA{class}{class}}, \code {\LinkA{print}{print}}. ! Undefined control sequence. l.23685 ...ode{\LinkA{class}{class}}, \code{\LinkA {print}{print}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23686 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23688 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23689 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23698 # # Purpose: compact printing of logicals ! You can't use `macro parameter character #' in horizontal mode. l.23698 ## Purpose: compact printing of logicals ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23703 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23704 \end{Examples} ! Undefined control sequence. l.23705 \HeaderA {norm}{Compute the Norm of a Matrix}{norm} ! Undefined control sequence. l.23706 \keyword {math}{norm} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23708 \begin{Description} \relax ! Undefined control sequence. l.23709 Computes a matrix norm of \code {x} using LAPACK. The norm can be ! Undefined control sequence. l.23710 the one (\code {"O"}) norm, the infinity (\code{"I"}) norm, the ! Undefined control sequence. l.23710 ... (\code{"O"}) norm, the infinity (\code {"I"}) norm, the ! Undefined control sequence. l.23711 Frobenius (\code {"F"}) norm, the maximum modulus (\code{"M"}) among ! Undefined control sequence. l.23711 ...{"F"}) norm, the maximum modulus (\code {"M"}) among ! Undefined control sequence. l.23712 ... a matrix, or the ``spectral'' or \code {"2"}-norm, as ! Undefined control sequence. l.23713 determined by the value of \code {type}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23714 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23716 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23720 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23722 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23723 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23724 \item[\code{x}] numeric matrix; note that packages such as \Rhref{ht... ! Undefined control sequence. l.23724 ...trix; note that packages such as \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.23724 ...CRAN.R-project.org/package=Matrix}{\pkg {Matrix}} ! Undefined control sequence. l.23725 define more \code {norm()} methods. Underfull \hbox (badness 10000) in paragraph at lines 23724--23726 []\OT1/cmr/m/n/10 numeric ma-trix; note that pack-ages such as https://CRAN.R- ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23726 \item[\code{type}] character string, specifying the \emph{type} of m... ! Undefined control sequence. \code {"O"}, \code {"o"} or \code {"1"} l.23731 ...m[\code{"O"}, \code{"o"} or \code{"1"}] specifies the \bold{o}ne ... ! Undefined control sequence. \code {"O"}, \code {"o"} or \code {"1"} l.23731 ...m[\code{"O"}, \code{"o"} or \code{"1"}] specifies the \bold{o}ne ... ! Undefined control sequence. \code {"O"}, \code {"o"} or \code {"1"} l.23731 ...m[\code{"O"}, \code{"o"} or \code{"1"}] specifies the \bold{o}ne ... ! Undefined control sequence. l.23731 ..."o"} or \code{"1"}] specifies the \bold {o}ne norm, ! Undefined control sequence. \code {"I"} or \code {"i"} l.23733 \item[\code{"I"} or \code{"i"}] specifies the \bold{i}nfinity norm (... ! Undefined control sequence. \code {"I"} or \code {"i"} l.23733 \item[\code{"I"} or \code{"i"}] specifies the \bold{i}nfinity norm (... ! Undefined control sequence. l.23733 ..."I"} or \code{"i"}] specifies the \bold {i}nfinity norm (maximum ! Undefined control sequence. \code {"F"} or \code {"f"} l.23735 \item[\code{"F"} or \code{"f"}] specifies the \bold{F}robenius norm ... ! Undefined control sequence. \code {"F"} or \code {"f"} l.23735 \item[\code{"F"} or \code{"f"}] specifies the \bold{F}robenius norm ... ! Undefined control sequence. l.23735 ..."F"} or \code{"f"}] specifies the \bold {F}robenius norm (the ! Undefined control sequence. l.23736 Euclidean norm of \code {x} treated as if it were a vector); ! Undefined control sequence. \code {"M"} or \code {"m"} l.23737 \item[\code{"M"} or \code{"m"}] specifies the \bold{m}aximum modulus of ! Undefined control sequence. \code {"M"} or \code {"m"} l.23737 \item[\code{"M"} or \code{"m"}] specifies the \bold{m}aximum modulus of ! Undefined control sequence. l.23737 ..."M"} or \code{"m"}] specifies the \bold {m}aximum modulus of ! Undefined control sequence. l.23738 all the elements in \code {x}; and ! Undefined control sequence. \code {"2"} l.23739 \item[\code{"2"}] specifies the ``spectral'' or 2-norm, which ! Undefined control sequence. l.23740 is the largest singular value (\code {\LinkA{svd}{svd}}) of \code{x}. ! Undefined control sequence. l.23740 ...he largest singular value (\code{\LinkA {svd}{svd}}) of \code{x}. ! Undefined control sequence. l.23740 ...alue (\code{\LinkA{svd}{svd}}) of \code {x}. ! Undefined control sequence. l.23744 The default is \code {"O"}. Only the first character of ! Undefined control sequence. l.23745 \code {type[1]} is used. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23746 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23747 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23749 \begin{Details} \relax ! Undefined control sequence. l.23750 The \pkg {base} method of \code{norm()} calls the Lapack function ! Undefined control sequence. l.23750 The \pkg{base} method of \code {norm()} calls the Lapack function ! Undefined control sequence. l.23751 \code {dlange}. ! Undefined control sequence. l.23753 Note that the 1-, Inf- and \code {"M"} norm is faster to calculate than ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23759 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23761 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23763 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23765 \begin{Source} \relax ! Undefined control sequence. l.23766 Except for \code {norm = "2"}, the LAPACK routine \code{DLANGE}. ! Undefined control sequence. l.23766 ...e{norm = "2"}, the LAPACK routine \code {DLANGE}. ! Undefined control sequence. l.23768 LAPACK is from \url {http://www.netlib.org/lapack}. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23769 \end{Source} [27 ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23771 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23775 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23777 \begin{SeeAlso} \relax ! Undefined control sequence. l.23778 \code {\LinkA{rcond}{rcond}} for the (reciprocal) condition number. ! Undefined control sequence. l.23778 \code{\LinkA {rcond}{rcond}} for the (reciprocal) condition number. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23779 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23781 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23782 \begin{ExampleCode} ! Missing $ inserted. $ l.23788 sqrt(sum(x1^ 2)))) ! Missing $ inserted. $ l.23789 [230]] ! You can't use `macro parameter character #' in horizontal mode. l.23792 # # all 5 types of norm: ! You can't use `macro parameter character #' in horizontal mode. l.23792 ## all 5 types of norm: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23795 \end{ExampleCode} ! Missing $ inserted. $ l.23795 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23796 \end{Examples} ! Undefined control sequence. l.23797 \HeaderA {normalizePath}{Express File Paths in Canonical Form}{normal... ! Undefined control sequence. l.23798 \keyword {utilities}{normalizePath} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23800 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23804 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23806 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23810 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23812 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23813 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23814 \item[\code{path}] character vector of file paths. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23815 \item[\code{winslash}] the separator to be used on Windows -- ignored ! Undefined control sequence. l.23816 elsewhere. Must be one of \code {c("/", "\bsl{}\bsl{}")}. ! Undefined control sequence. l.23816 ...ere. Must be one of \code{c("/", "\bsl {}\bsl{}")}. ! Undefined control sequence. l.23816 ...Must be one of \code{c("/", "\bsl{}\bsl [28 {}")}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23817 \item[\code{mustWork}] logical: if \code{TRUE} then an error is give... ! Undefined control sequence. l.23817 \item[\code{mustWork}] logical: if \code {TRUE} then an error is give... ! Undefined control sequence. l.23818 cannot be determined; if \code {NA} then a warning. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23819 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23820 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23822 \begin{Details} \relax ! Undefined control sequence. l.23823 Tilde-expansion (see \code {\LinkA{path.expand}{path.expand}}) is fir... ! Undefined control sequence. l.23823 Tilde-expansion (see \code{\LinkA {path.expand}{path.expand}}) is fir... ! Undefined control sequence. l.23824 \code {paths}. ! Undefined control sequence. l.23827 ...paths in their canonical form (no \samp {./}, \samp{../} nor ! Undefined control sequence. l.23827 ...eir canonical form (no \samp{./}, \samp {../} nor ! Undefined control sequence. l.23829 \code {realpath}: if the platform does not have that (we know of no ! Undefined control sequence. l.23831 not be canonical. Even where \code {realpath} is used the canonical ! Undefined control sequence. l.23837 is that specified by \code {winslash}. It will match paths ! Undefined control sequence. l.23841 \code {mustWork = FALSE} is useful for expressing paths for use in ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23843 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23845 \begin{Value} ! Undefined control sequence. l.23849 \code {mustWork = TRUE}, when this should be an error). It will be ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23869 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23871 \begin{Note} \relax ! Undefined control sequence. l.2387]3 on macOS absolute paths such as \file {/tmp} and \file{/var} are ! Undefined control sequence. l.23873 ...ute paths such as \file{/tmp} and \file {/var} are ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23875 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23877 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23878 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23879 # random tempdir ! Undefined control sequence. l.23880 ...Path(c(R.home(), tempdir())), sep = "\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23881 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23882 \end{Examples} ! Undefined control sequence. l.23883 \HeaderA {NotYet}{Not Yet Implemented Functions and Unused Arguments}... ! Undefined control sequence. l.23884 \aliasA {.NotYetImplemented}{NotYet}{.NotYetImplemented} ! Undefined control sequence. l.23885 \aliasA {.NotYetUsed}{NotYet}{.NotYetUsed} ! Undefined control sequence. l.23886 \aliasA {NotYetImplemented}{NotYet}{NotYetImplemented} ! Undefined control sequence. l.23887 \aliasA {NotYetUsed}{NotYet}{NotYetUsed} ! Undefined control sequence. l.23888 \keyword {documentation}{NotYet} ! Undefined control sequence. l.23889 \keyword {utilities}{NotYet} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23891 \begin{Description} \relax ! Undefined control sequence. l.23892 ... pinpoint missing functionality, the \R {} core team uses ! Undefined control sequence. l.23893 these functions for missing \R {} functions and not yet used argument... ! Undefined control sequence. l.23894 existing \R {} functions (which are typically there for compatibility [231 Chapter 7] [29] ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23898 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23900 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23905 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23907 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23908 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23909 \item[\code{arg}] an argument of a function that is not yet used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23910 \item[\code{error}] a logical. If \code{TRUE}, an error is signalle... ! Undefined control sequence. l.23910 \item[\code{error}] a logical. If \code {TRUE}, an error is signalle... ! Undefined control sequence. l.23911 \code {FALSE}; only a warning is given. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23912 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23913 \end{Arguments} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23915 \begin{SeeAlso} \relax ! Undefined control sequence. l.23916 the contrary, \code {\LinkA{Deprecated}{Deprecated}} and ! Undefined control sequence. l.23916 the contrary, \code{\LinkA {Deprecated}{Deprecated}} and ! Undefined control sequence. l.23917 \code {\LinkA{Defunct}{Defunct}} for outdated code. ! Undefined control sequence. l.23917 \code{\LinkA {Defunct}{Defunct}} for outdated code. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23918 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23920 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23921 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23923 barplot(1:5, inside = TRUE) # 'inside' is not yet used ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23924 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23925 \end{Examples} ! Undefined control sequence. l.23926 \HeaderA {nrow}{The Number of Rows/Columns of an Array}{nrow} ! Undefined control sequence. l.23927 \aliasA {NCOL}{nrow}{NCOL} ! Undefined control sequence. l.23928 \aliasA {ncol}{nrow}{ncol} ! Undefined control sequence. l.23929 \aliasA {NROW}{nrow}{NROW} ! Undefined control sequence. l.23930 \keyword {array}{nrow} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23932 \begin{Description} \relax ! Undefined control sequence. l.23933 \code {nrow} and \code{ncol} return the number of rows or columns ! Undefined control sequence. l.23933 \code{nrow} and \code {ncol} return the number of rows or columns ! Undefined control sequence. l.23934 present in \code {x}. ! Undefined control sequence. l.23935 \code {NCOL} and \code{NROW} do the same treating a vector as ! Undefined control sequence. l.23935 \code{NCOL} and \code {NROW} do the same treating a vector as ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23937 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23939 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23946 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23948 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23949 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23950 \item[\code{x}] a vector, array or data frame ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23951 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23952 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23954 \begin{Value} ! Undefined control sequence. l.23955 an \code {\LinkA{integer}{integer}} of length 1 or \code{\LinkA{NULL}... ! Undefined control sequence. l.23955 an \code{\LinkA {integer}{integer}} of length 1 or \code{\LinkA{NULL}... ! Undefined control sequence. l.23955 ...integer}{integer}} of length 1 or \code {\LinkA{NULL}{NULL}}. ! Undefined control sequence. l.23955 ...}{integer}} of length 1 or \code{\LinkA {NULL}{NULL}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23956 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23958 \begin{References} \relax ! Undefined control sequence. l.23961 Wadsworth \& Brooks/Cole (\code {ncol} and \code{nrow}.) ! Undefined control sequence. l.23961 ...h \& Brooks/Cole (\code{ncol} and \code {nrow}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23962 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23964 \begin{SeeAlso} \relax ! Undefined control sequence. l.23965 \code {\LinkA{dim}{dim}} which returns \emph{all} dimensions; ! Undefined control sequence. l.23965 \code{\LinkA {dim}{dim}} which returns \emph{all} dimensions; ! Undefined control sequence. l.23966 \code {\LinkA{array}{array}}, \code{\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.23966 \code{\LinkA {array}{array}}, \code{\LinkA{matrix}{matrix}}. ! Undefined control sequence. l.23966 \code{\LinkA{array}{array}}, \code {\LinkA{matrix}{matrix}}. ! Undefined control sequ [30ence. l.23966 \code{\LinkA{array}{array}}, \code{\LinkA {matrix}{matrix}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23967 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23969 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23970 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.23972 nrow(ma) # 3 ! You can't use `macro parameter character #' in horizontal mode. l.23973 ncol(ma) # 4 ! You can't use `macro parameter character #' in horizontal mode. l.23975 ncol(array(1:24, dim = 2:4)) # 3, the second dimension ! You can't use `macro parameter character #' in horizontal mode. l.23976 NCOL(1:12) # 1 ! You can't use `macro parameter character #' in horizontal mode. l.23977 NROW(1:12) # 12 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23978 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23979 \end{Examples} ! Undefined control sequence. l.23980 \HeaderA {ns-dblcolon}{Double Colon and Triple Colon Operators}{ns.Rd... ! Undefined control sequence. l.23981 \aliasA {::}{ns-dblcolon}{::} ! Undefined control sequence. l.23982 \aliasA {:::}{ns-dblcolon}{:::} ! Undefined control sequence. l.23983 \keyword {programming}{ns-dblcolon} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23985 \begin{Description} \relax ! Undefined control sequence. l.23986 ...xported and internal variables, i.e.~\R {} objects ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23988 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23990 \begin{Usage} Underfull \hbox (badness 1365) in paragraph at lines 23975--23991 \OT1/cmr/m/n/10 NROW(1:12) 12 ns-dblcolonDouble Colon and Triple Colon Op-er -a- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23995 \]end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23997 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23998 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.23999 \item[\code{pkg}] package name: symbol or literal character string. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24000 \item[\code{name}] variable name: symbol or literal character string. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24001 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24002 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24004 \begin{Details} \relax ! Undefined control sequence. l.24005 For a package \pkg {pkg}, \code{pkg::name} returns the value of the ! Undefined control sequence. l.24005 For a package \pkg{pkg}, \code {pkg::name} returns the value of the ! Undefined control sequence. l.24006 exported variable \code {name} in namespace \code{pkg}, whereas ! Undefined control sequence. l.24006 ...variable \code{name} in namespace \code {pkg}, whereas ! Undefined control sequence. l.24007 \code {pkg:::name} returns the value of the internal variable ! Undefined control sequence. l.24008 \code {name}. The package namespace will be loaded if it was not ! Undefined control sequence. l.24014 Note that \code {pkg::name} does \strong{not} access the objects in the ! Undefined control sequence. l.24014 Note that \code{pkg::name} does \strong {not} access the objects in the ! Undefined control sequence. l.24015 environment \code {package:pkg} (which does not exist until the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24019 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24021 \begin{Note} \relax ! Undefined control sequence. l.24022 ...typically a design mistake to use \code {:::} ! Undefined control sequence. l.24025 \code {\LinkA{maintainer}{maintainer}} if you feel the need to access... ! Undefined control sequence. l.24025 \code{\LinkA {maintainer}{maintainer}} if you feel the need to access... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24027 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24029 \begin{SeeAlso} \relax ! Undefined control sequence. l.24030 \code {\LinkA{get}{get}} to access an object masked by another of the... ! Undefined control sequence. l.24030 \code{\LinkA {get}{get}} to access an object masked by another of the... ! Undefined control sequence. l.24031 \code {\LinkA{loadNamespace}{loadNamespace}}, \code{\LinkA{asNamespac... ! Undefined control sequence. l.24031 \code{\LinkA {loadNamespace}{loadNamespace}}, \code{\LinkA{asNamespac... ! Undefined control sequence. l.24031 ...A{loadNamespace}{loadNamespace}}, \code {\LinkA{asNamespace}{asNam... ! Undefined control sequence. l.24031 ...amespace}{loadNamespace}}, \code{\LinkA {asNamespace}{asNamespace}... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24033 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24035 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24036 \begin{ExampleCode} [232] ! You can't use `macro parameter character #' in vertical mode. l.24040 # # Beware -- use ':::' at your own risk! (see "Details") ! You can't use `macro parameter character #' in vertical mode. l.24040 ## Beware -- use ':::' at your own risk! (see "Details") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24042 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24043 \end{Examples} ! Undefined control sequence. l.24044 \HeaderA {ns-hooks}{Hooks for Namespace Events}{ns.Rdash.hooks} ! Undefined control sequence. l.24045 \aliasA {.Last.lib}{ns-hooks}{.Last.lib} ! Undefined control sequence. l.24046 \aliasA {.onAttach}{ns-hooks}{.onAttach} ! Undefined control sequence. l.24047 \aliasA {.onDetach}{ns-hooks}{.onDetach} ! Undefined control sequence. l.24048 \aliasA {.onLoad}{ns-hooks}{.onLoad} ! Undefined control sequence. l.24049 \aliasA {.onUnload}{ns-hooks}{.onUnload} ! Undefined control sequence. l.24050 \keyword {utilities}{ns-hooks} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24052 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24055 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24057 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 24040--24058 \OT1/cmr/m/n/10 .onAttachns-hooks.onAttach .onDetachns-hooks.onDetach .onLoadns - Underfull \hbox (badness 2538) in paragraph at lines 24040--24058 \OT1/cmr/m/n/10 hooks.onLoad .onUnloadns-hooks.onUnload utilitiesns-hooks Pack- ages can ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24065 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24067 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24068 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24069 \item[\code{libname}] a character string giving the library director... ! LaTeX Error: Lonely \item--perhaps a mi [31ssing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24071 \item[\code{pkgname}] a character string giving the name of the pack... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24072 \item[\code{libpath}] a character string giving the complete path to... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24073 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24074 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24076 \begin{Details} \relax ! Undefined control sequence. l.24077 After loading, \code {\LinkA{loadNamespace}{loadNamespace}} looks for... ! Undefined control sequence. l.24077 After loading, \code{\LinkA {loadNamespace}{loadNamespace}} looks for... ! Undefined control sequence. l.24078 named \code {.onLoad} and calls it (with two unnamed arguments) before ! Undefined control sequence. l.24081 When the package is attached (via \code {\LinkA{library}{library}} or ! Undefined control sequence. l.24081 ...e package is attached (via \code{\LinkA {library}{library}} or ! Undefined control sequence. l.24082 \code {\LinkA{attachNamespace}{attachNamespace}}), the hook function ... ! Undefined control sequence. l.24082 \code{\LinkA {attachNamespace}{attachNamespace}}), the hook function ... ! Undefined control sequence. l.24082 ...chNamespace}}), the hook function \code {.onAttach} is ! Undefined control sequence. l.24086 If a function \code {.onDetach} is in the namespace or \code{.Last.lib} ! Undefined control sequence. l.24086 ....onDetach} is in the namespace or \code {.Last.lib} ! Undefined control sequence. l.24088 argument) when the package is \code {\LinkA{detach}{detach}}ed. Bewa... ! Undefined control sequence. l.24088 argument) when the package is \code{\LinkA {detach}{detach}}ed. Bewa... ! Undefined control sequence. l.24089 might be called if \code {.onAttach} has failed, so it should be ! Undefined control sequence. l.24090 ...efensively. (It is called within \code {\LinkA{tryCatch}{tryCatch... ! Undefined control sequence. l.24090 ...ely. (It is called within \code{\LinkA {tryCatch}{tryCatch}}, so ! Undefined control sequence. l.24093 If a namespace is unloaded (via \code {\LinkA{unloadNamespace}{unload... ! Undefined control sequence. l.24093 ...namespace is unloaded (via \code{\LinkA {unloadNamespace}{unloadNa... ! Undefined control sequence. l.24094 function \code {.onUnload} is run (with a single argument) before final ! Undefined control sequence. l.24097 Note that the code in \code {.onLoad} and \code{.onUnload} should not ! Undefined control sequence. l.24097 ...at the code in \code{.onLoad} and \code {.onUnload} should not ! Undefined control sequence. l.24103 \code {.onLoad}, \code{.onUnload}, \code{.onAttach} and ! Undefined control sequence. l.24103 \code{.onLoad}, \code {.onUnload}, \code{.onAttach} and ! Undefined control sequence. l.24103 \code{.onLoad}, \code{.onUnload}, \code {.onAttach} and ! Undefined control sequence. l.24104 \code {.onDetach} are looked for as internal objects in the namespace ! Undefined control sequence. l.24105 and should not be exported (whereas \code {.Last.lib} should be). ! Undefined control sequence. l.24108 of an \R {} session unless the user arranges to do so (e.g., \emph{via} ! Undefined control sequence. l.24109 \code {\LinkA{.Last}{.Last}}). ! Undefined control sequence. l.24109 \code{\LinkA {.Last}{.Last}}). ! Undefined control sequence. l.24112 handled at load/unload times by the \code {.onLoad} and ! Undefined control sequence. l.24113 \code {.onUnload} hooks. For example, DLLs can be loaded (unless done ! Undefined control sequence. l.24114 by a \code {useDynLib} directive in the \file{NAMESPACE} file) and ! Undefined control sequence. l.24114 ...\code{useDynLib} directive in the \file {NAMESPACE} file) and ! Undefined control sequence. l.24115 initialized in \code {.onLoad} and unloaded in \code{.onUnload}. Use ! Undefined control sequence. l.24115 ...in \code{.onLoad} and unloaded in \code {.onUnload}. Use ! Undefined control sequence. l.24116 \code {.onAttach} only for actions that are needed only when the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24119 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24121 \begin{Section} {Good practice} ! Undefined control sequence. l.24123 messages given by \code {.onAttach}. These messages (and any essential ! Undefined control sequence. l.24124 ones from \code {.onLoad}) should use \code{\LinkA{packageStartupMess... ! Undefined control sequence. l.24124 ones from \code{.onLoad}) should use \code {\LinkA{packageStartupMess... ! Undefined control sequence. l.24124 ...\code{.onLoad}) should use \code{\LinkA {packageStartupMessage}{pa... [233] Chapter 8 [32]] ! Undefined control sequence. l.24127 There should be no calls to \code {library} nor \code{require} in these ! Undefined control sequence. l.24127 ...be no calls to \code{library} nor \code {require} in these ! Undefined control sequence. l.24129 \samp {Depends} field in the \file{DESCRIPTION} file: this ensures ! Undefined control sequence. l.24129 \samp{Depends} field in the \file {DESCRIPTION} file: this ensures ! Undefined control sequence. l.24136 Uses of \code {library} with argument \code{help} to display basic ! Undefined control sequence. l.24136 Uses of \code{library} with argument \code {help} to display basic ! Undefined control sequence. l.24137 ...tion about the package should use \code {format} on the ! Undefined control sequence. l.24139 \code {packageStartupMessage}. ! Undefined control sequence. l.24141 There should be no calls to \code {\LinkA{installed.packages}{install... ! Undefined control sequence. l.24141 There should be no calls to \code{\LinkA {installed.packages}{install... ! Undefined control sequence. l.24142 ...ery slow and may fail in versions of \R {} ! Undefined control sequence. l.24147 \code {\LinkA{library.dynam}{library.dynam}}) in \code{.onLoad} or a ... ! Undefined control sequence. l.24147 \code{\LinkA {library.dynam}{library.dynam}}) in \code{.onLoad} or a ... ! Undefined control sequence. l.24147 ...ibrary.dynam}{library.dynam}}) in \code {.onLoad} or a \code{useDy... ! Undefined control sequence. l.24147 ...y.dynam}}) in \code{.onLoad} or a \code {useDynLib} ! Undefined control sequence. l.24148 directive in the \file {NAMESPACE} file, and not in \code{.onAttach}. ! Undefined control sequence. l.24148 ...\file{NAMESPACE} file, and not in \code {.onAttach}. ! Undefined control sequence. l.24150 \code {\LinkA{library.dynam.unload}{library.dynam.unload}}) in \code{... ! Undefined control sequence. l.24150 \code{\LinkA {library.dynam.unload}{library.dynam.unload}}) in \code{... ! Undefined control sequence. l.24150 ...nload}{library.dynam.unload}}) in \code {.Last.lib} nor ! Undefined control sequence. l.24151 \code {.onDetach}, only in \code{.onUnload}. ! Undefined control sequence. l.24151 \code{.onDetach}, only in \code {.onUnload}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24152 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24154 \begin{SeeAlso} \relax ! Undefined control sequence. l.24155 \code {\LinkA{setHook}{setHook}} shows how users can set hooks on the... ! Undefined control sequence. l.24155 \code{\LinkA {setHook}{setHook}} shows how users can set hooks on the... ! Undefined control sequence. l.24158 \code {\LinkA{reg.finalizer}{reg.finalizer}} for hooks to be run at t... ! Undefined control sequence. l.24158 \code{\LinkA {reg.finalizer}{reg.finalizer}} for hooks to be run at t... ! Undefined control sequence. l.24160 \code {\LinkA{loadNamespace}{loadNamespace}} for more about namespaces. ! Undefined control sequence. l.24160 \code{\LinkA {loadNamespace}{loadNamespace}} for more about namespaces. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24161 \end{SeeAlso} ! Undefined control sequence. l.24162 \HeaderA {ns-load}{Loading and Unloading Name Spaces}{ns.Rdash.load} ! Undefined control sequence. l.24163 \aliasA {attachNamespace}{ns-load}{attachNamespace} ! Undefined control sequence. l.24164 \aliasA {isNamespaceLoaded}{ns-load}{isNamespaceLoaded} ! Undefined control sequence. l.24165 \aliasA {loadedNamespaces}{ns-load}{loadedNamespaces} ! Undefined control sequence. l.24166 \aliasA {loadNamespace}{ns-load}{loadNamespace} ! Undefined control sequence. l.24167 \aliasA {requireNamespace}{ns-load}{requireNamespace} ! Undefined control sequence. l.24168 \aliasA {unloadNamespace}{ns-load}{unloadNamespace} ! Undefined control sequence. l.24169 \keyword {data}{ns-load} ! Undefined control sequence. l.24170 \keyword {utilities}{ns-load} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24172 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24174 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24176 \begin{Usage} Underfull \hbox (badness 2469) in paragraph at lines 24160--24177 []\OT1/cmr/m/n/10 loadNamespaceloadNamespace for more about names-paces. ns- Underfull \hbox (badness 10000) in paragraph at lines 24160--24177 \OT1/cmr/m/n/10 loadattachNamespace isNamespaceLoadedns-loadisNamespaceLoaded Underfull \hbox (badness 10000) in paragraph at lines 24160--24177 \OT1/cmr/m/n/10 loadedNamespacesns-loadloadedNamespaces loadNamespacens- Underfull \hbox (badness 10000) in paragraph at lines 24160--24177 \OT1/cmr/m/n/10 loadloadNamespace requireNamespacens-loadrequireNamespace ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24187 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24189 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24190 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24191 \item[\code{ns}] string or name space object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24192 \item[\code{pos}] integer specifying position to attach. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24193 \item[\code{depends}] \code{NULL} or a character vector of dependenc... ! Undefined control sequence. l.24193 \item[\code{depends}] \code {NULL} or a character vector of dependenc... ! Undefined control sequence. l.24194 recorded in object \code {.Depends} in the package. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24195 \item[\code{package}] string naming the package/name space to load. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24196 \item[\code{lib.loc}] character vector specifying library search path. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24197 \item[\code{keep.source}] Now ignored except during package installa... ! Undefined control sequence. l.24198 ...more details see this argument to \code {\LinkA{library}{library}}. ! Undefined control sequence. l.24198 ...tails see this argument to \code{\LinkA {library}{library}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24200 \item[\code{partial}] logical; if true, stop just after loading code. [234] [33 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24201 \item[\code{versionCheck}] \code{NULL} or a version specification (a... ! Undefined control sequence. l.24201 \item[\code{versionCheck}] \code {NULL} or a version specification (a... ! Undefined control sequence. l.24202 with components \code {op} and \code{version})). ! Undefined control sequence. l.24202 with components \code{op} and \code {version})). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24203 \item[\code{quietly}] logical: should progress and error messages be... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24204 \item[\code{name}] string or `name', see \code{\LinkA{as.symbol}{as.... ! Undefined control sequence. l.24204 ...code{name}] string or `name', see \code {\LinkA{as.symbol}{as.symb... ! Undefined control sequence. l.24204 ...me}] string or `name', see \code{\LinkA {as.symbol}{as.symbol}}, ! Undefined control sequence. l.24205 of a package, e.g., \code {"stats"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24206 \item[\code{...}] further arguments to be passed to \code{loadNamesp... ! Undefined control sequence. l.24206 ...further arguments to be passed to \code {loadNamespace}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24207 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24208 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24210 \begin{Details} \relax ! Undefined control sequence. l.24211 The functions \code {loadNamespace} and \code{attachNamespace} are ! Undefined control sequence. l.24211 ...unctions \code{loadNamespace} and \code {attachNamespace} are ! Undefined control sequence. l.24212 usually called implicitly when \code {\LinkA{library}{library}} is us... ! Undefined control sequence. l.24212 ...lly called implicitly when \code{\LinkA {library}{library}} is use... ! Undefined control sequence. l.24216 \code {loadNamespace} loads the specified name space ]and registers it in ! Undefined control sequence. l.24219 ...as the corresponding arguments to \code {\LinkA{library}{library}}... ! Undefined control sequence. l.24219 ...corresponding arguments to \code{\LinkA {library}{library}}, whose ! Undefined control sequence. l.24221 comes to be chosen. After loading, \code {loadNamespace} looks for a ! Undefined control sequence. l.24222 hook function named \code {\LinkA{.onLoad}{.onLoad}} as an internal v... ! Undefined control sequence. l.24222 hook function named \code{\LinkA {.onLoad}{.onLoad}} as an internal v... ! Undefined control sequence. l.24227 `Licenses' in the help for \code {\LinkA{library}{library}}. ! Undefined control sequence. l.24227 `Licenses' in the help for \code{\LinkA {library}{library}}. ! Undefined control sequence. l.24229 \code {loadNamespace} does not attach the name space it loads to the ! Undefined control sequence. l.24230 search path. \code {attachNamespace} can be used to attach a frame ! Undefined control sequence. l.24232 ... is almost always done \emph{via} \code {\LinkA{library}{library}}... ! Undefined control sequence. l.24232 ...ost always done \emph{via} \code{\LinkA {library}{library}}). The ! Undefined control sequence. l.24233 hook function \code {\LinkA{.onAttach}{.onAttach}} is run after the n... ! Undefined control sequence. l.24233 hook function \code{\LinkA {.onAttach}{.onAttach}} is run after the n... ! Undefined control sequence. l.24236 \code {requireNamespace} is a wrapper for \code{loadNamespace} ! Undefined control sequence. l.24236 ...equireNamespace} is a wrapper for \code {loadNamespace} ! Undefined control sequence. l.24237 analogous to \code {\LinkA{require}{require}} that returns a logical ... ! Undefined control sequence. l.24237 analogous to \code{\LinkA {require}{require}} that returns a logical ... ! Undefined control sequence. l.24239 \code {loadedNamespaces} returns a character vector of the names of ! Undefined control sequence. l.24242 \code {isNamespaceLoaded(pkg)} is equivalent to but more efficient than ! Undefined control sequence. l.24243 \code {pkg \%in\% loadedNamespaces()}. ! Undefined control sequence. l.24245 \code {unloadNamespace} can be used to attempt to force a name space to ! Undefined control sequence. l.24247 \code {\LinkA{detach}{detach}}ed, thereby running a \code{\LinkA{.onD... ! Undefined control sequence. l.24247 \code{\LinkA {detach}{detach}}ed, thereby running a \code{\LinkA{.onD... ! Undefined control sequence. l.24247 ...ch}{detach}}ed, thereby running a \code {\LinkA{.onDetach}{.onDeta... ! Undefined control sequence. l.24247 ...ach}}ed, thereby running a \code{\LinkA {.onDetach}{.onDetach}} or ! Undefined control sequence. l.24248 \code {.Last.lib} function in the name space if one is exported. An ! Undefined control sequence. l.24251 \code {\LinkA{.onUnload}{.onUnload}} is run before removing the name ... ! Undefined control sequence. l.24251 \code{\LinkA {.onUnload}{.onUnload}} is run before removing the name ... ! Undefined control sequence. l.24254 See the comments in the help for \code {\LinkA{detach}{detach}} about... ! Undefined control sequence. l.24254 ...e comments in the help for \code{\LinkA {detach}{detach}} about some ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24256 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24258 \begin{Value} ! Undefined control sequence. l.24259 \code {attachNamespace} returns invisibly the package environment it ! Undefined control sequence. l.24262 \code {loadNamespace} returns the name space environment, either one ! Undefined control sequence. l.24265 \code {requireNamespace} returns \code{TRUE} if it succeeds or ! Undefined control sequence. l.24265 \code{requireNamespace} returns \code {TRUE} if it succeeds or ! Undefined control sequence. l.24266 \code {FALSE}. ! Undefined control sequence. l.24268 \code {loadedNamespaces} returns a \code{\LinkA{character}{character}... ! Undefined control sequence. l.24268 \code{loadedNamespaces} returns a \code {\LinkA{character}{character}... ! Undefined control sequence. l.24268 ...oadedNamespaces} returns a \code{\LinkA {character}{character}} ve... ! Undefined control sequence. l.24270 \code {unloadNamespace} returns \code{NULL}, invisibly. ! Undefined control sequence. l.24270 \code{unloadNamespace} returns \code {NULL}, invisibly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24271 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24273 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24275 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24277 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24279 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24281 \begin{SeeAlso} \relax ! Undefined control sequence. l.24282 \code {\LinkA{getNamespace}{getNamespace}}, \code{\LinkA{asNamespace}... ! Undefined control sequence. l.24282 \code{\LinkA {getNamespace}{getNamespace}}, \code{\LinkA{asNamespace}... ! Undefined control sequence. l.24282 ...nkA{getNamespace}{getNamespace}}, \code for immediate help. ... l.24285 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24287 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24288 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.24293 # # The string "foo" and the symbol 'foo' can be used interchangably... ! You can't use `macro parameter character #' in vertical mode. l.24293 ## The string "foo" and the symbol 'foo' can be used interchangably... Underfull \hbox (badness 10000) in paragraph at lines 24293--24297 []\OT1/cmr/m/n/10 The string "foo" and the sym-bol 'foo' can be used in-ter- Underfull \hbox (badness 10000) in paragraph at lines 24293--24297 \OT1/cmr/m/n/10 changably here: stopifnot( iden-ti-cal(isNamespaceLoaded( "foo" ), Underfull \hbox (badness 10000) in paragraph at lines 24293--24297 \OT1/cmr/m/n/10 FALSE), iden-ti-cal(isNamespaceLoaded(quote(foo)), FALSE), iden -ti- [235] ! You can't use `macro parameter character #' in horizontal mode. l.24298 hasS <- isNamespaceLoaded("splines") # (to restore if needed) ! You can't use `macro parameter character #' in horizontal mode. l.24299 Sns <- asNamespace("splines") # loads it if not already ! You can't use `macro parameter character #' in horizontal mode. l.24301 unloadNamespace(Sns) # unloading the NS 'object' ! You can't use `macro parameter character #' in horizontal mode. l.24303 if (hasS) loadNamespace("splines") # (restoring previous state) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24304 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24305 \end{Examples} ! Undefined control sequence. l.24306 \HeaderA {ns-topenv}{Top Level Environment}{ns.Rdash.topenv} ! Undefined control sequence. l.24307 \aliasA {topenv}{ns-topenv}{topenv} ! Undefined control sequence. l.24308 \keyword {programming}{ns-topenv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24310 \begin{Description} \relax ! Undefined control sequence. l.24311 Finding the top level \code {\LinkA{environment}{environment}} from a... ! Undefined control sequence. l.24311 Finding the top level \code{\LinkA {environment}{environment}} from a... ! Undefined control sequence. l.24312 \code {envir} and its enclosing environments. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24313 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24315 \begin{Usage} Underfull \hbox (badness 4120) in paragraph at lines 24298--24316 []\OT1/cmr/m/n/10 hasS <- is-Names-paceLoaded("splines") (to re-store if neede d) Sns Underfull \hbox (badness 2111) in paragraph at lines 24298--24316 \OT1/cmr/m/n/10 <- as-Names-pace("splines") loads it if not al-ready stopifnot ( is-Names- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24320 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24322 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24323 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24324 \item[\code{envir}] environment. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24326 \item[\code{matchThisEnv}] return this environment, if it matches be... ! Undefined control sequence. l.24328 \samp {topLevelEnvironment}, is set by \code{\LinkA{sys.source}{sys.s... ! Undefined control sequence. l.24328 ...p{topLevelEnvironment}, is set by \code {\LinkA{sys.source}{sys.so... ! Undefined control sequence. l.24328 ...velEnvironment}, is set by \code{\LinkA {sys.source}{sys.source}}, ! Undefined control sequence. l.24330 Supplying the argument as \code {NULL} means it will never match. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24331 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24332 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24334 \begin{Details} \relax ! Undefined control sequence. l.24335 \code {topenv} returns the first top level \code{\LinkA{environment}{... ! Undefined control sequence. l.24335 ...penv} returns the first top level \code {\LinkA{environment}{envir... ! Undefined control sequence. l.24335 ...eturns the first top level \code{\LinkA {environment}{environment}} ! Undefined control sequence. l.24336 found when searching \code {envir} and its enclosing environments. An ! Undefined control sequence. l.24338 ...ace, a package environment in the \code {\LinkA{search}{search}} ! Undefined control sequence. l.24338 ...package environment in the \code{\LinkA {search}{search}} ! Undefined control sequence. l.24339 path, or \code {\LinkA{.GlobalEnv}{.GlobalEnv}} . ! Undefined control sequence. l.24339 path, or \code{\LinkA {.GlobalEnv}{.GlobalEnv}} . ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24340 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24342 \begin{SeeAlso} \relax ! Undefined control sequence. l.24343 \code {\LinkA{environment}{environment}}, notably \code{parent.env()} on ! Undefined control sequence. l.24343 \code{\LinkA {environment}{environment}}, notably \code{parent.env()} on ! Undefined control sequence. l.24343 ...vironment}{environment}}, notably \code {parent.env()} on ! Undefined control sequence. l.24345 \code {\LinkA{loadNamespace}{loadNamespace}} for more on namespaces. ! Undefined control sequence. l.24345 \code{\LinkA {loadNamespace}{loadNamespace}} for more on namespaces. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24346 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24348 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24349 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.24351 topenv(new.env()) # also global env ! You can't use `macro parameter character #' in horizontal mode. l.24352 topenv(environment(ls))# namespace:base ! You can't use `macro parameter character #' in horizontal mode. l.24353 topenv(environment(lm))# namespace:stats ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24355 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24356 \end{Examples} ! Undefined control sequence. l.24357 \HeaderA {NULL}{The Null Object}{NULL} ! Undefined control sequence. l.24358 \aliasA {as.null}{NULL}{as.null} ! Undefined control sequence. l.24359 \methaliasA {as.null.default}{NULL}{as.null.default} ! Undefined control sequence. l.24360 \aliasA {is.null}{NULL}{is.null} ! Undefined control sequence. l.24361 \keyword {attribute}{NULL} ! Undefined control sequence. l.24362 \keyword {manip}{NULL} ! Undefined control sequence. l.24363 \keyword {list}{NULL} ! Undefined control sequence. l.24364 \keyword {sysdata}{NULL} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24366 \begin{Description} \relax ! Undefined control sequence. l.24367 \code {NULL} represents the null object in \R{}: it is a \LinkA{reser... ! Undefined control sequence. l.24367 ...{NULL} represents the null object in \R {}: it is a \LinkA{reserve... ! Undefined control sequence. l.24367 ...the null object in \R{}: it is a \LinkA {reserved}{reserved} ! Undefined control sequence. l.24368 word. \code {NULL} is often returned by expressions and functions ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24370 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24372 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 24357--24373 \OT1/cmr/m/n/10 NULLThe Null Ob-ject-NULL as.nullNULLas.null Underfull \hbox (badness 10000) in paragraph at lines 24357--24373 \OT1/cmr/m/n/10 as.null.defaultNULLas.null.default is.nullNULLis.null at-tribut eNULL ma- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24378 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24380 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24381 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24382 \item[\code{x}] an object to be tested or coerced. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24383 \item[\code{...}] ignored. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24384 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24385 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24387 \begin{Details} \relax ! Undefined control sequence. l.24388 \code {NULL} can be indexed (see \LinkA{Extract}{Extract}) in just ab... ! Undefined control sequence. l.24388 \code{NULL} can be indexed (see \LinkA {Extract}{Extract}) in just ab... ! Undefined control sequence. l.24390 always \code {NULL}. Objects with value \code{NULL} can be changed by ! Undefined control sequence. l.24390 ... \code{NULL}. Objects with value \code {NULL} can be changed by ! Undefined control sequence. l.24394 \code {NULL} is also used as the empty \LinkA{pairlist}{pairlist}: se... ! Undefined control sequence. l.24394 ...{NULL} is also used as the empty \LinkA {pairlist}{pairlist}: see the ! Undefined control sequence. l.24396 encounter \code {NULL} being promoted to an empty list. ! Undefined control sequence. l.24398 Objects with value \code {NULL} cannot have attributes as there is only ! Undefined control sequence. l.24400 (\code {\LinkA{attr}{attr}}) or promote the object to an empty list with ! Undefined control sequence. l.24400 (\code{\LinkA {attr}{attr}}) or promote the object to an empty list with ! Undefined control sequence. l.24401 attribute(s) (\code {\LinkA{attributes}{attributes}} and \code{\LinkA... ! Undefined control sequence. l.24401 attribute(s) (\code{\LinkA {attributes}{attributes}} and \code{\LinkA... ! Undefined control sequence. l.24401 ...inkA{attributes}{attributes}} and \code {\LinkA{structure}{structu... ! Undefined control sequence. l.24401 ...tributes}{attributes}} and \code{\LinkA {structure}{structure}}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24402 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24404 \begin{Value} ! Undefined control sequence. l.24405 \code {as.null} ignores its argument and returns \code{NULL}. ! Undefined control sequence. l.24405 ... ignores its argument and returns \code {NULL}. ! Undefined control sequence. l.24407 \code {is.null} returns \code{TRUE} if its argument's value ! Undefined control sequence. l.24407 \code{is.null} returns \code {TRUE} if its argument's value ! Undefined control sequence. l.24408 is \code {NULL} and \code{FALSE} otherwise. ! Undefined control sequence. l.24408 is \code{NULL} and \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24409 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24411 \begin{Note} \relax ! Undefined control sequence. l.24412 \code {is.null} is a \LinkA{primitive}{primitive} function. ! Undefined control sequence. l.24412 \code{is.null} is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24413 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24415 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24419 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24421 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24422 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.24423 is.null(list()) # FALSE (on purpose!) ! You can't use `macro parameter character #' in horizontal mode. l.24424 is.null(pairlist()) # TRUE ! You can't use `macro parameter character #' in horizontal mode. l.24425 is.null(integer(0)) # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.24426 is.null(logical(0)) # FALSE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24428 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24429 \end{Examples} ! Undefined control sequence. l.24430 \HeaderA {numeric}{Numeric Vectors}{numeric} ! Undefined control sequence. l.24431 \aliasA {as.numeric}{numeric}{as.numeric} ! Undefined control sequence. l.24432 \aliasA {is.numeric}{numeric}{is.numeric} ! Undefined control sequence. l.24433 \methaliasA {is.numeric.Date}{numeric}{is.numeric.Date} ! Undefined control sequence. l.24434 \methaliasA {is.numeric.POSIXt}{numeric}{is.numeric.POSIXt} ! Undefined control sequence. l.24435 \keyword {classes}{numeric} ! Undefined control sequence. l.24436 \keyword {attribute}{numeric} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24438 \begin{Description} \relax ! Undefined control sequence. l.24439 Creates or coerces objects of type \code {"numeric"}. ! Undefined control sequence. l.24440 \code {is.numeric} is a more general test of an object being ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24442 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24444 \begin{Usage} Underfull \hbox (badness 1596) in paragraph at lines 24407--24445 []\OT1/cmr/m/n/10 is.null re-turns TRUE if its ar-gu-ment's value is NULL and F ALSE Underfull \hbox (badness 2318) in paragraph at lines 24407--24445 \OT1/cmr/m/n/10 = "c")) nu-mer-ic-Nu-meric Vec-torsnu-meric as.numericnumeric as.numeric Underfull \hbox (badness 10000) in paragraph at lines 24407--24445 \OT1/cmr/m/n/10 is.numericnumericis.numeric is.numeric.Datenumericis.numeric.Da te Underfull \hbox (badness 10000) in paragraph at lines 24407--24445 \OT1/cmr/m/n/10 is.numeric.POSIXtnumericis.numeric.POSIXt class-es-nu-meric at- tributenu- [236] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24450 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24452 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24453 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24454 \item[\code{length}] A non-negative integer specifying the desired l... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24457 \item[\code{x}] object to be coerced or tested. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24458 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24459 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24460 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24462 \begin{Details} \relax ! Undefined control sequence. l.24463 \code {numeric} is identical to \code{\LinkA{double}{double}} (and \c... ! Undefined control sequence. l.24463 \code{numeric} is identical to \code {\LinkA{double}{double}} (and \c... ! Undefined control sequence. l.24463 ...e{numeric} is identical to \code{\LinkA {double}{double}} (and \co... ! Undefined control sequence. l.24463 ...code{\LinkA{double}{double}} (and \code {real}). ! Undefined control sequence. l.24465 element equal to \code {0}. ! Undefined control sequence. l.24467 \code {as.numeric} is a generic function, but S3 methods must be ! Undefined control sequence. l.24468 written for \code {\LinkA{as.double}{as.double}}. It is identical to... ! Undefined control sequence. l.24468 written for \code{\LinkA {as.double}{as.double}}. It is identical to... ! Undefined control sequence. l.24468 ...{as.double}}. It is identical to \code {as.double}. ! Undefined control sequence. l.24470 \code {is.numeric} is an \LinkA{internal generic}{internal generic} \... ! Undefined control sequence. l.24470 \code{is.numeric} is an \LinkA {internal generic}{internal generic} \... ! Undefined control sequence. l.24470 ...ternal generic}{internal generic} \code {primitive} ! Undefined control sequence. l.24472 see \LinkA {InternalMethods}{InternalMethods}. It is \strong{not} th... ! Undefined control sequence. l.24472 ...thods}{InternalMethods}. It is \strong {not} the same as ! Undefined control sequence. l.24473 \code {\LinkA{is.double}{is.double}}. Factors are handled by the def... ! Undefined control sequence. l.24473 \code{\LinkA {is.double}{is.double}}. Factors are handled by the def... ! Undefined control sequence. l.24474 and there are methods for classes \code {"\LinkA{Date}{Date}"}, ! Undefined control sequence. l.24474 ...e are methods for classes \code{"\LinkA {Date}{Date}"}, ! Undefined control sequence. l.24475 \code {"\LinkA{POSIXt}{POSIXt}"} and \code{"\LinkA{difftime}{difftime... ! Undefined control sequence. l.24475 \code{"\LinkA {POSIXt}{POSIXt}"} and \code{"\LinkA{difftime}{difftime... ! Undefined control sequence. l.24475 \code{"\LinkA{POSIXt}{POSIXt}"} and \code {"\LinkA{difftime}{difftime... ! Undefined control sequence. l.24475 ...nkA{POSIXt}{POSIXt}"} and \code{"\LinkA {difftime}{difftime}"} (al... ! Undefined control sequence. l.24476 return false). Methods for \code {is.numeric} should only return true ! Undefined control sequence. l.24477 if the base type of the class is \code {double} or \code{integer} ! Undefined control sequence. l.24477 ... of the class is \code{double} or \code {integer} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24481 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24483 \begin{Value} ! Undefined control sequence. l.24484 for \code {numeric} and \code{as.numeric} see \code{\LinkA{double}{do... ! Undefined control sequence. l.24484 for \code{numeric} and \code {as.numeric} see \code{\LinkA{double}{do... ! Undefined control sequence. l.24484 ...umeric} and \code{as.numeric} see \code {\LinkA{double}{double}}. ! Undefined control sequence. l.24484 ... and \code{as.numeric} see \code{\LinkA {double}{double}}. ! Undefined control sequence. l.24486 The default method for \code {is.numeric} returns \code{TRUE} ! Undefined control sequence. l.24486 ...hod for \code{is.numeric} returns \code {TRUE} ! Undefined control sequence. l.24487 if its argument is of \LinkA {mode}{mode} \code{"numeric"} ! Undefined control sequence. l.24487 ...argument is of \LinkA{mode}{mode} \code {"numeric"} ! Undefined control sequence. l.24488 (\LinkA {type}{type} \code{"double"} or type \code{"integer"}) and not a ! Undefined control sequence. l.24488 (\LinkA{type}{type} \code {"double"} or type \code{"integer"}) and not a ! Undefined control sequence. l.24488 ...pe}{type} \code{"double"} or type \code {"integer"}) and not a ! Undefined control sequence. l.24489 factor, and \code {FALSE} otherwise. That is, ! Undefined control sequence. l.24490 \code {is.integer(x) || is.double(x)}, or ! Undefined control sequence. l.24491 \code {(mode(x) == "numeric") \&\& !is.factor(x)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24492 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24494 \begin{Section} {Warning} ! Undefined control sequence. l.24495 If \code {x} is a \code{\LinkA{factor}{factor}}, \code{as.numeric} wi... ! Undefined control sequence. l.24495 If \code{x} is a \code {\LinkA{factor}{factor}}, \code{as.numeric} wi... ! Undefined control sequence. l.24495 If \code{x} is a \code{\LinkA {factor}{factor}}, \code{as.numeric} wi... ! Undefined control sequence. l.24495 ... a \code{\LinkA{factor}{factor}}, \code {as.numeric} will return ! Undefined control sequence. l.24497 ...s as it may not correspond to the \code {factor} ! Undefined control sequence. l.24498 \code {\LinkA{levels}{levels}}, see the `Warning' section in ! Undefined control sequence. l.24498 \code{\LinkA {levels}{levels}}, see the `Warning' section in ! Undefined control sequence. l.24499 \code {\LinkA{factor}{factor}} (and the 2nd example below). ! Undefined control sequence. l.24499 \code{\LinkA {factor}{factor}} (and the 2nd example below). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24500 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24502 \begin{Section} {S4 methods} ! Undefined control sequence. l.24503 \code {as.numeric} and \code{is.numeric} are internally S4 generic and ! Undefined control sequence. l.24503 \code{as.numeric} and \code {is.numeric} are internally S4 generic and ! Undefined control sequence. l.24504 ...ds can be set for them \emph{via} \code {setMethod}. ! Undefined control sequence. l.24506 To ensure that \code {as.numeric} and \code{as.double} ! Undefined control sequence. l.24506 To ensure that \code{as.numeric} and \code {as.double} ! Undefined control sequence. l.24507 ...l, S4 methods can only be set for \code {as.numeric}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. l.24508 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24510 \begin{Section} {Note on names} ! Undefined control sequence. l.24511 It is a historical anomaly that \R {} has two names for its ! Undefined control sequence. l.24512 floating-point vectors, \code {\LinkA{double}{double}} and \code{\Lin... ! Undefined control sequence. l.24512 floating-point vectors, \code{\LinkA {double}{double}} and \code{\Lin... ! Undefined control sequence. l.24512 ...\code{\LinkA{double}{double}} and \code {\LinkA{numeric}{numeric}} ! Undefined control sequence. l.24512 ...LinkA{double}{double}} and \code{\LinkA {numeric}{numeric}} ! Undefined control sequence. l.24513 (and formerly had \code {real}). ! Undefined control sequence. l.24515 \code {double} is the name of the \LinkA{type}{type}. ! Undefined control sequence. l.24515 \code{double} is the name of the \LinkA {type}{type}. ! Undefined control sequence. l.24516 \code {numeric} is the name of the \LinkA{mode}{mode} and also of the... ! Undefined control sequence. l.24516 \code{numeric} is the name of the \LinkA {mode}{mode} and also of the... ! Undefined control sequence. l.24517 \LinkA {class}{class}. As an S4 formal class, use \code{"numeric"}. ! Undefined control sequence. l.24517 ...ass}. As an S4 formal class, use \code {"numeric"}. ! Undefined control sequence. l.24519 The potential confusion is that \R {} has used \emph{\LinkA{mode}{mode}} ! Undefined control sequence. \LinkA l.24519 ...\R{} has used \emph{\LinkA{mode}{mode}} ! Undefined control sequence. l.24520 \code {"numeric"} to mean `double or integer', which conflicts ! Undefined control sequence. l.24521 with the S4 usage. Thus \code {is.numeric} tests the mode, not the ! Undefined control sequence. l.24522 class, but \code {as.numeric} (which is identical to \code{as.double}) ! Undefined control sequence. l.24522 ...s.numeric} (which is identical to \code {as.double}) ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24524 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24526 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24530 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24532 \begin{SeeAlso} \relax ! Undefined control sequence. l.24533 \code {\LinkA{double}{double}}, \code{\LinkA{integer}{integer}}, \cod... ! Undefined control sequence. l.24533 \code{\LinkA {double}{double}}, \code{\LinkA{integer}{integer}}, \cod... ! Undefined control sequence. l.24533 \code{\LinkA{double}{double}}, \code {\LinkA{integer}{integer}}, \cod... ! Undefined control sequence. l.24533 ...e{\LinkA{double}{double}}, \code{\LinkA {integer}{integer}}, \code... ! Undefined control sequence. l.24533 ... \code{\LinkA{integer}{integer}}, \code {\LinkA{storage.mode}{stor... ! Undefined control sequence. l.24533 ...\LinkA{integer}{integer}}, \code{\LinkA {storage.mode}{storage.mod... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24534 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24536 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24537 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.24538 as.numeric(c("-.1"," 2.7 ","B")) # (-0.1, 2.7, NA) + warning [237] ! You can't use `macro parameter character #' in horizontal mode. l.24540 as.numeric(factor(5:10)) # not what you'd expect ! You can't use `macro parameter character #' in horizontal mode. l.24542 # # what you typically meant and want: ! You can't use `macro parameter character #' in horizontal mode. l.24542 ## what you typically meant and want: ! You can't use `macro parameter character #' in horizontal mode. l.24544 # # the same, considerably (for long factors) more efficient: ! You can't use `macro parameter character #' in horizontal mode. l.24544 ## the same, considerably (for long factors) more efficient: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24546 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24547 \end{Examples} ! Undefined control sequence. l.24548 \HeaderA {NumericConstants}{Numeric Constants}{NumericConstants} ! Undefined control sequence. l.24549 \aliasA {0x1}{NumericConstants}{0x1} ! Undefined control sequence. l.24550 \aliasA {1i}{NumericConstants}{1i} ! Undefined control sequence. l.24551 \aliasA {1L}{NumericConstants}{1L} ! Undefined control sequence. l.24552 \keyword {documentation}{NumericConstants} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24554 \begin{Description} \relax ! Undefined control sequence. l.24555 How \R {} parses numeric constants. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24556 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24558 \begin{Details} \relax ! Undefined control sequence. l.24559 \R {} parses numeric constants in its input in a very similar way to C99 Underfull \hbox (badness 10000) in paragraph at lines 24540--24561 \OT1/cmr/m/n/10 meric Con-stantsNu-mer-ic-Constants 0x1NumericConstants0x1 1iNu -mer-ic- Underfull \hbox (badness 2790) in paragraph at lines 24540--24561 \OT1/cmr/m/n/10 Constants1i 1LNu-mer-ic-Constants1L doc-u-men-ta-tion-Nu-mer-ic -Constants How ! Undefined control sequence. l.24562 \code {\LinkA{Inf}{Inf}} and \code{\LinkA{NaN}{NaN}} are numeric cons... ! Undefined control sequence. l.24562 \code{\LinkA {Inf}{Inf}} and \code{\LinkA{NaN}{NaN}} are numeric cons... ! Undefined control sequence. l.24562 \code{\LinkA{Inf}{Inf}} and \code {\LinkA{NaN}{NaN}} are numeric cons... ! Undefined control sequence. l.24562 \code{\LinkA{Inf}{Inf}} and \code{\LinkA {NaN}{NaN}} are numeric cons... ! Undefined control sequence. l.24563 \code {\LinkA{typeof}{typeof}(.) "double"}). In text input (e.g., in ! Undefined control sequence. l.24563 \code{\LinkA {typeof}{typeof}(.) "double"}). In text input (e.g., in ! Undefined control sequence. l.24564 \code {\LinkA{scan}{scan}} and \code{\LinkA{as.double}{as.double}}), ... ! Undefined control sequence. l.24564 \code{\LinkA {scan}{scan}} and \code{\LinkA{as.double}{as.double}}), ... ! Undefined control sequence. l.24564 \code{\LinkA{scan}{scan}} and \code {\LinkA{as.double}{as.double}}), ... ! Undefined control sequence. l.24564 \code{\LinkA{scan}{scan}} and \code{\LinkA {as.double}{as.double}}), ... ! Undefined control sequence. l.24565 ignoring case as is \code {infinity} as an alternative to \code{Inf}. ! Undefined control sequence. l.24565 ...de{infinity} as an alternative to \code {Inf}. ! Undefined control sequence. l.24566 \code {\LinkA{NA\_real\_}{NA.Rul.real.Rul.}} and \code{\LinkA{NA\_int... ! Undefined control sequence. l.24566 \code{\LinkA {NA\_real\_}{NA.Rul.real.Rul.}} and \code{\LinkA{NA\_int... ! Undefined control sequence. l.24566 ...A\_real\_}{NA.Rul.real.Rul.}} and \code {\LinkA{NA\_integer\_}{NA.... ! Undefined control sequence. l.24566 ...\_}{NA.Rul.real.Rul.}} and \code{\LinkA {NA\_integer\_}{NA.Rul.int... ! Undefined control sequence. l.24567 types \code {"double"} and \code{"integer"} representing missing ! Undefined control sequence. l.24567 types \code{"double"} and \code {"integer"} representing missing ! Undefined control sequence. l.24570 \code {L}. ! Undefined control sequence. l.24572 Hexadecimal constants start with \code {0x} or \code{0X} followed by ! Undefined control sequence. l.24572 ...constants start with \code{0x} or \code {0X} followed by ! Undefined control sequence. l.24573 a nonempty sequence from \code {0-9 a-f A-F .} which is interpreted as a ! Undefined control sequence. l.24575 exponent consists of a \code {P} or \code{p} followed by an optional ! Undefined control sequence. l.24575 exponent consists of a \code{P} or \code {p} followed by an optional ! Undefined control sequence. l.24578 \code {0x123p456} is \eqn{291 \times 2^{456}}{}. ! Undefined control sequence. l.24578 \code{0x123p456} is \eqn {291 \times 2^{456}}{}. ! Missing $ inserted. $ l.24578 \code{0x123p456} is \eqn{291 \times 2^{456}}{}. ! Extra }, or forgotten $. l.24578 ...{0x123p456} is \eqn{291 \times 2^{456}} {}. ! Missing $ inserted. $ l.24579 ! Undefined control sequence. l.24582 ...A decimal exponent consists of an \code {E} or ! Undefined control sequence. l.24583 \code {e} followed by an optional plus or minus sign followed by a ! Undefined control sequence. l.24588 overflow to \code {Inf} or underflow to \code{0.0}. ! Undefined control sequence. l.24588 ...low to \code{Inf} or underflow to \code {0.0}. ! Undefined control sequence. l.24590 ... constant immediately followed by \code {i} is regarded as an ! Undefined control sequence. l.24591 imaginary \LinkA {complex}{complex} number. ! Undefined control sequence. l.24593 ... constant immediately followed by \code {L} is regarded as an ! Undefined control sequence. l.24594 \code {\LinkA{integer}{integer}} number when possible (and with a war... ! Undefined control sequence. l.24594 \code{\LinkA {integer}{integer}} number when possible (and with a war... ! Undefined control sequence. l.24595 contains a \code {"."}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24603 \end{Details} ! Missing } inserted. } l.24603 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24605 \begin{Note} \relax ! Undefined control sequence. l.24610 \R {}'s own C code is used to convert constants to binary numbers, so... ! Undefined control sequence. l.24613 the handling of numbers less than \code {\LinkA{.Machine}{.Machine}\$... ! Undefined control sequence. l.24613 ...dling of numbers less than \code{\LinkA {.Machine}{.Machine}\$doub... ! Undefined control sequence. l.24614 The same code is used by \code {\LinkA{scan}{scan}}. ! Undefined control sequence. l.24614 The same code is used by \code{\LinkA {scan}{scan}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24615 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24617 \begin{SeeAlso} \relax ! Undefined control sequence. l.24618 \code {\LinkA{Syntax}{Syntax}}. ! Undefined control sequence. l.24618 \code{\LinkA {Syntax}{Syntax}}. ! Undefined control sequence. l.24619 For complex numbers, see \code {\LinkA{complex}{complex}}. ! Undefined control sequence. l.24619 For complex numbers, see \code{\LinkA {complex}{complex}}. ! Undefined control sequence. l.24620 \code {\LinkA{Quotes}{Quotes}} for the parsing of character constants, ! Undefined control sequence. l.24620 \code{\LinkA {Quotes}{Quotes}} for the parsing of character constants, ! Undefined control sequence. l.24621 \code {\LinkA{Reserved}{Reserved}} for the ``reserved words'' in \R{}. ! Undefined control sequence. l.24621 \code{\LinkA {Reserved}{Reserved}} for the ``reserved words'' in \R{}. ! Undefined control sequence. l.24621 ...rved}} for the ``reserved words'' in \R {}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24622 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24624 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24625 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.24626 # # You can create numbers using fixed or scientific formatting. ! You can't use `macro parameter character #' in horizontal mode. l.24626 ## You can create numbers using fixed or scientific formatting. ! You can't use `macro parameter character #' in vertical mode. l.24631 # # The resulting objects have class numeric and type double. ! You can't use `macro parameter character #' in vertical mode. l.24631 ## The resulting objects have class numeric and type double. [238] ! You can't use `macro parameter character #' in vertical mode. l.24635 # # This holds even if what you typed looked like an integer. ! You can't use `macro parameter character #' in vertical mode. l.24635 ## This holds even if what you typed looked like an integer. ! You can't use `macro parameter character #' in vertical mode. l.24639 # # If you actually wanted integers, use an "L" suffix. ! You can't use `macro parameter character #' in vertical mode. l.24639 ## If you actually wanted integers, use an "L" suffix. ! You can't use `macro parameter character #' in vertical mode. l.24643 # # These are equal but not identical ! You can't use `macro parameter character #' in vertical mode. l.24643 ## These are equal but not identical ! You can't use `macro parameter character #' in vertical mode. l.24647 # # You can write numbers between 0 and 1 without a leading "0" ! You can't use `macro parameter character #' in vertical mode. l.24647 ## You can write numbers between 0 and 1 without a leading "0" ! You can't use `macro parameter character #' in horizontal mode. l.24648 # # (but typically this makes code harder to read) ! You can't use `macro parameter character #' in horizontal mode. l.24648 ## (but typically this makes code harder to read) ! You can't use `macro parameter character #' in horizontal mode. l.24651 sqrt(1i) # remember elementary math? Underfull \hbox (badness 1953) in paragraph at lines 24651--24654 []\OT1/cmr/m/n/10 sqrt(1i) re-mem-ber el-e-men-tary math? utils::str(0xA0) ide n-ti-cal(1L, ! You can't use `macro parameter character #' in vertical mode. l.24655 # # You can combine the "0x" prefix with the "L" suffix : ! You can't use `macro parameter character #' in vertical mode. l.24655 ## You can combine the "0x" prefix with the "L" suffix : ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24657 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24658 \end{Examples} ! Undefined control sequence. l.24659 \HeaderA {numeric\_version}{Numeric Versions}{numeric.Rul.version} ! Undefined control sequence. l.24660 \aliasA {\$.package\_version}{numeric\_version}{.Rdol..package.Rul.ve... ! Undefined control sequence. l.24661 \aliasA {.decode\_numeric\_version}{numeric\_version}{.decode.Rul.num... ! Undefined control sequence. l.24662 \aliasA {.encode\_numeric\_version}{numeric\_version}{.encode.Rul.num... ! Undefined control sequence. l.24663 \aliasA {.make\_numeric\_version}{numeric\_version}{.make.Rul.numeric... ! Undefined control sequence. l.24664 \aliasA {anyNA.numeric\_version}{numeric\_version}{anyNA.numeric.Rul.... ! Undefined control sequence. l.24665 \aliasA {as.character.numeric\_version}{numeric\_version}{as.characte... ! Undefined control sequence. l.24666 \aliasA {as.data.frame.numeric\_version}{numeric\_version}{as.data.fr... ! Undefined control sequence. l.24667 \aliasA {as.list.numeric\_version}{numeric\_version}{as.list.numeric.... ! Undefined control sequence. l.24668 \aliasA {as.numeric\_version}{numeric\_version}{as.numeric.Rul.version} ! Undefined control sequence. l.24669 \aliasA {as.package\_version}{numeric\_version}{as.package.Rul.version} ! Undefined control sequence. l.24670 \aliasA {c.numeric\_version}{numeric\_version}{c.numeric.Rul.version} ! Undefined control sequence. l.24671 \aliasA {duplicated.numeric\_version}{numeric\_version}{duplicated.nu... ! Undefined control sequence. l.24672 \aliasA {format.numeric\_version}{numeric\_version}{format.numeric.Ru... ! Undefined control sequence. l.24673 \aliasA {getRversion}{numeric\_version}{getRversion} ! Undefined control sequence. l.24674 \aliasA {is.na.numeric\_version}{numeric\_version}{is.na.numeric.Rul.... ! Undefined control sequence. l.24675 \aliasA {is.na<\Rdash{}.numeric\_version}{numeric\_version}{is.na<.Rd... ! Undefined control sequence. l.24675 \aliasA{is.na<\Rdash {}.numeric\_version}{numeric\_version}{is.na<.Rd... ! Undefined control sequence. l.24676 \aliasA {is.numeric\_version}{numeric\_version}{is.numeric.Rul.version} ! Undefined control sequence. l.24677 \aliasA {is.package\_version}{numeric\_version}{is.package.Rul.version} ! Undefined control sequence. l.24678 \aliasA {Ops.numeric\_version}{numeric\_version}{Ops.numeric.Rul.vers... ! Undefined control sequence. l.24679 \aliasA {package\_version}{numeric\_version}{package.Rul.version} ! Undefined control sequence. l.24680 \aliasA {print.numeric\_version}{numeric\_version}{print.numeric.Rul.... ! Undefined control sequence. l.24681 \aliasA {rep.numeric\_version}{numeric\_version}{rep.numeric.Rul.vers... ! Undefined control sequence. l.24682 \aliasA {R\_system\_version}{numeric\_version}{R.Rul.system.Rul.version} ! Undefined control sequence. l.24683 \aliasA {Summary.numeric\_version}{numeric\_version}{Summary.numeric.... ! Undefined control sequence. l.24684 \aliasA {unique.numeric\_version}{numeric\_version}{unique.numeric.Ru... ! Undefined control sequence. l.24685 \aliasA {xtfrm.numeric\_version}{numeric\_version}{xtfrm.numeric.Rul.... ! Undefined control sequence. l.24686 \aliasA {[.numeric\_version}{numeric\_version}{[.numeric.Rul.version} ! Undefined control sequence. l.24687 \aliasA {[<\Rdash{}.numeric\_version}{numeric\_version}{[<.Rdash..num... ! Undefined control sequence. l.24687 \aliasA{[<\Rdash {}.numeric\_version}{numeric\_version}{[<.Rdash..num... ! Undefined control sequence. l.24688 \aliasA {[[.numeric\_version}{numeric\_version}{[[.numeric.Rul.version} ! Undefined control sequence. l.24689 \aliasA {[[<\Rdash{}.numeric\_version}{numeric\_version}{[[<.Rdash..n... ! Undefined control sequence. l.24689 \aliasA{[[<\Rdash {}.numeric\_version}{numeric\_version}{[[<.Rdash..n... ! Undefined control sequence. l.24690 \keyword {utilities}{numeric\_version} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24692 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24695 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24697 \begin{Usage} Underfull \hbox (badness 3942) in paragraph at lines 24655--24698 []\OT1/cmr/m/n/10 You can com-bine the "0x" pre-fix with the "L" suf-fix : iden - Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 ti-cal(0xFL, as.integer(15)) nu-meric[]versionNumeric Ver-sio n-snu- Underfull \hbox (badness 5036) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 meric.Rul.version $.pack-age[]versionnumeric[]version.Rdol..pac kage.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 .de-code[]numeric[]versionnumeric[]version.decode.Rul.numeric.R ul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 .en-code[]numeric[]versionnumeric[]version.encode.Rul.numeric.R ul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 .make[]numeric[]versionnumeric[]version.make.Rul.numeric.Rul.ve rsion Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 anyNA.numeric[]versionnumeric[]versionanyNA.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 as.character.numeric[]versionnumeric[]versionas.character.numer ic.Rul.version Overfull \hbox (2.56184pt too wide) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 as.data.frame.numeric[]versionnumeric[]versionas.data.frame.num eric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 as.list.numeric[]versionnumeric[]versionas.list.numeric.Rul.ver sion Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 as.numeric[]versionnumeric[]versionas.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 as.package[]versionnumeric[]versionas.package.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 c.numeric[]versionnumeric[]versionc.numeric.Rul.version du-pli- Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 cated.numeric[]versionnumeric[]versionduplicated.numeric.Rul.ve rsion for- Overfull \hbox (36.99515pt too wide) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 meric[]versiongetRversion is.na.numeric[]versionnumeric[]versio nis.na.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 is.na<.numeric[]versionnumeric[]versionis.na<.Rdash..numeric.Ru l.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 is.numeric[]versionnumeric[]versionis.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 is.package[]versionnumeric[]versionis.package.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 Ops.numeric[]versionnumeric[]versionOps.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 pack-age[]versionnumeric[]versionpackage.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 print.numeric[]versionnumeric[]versionprint.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 rep.numeric[]versionnumeric[]versionrep.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 R[]system[]versionnumeric[]versionR.Rul.system.Rul.version Sum- Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 mary.numeric[]versionnumeric[]versionSummary.numeric.Rul.versio n Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 unique.numeric[]versionnumeric[]versionunique.numeric.Rul.versi on Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 xtfrm.numeric[]versionnumeric[]versionxtfrm.numeric.Rul.version Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 [.nu-meric[]versionnumeric[]version[.numeric.Rul.version [<.nu- Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 meric[]versionnumeric[]version[<.Rdash..numeric.Rul.version [[. nu- Underfull \hbox (badness 10000) in paragraph at lines 24655--24698 \OT1/cmr/m/n/10 meric[]versionnumeric[]version[[.numeric.Rul.version [[<.nu- Underfull \hbox (badness 10000) in paentering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:ragraph at lines 24655--24698 \OT1/cmr/m/n/10 meric[]versionnumeric[]version[[<.Rdash..numeric.Rul.version ut il-i-ties-nu- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24704 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24706 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24707 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24708 \item[\code{x}] a character vector with suitable numeric version str... ! Undefined control sequence. l.24709 `Details'); for \code {package\_version}, alternatively an R ! Undefined control sequence. l.24710 version object as obtained by \code {\LinkA{R.version}{R.version}}. ! Undefined control sequence. l.24710 version object as obtained by \code{\LinkA {R.version}{R.version}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24711 \item[\code{strict}] a logical indicating whether invalid numeric ve... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24713 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24714 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24716 \begin{Details} \relax ! Undefined control sequence. l.24718 usually (e.g., in package \file {DESCRIPTION} files) represented as ! Undefined control sequence. l.24720 separated by single \samp {.} or \samp{-} characters. \R{} package ! Undefined control sequence. l.24720 separated by single \samp{.} or \samp {-} characters. \R{} package ! Undefined control sequence. l.24720 ...le \samp{.} or \samp{-} characters. \R {} package ! Undefined control sequence. l.24721 ...st of at least two such integers, an \R {} system version [239 pdf, fonts,] ! Undefined control sequence. l.24724 Functions \code {numeric\_version}, \code{package\_version} and ! Undefined control sequence. l.24724 Functions \code{numeric\_version}, \code {package\_version} and ! Undefined control sequence. l.24725 \code {R\_system\_version} create a representation from such strings (if ! Undefined control sequence. l.24731 \code {getRversion} returns the version of the running \R{} as an R ! Undefined control sequence. l.24731 ...} returns the version of the running \R {} as an R ! Undefined control sequence. l.24734 The \code {[[} operator extracts or replaces a single version. To ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24736 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24738 \begin{SeeAlso} \relax ! Undefined control sequence. l.24739 \code {\LinkA{compareVersion}{compareVersion}}; ! Undefined control sequence. l.24739 \code{\LinkA {compareVersion}{compareVersion}}; ! Undefined control sequence. l.24740 \code {\LinkA{packageVersion}{packageVersion}} for the version of a s... ! Undefined control sequence. l.24740 \code{\LinkA {packageVersion}{packageVersion}} for the version of a s... ! Undefined control sequence. l.24740 ...sion}} for the version of a specific \R {} package. ! Undefined control sequence. l.24741 \code {\LinkA{R.version}{R.version}} etc for the version of \R{} (and... ! Undefined control sequence. l.24741 \code{\LinkA {R.version}{R.version}} etc for the version of \R{} (and... ! Undefined control sequence. l.24741 ...}{R.version}} etc for the version of \R {} (and the information ! Undefined control sequence. l.24742 underlying \code {getRversion()}). ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24743 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24745 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24746 \begin{ExampleCode} ! Missing $ inserted. $ l.24747 x <- package_ version(c("1.2-4", "1.2-3", "2.1")) ! Missing $ inserted. $ l.24753 ! You can't use `macro parameter character #' in horizontal mode. l.24754 if(getRversion() <= "2.5.0") { # # work around missing feature ! You can't use `macro parameter character #' in horizontal mode. l.24754 if(getRversion() <= "2.5.0") { ## work around missing feature ! Undefined control sequence. l.24756 ", is outdated.\n ", ! Undefined control sequence. l.24757 ... "Now trying to work around that ...\n ", sep = "") ! You can't use `macro parameter character #' in horizontal mode. l.24760 x[[c(1, 3)]] # '4' as a numeric vector, same as x[1, 3] ! You can't use `macro parameter character #' in horizontal mode. l.24761 x[1, 3] # 4 as an integer ! You can't use `macro parameter character #' in horizontal mode. l.24762 x[[2, 3]] <- 0 # zero the patchlevel ! You can't use `macro parameter character #' in horizontal mode. l.24763 x[[c(2, 3)]] <- 0 # same ! Missing $ inserted. $ l.24766 x <- c(x, package_ version("0.0")) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24770 \end{ExampleCode} ! Missing $ inserted. $ l.24770 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24771 \end{Examples} ! Undefined control sequence. l.24772 \HeaderA {octmode}{Display Numbers in Octal}{octmode} ! Undefined control sequence. l.24773 \aliasA {"!.octmode}{octmode}{!.octmode} ! Undefined control sequence. l.24774 \aliasA {\&.octmode}{octmode}{.Ramp..octmode} ! Undefined control sequence. l.24775 \aliasA {as.character.octmode}{octmode}{as.character.octmode} ! Undefined control sequence. l.24776 \aliasA {as.octmode}{octmode}{as.octmode} ! Undefined control sequence. l.24777 \aliasA {format.octmode}{octmode}{format.octmode} ! Undefined control sequence. l.24778 \aliasA {print.octmode}{octmode}{print.octmode} ! Undefined control sequence. l.24779 \aliasA {xor.octmode}{octmode}{xor.octmode} ! Undefined control sequence. l.24780 \aliasA {[.octmode}{octmode}{[.octmode} ! Undefined control sequence. l.24781 \aliasB {"|.octmode}{octmode}{|.octmode} ! Undefined control sequence. l.24782 \keyword {utilities}{octmode} ! Undefined control sequence. l.24783 \keyword {print}{octmode} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24785 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24788 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24790 \begin{Usage} Underfull \hbox (badness 1584) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 an in-te-ger x[[2, 3]] <- 0 zero the patch-level x[[c(2, 3)]] <- 0 same Underfull \hbox (badness 4303) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 x x[[3]] <- "2.2.3"; x x <- c(x, package$[]\OML/cmm/m/it/10 ers ion\OT1/cmr/m/n/10 ("0\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 0"))\OML/cmm/m/it/10 is :na\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )[4] \OML/cmm/m/it/10 < Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 TRUEstopifnot\OT1/cmr/m/n/10 (\OML/cmm/m/i t/10 identical\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 is:na\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; c\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 rep\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 FALSE; \OT1/cmr/m/n/10 3)\OML/cmm/m/it/10 ; TRUE\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 ; anyNA\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 x\OT1/cmr/m/n/10 ))$ Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 oct-modeDis-play Num-bers in Oc-taloct-mode "!.oct-mod- Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 eoct-mode!.octmode &.oct-mod-eoct-mode.Ramp..octmode Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 as.character.octmodeoctmodeas.character.octmode Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 as.octmodeoctmodeas.octmode for-mat.octmodeoctmodeformat.octmod e Underfull \hbox (badness 2828) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 print.octmodeoctmodeprint.octmode xor.octmodeoctmodexor.octmode [.oct- Underfull \hbox (badness 10000) in paragraph at lines 24760--24791 \OT1/cmr/m/n/10 mod-eoct-mode[.octmode "|.oct-mod-eoct-mode|.octmode util-i-tie soct-mode ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24803 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24805 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24806 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24807 \item[\code{x}] An object, for the methods inheriting from class \co... ! Undefined control sequence. l.24807 ...the methods inheriting from class \code {"octmode"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24808 \item[\code{width}] \code{NULL} or a positive integer specifying the... ! Undefined control sequence. l.24808 \item[\code{width}] \code {NULL} or a positive integer specifying the... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24810 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24811 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24812 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24814 \begin{Details} \relax ! Undefined control sequence. l.24815 Class \code {"octmode"} consists of integer vectors with that class ! Undefined control sequence. l.24818 \code {755}. Subsetting (\code{\LinkA{[}{[}}) works too. ! Undefined control sequence. l.24818 \code{755}. Subsetting (\code {\LinkA{[}{[}}) works too. ! Undefined control sequence. l.24818 \code{755}. Subsetting (\code{\LinkA {[}{[}}) works too. [240] ! Undefined control sequence. l.24820 If \code {width = NULL} (the default), the output is padded with ! Undefined control sequence. l.24824 \code {as.octmode} can convert integers (of \LinkA{type}{type} \code{... ! Undefined control sequence. l.24824 ...ctmode} can convert integers (of \LinkA {type}{type} \code{"intege... ! Undefined control sequence. l.24824 ...t integers (of \LinkA{type}{type} \code {"integer"} or ! Undefined control sequence. l.24825 \code {"double"}) and character vectors whose elements contain only ! Undefined control sequence. l.24826 digits \code {0-7} (or are \code{NA}) to class \code{"octmode"}. ! Undefined control sequence. l.24826 digits \code{0-7} (or are \code {NA}) to class \code{"octmode"}. ! Undefined control sequence. l.24826 ...{0-7} (or are \code{NA}) to class \code {"octmode"}. ! Undefined control sequence. l.24828 There is a \code {\LinkA{!}{!}} method and \code{\LinkA{|}{|}}, \code... ! Undefined control sequence. l.24828 There is a \code{\LinkA {!}{!}} method and \code{\LinkA{|}{|}}, \code... ! Undefined control sequence. l.24828 ... a \code{\LinkA{!}{!}} method and \code {\LinkA{|}{|}}, \code{\Lin... ! Undefined control sequence. l.24828 ...e{\LinkA{!}{!}} method and \code{\LinkA {|}{|}}, \code{\LinkA{\&}{... ! Undefined control sequence. l.24828 ...} method and \code{\LinkA{|}{|}}, \code {\LinkA{\&}{.Ramp.}} and ! Undefined control sequence. l.24828 ...d and \code{\LinkA{|}{|}}, \code{\LinkA {\&}{.Ramp.}} and ! Undefined control sequence. l.24829 \code {\LinkA{xor}{xor}} methods: these recycle their arguments to the ! Undefined control sequence. l.24829 \code{\LinkA {xor}{xor}} methods: these recycle their arguments to the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24832 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24834 \begin{SeeAlso} \relax ! Undefined control sequence. l.24835 These are auxiliary functions for \code {\LinkA{file.info}{file.info}}. ! Undefined control sequence. l.24835 ...re auxiliary functions for \code{\LinkA {file.info}{file.info}}. ! Undefined control sequence. l.24837 \code {\LinkA{hexmode}{hexmode}}, \code{\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.24837 \code{\LinkA {hexmode}{hexmode}}, \code{\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.24837 \code{\LinkA{hexmode}{hexmode}}, \code {\LinkA{sprintf}{sprintf}} for... ! Undefined control sequence. l.24837 ...\LinkA{hexmode}{hexmode}}, \code{\LinkA {sprintf}{sprintf}} for ot... ! Undefined control sequence. l.24838 converting integers to octal, \code {\LinkA{strtoi}{strtoi}} to conve... ! Undefined control sequence. l.24838 converting integers to octal, \code{\LinkA {strtoi}{strtoi}} to conve... ! LaTeX Error: \begin{document} ended by \end{SeeA page headings,lso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24840 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24842 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24843 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.24844 (on <- as.octmode(c(16, 32, 127:129))) # "020" "040" "177" "200" "201" ! You can't use `macro parameter character #' in horizontal mode. l.24845 unclass(on[3:4]) # subsetting ! You can't use `macro parameter character #' in vertical mode. l.24847 # # manipulate file modes ! You can't use `macro parameter character #' in vertical mode. l.24847 ## manipulate file modes ! Misplaced alignment tab character &. l.24849 (fmode | "644") & "755" ! You can't use `macro parameter character #' in horizontal mode. l.24851 umask <- Sys.umask(NA) # depends on platform ! Misplaced alignment tab character &. l.24852 c(fmode, "666", "755") & !umask ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24853 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24854 \end{Examples} ! Undefined control sequence. l.24855 \HeaderA {on.exit}{Function Exit Code}{on.exit} ! Undefined control sequence. l.24856 \keyword {programming}{on.exit} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24858 \begin{Description} \relax ! Undefined control sequence. l.24859 \code {on.exit} records the expression given as its argument as needing ! Undefined control sequence. l.24864 ...on is provided, i.e., the call is \code {on.exit()}, then ! Undefined control sequence. l.24865 the current \code {on.exit} code is removed. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24866 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24868 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2 tables, conditionals, indexing,4872 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24874 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24875 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24876 \item[\code{expr}] an expression to be executed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24877 \item[\code{add}] if TRUE, add \code{expr} to be executed after any ... ! Undefined control sequence. l.24877 \item[\code{add}] if TRUE, add \code {expr} to be executed after any ... ! Undefined control sequence. l.24878 ...ressions; otherwise (the default) \code {expr} will overwrite ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24880 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24881 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24883 \begin{Details} \relax ! Undefined control sequence. l.24884 The \code {expr} argument passed to \code{on.exit} is recorded without ! Undefined control sequence. l.24884 The \code{expr} argument passed to \code {on.exit} is recorded without ! Undefined control sequence. l.24886 \code {on.exit} call in the same function, it is evaluated in the ! Undefined control sequence. l.24890 ...: to capture the current value in \code {expr} use ! Undefined control sequence. l.24891 \code {\LinkA{substitute}{substitute}} or similar. ! Undefined control sequence. l.24891 \code{\LinkA {substitute}{substitute}} or similar. ! Undefined control sequence. l.24893 This is a `special' \LinkA {primitive}{primitive} function: it only ! Undefined control sequence. l.24894 evaluates the argument \code {add}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24895 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... sectioning, l.24897 \begin{Value} ! Undefined control sequence. l.24898 Invisible \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24899 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24901 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24905 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24907 \begin{SeeAlso} \relax ! Undefined control sequence. l.24908 \code {\LinkA{sys.on.exit}{sys.on.exit}} which returns the expression... ! Undefined control sequence. l.24908 \code{\LinkA {sys.on.exit}{sys.on.exit}} which returns the expression... ! Undefined control sequence. l.24909 by \code {on.exit()} in the function in which \code{sys.on.exit()} is ! Undefined control sequence. l.24909 ....exit()} in the function in which \code {sys.on.exit()} is ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24911 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24913 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24914 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24920 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24921 \end{Examples} ! Undefined control sequence. l.24922 \HeaderA {Ops.Date}{Operators on the Date Class}{Ops.Date} ! Undefined control sequence. l.24923 \aliasA {+.Date}{Ops.Date}{+.Date} ! Undefined control sequence. l.24924 \aliasA {-.Date}{Ops.Date}{.Rdash..Date} ! Undefined control sequence. l.24925 \keyword {utilities}{Ops.Date} ! Undefined control sequence. l.24926 \keyword {chron}{Ops.Date} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... toc, l.24928 \begin{Description} \relax ! Undefined control sequence. l.24929 Operators for the \code {"\LinkA{Date}{Date}"} class. ! Undefined control sequence. l.24929 Operators for the \code{"\LinkA {Date}{Date}"} class. Underfull \hbox (badness 1292) in paragraph at lines 24922--24930 \OT1/cmr/m/n/10 Ops.DateOperators on the Date Clas-sOps.Date +.Da-teOps.Date+.D ate - ! Undefined control sequence. l.24931 There is an \code {\LinkA{Ops}{S3groupGeneric}} method and specific ! Undefined control sequence. l.24931 There is an \code{\LinkA {Ops}{S3groupGeneric}} method and specific ! Undefined control sequence. l.24932 methods for \code {+} and \code{-} for the \code{\LinkA{Date}{Date}} ... ! Undefined control sequence. l.24932 methods for \code{+} and \code {-} for the \code{\LinkA{Date}{Date}} ... ! Undefined control sequence. l.24932 ...for \code{+} and \code{-} for the \code {\LinkA{Date}{Date}} class. ! Undefined control sequence. l.24932 ...de{+} and \code{-} for the \code{\LinkA {Date}{Date}} class. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24933 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24935 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24942 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24944 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24945 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24946 \item[\code{date}] date objects ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24947 \item[\code{date1, date2}] date objects or character vectors. (Char... ! Undefined control sequence. l.24948 vectors are converted by \code {\LinkA{as.Date}{as.Date}}.) ! Undefined control sequence. l.24948 vectors are converted by \code{\LinkA {as.Date}{as.Date}}.) [241 environments, defuns,] macros, cross references, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24949 \item[\code{x}] a numeric vector (in days) \emph{or} an object of class ! Undefined control sequence. l.24950 \code {"\LinkA{difftime}{difftime}"}, rounded to the nearest whole day. ! Undefined control sequence. l.24950 \code{"\LinkA {difftime}{difftime}"}, rounded to the nearest whole day. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24951 \item[\code{lop}] One of \code{==}, \code{!=}, \code{<}, \code{<=}, ... ! Undefined control sequence. l.24951 \item[\code{lop}] One of \code {==}, \code{!=}, \code{<}, \code{<=}, ... ! Undefined control sequence. l.24951 \item[\code{lop}] One of \code{==}, \code {!=}, \code{<}, \code{<=}, ... ! Undefined control sequence. l.24951 ...op}] One of \code{==}, \code{!=}, \code {<}, \code{<=}, \code{>} ! Undefined control sequence. l.24951 ...f \code{==}, \code{!=}, \code{<}, \code {<=}, \code{>} ! Undefined control sequence. l.24951 ..., \code{!=}, \code{<}, \code{<=}, \code {>} ! Undefined control sequence. l.24952 or \code {>=}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24953 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24954 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24956 \begin{Details} \relax ! Undefined control sequence. l.24957 \code {x} does not need to be integer if specified as a numeric vector, ! Undefined control sequence. l.24959 \code {\LinkA{Dates}{Dates}}. ! Undefined control sequence. l.24959 \code{\LinkA {Dates}{Dates}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24960 \end{Details} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24962 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24963 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... insertions, (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) l.24968 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24969 \end{Examples} ! Undefined control sequence. l.24970 \HeaderA {options}{Options Settings}{options} ! Undefined control sequence. l.24971 \aliasA {.Options}{options}{.Options} ! Undefined control sequence. l.24972 \aliasA {getOption}{options}{getOption} ! Undefined control sequence. l.24973 \aliasA {MC\_CORES}{options}{MC.Rul.CORES} ! Undefined control sequence. l.24974 \aliasA {option}{options}{option} ! Undefined control sequence. l.24975 \aliasA {R\_C\_BOUNDS\_CHECK}{options}{R.Rul.C.Rul.BOUNDS.Rul.CHECK} ! Undefined control sequence. l.24976 \aliasA {R\_DEFAULT\_DEVICE}{options}{R.Rul.DEFAULT.Rul.DEVICE} ! Undefined control sequence. l.24977 \aliasA {R\_INTERACTIVE\_DEVICE}{options}{R.Rul.INTERACTIVE.Rul.DEVICE} ! Undefined control sequence. l.24978 \aliasA {R\_KEEP\_PKG\_SOURCE}{options}{R.Rul.KEEP.Rul.PKG.Rul.SOURCE} ! Undefined control sequence. l.24979 \keyword {environment}{options} ! Undefined control sequence. l.24980 \keyword {error}{options} ! Undefined control sequence. l.24981 \keyword {print}{options} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24983 \begin{Description} \relax ! Undefined control sequence. l.24985 which affect the way in which \R {} computes and displays its results. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24986 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24988 \begin{Usage} Underfull \hbox (badness 4981) in paragraph at lines 24965--24989 \OT1/cmr/m/n/10 01") op-tion-sOp-tions Set-ting-sop-tions .Op-tion-sop-tions. Options getOp- Underfull \hbox (badness 6380) in paragraph at lines 24965--24989 \OT1/cmr/m/n/10 tionop-tion-sge-tOp-tion MC[]CORESoptionsMC.Rul.CORES op-tionop -tion-sop- Underfull \hbox (badness 10000) in paragraph at lines 24965--24989 \OT1/cmr/m/n/10 tion R[]C[]BOUNDS[]CHECKoptionsR.Rul.C.Rul.BOUNDS.Rul.CHECK Underfull \hbox (badness 10000) in paragraph at lines 24965--24989 \OT1/cmr/m/n/10 R[]DEFAULT[]DEVICEoptionsR.Rul.DEFAULT.Rul.DEVICE Underfull \hbox (badness 10000) in paragraph at lines 24965--24989 \OT1/cmr/m/n/10 R[]INTERACTIVE[]DEVICEoptionsR.Rul.INTERACTIVE.Rul.DEVICE ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24996 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24998 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX localization, manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24999 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25000 \item[\code{...}] any options can be defined, using \code{name = val... ! Undefined control sequence. l.25000 ...any options can be defined, using \code {name = value}. ! Undefined control sequence. l.25001 ...only the ones below are used in base \R {}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25006 \item[\code{x}] a character string holding an option name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25008 \item[\code{default}] if the specified option is not set in the opti... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25011 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25012 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25014 \begin{Details} \relax ! Undefined control sequence. l.25015 Invoking \code {options()} with no arguments returns a list with the ! Undefined control sequence. l.25018 use, e.g., \code {getOption("width")} rather than ! Undefined control sequence. l.25019 \code {options("width")} which is a \emph{list} of length one. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25020 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25022 \begin{Value} ! Undefined control sequence. l.25023 For \code {getOption}, the current value set for option \code{x}, or ! Undefined control sequence. l.25023 ... the current value set for option \code {x}, or ! Undefined control sequence. l.25024 \code {NULL} if the option is unset. ! Undefined control sequence. l.25026 For \code {options()}, a list of all set options sorted by name. For ! Undefined control sequence. l.25027 \code {options(name)}, a list of length one containing the set value, ! Undefined con formatting, and turning on texinfo input format.trol sequence. l.25028 or \code {NULL} if it is unset. For uses setting one or more options, ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25031 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25033 \begin{Section} {Options used in base \R{}} ! Undefined control sequence. l.25033 \begin{Section}{Options used in base \R {}} ! Undefined control sequence. \code {add.smooth}: l.25036 \item[\code{add.smooth}:] typically logical, defaulting to ! Undefined control sequence. l.25037 \code {TRUE}. Could also be set to an integer for specifying how ! Undefined control sequence. l.25039 used by \code {\LinkA{plot.lm}{plot.lm}}. ! Undefined control sequence. l.25039 used by \code{\LinkA {plot.lm}{plot.lm}}. ! Undefined control sequence. \code {browserNLdisabled}: l.25041 \item[\code{browserNLdisabled}:] logical: whether newline is ! Undefined control sequence. l.25042 disabled as a synonym for \code {"n"} in the browser. ! Undefined control sequence. \code {checkPackageLicense}: l.25044 \item[\code{checkPackageLicense}:] logical, not set by default. If ! Undefined control sequence. l.25045 true, \code {\LinkA{loadNamespace}{loadNamespace}} asks a user to acc... ! Undefined control sequence. l.25045 true, \code{\LinkA {loadNamespace}{loadNamespace}} asks a user to acc... ! Undefined control sequence. \code {check.bounds}: l.25049 \item[\code{check.bounds}:] logical, defaulting to \code{FALSE}. If ! Undefined control sequence. l.25049 ....bounds}:] logical, defaulting to \code {FALSE}. If ! Undefined control sequence. l.25050 true, a \LinkA {warning}{warning} is produced whenever a ! Undefined control sequence. l.25051 vector (atomic or \code {\LinkA{list}{list}}) is extended, by something ! Undefined control sequence. l.25051 vector (atomic or \code{\LinkA {list}{list}}) is extended, by something ! Undefined control sequence. l.25052 like \code {x <- 1:3; x[5] <- 6}. [242) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.aux] ! Undefined control sequence. \code {CBoundsCheck}: l.25054 \item[\code{CBoundsCheck}:] logical, controlling whether ! Undefined control sequence. l.25055 \code {\LinkA{.C}{.C}} and \code{\LinkA{.Fortran}{.Fortran}} make cop... ! Undefined control sequence. l.25055 \code{\LinkA {.C}{.C}} and \code{\LinkA{.Fortran}{.Fortran}} make cop... ! Undefined control sequence. l.25055 \code{\LinkA{.C}{.C}} and \code {\LinkA{.Fortran}{.Fortran}} make cop... ! Undefined control sequence. l.25055 \code{\LinkA{.C}{.C}} and \code{\LinkA {.Fortran}{.Fortran}} make cop... ! Undefined control sequence. l.25059 \env {R\_C\_BOUNDS\_CHECK} (set to \code{yes} to enable). ! Undefined control sequence. l.25059 \env{R\_C\_BOUNDS\_CHECK} (set to \code {yes} to enable). Underfull \hbox (badness 10000) in paragraph at lines 25058--25060 []\OT1/cmr/m/n/10 Initially set from value of the en-vi-ron-ment vari-able ! Undefined control sequence. \code {continue}: l.25061 \item[\code{continue}:] a non-empty string setting the prompt used ! Undefined control sequence. \code {defaultPackages}: l.25065 \item[\code{defaultPackages}:] the packages that are attached by ! Undefined control sequence. l.25066 default when \R {} starts up. Initially set from value of the ! Undefined control sequence. l.25067 environment variable \env {R\_DEFAULT\_PACKAGES}, or if that is unset ! Undefined control sequence. l.25068 to \code {c("datasets", "utils", "grDevices", "graphics", "stats", ! Undefined control sequence. l.25069 "methods")}. (Set \env {R\_DEFAULT\_PACKAGES} to \code{NULL} or ! Undefined control sequence. l.25069 ...Set \env{R\_DEFAULT\_PACKAGES} to \code {NULL} or ! Undefined control sequence. l.25071 this in a \file {.Rprofile} file, as its value is consulted before Underfull \hbox (badness 7685) in paragraph at lines 25065--25073 []\OT1/cmr/m/n/10 the pack-ages that are at-tached by de-fault when Underfull \hbox (badness 2088) in paragraph at lines 25065--25073 \OT1/cmr/m/n/10 starts up. Ini-tially set from value of the en-vi-ron-ment vari -able Underfull \hbox (badness 6792) in paragraph at lines 25065--25073 \OT1/cmr/m/n/10 R[]DEFAULT[]PACKAGES, or if that is un-set to c("datasets", Underfull \hbox (badness 10000) in paragraph at lines 25065--25073 \OT1/cmr/m/n/10 "utils", "grDe-vices", "graph-ics", "stats", "meth-ods"). (Set Underfull \hbox (badness 1931) in paragraph at lines 25065--25073 \OT1/cmr/m/n/10 R[]DEFAULT[]PACKAGES to NULL or a comma-separated list of ! Undefined control sequence. \code {deparse.cutoff}: l.25074 \item[\code{deparse.cutoff}:] integer value controlling the ! Undefined control sequence. l.25075 ... of language constructs which are \code {\LinkA{deparse}{deparse}}d. ! Undefined control sequence. l.25075 ...guage constructs which are \code{\LinkA {deparse}{deparse}}d. ! Undefined control sequence. l.25076 Default \code {60}. ! Undefined control sequence. \code {deparse.max.lines}: l.25079 \item[\code{deparse.max.lines}:] controls the number of lines used ! Undefined control sequence. l.25080 when deparsing in \code {\LinkA{traceback}{traceback}}, \code{\LinkA{... ! Undefined control sequence. l.25080 when deparsing in \code{\LinkA {traceback}{traceback}}, \code{\LinkA{... ! Undefined control sequence. l.25080 ...de{\LinkA{traceback}{traceback}}, \code {\LinkA{browser}{browser}}, ! Undefined control sequence. l.25080 ...kA{traceback}{traceback}}, \code{\LinkA {browser}{browser}}, ! Undefined control sequence. \code {digits}: l.25084 \item[\code{digits}:] controls the number of significant digits to ! Undefined control sequence. l.25087 \code {\LinkA{print.default}{print.default}} about values greater tha... ! Undefined control sequence. l.25087 \code{\LinkA {print.default}{print.default}} about values greater tha... ! Undefined control sequence. \code {digits.secs}: l.25089 \item[\code{digits.secs}:] controls the maximum number of digits to ! Undefined control sequence. l.25091 are 0\dots6 with default 0. See \code {\LinkA{strftime}{strftime}}. ! Undefined control sequence. l.25091 ...dots6 with default 0. See \code{\LinkA {strftime}{strftime}}. ! Undefined control sequence. \code {download.file.extra}: l.25093 \item[\code{download.file.extra}:] Extra command-line argument(s) for ! Undefined control sequence. l.25094 non-default methods: see \code {\LinkA{download.file}{download.file}}. ! Undefined control sequence. l.25094 non-default methods: see \code{\LinkA {download.file}{download.file}}. ! Undefined control sequence. \code {download.file.method}: l.25096 \item[\code{download.file.method}:] Method to be used for ! Undefined control sequence. l.25097 \code {download.file}. Currently download methods ! Undefined control sequence. l.25098 \code {"internal"}, \code{"wininet"} (Windows only), ! Undefined control sequence. l.25098 \code{"internal"}, \code {"wininet"} (Windows only), ! Undefined control sequence. l.25099 \code {"libcurl"}, \code{"wget"} and \code{"curl"} are available. ! Undefined control sequence. l.25099 \code{"libcurl"}, \code {"wget"} and \code{"curl"} are available. ! Undefined control sequence. l.25099 \code{"libcurl"}, \code{"wget"} and \code {"curl"} are available. ! Undefined control sequence. l.25100 If not set, \code {method = "auto"} ! Undefined control sequence. l.25101 is chosen: see \code {\LinkA{download.file}{download.file}}. ! Undefined control sequence. l.25101 is chosen: see \code{\LinkA {download.file}{download.file}}. ! Undefined control sequence. \code {echo}: l.25103 \item[\code{echo}:] logical. Only used in non-interactive mode, ! Undefined control sequence. l.25105 \option {--slave} sets this to \code{FALSE}, but otherwise ! Undefined control sequence. l.25105 \option{--slave} sets this to \code {FALSE}, but otherwise ! Undefined control sequence. l.25106 it starts the session as \code {TRUE}. ! Undefined control sequence. \code {encoding}: l.25108 \item[\code{encoding}:] The name of an encoding, default ! Undefined control sequence. l.25109 \code {"native.enc"}. See \code{\LinkA{connections}{connections}}. ! Undefined control sequence. l.25109 \code{"native.enc"}. See \code {\LinkA{connections}{connections}}. ! Undefined control sequence. l.25109 \code{"native.enc"}. See \code{\LinkA {connections}{connections}}. ! Undefined control sequence. \code {error}: l.25111 \item[\code{error}:] either a function or an expression governing ! Undefined control sequence. l.25113 \code {\LinkA{stop}{stop}} as well as by signals and internally detected ! Undefined control sequence. l.25113 \code{\LinkA {stop}{stop}} as well as by signals and internally detected ! Undefined control sequence. l.25116 value is \code {NULL}: see \code{\LinkA{stop}{stop}} for the behaviou... ! Undefined control sequence. l.25116 value is \code{NULL}: see \code {\LinkA{stop}{stop}} for the behaviou... ! Undefined control sequence. l.25116 value is \code{NULL}: see \code{\LinkA {stop}{stop}} for the behaviou... ! Undefined control sequence. l.25117 that case. The functions \code {\LinkA{dump.frames}{dump.frames}} and ! Undefined control sequence. l.25117 that case. The functions \code{\LinkA {dump.frames}{dump.frames}} and ! Undefined control sequence. l.25118 \code {\LinkA{recover}{recover}} provide alternatives that allow post... ! Undefined control sequence. l.25118 \code{\LinkA {recover}{recover}} provide alternatives that allow post... ! Undefined control sequence. l.25120 e.g.~\code {options(error = utils::recover)} in startup ! Undefined control sequence. l.25121 files such as \file {\LinkA{.Rprofile}{.Rprofile}}. ! Undefined control sequence. l.25121 files such as \file{\LinkA {.Rprofile}{.Rprofile}}. [243] ! Undefined control sequence. \code {expressions}: l.25123 \item[\code{expressions}:] sets a limit on the number of nested ! Undefined control sequence. l.25126 also want to start \R {} with a larger protection stack; ! Undefined control sequence. l.25127 see \option {--max-ppsize} in \code{\LinkA{Memory}{Memory}}. Note to... ! Undefined control sequence. l.25127 see \option{--max-ppsize} in \code {\LinkA{Memory}{Memory}}. Note to... ! Undefined control sequence. l.25127 see \option{--max-ppsize} in \code{\LinkA {Memory}{Memory}}. Note to... ! Undefined control sequence. l.25131 evaluation can be found by calling \code {\LinkA{Cstack\_info}{Cstack... ! Undefined control sequence. l.25131 ...on can be found by calling \code{\LinkA {Cstack\_info}{Cstack.Rul.... ! Undefined control sequence. \code {interrupt}: l.25133 \item[\code{interrupt}:] a function taking no arguments to be called ! Undefined control sequence. \code {keep.source}: l.25137 \item[\code{keep.source}:] When \code{TRUE}, the source code for ! Undefined control sequence. l.25137 \item[\code{keep.source}:] When \code {TRUE}, the source code for ! Undefined control sequence. l.25140 source by printing or using \code {deparse(fn, control = ! Undefined control sequence. l.25143 The default is \code {\LinkA{interactive}{interactive}()}, i.e., \cod... ! Undefined control sequence. l.25143 The default is \code{\LinkA {interactive}{interactive}()}, i.e., \cod... ! Undefined control sequence. l.25143 ...teractive}{interactive}()}, i.e., \code {TRUE} for ! Undefined control sequence. \code {keep.source.pkgs}: l.25147 \item[\code{keep.source.pkgs}:] As for \code{keep.source}, used only ! Undefined control sequence. l.25147 ...[\code{keep.source.pkgs}:] As for \code {keep.source}, used only ! Undefined control sequence. l.25148 ...kages are installed. Defaults to \code {FALSE} unless the ! Undefined control sequence. l.25149 environment variable \env {R\_KEEP\_PKG\_SOURCE} is set to \code{yes}. ! Undefined control sequence. l.25149 ...v{R\_KEEP\_PKG\_SOURCE} is set to \code {yes}. Underfull \hbox (badness 4205) in paragraph at lines 25147--25150 []\OT1/cmr/m/n/10 As for keep.source, used only when pack-ages are Underfull \hbox (badness 3884) in paragraph at lines 25147--25150 \OT1/cmr/m/n/10 in-stalled. De-faults to FALSE un-less the en-vi-ron-ment vari- able ! Undefined control sequence. \code {matprod}: l.25151 \item[\code{matprod}:] a string selecting the implementation of ! Undefined control sequence. l.25152 the matrix products \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.... ! Undefined control sequence. l.25152 the matrix products \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.... ! Undefined control sequence. l.25152 the matrix products \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.... ! Undefined control sequence. l.25152 ...ucts \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}}, \... ! Undefined control sequence. l.25152 ...\Rpercent{}}{.Rpcent.*.Rpcent.}}, \code {\LinkA{crossprod}{crosspr... ! Undefined control sequence. l.25152 ...nt{}}{.Rpcent.*.Rpcent.}}, \code{\LinkA {crossprod}{crossprod}}, and ! Undefined control sequence. l.25153 \code {\LinkA{tcrossprod}{tcrossprod}} for double and complex vectors: ! Undefined control sequence. l.25153 \code{\LinkA {tcrossprod}{tcrossprod}} for double and complex vectors: ! Undefined control sequence. \code {"internal"} l.25156 \item[\code{"internal"}] uses an unoptimized 3-loop algorithm ! Undefined control sequence. l.25157 which correctly propagates \code {\LinkA{NaN}{NaN}} and ! Undefined control sequence. l.25157 which correctly propagates \code{\LinkA {NaN}{NaN}} and ! Undefined control sequence. l.25158 \code {\LinkA{Inf}{Inf}} values and is consistent in precision with ! Undefined control sequence. l.25158 \code{\LinkA {Inf}{Inf}} values and is consistent in precision with ! Undefined control sequence. l.25159 other summation algorithms inside \R {} like \code{\LinkA{sum}{sum}} or ! Undefined control sequence. l.25159 ...ation algorithms inside \R{} like \code {\LinkA{sum}{sum}} or ! Undefined control sequence. l.25159 ...lgorithms inside \R{} like \code{\LinkA {sum}{sum}} or ! Undefined control sequence. l.25160 \code {\LinkA{colSums}{colSums}} (which now means that it uses a \cod... ! Undefined control sequence. l.25160 \code{\LinkA {colSums}{colSums}} (which now means that it uses a \cod... ! Undefined control sequence. l.25160 ...} (which now means that it uses a \code {long ! Undefined control sequence. l.25162 see \code {\LinkA{capabilities}{capabilities}}). ! Undefined control sequence. l.25162 see \code{\LinkA {capabilities}{capabilities}}). ! Undefined control sequence. \code {"default"} l.25163 \item[\code{"default"}] uses BLAS to speed up computation, but ! Undefined control sequence. l.25164 to ensure correct propagation of \code {NaN} and \code{Inf} ! Undefined control sequence. l.25164 ...ect propagation of \code{NaN} and \code {Inf} ! Undefined control sequence. l.25166 contain \code {NaN} or \code{Inf} values. When deemed ! Undefined control sequence. l.25166 contain \code{NaN} or \code {Inf} values. When deemed ! Undefined control sequence. l.25167 beneficial for performance, \code {"default"} may call the ! Undefined control sequence. l.25170 \code {double} accumulator for summation, which is consistent ! Undefined control sequence. \code {"blas"} l.25172 \item[\code{"blas"}] uses BLAS unconditionally without any ! Undefined control sequence. l.25174 libraries do not propagate \code {\LinkA{NaN}{NaN}} or ! Undefined control sequence. l.25174 libraries do not propagate \code{\LinkA {NaN}{NaN}} or ! Undefined control sequence. l.25175 \code {\LinkA{Inf}{Inf}} values correctly and for inputs with ! Undefined control sequence. l.25175 \code{\LinkA {Inf}{Inf}} values correctly and for inputs with ! Undefined control sequence. l.25176 \code {NaN}/\code{Inf} values the results may be undefined. ! Undefined control sequence. l.25176 \code{NaN}/\code {Inf} values the results may be undefined. ! Undefined control sequence. \code {"default.simd"} l.25177 \item[\code{"default.simd"}] is experimental and will likely be ! Undefined control sequence. l.25178 removed in future versions of \R {}. It provides the same behavior ! Undefined control sequence. l.25179 as \code {"default"}, but the check whether the input contains ! Undefined control sequence. l.25182 \code {"default"}. ! Undefined control sequence. \code {max.print}: l.25188 \item[\code{max.print}:] integer, defaulting to \code{99999}. ! Undefined control sequence. l.25188 ...x.print}:] integer, defaulting to \code {99999}. ! Undefined control sequence. l.25189 \code {\LinkA{print}{print}} or \code{\LinkA{show}{show}} methods can... ! Undefined control sequence. l.25189 \code{\LinkA {print}{print}} or \code{\LinkA{show}{show}} methods can... ! Undefined control sequence. l.25189 \code{\LinkA{print}{print}} or \code {\LinkA{show}{show}} methods can... ! Undefined control sequence. l.25189 ...e{\LinkA{print}{print}} or \code{\LinkA {show}{show}} methods can ... ! Undefined control sequence. l.25192 \code {max.print} \emph{entries}. [244] ! Undefined control sequence. \code {OutDec}: l.25194 \item[\code{OutDec}:] character string containing a single ! Undefined control sequence. l.25197 \code {\LinkA{format}{format}} and \code{\LinkA{as.character}{as.char... ! Undefined control sequence. l.25197 \code{\LinkA {format}{format}} and \code{\LinkA{as.character}{as.char... ! Undefined control sequence. l.25197 \code{\LinkA{format}{format}} and \code {\LinkA{as.character}{as.char... ! Undefined control sequence. l.25197 ...LinkA{format}{format}} and \code{\LinkA {as.character}{as.characte... ! Undefined control sequence. l.25198 deparsing nor by \code {\LinkA{sprintf}{sprintf}} nor \code{\LinkA{fo... ! Undefined control sequence. l.25198 deparsing nor by \code{\LinkA {sprintf}{sprintf}} nor \code{\LinkA{fo... ! Undefined control sequence. l.25198 ...ode{\LinkA{sprintf}{sprintf}} nor \code {\LinkA{formatC}{formatC}} ! Undefined control sequence. l.25198 ...nkA{sprintf}{sprintf}} nor \code{\LinkA {formatC}{formatC}} ! Undefined control sequence. \code {pager}: l.25202 \item[\code{pager}:] the command used for displaying text files by ! Undefined control sequence. l.25203 \code {\LinkA{file.show}{file.show}}. ! Undefined control sequence. l.25203 \code{\LinkA {file.show}{file.show}}. ! Undefined control sequence. l.25204 Defaults to \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/bin/pager}, whic... ! Undefined control sequence. l.25204 Defaults to \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/bin/pager}, whic... ! Undefined control sequence. l.25204 Defaults to \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/bin/pager}, whic... ! Undefined control sequence. l.25206 variable \env {PAGER} whose default is set at configuration, ! Undefined control sequence. l.25207 usually to \command {less}. ! Undefined control sequence. l.25208 Can be a character string or an \R {} function, in which case it ! Undefined control sequence. l.25209 needs to accept the arguments \code {(files, header, ! Undefined control sequence. l.25211 \code {\LinkA{file.show}{file.show}}. ! Undefined control sequence. l.25211 \code{\LinkA {file.show}{file.show}}. ! Undefined control sequence. \code {papersize}: l.25213 \item[\code{papersize}:] the default paper format used by ! Undefined control sequence. l.25214 \code {\LinkA{postscript}{postscript}}; set by environment variable ! Undefined control sequence. l.25214 \code{\LinkA {postscript}{postscript}}; set by environment variable ! Undefined control sequence. l.25215 \env {R\_PAPERSIZE} when \R{} is started: if that is unset or invalid ! Undefined control sequence. l.25215 \env{R\_PAPERSIZE} when \R {} is started: if that is unset or invalid ! Undefined control sequence. l.25217 ... derived from the locale category \code {LC\_PAPER}, or ! Undefined control sequence. l.25218 ...is unavailable to a default set when \R {} was built. ! Undefined control sequence. \code {PCRE\_limit\_recursion}: l.25221 \item[\code{PCRE\_limit\_recursion}:] Logical: should ! Undefined control sequence. l.25222 \code {\LinkA{grep}{grep}(perl = TRUE)} and similar limit the maximal ! Undefined control sequence. l.25222 \code{\LinkA {grep}{grep}(perl = TRUE)} and similar limit the maximal ! Undefined control sequence. l.25224 recursion stack (see \code {\LinkA{pcre\_config}{pcre.Rul.config}}, b... ! Undefined control sequence. l.25224 recursion stack (see \code{\LinkA {pcre\_config}{pcre.Rul.config}}, b... ! Undefined control sequence. l.25227 \url {http://www.pcre.org/original/doc/html/pcrestack.html}. If ! Undefined control sequence. l.25228 true, the limit is reduced using \R {}'s estimate of the C stack size ! Undefined control sequence. l.25229 ... (if known), otherwise 10000. If \code {NA}, the limit is Underfull \hbox (badness 2875) in paragraph at lines 25221--25231 \OT1/cmr/m/n/10 but it is by de-fault with a re-cur-sion limit of 10000000 whic h Underfull \hbox (badness 3240) in paragraph at lines 25221--25231 \OT1/cmr/m/n/10 po-ten-tially needs a very large C stack: see the dis-cus-sion at ! Undefined control sequence. \code {PCRE\_study}: l.25232 \item[\code{PCRE\_study}:] Logical or integer: should ! Undefined control sequence. l.25233 \code {\LinkA{grep}{grep}(perl = TRUE)} and similar `study' the ! Undefined control sequence. l.25233 \code{\LinkA {grep}{grep}(perl = TRUE)} and similar `study' the ! Undefined control sequence. l.25236 default is \code {10})). Missing values and negative numbers are ! Undefined control sequence. \code {PCRE\_use\_JIT}: l.25239 \item[\code{PCRE\_use\_JIT}:] Logical: should \code{\LinkA{grep}{gre... ! Undefined control sequence. l.25239 ...PCRE\_use\_JIT}:] Logical: should \code {\LinkA{grep}{grep}(perl = ! Undefined control sequence. l.25239 ...se\_JIT}:] Logical: should \code{\LinkA {grep}{grep}(perl = ! Undefined control sequence. l.25240 TRUE)}, \code {\LinkA{strsplit}{strsplit}(perl = TRUE)} and similar ... ! Undefined control sequence. l.25240 TRUE)}, \code{\LinkA {strsplit}{strsplit}(perl = TRUE)} and similar ... ! Undefined control sequence. \code {pdfviewer}: l.25244 \item[\code{pdfviewer}:] default PDF viewer. ! Undefined control sequence. l.25245 ... set from the environment variable \env {R\_PDFVIEWER}, ! Undefined control sequence. l.25246 the default value of which is set when \R {} is configured. ! Undefined control sequence. \code {printcmd}: l.25249 \item[\code{printcmd}:] the command used by \code{\LinkA{postscript}... ! Undefined control sequence. l.25249 ...e{printcmd}:] the command used by \code {\LinkA{postscript}{postsc... ! Undefined control sequence. l.25249 ...cmd}:] the command used by \code{\LinkA {postscript}{postscript}} ! Undefined control sequence. l.25250 ...nting; set by environment variable \env {R\_PRINTCMD} when ! Undefined control sequence. l.25251 \R {} is started. This should be a command that expects either input ! Undefined control sequence. l.25252 to be piped to \file {stdin} or to be given a single filename ! Undefined control sequence. l.25253 argument. Usually set to \code {"lpr"} on a Unix-alike. ! Undefined control sequence. \code {prompt}: l.25255 \item[\code{prompt}:] a non-empty string to be used for \R{}'s prompt; ! Undefined control sequence. l.25255 ...:] a non-empty string to be used for \R {}'s prompt; ! Undefined control sequence. l.25256 should usually end in a blank (\code {" "}). [245] ! Undefined control sequence. \code {rl\_word\_breaks}: l.25259 \item[\code{rl\_word\_breaks}:] Used for the readline-based terminal ! Undefined control sequence. l.25260 interface. Default value \code {" \bsl{}t\bsl{}n\bsl{}"\bsl{}\bsl{}'... ! Undefined control sequence. l.25260 interface. Default value \code{" \bsl {}t\bsl{}n\bsl{}"\bsl{}\bsl{}'... ! Undefined control sequence. l.25260 ...ace. Default value \code{" \bsl{}t\bsl {}n\bsl{}"\bsl{}\bsl{}'`><... ! Undefined control sequence. l.25260 ...efault value \code{" \bsl{}t\bsl{}n\bsl {}"\bsl{}\bsl{}'`><=\%;,|\... ! Undefined control sequence. l.25260 ...value \code{" \bsl{}t\bsl{}n\bsl{}"\bsl {}\bsl{}'`><=\%;,|\&\{()\}"}. ! Undefined control sequence. l.25260 ...\code{" \bsl{}t\bsl{}n\bsl{}"\bsl{}\bsl {}'`><=\%;,|\&\{()\}"}. ! Undefined control sequence. l.25265 \code {" \bsl{}t\bsl{}n\bsl{}"\bsl{}\bsl{}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. l.25265 \code{" \bsl {}t\bsl{}n\bsl{}"\bsl{}\bsl{}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. l.25265 \code{" \bsl{}t\bsl {}n\bsl{}"\bsl{}\bsl{}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. l.25265 \code{" \bsl{}t\bsl{}n\bsl {}"\bsl{}\bsl{}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. l.25265 \code{" \bsl{}t\bsl{}n\bsl{}"\bsl {}\bsl{}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. l.25265 \code{" \bsl{}t\bsl{}n\bsl{}"\bsl{}\bsl {}'`><=+-*\%;,|\&\{()\}"} ! Undefined control sequence. \code {save.defaults}, \code {save.image.defaults}: l.25268 ...defaults}, \code{save.image.defaults}:] ! Undefined control sequence. \code {save.defaults}, \code {save.image.defaults}: l.25268 ...defaults}, \code{save.image.defaults}:] ! Undefined control sequence. l.25269 see \code {\LinkA{save}{save}}. ! Undefined control sequence. l.25269 see \code{\LinkA {save}{save}}. ! Undefined control sequence. \code {scipen}: l.25271 \item[\code{scipen}:] integer. A penalty to be applied ! Undefined control sequence. l.25275 more than \code {scipen} digits wider. ! Undefined control sequence. \code {showWarnCalls}, \code {showErrorCalls}: l.25277 ...showWarnCalls}, \code{showErrorCalls}:] a logical. ! Undefined control sequence. \code {showWarnCalls}, \code {showErrorCalls}: l.25277 ...showWarnCalls}, \code{showErrorCalls}:] a logical. ! Undefined control sequence. \code {showNCalls}: l.25282 \item[\code{showNCalls}:] integer. Controls how long the sequence ! Undefined control sequence. \code {show.error.locations}: l.25286 \item[\code{show.error.locations}:] Should source locations of ! Undefined control sequence. l.25287 errors be printed? If set to \code {TRUE} or \code{"top"}, the ! Undefined control sequence. l.25287 ...rinted? If set to \code{TRUE} or \code {"top"}, the ! Undefined control sequence. l.25289 call) will be printed. \code {"bottom"} will print the location ! Undefined control sequence. l.25292 ... select other entries. The value \code {0} ! Undefined control sequence. l.25293 corresponds to \code {"top"} and positive values count down the ! Undefined control sequence. l.25294 stack from there. The value \code {-1} corresponds to ! Undefined control sequence. l.25295 \code {"bottom"} and negative values count up from there. ! Undefined control sequence. \code {show.error.messages}: l.25298 \item[\code{show.error.messages}:] a logical. Should error messages ! Undefined control sequence. l.25299 be printed? Intended for use with \code {\LinkA{try}{try}} or a ! Undefined control sequence. l.25299 ...ed? Intended for use with \code{\LinkA {try}{try}} or a ! Undefined control sequence. \code {stringsAsFactors}: l.25302 \item[\code{stringsAsFactors}:] The default setting for arguments of ! Undefined control sequence. l.25303 \code {\LinkA{data.frame}{data.frame}} and \code{\LinkA{read.table}{r... ! Undefined control sequence. l.25303 \code{\LinkA {data.frame}{data.frame}} and \code{\LinkA{read.table}{r... ! Undefined control sequence. l.25303 ...inkA{data.frame}{data.frame}} and \code {\LinkA{read.table}{read.t... ! Undefined control sequence. l.25303 ...ta.frame}{data.frame}} and \code{\LinkA {read.table}{read.table}}. ! Undefined control sequence. \code {texi2dvi}: l.25305 \item[\code{texi2dvi}:] used by functions ! Undefined control sequence. l.25306 \code {\LinkA{texi2dvi}{texi2dvi}} and \code{\LinkA{texi2pdf}{texi2pd... ! Undefined control sequence. l.25306 \code{\LinkA {texi2dvi}{texi2dvi}} and \code{\LinkA{texi2pdf}{texi2pd... ! Undefined control sequence. l.25306 ...e{\LinkA{texi2dvi}{texi2dvi}} and \code {\LinkA{texi2pdf}{texi2pdf... ! Undefined control sequence. l.25306 ...A{texi2dvi}{texi2dvi}} and \code{\LinkA {texi2pdf}{texi2pdf}} in p... ! Undefined control sequence. l.25306 ...kA{texi2pdf}{texi2pdf}} in package \pkg {tools}. ! Undefined control sequence. l.25307 ...rtup from the environment variable \env {R\_TEXI2DVICMD}, ! Undefined control sequence. l.25309 \env {TEXI2DVI}, and then to a value set when \R{} was installed (the ! Undefined control sequence. l.25309 ...I2DVI}, and then to a value set when \R {} was installed (the ! Undefined control sequence. l.25310 full path to a \command {texi2dvi} script if one was found). If ! Undefined control sequence. l.25311 ...nvironment variable can be set to \code {"emulation"}. ! Undefined control sequence. \code {timeout}: l.25314 \item[\code{timeout}:] integer. The timeout for some Internet ! Undefined control sequence. l.25316 \code {\LinkA{download.file}{download.file}} and \code{\LinkA{connect... ! Undefined control sequence. l.25316 \code{\LinkA {download.file}{download.file}} and \code{\LinkA{connect... ! Undefined control sequence. l.25316 ...ownload.file}{download.file}} and \code {\LinkA{connections}{conne... ! Undefined control sequence. l.25316 ....file}{download.file}} and \code{\LinkA {connections}{connections}}. ! Undefined control sequence. \code {topLevelEnvironment}: l.25318 \item[\code{topLevelEnvironment}:] see \code{\LinkA{topenv}{topenv}}... ! Undefined control sequence. l.25318 ...[\code{topLevelEnvironment}:] see \code {\LinkA{topenv}{topenv}} and ! Undefined control sequence. l.25318 ...topLevelEnvironment}:] see \code{\LinkA {topenv}{topenv}} and ! Undefined control sequence. l.25319 \code {\LinkA{sys.source}{sys.source}}. ! Undefined control sequence. l.25319 \code{\LinkA {sys.source}{sys.source}}. ! Undefined control sequence. \code {url.method}: l.25321 \item[\code{url.method}:] character string: the default method for ! Undefined control sequence. l.25322 \code {\LinkA{url}{url}}. Normally unset, which is equivalent to ! Undefined control sequence. l.25322 \code{\LinkA {url}{url}}. Normally unset, which is equivalent to ! Undefined control sequence. l.25323 \code {"default"}, which is \code{"internal"} except on Windows. ! Undefined control sequence. l.25323 \code{"default"}, which is \code {"internal"} except on Windows. ! Undefined control sequence. \code {useFancyQuotes}: l.25325 \item[\code{useFancyQuotes}:] controls the use of ! Undefined control sequence. l.25326 directional quotes in \code {\LinkA{sQuote}{sQuote}}, \code{dQuote} a... ! Undefined control sequence. l.25326 directional quotes in \code{\LinkA {sQuote}{sQuote}}, \code{dQuote} a... ! Undefined control sequence. l.25326 ...in \code{\LinkA{sQuote}{sQuote}}, \code {dQuote} and in ! Undefined control sequence. l.25327 rendering text help (see \code {\LinkA{Rd2txt}{Rd2txt}} in package ! Undefined control sequence. l.25327 rendering text help (see \code{\LinkA {Rd2txt}{Rd2txt}} in package ! Undefined control sequence. l.25328 \pkg {tools}). Can be \code{TRUE}, \code{FALSE}, \code{"TeX"} or ! Undefined control sequence. l.25328 \pkg{tools}). Can be \code {TRUE}, \code{FALSE}, \code{"TeX"} or ! Undefined control sequence. l.25328 \pkg{tools}). Can be \code{TRUE}, \code {FALSE}, \code{"TeX"} or ! Undefined control sequence. l.25328 ...Can be \code{TRUE}, \code{FALSE}, \code {"TeX"} or ! Undefined control sequence. l.25329 \code {"UTF-8"}. [246] ! Undefined control sequence. \code {verbose}: l.25331 \item[\code{verbose}:] logical. Should \R{} report extra information ! Undefined control sequence. l.25331 \item[\code{verbose}:] logical. Should \R {} report extra information ! Undefined control sequence. l.25332 on progress? Set to \code {TRUE} by the command-line option ! Undefined control sequence. l.25333 \option {--verbose}. ! Undefined control sequence. \code {warn}: l.25335 \item[\code{warn}:] sets the handling of warning messages. If ! Undefined control sequence. l.25336 \code {warn} is negative all warnings are ignored. If \code{warn} ! Undefined control sequence. l.25336 ...ive all warnings are ignored. If \code {warn} ! Undefined control sequence. l.25340 signalled. An object called \code {last.warning} is ! Undefined control sequence. l.25342 \code {\LinkA{warnings}{warnings}}. If \code{warn} is one, warnings are ! Undefined control sequence. l.25342 \code{\LinkA {warnings}{warnings}}. If \code{warn} is one, warnings are ! Undefined control sequence. l.25342 ...{\LinkA{warnings}{warnings}}. If \code {warn} is one, warnings are ! Undefined control sequence. l.25343 printed as they occur. If \code {warn} is two or larger all ! Undefined control sequence. \code {warnPartialMatchArgs}: l.25346 \item[\code{warnPartialMatchArgs}:] logical. If true, warns if ! Undefined control sequence. \code {warnPartialMatchAttr}: l.25349 \item[\code{warnPartialMatchAttr}:] logical. If true, warns if ! Undefined control sequence. l.25351 \code {\LinkA{attr}{attr}}. ! Undefined control sequence. l.25351 \code{\LinkA {attr}{attr}}. ! Undefined control sequence. \code {warnPartialMatchDollar}: l.25353 \item[\code{warnPartialMatchDollar}:] logical. If true, warns if ! Undefined control sequence. l.25354 ...atching is used for extraction by \code {\$}. ! Undefined control sequence. \code {warning.expression}: l.25356 \item[\code{warning.expression}:] an \R{} code expression to be called ! Undefined control sequence. l.25356 \item[\code{warning.expression}:] an \R {} code expression to be called ! Undefined control sequence. l.25359 \code {warn}. ! Undefined control sequence. \code {warning.length}: l.25361 \item[\code{warning.length}:] sets the truncation limit for error ! Undefined control sequence. \code {nwarnings}: l.25365 \item[\code{nwarnings}:] the limit for the number of warnings kept ! Undefined control sequence. l.25366 when \code {warn = 0}, default 50. This will discard messages if ! Undefined control sequence. \code {width}: l.25372 \item[\code{width}:] controls the maximum number of columns on a ! Undefined control sequence. l.25374 filling by \code {\LinkA{cat}{cat}}. ! Undefined control sequence. l.25374 filling by \code{\LinkA {cat}{cat}}. ! Undefined control sequence. l.25379 ... this if you re-size the window that \R {} is ! Undefined control sequence. l.25381 ...imits on valid values are in file \file {Print.h} and can be ! Undefined control sequence. l.25382 changed by re-compiling \R {}.) Some \R{} consoles automatically change ! Undefined control sequence. l.25382 changed by re-compiling \R{}.) Some \R {} consoles automatically change ! Undefined control sequence. l.25385 See the examples on \LinkA {Startup}{Startup} for one way to set this ! Undefined control sequence. l.25386 ...tically from the terminal width when \R {} is started. ! Undefined control sequence. l.25394 \Tabular {ll}{ ! Undefined control sequence. l.25395 \code {add.smooth} & \code{TRUE}\\{} ! Misplaced alignment tab character &. l.25395 \code{add.smooth} & \code{TRUE}\\{} ! Undefined control sequence. l.25395 \code{add.smooth} & \code {TRUE}\\{} ! Undefined control sequence. l.25396 \code {check.bounds} & \code{FALSE}\\{} ! Misplaced alignment tab character &. l.25396 \code{check.bounds} & \code{FALSE}\\{} ! Undefined control sequence. l.25396 \code{check.bounds} & \code {FALSE}\\{} ! Undefined control sequence. l.25397 \code {continue} & \code{"+ "}\\{} ! Misplaced alignment tab character &. l.25397 \code{continue} & \code{"+ "}\\{} ! Undefined control sequence. l.25397 \code{continue} & \code {"+ "}\\{} ! Undefined control sequence. l.25398 \code {digits} & \code{7}\\{} ! Misplaced alignment tab character &. l.25398 \code{digits} & \code{7}\\{} ! Undefined control sequence. l.25398 \code{digits} & \code {7}\\{} ! Undefined control sequence. l.25399 \code {echo} & \code{TRUE}\\{} ! Misplaced alignment tab character &. l.25399 \code{echo} & \code{TRUE}\\{} ! Undefined control sequence. l.25399 \code{echo} & \code {TRUE}\\{} ! Undefined control sequence. l.25400 \code {encoding} & \code{"native.enc"}\\{} ! Misplaced alignment tab character &. l.25400 \code{encoding} & \code{"native.enc"}\\{} ! Undefined control sequence. l.25400 \code{encoding} & \code {"native.enc"}\\{} ! Undefined control sequence. l.25401 \code {error} & \code{NULL}\\{} ! Misplaced alignment tab character &. l.25401 \code{error} & \code{NULL}\\{} ! Undefined control sequence. l.25401 \code{error} & \code {NULL}\\{} ! Undefined control sequence. l.25402 \code {expressions} & \code{5000}\\{} ! Misplaced alignment tab character &. l.25402 \code{expressions} & \code{5000}\\{} ! Undefined control sequence. l.25402 \code{expressions} & \code {5000}\\{} ! Undefined control sequence. l.25403 \code {keep.source} & \code{interactive()}\\{} ! Misplaced alignment tab character &. l.25403 \code{keep.source} & \code{interactive()}\\{} ! Undefined control sequence. l.25403 \code{keep.source} & \code {interactive()}\\{} ! Undefined control sequence. l.25404 \code {keep.source.pkgs} & \code{FALSE}\\{} ! Misplaced alignment tab character &. l.25404 \code{keep.source.pkgs} & \code{FALSE}\\{} ! Undefined control sequence. l.25404 \code{keep.source.pkgs} & \code {FALSE}\\{} ! Undefined control sequence. l.25405 \code {max.print} & \code{99999}\\{} ! Misplaced alignment tab character &. l.25405 \code{max.print} & \code{99999}\\{} ! Undefined control sequence. l.25405 \code{max.print} & \code ) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex {99999}\\{} ! Undefined control sequence. l.25406 \code {OutDec} & \code{"."}\\{} ! Misplaced alignment tab character &. l.25406 \code{OutDec} & \code{"."}\\{} ! Undefined control sequence. l.25406 \code{OutDec} & \code {"."}\\{} ! Undefined control sequence. l.25407 \code {prompt} & \code{"> "}\\{} ! Misplaced alignment tab character &. l.25407 \code{prompt} & \code{"> "}\\{} ! Undefined control sequence. l.25407 \code{prompt} & \code {"> "}\\{} ! Undefined control sequence. l.25408 \code {scipen} & \code{0} \\{} ! Misplaced alignment tab character &. l.25408 \code{scipen} & \code{0} \\{} ! Undefined control sequence. l.25408 \code{scipen} & \code {0} \\{} ! Undefined control sequence. l.25409 \code {show.error.messages} & \code{TRUE}\\{} ! Misplaced alignment tab character &. l.25409 \code{show.error.messages} & \code{TRUE}\\{} ! Undefined control sequence. l.25409 \code{show.error.messages} & \code {TRUE}\\{} ! Undefined control sequence. l.25410 \code {timeout} & \code{60}\\{} ! Misplaced alignment tab character &. l.25410 \code{timeout} & \code{60}\\{} ! Undefined control sequence. l.25410 \code{timeout} & \code {60}\\{} ! Undefined control sequence. l.25411 \code {verbose} & \code{FALSE}\\{} ! Misplaced alignment tab character &. l.25411 \code{verbose} & \code{FALSE}\\{} ! Undefined control sequence. l.25411 \code{verbose} & \code {FALSE}\\{} ! Undefined control sequence. l.25412 \code {warn} & \code{0}\\{} ! Misplaced alignment tab character &. l.25412 \code{warn} & \code{0}\\{} ! Undefined control sequence. l.25412 \code{warn} & \code {0}\\{} ! Undefined control sequence. l.25413 \code {warning.length} & \code{1000}\\{} ! Misplaced alignment tab character &. l.25413 \code{warning.length} & \code{1000}\\{} ! Undefined control sequence. l.25413 \code{warning.length} & \code {1000}\\{} ! Undefined control sequence. l.25414 \code {width} & \code{80}\\{} ! Misplaced alignment tab character &. l.25414 \code{width} & \code{80}\\{} ! Undefined control sequence. l.25414 \code{width} & \code {80}\\{} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25417 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25419 \begin{Section} {Options set in package grDevices} ! Undefined control sequence. l.25420 These will be set when package \pkg {grDevices} (or its namespace) [247)] ! Undefined control sequence. \code {bitmapType}: l.25424 \item[\code{bitmapType}:] (Unix-only) character. The default type f... ! Undefined control sequence. l.25425 bitmap devices such as \code {\LinkA{png}{png}}. Defaults to ! Undefined control sequence. l.25425 bitmap devices such as \code{\LinkA {png}{png}}. Defaults to ! Undefined control sequence. l.25426 \code {"cairo"} on systems where that is available, or to ! Undefined control sequence. l.25427 \code {"quartz"} on macOS where that is available. ! Undefined control sequence. \code {device}: l.25429 \item[\code{device}:] a character string giving ! Undefined control sequence. l.25433 normal screen device (e.g., \code {X11}, \code{windows} or ! Undefined control sequence. l.25433 ... screen device (e.g., \code{X11}, \code {windows} or ! Undefined control sequence. l.25434 \code {quartz}) for an interactive session, and \code{pdf} ! Undefined control sequence. l.25434 ...) for an interactive session, and \code {pdf} ! Undefined control sequence. l.25438 \pkg {grDevices} namespace. ! Undefined control sequence. l.25442 \env {R\_INTERACTIVE\_DEVICE} and \env{R\_DEFAULT\_DEVICE} ! Undefined control sequence. l.25442 \env{R\_INTERACTIVE\_DEVICE} and \env {R\_DEFAULT\_DEVICE} ! Undefined control sequence. l.25446 this is \code {windows} on Windows, and \code{quartz} if available ! Undefined control sequence. l.25446 ...is \code{windows} on Windows, and \code {quartz} if available ! Undefined control sequence. l.25448 Otherwise \code {X11} is used if environment variable \env{DISPLAY} ! Undefined control sequence. l.25448 ...1} is used if environment variable \env {DISPLAY} ! Undefined control sequence. \code {device.ask.default}: l.25452 \item[\code{device.ask.default}:] logical. The default for ! Undefined control sequence. l.25453 \code {\LinkA{devAskNewPage}{devAskNewPage}("ask")} when a device is ... ! Undefined control sequence. l.25453 \code{\LinkA {devAskNewPage}{devAskNewPage}("ask")} when a device is ... ! Undefined control sequence. \code {locatorBell}: l.25455 \item[\code{locatorBell}:] logical. Should selection in \code{locator} ! Undefined control sequence. l.25455 ...}:] logical. Should selection in \code {locator} ! Undefined control sequence. l.25456 and \code {identify} be confirmed by a bell? Default \code{TRUE}. ! Undefined control sequence. l.25456 ... be confirmed by a bell? Default \code {TRUE}. ! Undefined control sequence. l.25457 Honoured at least on \code {X11} and \code{windows} devices. ! Undefined control sequence. l.25457 Honoured at least on \code{X11} and \code {windows} devices. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25462 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ) l.25464 \begin{Section} {Other options used by package graphics} ! Undefined control sequence. \code {max.contour.segments}: l.25467 \item[\code{max.contour.segments}:] positive integer, defaulting to ! Undefined control sequence. l.25468 \code {25000} if not set. A limit on the number of ! Undefined control sequence. l.25469 segments in a single contour line in \code {\LinkA{contour}{contour}} or ! Undefined control sequence. l.25469 ...n a single contour line in \code{\LinkA {contour}{contour}} or ! Undefined control sequence. l.25470 \code {\LinkA{contourLines}{contourLines}}. ! Undefined control sequence. l.25470 \code{\LinkA {contourLines}{contourLines}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25474 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25476 \begin{Section} {Options set in package stats} ! Undefined control sequence. l.25477 These will be set when package \pkg {stats} (or its namespace) [248 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map] ! Undefined control sequence. \code {contrasts}: l.25481 \item[\code{contrasts}:] the default \code{\LinkA{contrasts}{contras... ! Undefined control sequence. l.25481 \item[\code{contrasts}:] the default \code {\LinkA{contrasts}{contras... ! Undefined control sequence. l.25481 ...e{contrasts}:] the default \code{\LinkA {contrasts}{contrasts}} us... ! Undefined control sequence. l.25482 model fitting such as with \code {\LinkA{aov}{aov}} or \code{\LinkA{l... ! Undefined control sequence. l.25482 model fitting such as with \code{\LinkA {aov}{aov}} or \code{\LinkA{l... ! Undefined control sequence. l.25482 ...s with \code{\LinkA{aov}{aov}} or \code {\LinkA{lm}{lm}}. ! Undefined control sequence. l.25482 ...\code{\LinkA{aov}{aov}} or \code{\LinkA {lm}{lm}}. ! Undefined control sequence. l.25486 \code {c("unordered", "ordered")}, but the names are unused. ! Undefined control sequence. \code {na.action}: l.25488 \item[\code{na.action}:] the name of a function for treating missing ! Undefined control sequence. l.25489 values (\code {\LinkA{NA}{NA}}'s) for certain situations, see ! Undefined control sequence. l.25489 values (\code{\LinkA {NA}{NA}}'s) for certain situations, see ! Undefined control sequence. l.25490 \code {\LinkA{na.action}{na.action}} and \code{\LinkA{na.pass}{na.pas... ! Undefined control sequence. l.25490 \code{\LinkA {na.action}{na.action}} and \code{\LinkA{na.pass}{na.pas... ! Undefined control sequence. l.25490 ...\LinkA{na.action}{na.action}} and \code {\LinkA{na.pass}{na.pass}}. ! Undefined control sequence. l.25490 ...na.action}{na.action}} and \code{\LinkA {na.pass}{na.pass}}. ! Undefined control sequence. \code {show.coef.Pvalues}: l.25492 \item[\code{show.coef.Pvalues}:] logical, affecting whether P ! Undefined control sequence. l.25494 \code {\LinkA{printCoefmat}{printCoefmat}}. ! Undefined control sequence. l.25494 \code{\LinkA {printCoefmat}{printCoefmat}}. ! Undefined control sequence. \code {show.nls.convergence}: l.25496 \item[\code{show.nls.convergence}:] logical, should \code{\LinkA{nls... ! Undefined control sequence. l.25496 ...ls.convergence}:] logical, should \code {\LinkA{nls}{nls}} ! Undefined control sequence. l.25496 ...ergence}:] logical, should \code{\LinkA {nls}{nls}} ! Undefined control sequence. \code {show.signif.stars}: l.25499 \item[\code{show.signif.stars}:] logical, should stars be printed on ! Undefined control sequence. l.25500 summary tables of coefficients? See \code {\LinkA{printCoefmat}{prin... ! Undefined control sequence. l.25500 ...bles of coefficients? See \code{\LinkA {printCoefmat}{printCoefma... ! Undefined control sequence. \code {ts.eps}: l.25502 \item[\code{ts.eps}:] the relative tolerance for certain time series ! Undefined control sequence. l.25503 (\code {\LinkA{ts}{ts}}) computations. Default \code{1e-05}. ! Undefined control sequence. l.25503 (\code{\LinkA {ts}{ts}}) computations. Default \code{1e-05}. ! Undefined control sequence. l.25503 ...{ts}{ts}}) computations. Default \code {1e-05}. ! Undefined control sequence. \code {ts.S.compat}: l.25505 \item[\code{ts.S.compat}:] logical. Used to select S compatibility ! Undefined control sequence. l.25507 \code {log} in \code{\LinkA{plot.spec}{plot.spec}}. ! Undefined control sequence. l.25507 \code{log} in \code {\LinkA{plot.spec}{plot.spec}}. ! Undefined control sequence. l.25507 \code{log} in \code{\LinkA {plot.spec}{plot.spec}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25511 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25513 \begin{Section} {Options set in package utils} ! Undefined control sequence. l.25514 These will be set when package \pkg {utils} (or its namespace) ! Undefined control sequence. \code {BioC\_mirror}: l.25518 \item[\code{BioC\_mirror}:] The URL of a Bioconductor mirror ! Undefined control sequence. l.25519 for use by \code {\LinkA{setRepositories}{setRepositories}}, ! Undefined control sequence. l.25519 for use by \code{\LinkA {setRepositories}{setRepositories}}, ! Undefined control sequence. l.25520 e.g.~the default \samp {"https://bioconductor.org"} ! Undefined control sequence. l.25522 \samp {"https://bioconductor.statistik.tu-dortmund.de"}. Can be set ! Undefined control sequence. l.25523 by \code {\LinkA{chooseBioCmirror}{chooseBioCmirror}}. ! Undefined control sequence. l.25523 by \code{\LinkA {chooseBioCmirror}{chooseBioCmirror}}. ! Undefined control sequence. \code {browser}: l.25525 \item[\code{browser}:] The HTML browser to be used by ! Undefined control sequence. l.25526 \code {\LinkA{browseURL}{browseURL}}. This sets the default browser ... ! Undefined control sequence. l.25526 \code{\LinkA {browseURL}{browseURL}}. This sets the default browser ... ! Undefined control sequence. l.25527 ...owser on Windows. Alternatively, an \R {} function ! Undefined control sequence. l.25529 \code {\LinkA{browseURL}{browseURL}} for further details. ! Undefined control sequence. l.25529 \code{\LinkA {browseURL}{browseURL}} for further details. ! Undefined control sequence. \code {ccaddress}: l.25531 \item[\code{ccaddress}:] default Cc: address used by ! Undefined control sequence. l.25532 \code {\LinkA{create.post}{create.post}} (and hence\code{\LinkA{bug.r... ! Undefined control sequence. l.25532 \code{\LinkA {create.post}{create.post}} (and hence\code{\LinkA{bug.r... ! Undefined control sequence. l.25532 ...ate.post}{create.post}} (and hence\code {\LinkA{bug.report}{bug.re... ! Undefined control sequence. l.25532 ...t}{create.post}} (and hence\code{\LinkA {bug.report}{bug.report}} and ! Undefined control sequence. l.25533 \code {\LinkA{help.request}{help.request}}). Can be \code{FALSE} or ... ! Undefined control sequence. l.25533 \code{\LinkA {help.request}{help.request}}). Can be \code{FALSE} or ... ! Undefined control sequence. l.25533 ...request}{help.request}}). Can be \code {FALSE} or \code{""}. ! Undefined control sequence. l.25533 ...quest}}). Can be \code{FALSE} or \code {""}. ! Undefined control sequence. \code {citation.bibtex.max}: l.25535 \item[\code{citation.bibtex.max}:] default 1; the maximal number of ! Undefined control sequence. l.25536 bibentries (\code {\LinkA{bibentry}{bibentry}}) in a \code{\LinkA{cit... ! Undefined control sequence. l.25536 bibentries (\code{\LinkA {bibentry}{bibentry}}) in a \code{\LinkA{cit... ! Undefined control sequence. l.25536 ...\LinkA{bibentry}{bibentry}}) in a \code {\LinkA{citation}{citation... ! Undefined control sequence. l.25536 ...bibentry}{bibentry}}) in a \code{\LinkA {citation}{citation}} for ! Undefined control sequence. \code {de.cellwidth}: l.25539 \item[\code{de.cellwidth}:] integer: the cell widths (number of ! Undefined control sequence. l.25540 ...rs) to be used in the data editor \code {\LinkA{dataentry}{dataent... ! Undefined control sequence. l.25540 ...be used in the data editor \code{\LinkA {dataentry}{dataentry}}. ! Undefined control sequence. l.25541 ...set (the default), 0, negative or \code {NA}, variable ! Undefined control sequence. \code {demo.ask}: l.25544 \item[\code{demo.ask}:] default for the \code{ask} argument of ! Undefined control sequence. l.25544 ...\code{demo.ask}:] default for the \code {ask} argument of ! Undefined control sequence. l.25545 \code {\LinkA{demo}{demo}}. ! Undefined control sequence. l.25545 \code{\LinkA {demo}{demo}}. ! Undefined control sequence. \code {editor}: l.25547 \item[\code{editor}:] a non-empty string or a function that sets the ! Undefined control sequence. l.25548 default text editor, e.g., for \code {\LinkA{edit}{edit}}. Set from the ! Undefined control sequence. l.25548 ...ult text editor, e.g., for \code{\LinkA {edit}{edit}}. Set from the ! Undefined control sequence. l.25549 environment variable \env {EDITOR} on UNIX, or if unset ! Undefined control sequence. l.25550 \env {VISUAL} or \command{vi}. ! Undefined control sequence. l.25550 \env{VISUAL} or \command {vi}. ! Undefined control sequence. \code {example.ask}: l.25552 \item[\code{example.ask}:] default for the \code{ask} argument of ! Undefined control sequence. l.25552 ...de{example.ask}:] default for the \code {ask} argument of ! Undefined control sequence. l.25553 \code {\LinkA{example}{example}}. ! Undefined control sequence. l.25553 \code{\LinkA {example}{example}}. [249] ! Undefined control sequence. \code {help.ports}: l.25555 \item[\code{help.ports}:] optional integer vector for setting ports ! Undefined control sequence. l.25556 of the internal HTTP server, see \code {\LinkA{startDynamicHelp}{star... ! Undefined control sequence. l.25556 ... internal HTTP server, see \code{\LinkA {startDynamicHelp}{startDy... ! Undefined control sequence. \code {help.search.types}: l.25558 \item[\code{help.search.types}:] default types of documentation ! Undefined control sequence. l.25559 to be searched by \code {\LinkA{help.search}{help.search}} and \code{... ! Undefined control sequence. l.25559 to be searched by \code{\LinkA {help.search}{help.search}} and \code{... ! Undefined control sequence. l.25559 ...kA{help.search}{help.search}} and \code {\LinkA{??}{??}}. ! Undefined control sequence. l.25559 ....search}{help.search}} and \code{\LinkA {??}{??}}. Underfull \hbox (badness 2600) in paragraph at lines 25558--25560 []\OT1/cmr/m/n/10 default types of doc-u-men-ta-tion to be searched by ! Undefined control sequence. \code {help.try.all.packages}: l.25561 \item[\code{help.try.all.packages}:] default for an argument of ! Undefined control sequence. l.25562 \code {\LinkA{help}{help}}. ! Undefined control sequence. l.25562 \code{\LinkA {help}{help}}. ! Undefined control sequence. \code {help\_type}: l.25564 \item[\code{help\_type}:] default for an argument of ! Undefined control sequence. l.25565 \code {\LinkA{help}{help}}, used also as the help type by \code{\Link... ! Undefined control sequence. l.25565 \code{\LinkA {help}{help}}, used also as the help type by \code{\Link... ! Undefined control sequence. l.25565 ...}}, used also as the help type by \code {\LinkA{?}{?}}. ! Undefined control sequence. l.25565 ...d also as the help type by \code{\LinkA {?}{?}}. ! Undefined control sequence. \code {HTTPUserAgent}: l.25567 \item[\code{HTTPUserAgent}:] string used as the user agent in HTTP(S) ! Undefined control sequence. l.25568 requests. If \code {NULL}, requests will be made without a ! Undefined control sequence. l.25570 The default is \code {R ( )} . ! Undefined control sequence. \code {install.lock}: l.25572 \item[\code{install.lock}:] logical: should per-directory package ! Undefined control sequence. l.25573 locking be used by \code {\LinkA{install.packages}{install.packages}}... ! Undefined control sequence. l.25573 locking be used by \code{\LinkA {install.packages}{install.packages}}... ! Undefined control sequence. l.25576 \command {R CMD \LinkA{INSTALL}{INSTALL}}. For binary installs, can ... ! Undefined control sequence. l.25576 \command{R CMD \LinkA {INSTALL}{INSTALL}}. For binary installs, can ... ! Undefined control sequence. l.25577 the character string \code {"pkgloack"}. ! Undefined control sequence. \code {internet.info}: l.25579 \item[\code{internet.info}:] The minimum level of information to be ! Undefined control sequence. l.25580 ...d on URL downloads etc, using the \code {"internal"} and ! Undefined control sequence. l.25581 \code {"libcurl"} methods. ! Undefined control sequence. l.25583 detailed information (for the \code {"internal"} method 0 provides ! Undefined control sequence. \code {install.packages.check.source}: l.25587 ...[\code{install.packages.check.source}:] Used by ! Undefined control sequence. l.25588 \code {\LinkA{install.packages}{install.packages}} (and indirectly ! Undefined control sequence. l.25588 \code{\LinkA {install.packages}{install.packages}} (and indirectly ! Undefined control sequence. l.25589 \code {\LinkA{update.packages}{update.packages}}) on platforms which ... ! Undefined control sequence. l.25589 \code{\LinkA {update.packages}{update.packages}}) on platforms which ... ! Undefined control sequence. l.25590 packages. Possible values \code {"yes"} and \code{"no"}, with ! Undefined control sequence. l.25590 ... Possible values \code{"yes"} and \code {"no"}, with ! Undefined control sequence. l.25591 unset being equivalent to \code {"yes"}. ! Undefined control sequence. \code {install.packages.compile.from.source}: l.25593 ...install.packages.compile.from.source}:] Used by ! Undefined control sequence. l.25594 \code {\LinkA{install.packages}{install.packages}(type = "both")} (an... ! Undefined control sequence. l.25594 \code{\LinkA {install.packages}{install.packages}(type = "both")} (an... ! Undefined control sequence. l.25595 \code {\LinkA{update.packages}{update.packages}}) on platforms which ! Undefined control sequence. l.25595 \code{\LinkA {update.packages}{update.packages}}) on platforms which ! Undefined control sequence. l.25596 ...ry packages. Possible values are \code {"never"}, ! Undefined control sequence. l.25597 \code {"interactive"} (which means ask in interactive use and ! Undefined control sequence. l.25598 \code {"never"} in batch use) and \code{"always"}. The default is ! Undefined control sequence. l.25598 \code{"never"} in batch use) and \code {"always"}. The default is ! Undefined control sequence. l.25600 \env {R\_COMPILE\_AND\_INSTALL\_PACKAGES}, with default ! Undefined control sequence. l.25601 \code {"interactive"} if unset. However, \code{install.packages} ! Undefined control sequence. l.25601 ...interactive"} if unset. However, \code {install.packages} ! Undefined control sequence. l.25602 uses \code {"never"} unless a \command{make} program is found, ! Undefined control sequence. l.25602 uses \code{"never"} unless a \command {make} program is found, ! Undefined control sequence. l.25603 consulting the environment variable \env {MAKE}. Underfull \hbox (badness 10000) in paragraph at lines 25593--25604 []\OT1/cmr/m/n/10 Used by in- Underfull \hbox (badness 8132) in paragraph at lines 25593--25604 \OT1/cmr/m/n/10 stall.packagesinstall.packages(type = "both") (and in-di-rectly up- ! Undefined control sequence. \code {mailer}: l.25605 \item[\code{mailer}:] default emailing method used by ! Undefined control sequence. l.25606 \code {\LinkA{create.post}{create.post}} and hence \code{\LinkA{bug.r... ! Undefined control sequence. l.25606 \code{\LinkA {create.post}{create.post}} and hence \code{\LinkA{bug.r... ! Undefined control sequence. l.25606 ...ate.post}{create.post}} and hence \code {\LinkA{bug.report}{bug.re... ! Undefined control sequence. l.25606 ...t}{create.post}} and hence \code{\LinkA {bug.report}{bug.report}} and ! Undefined control sequence. l.25607 \code {\LinkA{help.request}{help.request}}. ! Undefined control sequence. l.25607 \code{\LinkA {help.request}{help.request}}. ! Undefined control sequence. \code {menu.graphics}: l.25609 \item[\code{menu.graphics}:] Logical: should graphical menus be used ! Undefined control sequence. l.25610 if available?. Defaults to \code {TRUE}. Currently applies to ! Undefined control sequence. l.25611 \code {\LinkA{select.list}{select.list}}, \code{\LinkA{chooseCRANmirr... ! Undefined control sequence. l.25611 \code{\LinkA {select.list}{select.list}}, \code{\LinkA{chooseCRANmirr... ! Undefined control sequence. l.25611 ...LinkA{select.list}{select.list}}, \code {\LinkA{chooseCRANmirror}{... ! Undefined control sequence. l.25611 ...elect.list}{select.list}}, \code{\LinkA {chooseCRANmirror}{chooseC... ! Undefined control sequence. l.25612 \code {\LinkA{setRepositories}{setRepositories}} and to select from m... ! Undefined control sequence. l.25612 \code{\LinkA {setRepositories}{setRepositories}} and to select from m... ! Undefined control sequence. l.25613 help files in \code {\LinkA{help}{help}}. ! Undefined control sequence. l.25613 help files in \code{\LinkA {help}{help}}. ! Undefined control sequence. \code {pkgType}: l.25615 \item[\code{pkgType}:] The default type of packages to be downloaded ! Undefined control sequence. l.25616 and installed -- see \code {\LinkA{install.packages}{install.packages}}. ! Undefined control sequence. l.25616 and installed -- see \code{\LinkA {install.packages}{install.packages}}. ! Undefined control sequence. l.25617 Possible values are \code {"source"} (the default except under a ! Undefined control sequence. l.25618 CRAN macOS build), \code {"mac.binary.el-capitan"} and ! Undefined control sequence. l.25619 \code {"both"} (the default for CRAN macOS builds). Windows uses ! Undefined control sequence. l.25620 \code {"win.binary"}. (\code{"mac.binary.mavericks"}, ! Undefined control sequence. l.25620 \code{"win.binary"}. (\code {"mac.binary.mavericks"}, ! Undefined control sequence. l.25621 \code {"mac.binary.leopard"}, \code{"mac.binary.universal"} are no ! Undefined control sequence. l.25621 \code{"mac.binary.leopard"}, \code {"mac.binary.universal"} are no ! Undefined control sequence. l.25623 Value \code {"binary"} is a synonym for the native binary type (if ! Undefined control sequence. l.25624 there is one); \code {"both"} is used by ! Undefined control sequence. l.25625 \code {\LinkA{install.packages}{install.packages}} to choose between ... ! Undefined control sequence. l.25625 \code{\LinkA {install.packages}{install.packages}} to choose between ... [250] ! Undefined control sequence. \code {repos}: l.25629 \item[\code{repos}:] URLs of the repositories for use by ! Undefined control sequence. l.25630 \code {\LinkA{update.packages}{update.packages}}. Defaults to ! Undefined control sequence. l.25630 \code{\LinkA {update.packages}{update.packages}}. Defaults to ! Undefined control sequence. l.25631 \code {c(CRAN="@CRAN@")}, a value that causes some utilities to ! Undefined control sequence. l.25634 \code {local(\{r <- getOption("repos"); r["CRAN"] <- "http://my.local... ! Undefined control sequence. l.25639 using \code {\LinkA{setRepositories}{setRepositories}}. ! Undefined control sequence. l.25639 using \code{\LinkA {setRepositories}{setRepositories}}. Underfull \hbox (badness 1406) in paragraph at lines 25637--25640 []\OT1/cmr/m/n/10 Note that you can add more repos-i-to-ries (Bio-con-duc-tor, R-Forge, ! Undefined control sequence. \code {SweaveHooks}, \code {SweaveSyntax}: l.25641 ...ode{SweaveHooks}, \code{SweaveSyntax}:] ! Undefined control sequence. \code {SweaveHooks}, \code {SweaveSyntax}: l.25641 ...ode{SweaveHooks}, \code{SweaveSyntax}:] ! Undefined control sequence. l.25642 see \code {\LinkA{Sweave}{Sweave}}. ! Undefined control sequence. l.25642 see \code{\LinkA {Sweave}{Sweave}}. ! Undefined control sequence. \code {unzip}: l.25645 \item[\code{unzip}:] a character string used by \code{\LinkA{unzip}{... ! Undefined control sequence. l.25645 ...zip}:] a character string used by \code {\LinkA{unzip}{unzip}}: ! Undefined control sequence. l.25645 ...a character string used by \code{\LinkA {unzip}{unzip}}: ! Undefined control sequence. l.25646 the path of the external program \command {unzip} or \code{"internal"}. ! Undefined control sequence. l.25646 ...ternal program \command{unzip} or \code {"internal"}. ! Undefined control sequence. l.25647 Defaults to the value of \env {R\_UNZIPCMD}, which is set in ! Undefined control sequence. l.25648 \file {etc/Renviron} if an \code{unzip} command was found during ! Undefined control sequence. l.25648 \file{etc/Renviron} if an \code {unzip} command was found during ! Undefined control sequence. \code {useHTTPS}: l.25652 \item[\code{useHTTPS}:] logical. Used by \code{\LinkA{chooseCRANmir... ! Undefined control sequence. l.25652 ...ode{useHTTPS}:] logical. Used by \code {\LinkA{chooseCRANmirror}{... ! Undefined control sequence. l.25652 ...HTTPS}:] logical. Used by \code{\LinkA {chooseCRANmirror}{chooseC... ! Undefined control sequence. l.25653 ...e mirrors preferred? If not set, \code {TRUE} is assumed. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25657 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25659 \begin{Section} {Options set in package parallel} ! Undefined control sequence. l.25660 These will be set when package \pkg {parallel} (or its namespace) ! Undefined control sequence. \code {mc.cores}: l.25664 \item[\code{mc.cores}:] a integer giving the maximum allowed number ! Undefined control sequence. l.25665 of \emph{additional} \R {} processes allowed to be run in parallel to ! Undefined control sequence. l.25666 the current \R {} process. Defaults to the setting of the ! Undefined control sequence. l.25667 environment variable \env {MC\_CORES} if set. Most applications ! Undefined control sequence. l.25668 which use this assume a limit of \code {2} if it is unset. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25673 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25675 \begin{Section} {Options used on Unix only} ! Undefined control sequence. \code {dvipscmd}: l.25678 \item[\code{dvipscmd}:] character string giving a command to be used in ! Undefined control sequence. l.25680 PostScript. Defaults to \command {"dvips"}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25684 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25686 \begin{Section} {Options used on Windows only} ! Undefined control sequence. \code {warn.FPU}: l.25689 \item[\code{warn.FPU}:] logical, by default undefined. If true, ! Undefined control sequence. l.25690 a \LinkA {warning}{warning} is produced whenever \LinkA{dyn.load}{dyn... ! Undefined control sequence. l.25690 ...g}{warning} is produced whenever \LinkA {dyn.load}{dyn.load} repai... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25695 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25697 \begin{Note} \relax ! Undefined control sequence. l.25698 ... with S there is a visible object \code {.Options} whose ! Undefined control sequence. l.25699 ... pairlist containing the current \code {options()} (in no ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25702 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25704 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25708 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25710 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25711 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.25712 op <- options(); utils::str(op) # op is a named list ! You can't use `macro parameter character #' in math mode. l.25714 getOption("width") == options()$width # the latter needs more memory ! Missing $ inserted. $ l.25717 Overfull \hbox (38.61465pt too wide) in paragraph at lines 25714--25717 []\OT1/cmr/m/n/10 getOption("width") == options()$\OML/cmm/m/it/10 widththelatt erneedsmorememoryoptions\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 digits \OT1/cmr/m/n/1 0 = ! You can't use `macro parameter character #' in vertical mode. l.25718 # set the editor, and save previous value ! You can't use `macro parameter character #' in horizontal mode. l.25723 x <- NULL; x[4] <- "yes" # gives a warning [251] ! You can't use `macro parameter character #' in horizontal mode. l.25729 options(op) # reset (all) initial options ! You can't use `macro parameter character #' in vertical mode. l.25732 # # Not run: ## set contrast handling to be like S ! You can't use `macro parameter character #' in vertical mode. l.25732 ## Not run: ## set contrast handling to be like S ! You can't use `macro parameter character #' in horizontal mode. l.25732 ## Not run: # # set contrast handling to be like S ! You can't use `macro parameter character #' in horizontal mode. l.25732 ## Not run: ## set contrast handling to be like S Underfull \hbox (badness 1158) in paragraph at lines 25732--25734 []\OT1/cmr/m/n/10 Not run: set con-trast han-dling to be like S op-tions(contr asts = ! You can't use `macro parameter character #' in vertical mode. l.25735 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25735 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25737 # # Not run: ## on error, terminate the R session with error status 66 ! You can't use `macro parameter character #' in vertical mode. l.25737 ## Not run: ## on error, terminate the R session with error status 66 ! You can't use `macro parameter character #' in horizontal mode. l.25737 ## Not run: # # on error, terminate the R session with error status 66 ! You can't use `macro parameter character #' in horizontal mode. l.25737 ## Not run: ## on error, terminate the R session with error status 66 ! You can't use `macro parameter character #' in vertical mode. l.25741 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25741 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25743 # # Not run: ## Set error actions for debugging: ! You can't use `macro parameter character #' in vertical mode. l.25743 ## Not run: ## Set error actions for debugging: ! You can't use `macro parameter character #' in horizontal mode. l.25743 ## Not run: # # Set error actions for debugging: ! You can't use `macro parameter character #' in horizontal mode. l.25743 ## Not run: ## Set error actions for debugging: ! You can't use `macro parameter character #' in horizontal mode. l.25744 # # enter browser on error, see ?recover: ! You can't use `macro parameter character #' in horizontal mode. l.25744 ## enter browser on error, see ?recover: ! You can't use `macro parameter character #' in horizontal mode. l.25746 # # allows to call debugger() afterwards, see ?debugger: ! You can't use `macro parameter character #' in horizontal mode. l.25746 ## allows to call debugger() afterwards, see ?debugger: ! You can't use `macro parameter character #' in horizontal mode. l.25748 # # A possible setting for non-interactive sessions ! You can't use `macro parameter character #' in horizontal mode. l.25748 ## A possible setting for non-interactive sessions ! You can't use `macro parameter character #' in vertical mode. l.25751 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25751 ## End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25753 # Compare the two ways to get an option and use it ! You can't use `macro parameter character #' in horizontal mode. l.25754 # acconting for the possibility it might not be set. ! Undefined control sequence. l.25756 cat("do cleanup\n ") ! You can't use `macro parameter character #' in vertical mode. l.25758 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.25758 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.25759 # a clumsier way of expressing the above w/o the default. ! Undefined control sequence. l.25764 cat("do cleanup\n ") ! You can't use `macro parameter character #' in vertical mode. l.25766 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.25766 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25768 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25769 \end{Examples} ! Undefined control sequence. l.25770 \HeaderA {order}{Ordering Permutation}{order} ! Undefined control sequence. l.25771 \aliasA {sort.list}{order}{sort.list} ! Undefined control sequence. l.25772 \keyword {univar}{order} ! Undefined control sequence. l.25773 \keyword {manip}{order} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25775 \begin{Description} \relax ! Undefined control sequence. l.25776 \code {order} returns a permutation which rearranges its first ! Undefined control sequence. l.25778 arguments. \code {sort.list} is the same, using only one argument.\\{} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25781 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25783 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25791 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25793 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25794 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25795 \item[\code{...}] a sequence of numeric, complex, character or logical ! Undefined control sequence. l.25796 ...all of the same length, or a classed \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25797 \item[\code{x}] an atomic vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25798 \item[\code{partial}] vector of indices for partial sorting. ! Undefined control sequence. l.25799 (Non-\code {NULL} values are not implemented.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25800 \item[\code{decreasing}] logical. Should the sort order be increasi... ! Undefined control sequence. l.25801 decreasing? For the \code {"radix"} method, this can be a vector of ! Undefined control sequence. l.25802 ...ual to the number of arguments in \code {...}. For the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25804 \item[\code{na.last}] for controlling the treatment of \code{NA}s. ! Undefined control sequence. l.25804 ... for controlling the treatment of \code {NA}s. ! Undefined control sequence. l.25805 If \code {TRUE}, missing values in the data are put last; if ! Undefined control sequence. l.25806 \code {FALSE}, they are put first; if \code{NA}, they are removed ! Undefined control sequence. l.25806 \code{FALSE}, they are put first; if \code {NA}, they are removed ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25808 \item[\code{method}] the method to be used: partial matches are allo... ! Undefined control sequence. l.25809 default (\code {"auto"}) implies \code{"radix"} for short numeric vec... ! Undefined control sequence. l.25809 default (\code{"auto"}) implies \code {"radix"} for short numeric vec... ! Undefined control sequence. l.25811 Otherwise, it implies \code {"shell"}. ! Undefined control sequence. l.25812 For details of methods \code {"shell"}, ! Undefined control sequence. l.25813 \code {"quick"}, and \code{"radix"}, ! Undefined control sequence. l.25813 \code{"quick"}, and \code {"radix"}, ! Undefined control sequence. l.25814 see the help for \code {\LinkA{sort}{sort}}. ! Undefined control sequence. l.25814 see the help for \code{\LinkA {sort}{sort}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25815 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25816 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25818 \begin{Details} \relax ! Undefined control sequence. l.25822 ...used is \emph{stable} (except for \code {method = "quick"}), [252] ! Undefined control sequence. l.25828 Except for method \code {"radix"}, the sort order for character vectors ! Undefined control sequence. l.25830 \code {\LinkA{Comparison}{Comparison}}. ! Undefined control sequence. l.25830 \code{\LinkA {Comparison}{Comparison}}. ! Undefined control sequence. l.25832 The \code {"shell"} method is generally the safest bet and is the ! Undefined control sequence. l.25834 ...ectors and logical vectors, where \code {"radix"} is assumed. ! Undefined control sequence. l.25835 Method \code {"radix"} stably sorts logical, ! Undefined control sequence. l.25837 ..., although there are caveats (see \code {\LinkA{sort}{sort}}). Me... ! Undefined control sequence. l.25837 ...ugh there are caveats (see \code{\LinkA {sort}{sort}}). Method ! Undefined control sequence. l.25838 \code {"quick"} for \code{sort.list} is only supported for numeric ! Undefined control sequence. l.25838 \code{"quick"} for \code {sort.list} is only supported for numeric ! Undefined control sequence. l.25839 \code {x} with \code{na.last = NA}, is not stable, and is slower than ! Undefined control sequence. l.25839 \code{x} with \code {na.last = NA}, is not stable, and is slower than ! Undefined control sequence. l.25840 \code {"radix"}. ! Undefined control sequence. l.25842 \code {partial = NULL} is supported for compatibility with other ! Undefined control sequence. l.25846 For a classed \R {} object, the sort order is taken from ! Undefined control sequence. l.25847 \code {\LinkA{xtfrm}{xtfrm}}: as its help page notes, this can be slo... ! Undefined control sequence. l.25847 \code{\LinkA {xtfrm}{xtfrm}}: as its help page notes, this can be slo... ! Undefined control sequence. l.25848 suitable method has been defined or \code {\LinkA{is.numeric}{is.nume... ! Undefined control sequence. l.25848 ...method has been defined or \code{\LinkA {is.numeric}{is.numeric}(x... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25851 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25853 \begin{Value} ! Undefined control sequence. l.25854 ...ector unless any of the inputs has \eqn {2^{31}}{} or ! Missing $ inserted. $ l.25854 ...or unless any of the inputs has \eqn{2^ {31}}{} or ! Extra }, or forgotten $. l.25854 ...less any of the inputs has \eqn{2^{31}} {} or ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25856 \end{Value} ! Missing $ inserted. $ l.25856 \end{Value} ! Missing } inserted. } l.25856 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25858 \begin{Section} {Warning} ! Undefined control sequence. l.25859 ...atic use it is unsafe to name the \code {...} arguments, ! Undefined control sequence. l.25861 arguments such as \code {decreasing}. A sometimes-encountered unsafe ! Undefined control sequence. l.25862 practice is to call \code {do.call('order', df\_obj)} where ! Undefined control sequence. l.25863 \code {df\_obj} might be a data frame: copy \code{df\_obj} and ! Undefined control sequence. l.25863 ..._obj} might be a data frame: copy \code {df\_obj} and ! Undefined control sequence. l.25864 remove any names, for example using \code {\LinkA{unname}{unname}}. ! Undefined control sequence. l.25864 ...y names, for example using \code{\LinkA {unname}{unname}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25865 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25867 \begin{Note} \relax ! Undefined control sequence. l.25868 \code {sort.list} can get called by mistake as a method for ! Undefined control sequence. l.25869 \code {\LinkA{sort}{sort}} with a list argument: it gives a suitable ... ! Undefined control sequence. l.25869 \code{\LinkA {sort}{sort}} with a list argument: it gives a suitable ... ! Undefined control sequence. l.25870 message for list \code {x}. ! Undefined control sequence. l.25872 ...rical difference in behaviour for \code {na.last = NA}: ! Undefined control sequence. l.25873 \code {sort.list} removes the \code{NA}s and then computes the order ! Undefined control sequence. l.25873 \code{sort.list} removes the \code {NA}s and then computes the order ! Undefined control sequence. l.25874 amongst the remaining elements: \code {order} computes the order ! Undefined control sequence. l.25875 amongst the non-\code {NA} elements of the original vector. Thus ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25876 \begin{alltt} x[order(x, na.last = NA)] ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25878 \end{alltt} ! Undefined control sequence. l.25880 both sort the non-\code {NA} values of \code{x}. ! Undefined control sequence. l.25880 ... sort the non-\code{NA} values of \code {x}. ! Undefined control sequence. l.25882 Prior to \R {} 3.3.0 \code{method = "radix"} was only supported for ! Undefined control sequence. l.25882 Prior to \R{} 3.3.0 \code {method = "radix"} was only supported for ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25884 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25886 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25894 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25896 \begin{SeeAlso} \relax ! Undefined control sequence. l.25897 \code {\LinkA{sort}{sort}}, \code{\LinkA{rank}{rank}}, \code{\LinkA{x... ! Undefined control sequence. l.25897 \code{\LinkA {sort}{sort}}, \code{\LinkA{rank}{rank}}, \code{\LinkA{x... ! Undefined control sequence. l.25897 \code{\LinkA{sort}{sort}}, \code {\LinkA{rank}{rank}}, \code{\LinkA{x... ! Undefined control sequence. l.25897 \code{\LinkA{sort}{sort}}, \code{\LinkA {rank}{rank}}, \code{\LinkA{x... ! Undefined control sequence. l.25897 ...ort}}, \code{\LinkA{rank}{rank}}, \code {\LinkA{xtfrm}{xtfrm}}. ! Undefined control sequence. l.25897 ...\code{\LinkA{rank}{rank}}, \code{\LinkA {xtfrm}{xtfrm}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25898 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25900 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25901 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.25905 # # 6 5 2 1 7 4 10 8 3 9 ! You can't use `macro parameter character #' in horizontal mode. l.25905 ## 6 5 2 1 7 4 10 8 3 9 ! You can't use `macro parameter character #' in horizontal mode. l.25906 rbind(x, y, z)[,ii] # shows the reordering (ties via 2nd & 3rd arg) ! Misplaced alignment tab character &. l.25906 ... # shows the reordering (ties via 2nd & 3rd arg) ! You can't use `macro parameter character #' in vertical mode. l.25908 # # Suppose we wanted descending order on y. ! You can't use `macro parameter character #' in vertical mode. l.25908 ## Suppose we wanted descending order on y. ! You can't use `macro parameter character #' in horizontal mode. l.25909 # # A simple solution for numeric 'y' is ! You can't use `macro parameter character #' in horizontal mode. l.25909 ## A simple solution for numeric 'y' is ! You can't use `macro parameter character #' in horizontal mode. l.25911 # # More generally we can make use of xtfrm ! You can't use `macro parameter character #' in horizontal mode. l.25911 ## More generally we can make use of xtfrm ! You can't use `macro parameter character #' in horizontal mode. l.25914 # # The radix sort supports multiple 'decreasing' values: ! You can't use `macro parameter character #' in horizontal mode. l.25914 ## The radix sort supports multiple 'decreasing' values: ! You can't use `macro parameter character #' in vertical mode. l.25918 # # Sorting data frames: ! You can't use `macro parameter character #' in vertical mode. l.25918 ## Sorting data frames: ! You can't use `macro parameter character #' in horizontal mode. l.25921 # # Either as above {for factor 'z' : using internal coding}: ! You can't use `macro parameter character #' in horizontal mode. l.25921 ## Either as above {for factor 'z' : using internal coding}: ! You can't use `macro parameter character #' in horizontal mode. l.25923 # # or along 1st column, ties along 2nd, ... *arbitrary* no.{columns}: ! You can't use `macro parameter character #' in horizontal mode. l.25923 ## or along 1st column, ties along 2nd, ... *arbitrary* no.{columns}: ! You can't use `macro parameter character #' in horizontal mode. l.25926 set.seed(1) # reproducible example: ! You can't use `macro parameter character #' in horizontal mode. l.25931 # in 2 places, needed 3 cols to break ties: Underfull \hbox (badness 4429) in paragraph at lines 25926--25933 []\OT1/cmr/m/n/10 set.seed(1) re-pro-ducible ex-am-ple: d4 <- data.frame(x = r ound( ! You can't use `macro parameter character #' in vertical mode. l.25934 # # rearrange matched vectors so that the first is in ascending order ! You can't use `macro parameter character #' in vertical mode. l.25934 ## rearrange matched vectors so that the first is in ascending order ! Missing $ inserted. $ l.25936 y <- (x - 5)^ 2 ! Missing $ inserted. $ l.25939 [253] ! You can't use `macro parameter character #' in vertical mode. l.25940 # # tests of na.last ! You can't use `macro parameter character #' in vertical mode. l.25940 ## tests of na.last ! You can't use `macro parameter character #' in vertical mode. l.25949 # # speed examples on an average laptop for long vectors: ! You can't use `macro parameter character #' in vertical mode. l.25949 ## speed examples on an average laptop for long vectors: ! You can't use `macro parameter character #' in horizontal mode. l.25950 # # factor/small-valued integers: ! You can't use `macro parameter character #' in horizontal mode. l.25950 ## factor/small-valued integers: ! You can't use `macro parameter character #' in horizontal mode. l.25952 ...t(x, method = "quick", na.last = NA)) # 0.1 sec ! You can't use `macro parameter character #' in horizontal mode. l.25954 ...(o <- sort.list(x, method = "radix")) # 0.05 sec, 2X faster ! You can't use `macro parameter character #' in horizontal mode. l.25956 # # large-valued integers: ! You can't use `macro parameter character #' in horizontal mode. l.25956 ## large-valued integers: ! You can't use `macro parameter character #' in horizontal mode. l.25958 ...(xx, method = "quick", na.last = NA)) # 0.3 sec ! You can't use `macro parameter character #' in horizontal mode. l.25959 ...o <- sort.list(xx, method = "radix")) # 0.2 sec ! You can't use `macro parameter character #' in horizontal mode. l.25960 # # character vectors: ! You can't use `macro parameter character #' in horizontal mode. l.25960 ## character vectors: ! You can't use `macro parameter character #' in horizontal mode. l.25962 ...o <- sort.list(xx, method = "shell")) # 2 sec ! You can't use `macro parameter character #' in horizontal mode. l.25963 ...o <- sort.list(xx, method = "radix")) # 0.007 sec, 300X faster ! You can't use `macro parameter character #' in horizontal mode. l.25964 # # double vectors: ! You can't use `macro parameter character #' in horizontal mode. l.25964 ## double vectors: ! You can't use `macro parameter character #' in horizontal mode. l.25966 ...o <- sort.list(xx, method = "shell")) # 0.4 sec ! You can't use `macro parameter character #' in horizontal mode. l.25967 ...(xx, method = "quick", na.last = NA)) # 0.1 sec ! You can't use `macro parameter character #' in horizontal mode. l.25968 ...o <- sort.list(xx, method = "radix")) # 0.05 sec, 2X faster ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25969 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25970 \end{Examples} ! Undefined control sequence. l.25971 \HeaderA {outer}{Outer Product of Arrays}{outer} ! Undefined control sequence. l.25972 \aliasA {\%o\%}{outer}{.Rpcent.o.Rpcent.} ! Undefined control sequence. l.25973 \keyword {array}{outer} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25975 \begin{Description} \relax ! Undefined control sequence. l.25976 The outer product of the arrays \code {X} and \code{Y} is the array ! Undefined control sequence. l.25976 ...roduct of the arrays \code{X} and \code {Y} is the array ! Undefined control sequence. l.25977 \code {A} with dimension \code{c(dim(X), dim(Y))} where element ! Undefined control sequence. l.25977 \code{A} with dimension \code {c(dim(X), dim(Y))} where element ! Undefined control sequence. l.25978 \code {A[c(arrayindex.x, arrayindex.y)] ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25980 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25982 \begin{Usage} Underfull \hbox (badness 1546) in paragraph at lines 25949--25983 \OT1/cmr/m/n/10 tem.time(o <- sort.list(x, method = "quick", na.last = NA)) 0. 1 sec ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25987 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25989 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25990 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25991 \item[\code{X, Y}] First and second arguments for function \code{FUN}. ! Undefined control sequence. l.25991 ...and second arguments for function \code {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25993 \item[\code{FUN}] a function to use on the outer products, found \em... ! Undefined control sequence. l.25994 \code {\LinkA{match.fun}{match.fun}} (except for the special case \co... ! Undefined control sequence. l.25994 \code{\LinkA {match.fun}{match.fun}} (except for the special case \co... ! Undefined control sequence. l.25994 ...un}} (except for the special case \code {"*"}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25995 \item[\code{...}] optional arguments to be passed to \code{FUN}. ! Undefined control sequence. l.25995 ...ptional arguments to be passed to \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25996 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25997 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25999 \begin{Details} \relax ! Undefined control sequence. l.26000 \code {X} and \code{Y} must be suitable arguments for \code{FUN}. Each ! Undefined control sequence. l.26000 \code{X} and \code {Y} must be suitable arguments for \code{FUN}. Each ! Undefined control sequence. l.26000 ...Y} must be suitable arguments for \code {FUN}. Each ! Undefined control sequence. l.26001 will be extended by \code {\LinkA{rep}{rep}} to length the products o... ! Undefined control sequence. l.26001 will be extended by \code{\LinkA {rep}{rep}} to length the products o... ! Undefined control sequence. l.26002 lengths of \code {X} and \code{Y} before \code{FUN} is called. ! Undefined control sequence. l.26002 lengths of \code{X} and \code {Y} before \code{FUN} is called. ! Undefined control sequence. l.26002 ...s of \code{X} and \code{Y} before \code {FUN} is called. ! Undefined control sequence. l.26004 \code {FUN} is called with these two extended vectors as arguments ! Undefined control sequence. l.26005 (plus any arguments in \code {...}). It must be a vectorized ! Undefined control sequence. l.26009 Where they exist, the [dim]names of \code {X} and \code{Y} will be ! Undefined control sequence. l.26009 ...t, the [dim]names of \code{X} and \code {Y} will be ! Undefined control sequence. l.26011 concatenation of the dimensions of \code {X} and \code{Y} (or lengths ! Undefined control sequence. l.26011 ...of the dimensions of \code{X} and \code {Y} (or lengths ! Undefined control sequence. l.26014 \code {FUN = "*"} is handled as a special case \emph{via} ! Undefined control sequence. l.26015 \code {as.vector(X) \%*\% t(as.vector(Y))}, and is intended only for Underfull \hbox (badness 3158) in paragraph at lines 26014--26017 []\OT1/cmr/m/n/10 FUN = "*" is han-dled as a spe-cial case \OT1/cmr/m/it/10 via \OT1/cmr/m/n/10 as.vector(X) %*% ! Undefined control sequence. l.26018 \code {\%o\%} is binary operator providing a wrapper for ! Undefined control sequence. l.26019 \code {outer(x, y, "*")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26020 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26022 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26024 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26026 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26030 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26032 \begin{SeeAlso} \relax ! Undefined control sequence. l.26033 \code {\LinkA{\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for usual ... ! Undefined control sequence. l.26033 \code{\LinkA {\Rpercent{}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for usual ... ! Undefined control sequence. l.26033 \code{\LinkA{\Rpercent {}*\Rpercent{}}{.Rpcent.*.Rpcent.}} for usual ... ! Undefined control sequence. l.26033 \code{\LinkA{\Rpercent{}*\Rpercent {}}{.Rpcent.*.Rpcent.}} for usual ... ! Undefined control sequence. l.26035 \code {\LinkA{kronecker}{kronecker}} which is based on \code{outer}; ! Undefined control sequence. l.26035 \code{\LinkA {kronecker}{kronecker}} which is based on \code{outer}; ! Undefined control sequence. l.26035 ...er}{kronecker}} which is based on \code {outer}; ! Undefined control sequence. l.26036 \code {\LinkA{Vectorize}{Vectorize}} for vectorizing a non-vectorized... ! Undefined control sequence. l.26036 \code{\LinkA {Vectorize}{Vectorize}} for vectorizing a non-vectorized... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26037 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26039 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26040 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26042 # Multiplication & Power Tables ! Misplaced alignment tab character &. l.26042 # Multiplication & Power Tables ! Missing $ inserted. $ l.26045 outer(y, x, "^ ") ! Missing $ inserted. $ l.26046 ! You can't use `macro parameter character #' in vertical mode. l.26049 # # three way multiplication table: ! You can't use `macro parameter character #' in vertical mode. l.26049 ## three way multiplication table: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26051 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26052 \end{Examples} ! Undefined control sequence. l.26053 \HeaderA {Paren}{Parentheses and Braces}{Paren} ! Undefined control sequence. l.26054 \aliasB {(}{Paren}{(} ! Undefined control sequence. l.26055 \aliasB {\{}{Paren}{.Rlbrace.} ! Undefined control sequence. l.26056 \keyword {programming}{Paren} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26058 \begin{Description} \relax ! Undefined control sequence. l.26059 Open parenthesis, \code {(}, and open brace, \code{\{}, are ! Undefined control sequence. l.26059 ...thesis, \code{(}, and open brace, \code {\{}, are ! Undefined control sequence. l.26060 \code {\LinkA{.Primitive}{.Primitive}} functions in \R{}. ! Undefined control sequence. l.26060 \code{\LinkA {.Primitive}{.Primitive}} functions in \R{}. ! Undefined control sequence. l.26060 ...Primitive}{.Primitive}} functions in \R {}. [254] ! Undefined control sequence. l.26062 Effectively, \code {(} is semantically equivalent to the identity ! Undefined control sequence. l.26063 \code {function(x) x}, whereas \code{\{} is slightly more interesting, ! Undefined control sequence. l.26063 \code{function(x) x}, whereas \code {\{} is slightly more interesting, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26065 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26067 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26073 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26075 \begin{Value} ! Undefined control sequence. l.26076 For \code {(}, the result of evaluating the argument. This has ! Undefined control sequence. l.26079 For \code {\{}, the result of the last expression evaluated. This has ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26081 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26083 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26087 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26089 \begin{SeeAlso} \relax ! Undefined control sequence. l.26090 \code {\LinkA{if}{if}}, \code{\LinkA{return}{return}}, etc for other ... ! Undefined control sequence. l.26090 \code{\LinkA {if}{if}}, \code{\LinkA{return}{return}}, etc for other ... ! Undefined control sequence. l.26090 \code{\LinkA{if}{if}}, \code {\LinkA{return}{return}}, etc for other ... ! Undefined control sequence. l.26090 \code{\LinkA{if}{if}}, \code{\LinkA {return}{return}}, etc for other ... ! Undefined control sequence. l.26091 the \R {} language itself. ! Undefined control sequence. l.26093 \code {\LinkA{Syntax}{Syntax}} for operator precedence. ! Undefined control sequence. l.26093 \code{\LinkA {Syntax}{Syntax}} for operator precedence. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26094 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26096 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26097 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.26105 # # note the differences ! You can't use `macro parameter character #' in vertical mode. l.26105 ## note the differences ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26110 \end{ExampleCode} ! Missing } inserted. } l.26110 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26111 \end{Examples} ! Undefined control sequence. l.26112 \HeaderA {parse}{Parse Expressions}{parse} ! Undefined control sequence. l.26113 \keyword {file}{parse} ! Undefined control sequence. l.26114 \keyword {programming}{parse} ! Undefined control sequence. l.26115 \keyword {connection}{parse} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26117 \begin{Description} \relax ! Undefined control sequence. l.26118 \code {parse} returns the parsed but unevaluated expressions in a ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26120 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26122 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26128 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26130 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26131 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26132 \item[\code{file}] a \LinkA{connection}{connection}, or a character ... ! Undefined control sequence. l.26132 \item[\code{file}] a \LinkA {connection}{connection}, or a character ... ! Undefined control sequence. l.26134 If \code {file} is \code{""} and \code{text} is missing or \code{NULL} ! Undefined control sequence. l.26134 If \code{file} is \code {""} and \code{text} is missing or \code{NULL} ! Undefined control sequence. l.26134 If \code{file} is \code{""} and \code {text} is missing or \code{NULL} ! Undefined control sequence. l.26134 ...""} and \code{text} is missing or \code {NULL} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26136 \item[\code{n}] integer (or coerced to integer). The maximum number of ! Undefined control sequence. l.26137 expressions to parse. If \code {n} is \code{NULL} or negative or ! Undefined control sequence. l.26137 ...essions to parse. If \code{n} is \code {NULL} or negative or ! Undefined control sequence. l.26138 \code {NA} the input is parsed in its entirety. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26139 \item[\code{text}] character vector. The text to parse. Elements a... ! Undefined control sequence. l.26140 as if they were lines of a file. Other \R {} objects will be coerced ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26142 \item[\code{prompt}] the prompt to print when parsing from the keybo... ! Undefined control sequence. l.26143 \code {NULL} means to use \R{}'s prompt, \code{getOption("prompt")}. ! Undefined control sequence. l.26143 \code{NULL} means to use \R {}'s prompt, \code{getOption("prompt")}. ! Undefined control sequence. l.26143 ...NULL} means to use \R{}'s prompt, \code {getOption("prompt")}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26144 \item[\code{keep.source}] a logical value; if \code{TRUE}, keep ! Undefined control sequence. l.26144 ...keep.source}] a logical value; if \code {TRUE}, keep ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26146 \item[\code{srcfile}] \code{NULL}, a character vector, or a ! Undefined control sequence. l.26146 \item[\code{srcfile}] \code {NULL}, a character vector, or a ! Undefined control sequence. l.26147 \code {\LinkA{srcfile}{srcfile}} object. See the `Details' section. }! Undefined control sequence. l.26147 \code{\LinkA {srcfile}{srcfile}} object. See the `Details' section. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26148 \item[\code{encoding}] encoding to be assumed for input strings. If... ! Undefined control sequence. l.26149 value is \code {"latin1"} or \code{"UTF-8"} it is used to mark ! Undefined control sequence. l.26149 value is \code{"latin1"} or \code {"UTF-8"} it is used to mark ! Undefined control sequence. l.26152 part of the connection \code {con} or \emph{via} ! Undefined control sequence. l.26153 \code {\LinkA{options}{options}(encoding=)}: see the example under ! Undefined control sequence. l.26153 \code{\LinkA {options}{options}(encoding=)}: see the example under ! Undefined control sequence. l.26154 \code {\LinkA{file}{file}}. ! Undefined control sequence. l.26154 \code{\LinkA {file}{file}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26155 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26156 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26158 \begin{Details} \relax ! Undefined control sequence. l.26159 If \code {text} has length greater than zero (after coercion) it is u... ! Undefined control sequence. l.26160 preference to \code {file}. ! Undefined control sequence. l.26162 All versions of \R {} accept input from a connection with end of line ! Undefined control sequence. l.26167 ... input is taken from the console, \code {n = NULL} is equivalent to ! Undefined control sequence. l.26168 \code {n = 1}, and \code{n < 0} will read until an EOF character is ! Undefined control sequence. l.26168 \code{n = 1}, and \code {n < 0} will read until an EOF character is [255] [2]] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc ! Undefined control sequence. l.26173 The default for \code {srcfile} is set as follows. If ! Undefined control sequence. l.26174 \code {keep.source} is not \code{TRUE}, \code{srcfile} ! Undefined control sequence. l.26174 \code{keep.source} is not \code {TRUE}, \code{srcfile} ! Undefined control sequence. l.26174 ...{keep.source} is not \code{TRUE}, \code {srcfile} ! Undefined control sequence. l.26175 ...lts to a character string, either \code {""} or one ! Undefined control sequence. l.26176 derived from \code {file}. When \code{keep.source} is ! Undefined control sequence. l.26176 derived from \code{file}. When \code {keep.source} is ! Undefined control sequence. l.26177 \code {TRUE}, if \code{text} is used, \code{srcfile} will be set to a ! Undefined control sequence. l.26177 \code{TRUE}, if \code {text} is used, \code{srcfile} will be set to a ! Undefined control sequence. l.26177 \code{TRUE}, if \code{text} is used, \code {srcfile} will be set to a ! Undefined control sequence. l.26178 \code {\LinkA{srcfilecopy}{srcfilecopy}} containing the text. If a c... ! Undefined control sequence. l.26178 \code{\LinkA {srcfilecopy}{srcfilecopy}} containing the text. If a c... ! Undefined control sequence. l.26179 string is used for \code {file}, a \code{\LinkA{srcfile}{srcfile}} ob... ! Undefined control sequence. l.26179 string is used for \code{file}, a \code {\LinkA{srcfile}{srcfile}} ob... ! Undefined control sequence. l.26179 ...is used for \code{file}, a \code{\LinkA {srcfile}{srcfile}} object ! Undefined control sequence. l.26182 When \code {srcfile} is a character string, error messages will ! Undefined control sequence. l.26184 to the result. When \code {srcfile} is a \code{\LinkA{srcfile}{srcfi... ! Undefined control sequence. l.26184 ...result. When \code{srcfile} is a \code {\LinkA{srcfile}{srcfile}} ! Undefined control sequence. l.26184 ... When \code{srcfile} is a \code{\LinkA {srcfile}{srcfile}} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26186 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26188 \begin{Value} ! Undefined control sequence. l.26189 An object of type \code {"\LinkA{expression}{expression}"}, with up t... ! Undefined control sequence. l.26189 An object of type \code{"\LinkA {expression}{expression}"}, with up t... ! Undefined control sequence. l.26189 ...ession}{expression}"}, with up to \code {n} ! Undefined control sequence. l.26192 When \code {srcfile} is non-\code{NULL}, a \code{"srcref"} attribute ! Undefined control sequence. l.26192 When \code{srcfile} is non-\code {NULL}, a \code{"srcref"} attribute ! Undefined control sequence. l.26192 ...de{srcfile} is non-\code{NULL}, a \code {"srcref"} attribute ! Undefined control sequence. l.26194 \code {\LinkA{srcref}{srcref}} records corresponding to each element, a ! Undefined control sequence. l.26194 \code{\LinkA {srcref}{srcref}} records corresponding to each element, a ! Undefined control sequence. l.26195 \code {"srcfile"} attribute will be attached containing a copy of ! Undefined control sequence. l.26196 \code {srcfile}, and a \code{"wholeSrcref"} attribute will be ! Undefined control sequence. l.26196 \code{srcfile}, and a \code {"wholeSrcref"} attribute will be ! Undefined control sequence. l.26197 attached containing a \code {\LinkA{srcref}{srcref}} record correspon... ! Undefined control sequence. l.26197 attached containing a \code{\LinkA {srcref}{srcref}} record correspon... ! Undefined control sequence. l.26199 the \code {"srcfile"} attribute, to be retrieved by ! Undefined control sequence. l.26200 \code {\LinkA{getParseData}{getParseData}}. ! Undefined control sequence. l.26200 \code{\LinkA {getParseData}{getParseData}}. ! Undefined control sequence. l.26205 \code {encoding} is \code{"latin1"} or \code{"UTF-8"}, or if ! Undefined control sequence. l.26205 \code{encoding} is \code {"latin1"} or \code{"UTF-8"}, or if ! Undefined control sequence. l.26205 ...e{encoding} is \code{"latin1"} or \code {"UTF-8"}, or if ! Undefined control sequence. l.26206 \code {text} is supplied with every element of known encoding in a ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26208 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26210 \begin{Section} {Partial parsing} ! Undefined control sequence. l.26211 ...ntax error occurs during parsing, \code {parse} ! Undefined control sequence. l.26213 \code {srcfile} argument if it is a \code{\LinkA{srcfile}{srcfile}} o... ! Undefined control sequence. l.26213 \code{srcfile} argument if it is a \code {\LinkA{srcfile}{srcfile}} o... ! Undefined control sequence. l.26213 ...cfile} argument if it is a \code{\LinkA {srcfile}{srcfile}} object ! Undefined control sequence. l.26214 and the \code {text} argument was used to supply the text. In other ! Undefined control sequence. l.26218 \code {\LinkA{getParseData}{getParseData}} applied to the \code{srcfi... ! Undefined control sequence. l.26218 \code{\LinkA {getParseData}{getParseData}} applied to the \code{srcfi... ! Undefined control sequence. l.26218 ...ta}{getParseData}} applied to the \code {srcfile} object. ! Undefined control sequence. l.26220 to \code {"parent"} entries that are not present. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26221 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26223 \begin{References} \relax ! Undefined control sequence. l.26229 \Rhref {https://journal.r-project.org/archive/2010-2/RJournal_2010-2_... ! Missing $ inserted. $ l.26229 ....r-project.org/archive/2010-2/RJournal_ 2010-2_Murdoch.pdf}{Source ! Extra }, or forgotten $. l.26229 ...ive/2010-2/RJournal_2010-2_Murdoch.pdf} {Source ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26231 \end{References} ! Missing $ inserted. $ l.26231 \end{References} ! Missing } inserted. } l.26231 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26233 \begin{SeeAlso} \relax ! Undefined control sequence. l.26234 \code {\LinkA{scan}{scan}}, \code{\LinkA{source}{source}}, \code{\Lin... ! Undefined control sequence. l.26234 \code{\LinkA {scan}{scan}}, \code{\LinkA{source}{source}}, \code{\Lin... ! Undefined control sequence. l.26234 \code{\LinkA{scan}{scan}}, \code {\LinkA{source}{source}}, \code{\Lin... ! Undefined control sequence. l.26234 \code{\LinkA{scan}{scan}}, \code{\LinkA {source}{source}}, \code{\Lin... ! Undefined control sequence. l.26234 ...}, \code{\LinkA{source}{source}}, \code {\LinkA{eval}{eval}}, ! Undefined control sequence. l.26234 ...e{\LinkA{source}{source}}, \code{\LinkA {eval}{eval}}, ! Undefined control sequence. l.26235 \code {\LinkA{deparse}{deparse}}. ! Undefined control sequence. l.26235 \code{\LinkA {deparse}{deparse}}. Underfull \hbox (badness 10000) in paragraph at lines 26228--26236 []\OT1/cmr/m/n/10 Murdoch, D. (2010). https://journal.r-project.org/archive/201 0- ! Undefined control sequence. l.26238 e.g.~\code {\LinkA{setBreakpoint}{setBreakpoint}}) and profiling (see ! Undefined control sequence. l.26238 e.g.~\code{\LinkA {setBreakpoint}{setBreakpoint}}) and profiling (see ! Undefined control sequence. l.26239 \code {\LinkA{Rprof}{Rprof}}). It can be examined by \code{\LinkA{get... ! Undefined control sequence. l.26239 \code{\LinkA {Rprof}{Rprof}}). It can be examined by \code{\LinkA{get... ! Undefined control sequence. l.26239 ...}{Rprof}}). It can be examined by \code {\LinkA{getSrcref}{getSrcr... ! Undefined control sequence. l.26239 ...}}). It can be examined by \code{\LinkA {getSrcref}{getSrcref}} ! Undefined control sequence. l.26241 \code {\LinkA{getParseData}{getParseData}}. ! Undefined control sequence. l.26241 \code{\LinkA {getParseData}{getParseData}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26242 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26244 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26245 \begin{ExampleCode} ! Undefined control sequence. l.26246 cat("x <- c(1, 4)\n x ^ 3 -10 ; outer(1:7, 5:9)\n", file = "xyz.Rdm... ! Missing $ inserted. $ l.26246 cat("x <- c(1, 4)\n x ^ 3 -10 ; outer(1:7, 5:9)\n", file = "xyz.Rdm... ! Undefined control sequence. l.26246 ...(1, 4)\n x ^ 3 -10 ; outer(1:7, 5:9)\n ", file = "xyz.Rdmped") ! You can't use `macro parameter character #' in math mode. l.26247 # parse 3 statements from the file "xyz.Rdmped" ! Missing $ inserted. $ l.26250 Underfull \hbox (badness 3271) in paragraph at lines 26237--26250 []\OT1/cmr/m/n/10 The source ref-er-ence in-for-ma-tion can be used for de-bug- ging (see Underfull \hbox (badness 5189) in paragraph at lines 26237--26250 \OT1/cmr/m/n/10 e.g. set-Break-pointset-Break-point) and pro-fil-ing (see Rprof R-prof). It Underfull \hbox (badness 2932) in paragraph at lines 26237--26250 \OT1/cmr/m/n/10 can be ex-am-ined by get-Sr-cre-fget-Sr-cref and re-lated func- tions. More Underfull \hbox (badness 10000) in paragraph at lines 26237--26250 \OT1/cmr/m/n/10 de-tailed in-for-ma-tion is avail-able through get-Parse-Datage t-Parse- Underfull \hbox (badness 10000) in paragraph at lines 26237--26250 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 xyz:Rdmped\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 parse\OT1/cmr/m/n/10 3\OML/cmm/m/it/10 statementsfromthefile\OT1/cmr/m/n/10 "\O ML/cmm/m/it/10 xyz:Rdmped\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 parse\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 file \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.26251 # A partial parse with a syntax error ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26259 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26260 \end{Examples} ! Undefined control sequence. l.26261 \HeaderA {paste}{Concatenate Strings}{paste} ! Undefined control sequence. l.26262 \aliasA {paste0}{paste}{paste0} ! Undefined control sequence. l.26263 \keyword {character}{paste} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26265 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26267 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26269 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26274 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26276 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26277 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26278 \item[\code{...}] one or more \R{} objects, to be converted to chara... ! Undefined control sequence. l.26278 \item[\code{...}] one or more \R {} objects, to be converted to chara... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26279 \item[\code{sep}] a character string to separate the terms. Not ! Undefined control sequence. l.26280 \code {\LinkA{NA\_character\_}{NA.Rul.character.Rul.}}. ! Undefined control sequence. l.26280 \code{\LinkA {NA\_character\_}{NA.Rul.character.Rul.}}. Underfull \hbox (badness 10000) in paragraph at lines 26279--26281 []\OT1/cmr/m/n/10 a char-ac-ter string to sep-a-rate the terms. Not [256] [-1 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26281 \item[\code{collapse}] an optional character string to separate the ... ! Undefined control sequence. l.26282 \code {\LinkA{NA\_character\_}{NA.Rul.character.Rul.}}. ! Undefined control sequence. l.26282 \code{\LinkA {NA\_character\_}{NA.Rul.character.Rul.}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26283 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26284 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26286 \begin{Details} \relax ! Undefined control sequence. l.26287 \code {paste} converts its arguments (\emph{via} ! Undefined control sequence. l.26288 \code {\LinkA{as.character}{as.character}}) to character strings, and... ! Undefined control sequence. l.26288 \code{\LinkA {as.character}{as.character}}) to character strings, and... ! Undefined control sequence. l.26289 ...ating them by the string given by \code {sep}). If the ! Undefined control sequence. l.26292 ...ength arguments being recycled to \code {""}. Underfull \hbox (badness 10000) in paragraph at lines 26281--26293 []\OT1/cmr/m/n/10 an op-tional char-ac-ter string to sep-a-rate the re-sults. N ot Underfull \hbox (badness 1048) in paragraph at lines 26281--26293 \OT1/cmr/m/n/10 NA[]character[]NA.Rul.character.Rul.. paste con-verts its ar- gu-ments ! Undefined control sequence. l.26294 Note that \code {paste()} coerces \code{\LinkA{NA\_character\_}{NA.Ru... ! Undefined control sequence. l.26294 Note that \code{paste()} coerces \code {\LinkA{NA\_character\_}{NA.Ru... ! Undefined control sequence. l.26294 ...hat \code{paste()} coerces \code{\LinkA {NA\_character\_}{NA.Rul.c... ! Undefined control sequence. l.26295 character missing value, to \code {"NA"} which may seem ! Undefined control sequence. l.26297 desirable, e.g.~in \code {paste("the value of p is ", p)}. ! Undefined control sequence. l.26299 \code {paste0(..., collapse)} is equivalent to ! Undefined control sequence. l.26300 \code {paste(..., sep = "", collapse)}, slightly more efficiently. ! Undefined control sequence. l.26302 If a value is specified for \code {collapse}, the values in the result ! Undefined control sequence. l.26304 separated by the value of \code {collapse}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26305 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26307 \begin{Value} ! Undefined control sequence. l.26309 zero if all the objects are, unless \code {collapse} is non-NULL in ! Undefined control sequence. l.26313 declared with encoding \code {"bytes"}, (see \code{\LinkA{Encoding}{E... ! Undefined control sequence. l.26313 ...ith encoding \code{"bytes"}, (see \code {\LinkA{Encoding}{Encoding... ! Undefined control sequence. l.26313 ...oding \code{"bytes"}, (see \code{\LinkA {Encoding}{Encoding}}), ! Undefined control sequence. l.26320 ...element is declared with encoding \code {"bytes"}, ! Undefined control sequence. l.26322 element will have encoding \code {"bytes"}. If \code{collapse} is ! Undefined control sequence. l.26322 ...have encoding \code{"bytes"}. If \code {collapse} is ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26326 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26328 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26332 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26334 \begin{SeeAlso} \relax ! Undefined control sequence. l.26335 \code {\LinkA{toString}{toString}} typically calls \code{paste(*, col... ! Undefined control sequence. l.26335 \code{\LinkA {toString}{toString}} typically calls \code{paste(*, col... ! Undefined control sequence. l.26335 ...tring}{toString}} typically calls \code {paste(*, collapse=", ")}. ! Undefined control sequence. l.26337 \code {\LinkA{as.character}{as.character}}, \code{\LinkA{substr}{subs... ! Undefined control sequence. l.26337 \code{\LinkA {as.character}{as.character}}, \code{\LinkA{substr}{subs... ! Undefined control sequence. l.26337 ...nkA{as.character}{as.character}}, \code {\LinkA{substr}{substr}}, ... ! Undefined control sequence. l.26337 ...character}{as.character}}, \code{\LinkA {substr}{substr}}, \code{\... ! Undefined control sequence. l.26337 ...}, \code{\LinkA{substr}{substr}}, \code {\LinkA{nchar}{nchar}}, ! Undefined control sequence. l.26337 ...e{\LinkA{substr}{substr}}, \code{\LinkA {nchar}{nchar}}, ! Undefined control sequence. l.26338 \code {\LinkA{strsplit}{strsplit}}; further, \code{\LinkA{cat}{cat}} ... ! Undefined control sequence. l.26338 \code{\LinkA {strsplit}{strsplit}}; further, \code{\LinkA{cat}{cat}} ... ! Undefined control sequence. l.26338 ...kA{strsplit}{strsplit}}; further, \code {\LinkA{cat}{cat}} which c... ! Undefined control sequence. l.26338 ...plit}{strsplit}}; further, \code{\LinkA {cat}{cat}} which concaten... ! Undefined control sequence. l.26339 writes to a file, and \code {\LinkA{sprintf}{sprintf}} for C like string ! Undefined control sequence. l.26339 writes to a file, and \code{\LinkA {sprintf}{sprintf}} for C like string ! Undefined control sequence. l.26342 `\LinkA {plotmath}{plotmath}' for the use of \code{paste} in plot ann... ! Undefined control sequence. l.26342 ...otmath}{plotmath}' for the use of \code {paste} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26343 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26345 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26346 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26347 # # When passing a single vector, paste0 and paste work like as.chara... ! You can't use `macro parameter character #' in horizontal mode. l.26347 ## When passing a single vector, paste0 and paste work like as.chara... ! You can't use `macro parameter character #' in horizontal mode. l.26349 paste(1:12) # same ! You can't use `macro parameter character #' in horizontal mode. l.26350 as.character(1:12) # same ! You can't use `macro parameter character #' in vertical mode. l.26352 # # If you pass several vectors to paste0, they are concatenated in a ! You can't use `macro parameter character #' in vertical mode. l.26352 ## If you pass several vectors to paste0, they are concatenated in a ! You can't use `macro parameter character #' in horizontal mode. l.26353 # # vectorized way. ! You can't use `macro parameter character #' in horizontal mode. l.26353 ## vectorized way. ! You can't use `macro parameter character #' in vertical mode. l.26356 # # paste works the same, but separates each input with a space. ! You can't use `macro parameter character #' in vertical mode. l.26356 ## paste works the same, but separates each input with a space. ! You can't use `macro parameter character #' in horizontal mode. l.26357 # # Notice that the recycling rules make every input as long as the l... ! You can't use `macro parameter character #' in horizontal mode. l.26357 ## Notice that the recycling rules make every input as long as the l... ! You can't use `macro parameter character #' in vertical mode. l.26361 # # You can change the separator by passing a sep argument ! You can't use `macro parameter character #' in vertical mode. l.26361 ## You can change the separator by passing a sep argument ! You can't use `macro parameter character #' in horizontal mode. l.26362 # # which can be multiple characters. ! You can't use `macro parameter character #' in horizontal mode. l.26362 ## which can be multiple characters. ! Missing $ inserted. $ l.26363 ...e", nth, "month of the year.", sep = "_ *_") ! Double subscript. l.26363 ..., nth, "month of the year.", sep = "_*_ ") ! Missing $ inserted. $ l.26364 ! You can't use `macro parameter character #' in vertical mode. l.26365 # # To collapse the output into a single string, pass a collapse argu... ! You can't use `macro parameter character #' in vertical mode. l.26365 ## To collapse the output into a single string, pass a collapse argu... ! You can't use `macro parameter character #' in vertical mode. l.26368 # # For inputs of length 1, use the sep argument rather than collapse ! You can't use `macro parameter character #' in vertical mode. l.26368 ## For inputs of length 1, use the sep argument rather than collapse ! You can't use `macro parameter character #' in horizontal mode. l.26369 ..."1st", "2nd", "3rd", collapse = ", ") # probably not what you wanted ! You can't use `macro parameter character #' in vertical mode. l.26372 # # You can combine the sep and collapse arguments together. ! You can't use `macro parameter character #' in vertical mode. l.26372 ## You can combine the sep and collapse arguments together. [257]] ! You can't use `macro parameter character #' in vertical mode. l.26375 # # Using paste() in combination with strwrap() can be useful ! You can't use `macro parameter character #' in vertical mode. l.26375 ## Using paste() in combination with strwrap() can be useful ! You can't use `macro parameter character #' in horizontal mode. l.26376 # # for dealing with long strings. ! You can't use `macro parameter character #' in horizontal mode. l.26376 ## for dealing with long strings. ! Undefined control sequence. l.26379 width = 30), collapse = "\n ")) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26381 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26382 \end{Examples} ! Undefined control sequence. l.26383 \HeaderA {path.expand}{Expand File Paths}{path.expand} ! Undefined control sequence. l.26384 \aliasA {tilde expansion}{path.expand}{tilde expansion} ! Undefined control sequence. l.26385 \keyword {file}{path.expand} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26387 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26390 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26392 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26396 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26398 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26399 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26400 \item[\code{path}] character vector containing one or more path names. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26401 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26402 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26404 \begin{Details} \relax ! Undefined control sequence. l.26407 On most builds of \R {} a leading \code{\textasciitilde{}user} will e... ! Undefined control sequence. l.26407 On most builds of \R{} a leading \code {\textasciitilde{}user} will e... ! Undefined control sequence. l.26408 directory of \code {user}, but not on builds without \code{readline} ! Undefined control sequence. l.26408 ...{user}, but not on builds without \code {readline} ! Undefined control sequence. l.26409 ...lled. (In an interactive session \code {capabilities("cledit")} ! Undefined control sequence. l.26410 will report if \code {readline} is available.) ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26414 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26416 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26419 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26421 \begin{SeeAlso} \relax ! Undefined control sequence. l.26422 \code {\LinkA{basename}{basename}}, \code{\LinkA{normalizePath}{norma... ! Undefined control sequence. l.26422 \code{\LinkA {basename}{basename}}, \code{\LinkA{normalizePath}{norma... ! Undefined control sequence. l.26422 \code{\LinkA{basename}{basename}}, \code {\LinkA{normalizePath}{norma... ! Undefined control sequence. l.26422 ...inkA{basename}{basename}}, \code{\LinkA {normalizePath}{normalizeP... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26423 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26425 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26426 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26428 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26429 \end{Examples} ! Undefined control sequence. l.26430 \HeaderA {pcre\_config}{Report Configuration Options for PCRE}{pcre.R... ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26432 \begin{Description} \relax ! Undefined control sequence. l.26434 in this \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26435 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26437 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26441 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26443 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26445 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26446 \item[\code{UTF-8}] Support for UTF-8 inputs. Required. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26447 \item[\code{Unicode properties}] Support for \samp{\bsl{}p\{xx\}} an... ! Undefined control sequence. l.26447 ...{Unicode properties}] Support for \samp {\bsl{}p\{xx\}} and \samp{... ! Undefined control sequence. l.26447 ...ode properties}] Support for \samp{\bsl {}p\{xx\}} and \samp{\bsl{... ! Undefined control sequence. l.26447 ...port for \samp{\bsl{}p\{xx\}} and \samp {\bsl{}P\{xx\}} ! Undefined control sequence. l.26447 ...for \samp{\bsl{}p\{xx\}} and \samp{\bsl {}P\{xx\}} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26449 \item[\code{JIT}] Support for just-in-time compilation. Desirable f... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26452 \item[\code{stack}] Does match recursion use a stack (\code{TRUE}, t... ! Undefined control sequence. l.26452 ...Does match recursion use a stack (\code {TRUE}, the PCRE ! Undefined control sequence. l.26454 \url {http://www.pcre.org/original/doc/html/pcrestack.html}. (Added ! Undefined control sequence. l.26455 in \R {} 3.4.0.) ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26456 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26457 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26459 \begin{SeeAlso} \relax ! Undefined control sequence. l.26460 \code {\LinkA{extSoftVersion}{extSoftVersion}} for the PCRE version. ! Undefined control sequence. l.26460 \code{\LinkA {extSoftVersion}{extSoftVersion}} for the PCRE version. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26461 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26463 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26464 \begin{ExampleCode} ! Missing $ inserted. $ l.26465 pcre_ config() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26466 \end{ExampleCode} ! Missing $ inserted. $ l.26466 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26467 \end{Examples} ! Undefined control sequence. l.26468 \HeaderA {pmatch}{Partial String Matching}{pmatch} ! Undefined control sequence. l.26469 \keyword {character}{pmatch} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26471 \begin{Description} \relax ! Undefined control sequence. l.26472 \code {pmatch} seeks matches for the elements of its first argument ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26474 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26476 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26480 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26482 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26483 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26484 \item[\code{x}] the values to be matched: converted to a character v... ! Undefined control sequence. l.26485 \code {\LinkA{as.character}{as.character}}. \LinkA{Long vectors}{Lon... ! Undefined control sequence. l.26485 \code{\LinkA {as.character}{as.character}}. \LinkA{Long vectors}{Lon... ! Undefined control sequence. l.26485 ...A{as.character}{as.character}}. \LinkA {Long vectors}{Long vector... Underfull \hbox (badness 7649) in paragraph at lines 26484--26486 []\OT1/cmr/m/n/10 the val-ues to be matched: con-verted to a char-ac-ter vec-to r by ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26486 \item[\code{table}] the values to be matched against: converted to a... ! Undefined control sequence. l.26487 vector. \LinkA {Long vectors}{Long vectors} are not supported. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26488 \item[\code{nomatch}] the value to be returned at non-matching or mu... ! Undefined control sequence. l.26489 ...ions. Note that it is coerced to \code {integer}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26490 \item[\code{duplicates.ok}] shoul [-2d elements be in \code{table} be us... ! Undefined control sequence. l.26490 ...icates.ok}] should elements be in \code {table} be used more ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26492 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26493 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26495 \begin{Details} \relax ! Undefined control sequence. l.26496 ...behaviour differs by the value of \code {duplicates.ok}. Consider ! Undefined control sequence. l.26500 ...rs if the whole of the element of \code {x} matches the ! Undefined control sequence. l.26501 beginning of the element of \code {table}.) Finally, ! Undefined control sequence. l.26502 all remaining elements of \code {x} are regarded as unmatched. [258] ! Undefined control sequence. l.26507 If \code {duplicates.ok} is \code{FALSE}, values of \code{table} once ! Undefined control sequence. l.26507 If \code{duplicates.ok} is \code {FALSE}, values of \code{table} once ! Undefined control sequence. l.26507 ...es.ok} is \code{FALSE}, values of \code {table} once ! Undefined control sequence. l.26509 behaviour is equivalent to the \R {} algorithm for argument ! Undefined control sequence. l.26514 \code {\LinkA{charmatch}{charmatch}} is similar to \code{pmatch} with ! Undefined control sequence. l.26514 \code{\LinkA {charmatch}{charmatch}} is similar to \code{pmatch} with ! Undefined control sequence. l.26514 ...rmatch}{charmatch}} is similar to \code {pmatch} with ! Undefined control sequence. l.26515 \code {duplicates.ok} true, the differences being that it ! Undefined control sequence. l.26519 \code {NA} values are treated as if they were the string constant ! Undefined control sequence. l.26520 \code {"NA"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26521 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26523 \begin{Value} ! Undefined control sequence. l.26524 ...nteger vector (possibly including \code {NA} if \code{nomatch = ! Undefined control sequence. l.26524 ... (possibly including \code{NA} if \code {nomatch = ! Undefined control sequence. l.26525 NA}) of the same length as \code {x}, giving the indices of the ! Undefined control sequence. l.26526 elements in \code {table} which matched, or \code{nomatch}. ! Undefined control sequence. l.26526 ...in \code{table} which matched, or \code {nomatch}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26527 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26529 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26537 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26539 \begin{SeeAlso} \relax ! Undefined control sequence. l.26540 \code {\LinkA{match}{match}}, \code{\LinkA{charmatch}{charmatch}} and ! Undefined control sequence. l.26540 \code{\LinkA {match}{match}}, \code{\LinkA{charmatch}{charmatch}} and ! Undefined control sequence. l.26540 \code{\LinkA{match}{match}}, \code {\LinkA{charmatch}{charmatch}} and ! Undefined control sequence. l.26540 \code{\LinkA{match}{match}}, \code{\LinkA {charmatch}{charmatch}} and ! Undefined control sequence. l.26541 \code {\LinkA{match.arg}{match.arg}}, \code{\LinkA{match.fun}{match.f... ! Undefined control sequence. l.26541 \code{\LinkA {match.arg}{match.arg}}, \code{\LinkA{match.fun}{match.f... ! Undefined control sequence. l.26541 \code{\LinkA{match.arg}{match.arg}}, \code {\LinkA{match.fun}{match.f... ! Undefined control sequence. l.26541 ...kA{match.arg}{match.arg}}, \code{\LinkA {match.fun}{match.fun}}, ! Undefined control sequence. l.26542 \code {\LinkA{match.call}{match.call}}, for function argument matchin... ! Undefined control sequence. l.26542 \code{\LinkA {match.call}{match.call}}, for function argument matchin... ! Undefined control sequence. l.26543 \code {\LinkA{startsWith}{startsWith}} for particular checking of ini... ! Undefined control sequence. l.26543 \code{\LinkA {startsWith}{startsWith}} for particular checking of ini... ! Undefined control sequence. l.26544 \code {\LinkA{grep}{grep}} etc for more general (regexp) matching of ... ! Undefined control sequence. l.26544 \code{\LinkA {grep}{grep}} etc for more general (regexp) matching of ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26545 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26547 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26548 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26549 ...h("", "") # returns NA ! You can't use `macro parameter character #' in horizontal mode. l.26550 ...h("m", c("mean", "median", "mode")) # returns NA ! You can't use `macro parameter character #' in horizontal mode. l.26551 ...h("med", c("mean", "median", "mode")) # returns 2 ! You can't use `macro parameter character #' in horizontal mode. l.26555 # # compare ! You can't use `macro parameter character #' in horizontal mode. l.26555 ## compare ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26557 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26558 \end{Examples} ! Undefined control sequence. l.26559 \HeaderA {polyroot}{Find Zeros of a Real or Complex Polynomial}{polyr... ! Undefined control sequence. l.26560 \keyword {math}{polyroot} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for] explanation. Type H for immediate help. ... l.26562 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26564 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26566 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26570 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26572 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26573 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26574 \item[\code{z}] the vector of polynomial coefficients in increasing ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26575 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26576 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26578 \begin{Details} \relax ! Undefined control sequence. l.26579 A polynomial of degree \eqn {n - 1}{}, ! Undefined control sequence. l.26580 \deqn { ! Missing $ inserted. $ l.26581 p(x) = z_ 1 + z_2 x + \cdots + z_n x^{n-1}}{} ! Extra }, or forgotten $. l.26581 ...) = z_1 + z_2 x + \cdots + z_n x^{n-1}} {} ! Undefined control sequence. l.26582 is given by its coefficient vector \code {z[1:n]}. ! Undefined control sequence. l.26583 \code {polyroot} returns the \eqn{n-1}{} complex zeros of \eqn{p(x)}{} ! Undefined control sequence. l.26583 \code{polyroot} returns the \eqn {n-1}{} complex zeros of \eqn{p(x)}{} ! Undefined control sequence. l.26583 ...s the \eqn{n-1}{} complex zeros of \eqn {p(x)}{} ! Missing $ inserted. $ l.26585 Underfull \hbox (badness 2617) in paragraph at lines 26574--26585 []\OT1/cmr/m/n/10 the vec-tor of poly-no-mial co-ef-fi-cients in in-creas-ing o r-der. A Underfull \hbox (badness 10000) in paragraph at lines 26574--26585 \OT1/cmr/m/n/10 poly-no-mial of de-gree n - 1, p(x) = z$[] + \OML/cmm/m/it/10 z[]x \OT1/cmr/m/n/10 + [] + Overfull \hbox (133.31483pt too wide) in paragraph at lines 26574--26585 \OML/cmm/m/it/10 z[]x[][]isgivenbyitscoefficientvector[]:[]returnsthe[][]comple xzerosof[][]usingtheJenkins \OMS/cmsy/m/n/10 ^^@ ! Undefined control sequence. l.26586 If the coefficient vector \code {z} has zeroes for the highest powers, ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26591 \end{Details} ! Missing } inserted. } l.26591 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26593 \begin{Value} ! Undefined control sequence. l.26594 A complex vector of length \eqn {n - 1}{}, where \eqn{n}{} is the pos... ! Undefined control sequence. l.26594 ...tor of length \eqn{n - 1}{}, where \eqn {n}{} is the position ! Undefined control sequence. l.26595 of the largest non-zero element of \code {z}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26596 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26598 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26601 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26603 \begin{References} \relax ! Undefined control sequence. l.26606 \emph{Comm. ACM}, \bold {15}, 97--99. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26607 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26609 \begin{SeeAlso} \relax ! Undefined control sequence. l.26610 \code {\LinkA{uniroot}{uniroot}} for numerical root finding of arbitrary ! Undefined control sequence. l.26610 \code{\LinkA {uniroot}{uniroot}} for numerical root finding of arbitrary ! Undefined control sequence. l.26612 \code {\LinkA{complex}{complex}} and the \code{zero} example in the d... ! Undefined control sequence. l.26612 \code{\LinkA {complex}{complex}} and the \code{zero} example in the d... ! Undefined control sequence. l.26612 ...\LinkA{complex}{complex}} and the \code {zero} example in the demos ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26614 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26616 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26617 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26619 round(polyroot(choose(8, 0:8)), 11) # guess what! ! You can't use `macro parameter character #' in horizontal mode. l.26621 polyroot(c(1, 2, 1, 0, 0)) # same as the first ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26622 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26623 \end{Examples} ! Undefined control sequence. l.26624 \HeaderA {pos.to.env}{Convert Positions in the Search Path to Environ... ! Undefined control sequence. l.26625 \keyword {utilities}{pos.to.env} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26627 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26629 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26631 \begin{Usage} [259] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26635 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26637 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26638 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26639 \item[\code{x}] an integer between \code{1} and \code{length(search(... ! Undefined control sequence. l.26639 \item[\code{x}] an integer between \code {1} and \code{length(search(... ! Undefined control sequence. l.26639 ...] an integer between \code{1} and \code {length(search())}, the le... ! Undefined control sequence. l.26640 of the search path, or \code {-1}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26641 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26642 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26644 \begin{Details} \relax ! Undefined control sequence. l.26645 Several \R {} functions for manipulating objects in environments (suc... ! Undefined control sequence. l.26646 \code {\LinkA{get}{get}} and \code{\LinkA{ls}{ls}}) allow specifying ... ! Undefined control sequence. l.26646 \code{\LinkA {get}{get}} and \code{\LinkA{ls}{ls}}) allow specifying ... ! Undefined control sequence. l.26646 \code{\LinkA{get}{get}} and \code {\LinkA{ls}{ls}}) allow specifying ... ! Undefined control sequence. l.26646 \code{\LinkA{get}{get}} and \code{\LinkA {ls}{ls}}) allow specifying ... ! Undefined control sequence. l.26647 ...ng positions in the search path. \code {pos.to.env} is ! Undefined control sequence. l.26650 it. It is \LinkA {primitive}{primitive}. ! Undefined control sequence. l.26652 \code {-1} is interpreted as the environment the function is called ! Undefined control sequence. l.26655 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26656 \end{Details} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26658 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26659 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26660 pos.to.env(1) # R_GlobalEnv ! Missing $ inserted. $ l.26660 pos.to.env(1) # R_ GlobalEnv ! You can't use `macro parameter character #' in math mode. l.26661 # the next returns the base environment ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26663 \end{ExampleCode} ! Missing $ inserted. $ l.26663 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26664 \end{Examples} ! Undefined control sequence. l.26665 \HeaderA {pretty}{Pretty Breakpoints}{pretty} ! Undefined control sequence. l.26666 \methaliasA {pretty.default}{pretty}{pretty.default} ! Undefined control sequence. l.26667 \keyword {dplot}{pretty} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26669 \begin{Description} \relax ! Undefined control sequence. l.26670 Compute a sequence of about \code {n+1} equally spaced `round' ! Undefined control sequence. l.26671 ... cover the range of the values in \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26673 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26675 \begin{Usage} Underfull \hbox (badness 4254) in paragraph at lines 26655--26676 []\OT1/cmr/m/n/10 This is a prim-i-tiveprim-i-tive func-tion. pos.to.env(1) Underfull \hbox (badness 10000) in paragraph at lines 26655--26676 \OT1/cmr/m/n/10 R$[]\OML/cmm/m/it/10 lobalEnvthenextreturnsthebaseenvironmentpo s:to:env\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 length\OT1/cmr/m/n/10 (\OML/cmm/m/it/ 10 search\OT1/cmr/m/n/10 ()))$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26684 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [-3 l.26686 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26687 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26688 \item[\code{x}] an object coercible to numeric by \code{\LinkA{as.nu... ! Undefined control sequence. l.26688 ...an object coercible to numeric by \code {\LinkA{as.numeric}{as.num... ! Undefined control sequence. l.26688 ...ct coercible to numeric by \code{\LinkA {as.numeric}{as.numeric}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26689 \item[\code{n}] integer giving the \emph{desired} number of ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26691 \item[\code{min.n}] nonnegative integer giving the \emph{minimal} nu... ! Undefined control sequence. l.26692 intervals. If \code {min.n == 0}, \code{pretty(.)} may return a ! Undefined control sequence. l.26692 intervals. If \code{min.n == 0}, \code {pretty(.)} may return a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26694 \item[\code{shrink.sml}] positive numeric ! Undefined control sequence. l.26696 \code {range(x)} is very small (usually 0). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26697 \item[\code{high.u.bias}] non-negative numeric, typically \eqn{> 1}{}. ! Undefined control sequence. l.26697 ...}] non-negative numeric, typically \eqn {> 1}{}. ! Undefined control sequence. l.26698 ... determined as \{1,2,5,10\} times \code {b}, a ! Undefined control sequence. l.26699 power of 10. Larger \code {high.u.bias} values favor larger units. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26700 \item[\code{u5.bias}] non-negative numeric ! Undefined control sequence. l.26702 \code {u5.bias = .5 + 1.5*high.u.bias}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26703 \item[\code{eps.correct}] integer code, one of \{0,1,2\}. If non-0, an ! Undefined control sequence. l.26705 ...result boundaries will be outside \code {range(x)}; in the ! Undefined control sequence. l.26706 ...e, the correction is only done if \code {eps.correct ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26708 \item[\code{...}] further arguments for methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26709 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26710 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26712 \begin{Details} \relax ! Undefined control sequence. l.26713 \code {pretty} ignores non-finite values in \code{x}. ! Undefined control sequence. l.26713 ...tty} ignores non-finite values in \code {x}. ! Undefined control sequence. l.26715 Let \code {d <- max(x) - min(x)} \eqn{\ge 0}{}. ! Undefined control sequence. l.26715 Let \code{d <- max(x) - min(x)} \eqn {\ge 0}{}. ! Missing $ inserted. $ l.26715 Let \code{d <- max(x) - min(x)} \eqn{\ge 0}{}. ! Extra }, or forgotten $. l.26715 ...\code{d <- max(x) - min(x)} \eqn{\ge 0} {}. ! Undefined control sequence. l.26716 If \code {d} is not (very close) to 0, we let \code{c <- d/n}, ! Undefined control sequence. l.26716 ... is not (very close) to 0, we let \code {c <- d/n}, ! Undefined control sequence. l.26717 otherwise more or less \code {c <- max(abs(range(x)))*shrink.sml / mi... ! Undefined control sequence. l.26718 Then, the \emph{10 base} \code {b} is ! Undefined control sequence. l.26719 \eqn {10^{\lfloor{\log_{10}(c)}\rfloor}}{} such ! Undefined control sequence. l.26720 that \eqn {b \le c < 10b}{}. ! Missing $ inserted. $ l.26721 Overfull \hbox (493.24025pt too wide) in paragraph at lines 26715--26721 []\OT1/cmr/m/n/10 Let d <- max(x) - min(x) $\OMS/cmsy/m/n/10 ^^U \OT1/cmr/m/n/1 0 0[]\OML/cmm/m/it/10 :Ifdisnot\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 veryclose\OT1/ cmr/m/n/10 )\OML/cmm/m/it/10 to\OT1/cmr/m/n/10 0\OML/cmm/m/it/10 ; welet[]; oth erwisemoreorless[]:Then; the[]bis[][]suchthat[][]:$ ! Undefined control sequence. l.26722 Now determine the basic \emph{unit} \eqn {u}{} as one of ! Undefined control sequence. l.26723 \eqn {\{1,2,5,10\} b}{}, depending on ! Undefined control sequence. l.26724 \eqn {c/b \in [1,10)}{} ! Missing $ inserted. $ l.26724 \eqn{c/b \in [1,10)}{} ! Extra }, or forgotten $. l.26724 \eqn{c/b \in [1,10)} {} ! Undefined control sequence. l.26725 ...he two `\emph{bias}' coefficients, \eqn {h ! Undefined control sequence. l.26726 =}{}\code {high.u.bias} and \eqn{f =}{}\code{u5.bias}. ! Undefined control sequence. l.26726 =}{}\code{high.u.bias} and \eqn {f =}{}\code{u5.bias}. ! Undefined control sequence. l.26726 ...\code{high.u.bias} and \eqn{f =}{}\code {u5.bias}. ! Missing $ inserted. $ l.26727 ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26729 \end{Details} ! Missing } inserted. } l.26729 \end{Details} ! Missing } inserted. } l.26729 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26731 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26735 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26737 \begin{SeeAlso} \relax ! Undefined control sequence. l.26738 \code {\LinkA{axTicks}{axTicks}} for the computation of pretty axis tick ! Undefined control sequence. l.26738 \code{\LinkA {axTicks}{axTicks}} for the computation of pretty axis tick ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26740 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26742 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26743 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26744 pretty(1:15) # 0 2 4 6 8 10 12 14 16 ! You can't use `macro parameter character #' in horizontal mode. l.26745 pretty(1:15, h = 2) # 0 5 10 15 ! You can't use `macro parameter character #' in horizontal mode. l.26746 pretty(1:15, n = 4) # 0 5 10 15 ! You can't use `macro parameter character #' in horizontal mode. l.26747 pretty(1:15 * 2) # 0 5 10 15 20 25 30 ! You can't use `macro parameter character #' in horizontal mode. l.26748 pretty(1:20) # 0 5 10 15 20 ! You can't use `macro parameter character #' in horizontal mode. l.26749 pretty(1:20, n = 2) # 0 10 20 ! You can't use `macro parameter character #' in horizontal mode. l.26750 pretty(1:20, n = 10) # 0 2 4 ... 20 [260]> [34]] $ l.26753 ...int(diff(range(pretty(100 + c(0, pi*10^ -k)))))} ! Extra }, or forgotten $. l.26753 ...(range(pretty(100 + c(0, pi*10^-k)))))} ! Missing $ inserted. $ l.26754 ! You can't use `macro parameter character #' in vertical mode. l.26755 # #-- more bizarre, when min(x) == max(x): ! You can't use `macro parameter character #' in vertical mode. l.26755 ## -- more bizarre, when min(x) == max(x): Underfull \hbox (badness 10000) in paragraph at lines 26758--26762 []\OT1/cmr/m/n/10 add.names <- func-tion(v) names(v) <- paste(v); v ! Missing $ inserted. $ l.26767 cat("shrink=", formatC(2^ k, width = 9),":", ! Undefined control sequence. l.26768 ...1001, shrink.sml = 2^k), width = 6),"\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26769 \end{ExampleCode} ! Missing $ inserted. $ l.26769 \end{ExampleCode} ! Missing } inserted. } l.26769 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26770 \end{Examples} ! Undefined control sequence. l.26771 \HeaderA {Primitive}{Look Up a Primitive Function}{Primitive} ! Undefined control sequence. l.26772 \aliasA {.Primitive}{Primitive}{.Primitive} ! Undefined control sequence. l.26773 \aliasA {primitive}{Primitive}{primitive} ! Undefined control sequence. l.26774 \keyword {interface}{Primitive} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26776 \begin{Description} \relax ! Undefined control sequence. l.26777 \code {.Primitive} looks up by name a `primitive' ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26779 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26781 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 26763--26782 []\OT1/cmr/m/n/10 pretty(1.234e100) pretty(1001.1001) pretty(1001.1001, shrink = Underfull \hbox (badness 10000) in paragraph at lines 26763--26782 \OT1/cmr/m/n/10 0.2) for(k in -7:3) cat("shrink=", formatC(2$[]\OML/cmm/m/it/10 ; width \OT1/cmr/m/n/10 = 9)\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 " : Underfull \hbox (badness 2608) in paragraph at lines 26763--26782 \OT1/cmr/m/n/10 tiveLook Up a Prim-i-tive Func-tion-Prim-i-tive .Prim-i-tivePri m-i-tive.Primitive ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26785 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26787 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26788 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26789 \item[\code{name}] name of the \R{} function. ! Undefined control sequence. l.26789 \item[\code{name}] name of the \R {} function. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26790 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26791 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26793 \begin{Details} \relax ! Undefined control sequence. l.26794 The advantage of \code {.Primitive} over \code{\LinkA{.Internal}{.Int... ! Undefined control sequence. l.26794 ...vantage of \code{.Primitive} over \code {\LinkA{.Internal}{.Intern... ! Undefined control sequence. l.26794 ... of \code{.Primitive} over \code{\LinkA {.Internal}{.Internal}} ! Undefined control sequence. l.26797 \code {\LinkA{switch}{switch}}. For more details, see the `R Internals ! Undefined control sequence. l.26797 \code{\LinkA {switch}{switch}}. For more details, see the `R Internals ! Undefined control sequence. l.26802 This function is almost never used: \code {`name`} or, more carefully, ! Undefined control sequence. l.26803 \code {\LinkA{get}{get}(name, envir = baseenv())} work equally well a... ! Undefined control sequence. l.26803 \code{\LinkA {get}{get}(name, envir = baseenv())} work equally well a... ! Undefined control sequence. l.26805 as \R {} evolves). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26806 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26808 \begin{SeeAlso} \relax ! Undefined control sequence. l.26809 \code {\LinkA{.Internal}{.Internal}}. ! Undefined control sequence. l.26809 \code{\LinkA {.Internal}{.Internal}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Ty)pe H for immediate help. ... l.26810 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26812 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26813 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26816 .Internal # this one *must* be primitive! ! You can't use `macro parameter character #' in horizontal mode. l.26817 `if` # need backticks ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26818 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26819 \end{Examples} ! Undefined control sequence. l.26820 \HeaderA {print}{Print Values}{print} ! Undefined control sequence. l.26821 \methaliasA {print.Dlist}{print}{print.Dlist} ! Undefined control sequence. l.26822 \methaliasA {print.factor}{print}{print.factor} ! Undefined control sequence. l.26823 \methaliasA {print.function}{print}{print.function} ! Undefined control sequence. l.26824 \methaliasA {print.listof}{print}{print.listof} ! Undefined control sequence. l.26825 \methaliasA {print.simple.list}{print}{print.simple.list} ! Undefined control sequence. l.26826 \methaliasA {print.table}{print}{print.table} ! Undefined control sequence. l.26827 \keyword {print}{print} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26829 \begin{Description} \relax ! Undefined control sequence. l.26830 \code {print} prints its argument and returns it \emph{invisibly} (via ! Undefined control sequence. l.26831 \code {\LinkA{invisible}{invisible}(x)}). It is a generic function w... ! Undefined control sequence. l.26831 \code{\LinkA {invisible}{invisible}(x)}). It is a generic function w... ! Undefined control sequence. l.26832 ...thods can be easily added for new \code {\LinkA{class}{class}}es. ! Undefined control sequence. l.26832 ...an be easily added for new \code{\LinkA {class}{class}}es. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26833 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26835 \begin{Usage} Underfull \hbox (badness 1383) in paragraph at [-4lines 26802--26836 \OT1/cmr/m/n/10 mysqrt <- .Prim-i-tive("sqrt") c .In-ter-nal this one *must* b e prim-i-tive! Underfull \hbox (badness 2932) in paragraph at lines 26802--26836 \OT1/cmr/m/n/10 `if` need back-ticks print-Print Val-ue-sprint print.Dlistpr intprint.Dlist Underfull \hbox (badness 10000) in paragraph at lines 26802--26836 \OT1/cmr/m/n/10 print.factorprintprint.factor print.functionprintprint.function Underfull \hbox (badness 10000) in paragraph at lines 26802--26836 \OT1/cmr/m/n/10 print.listofprintprint.listof print.simple.listprintprint.simpl e.list ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26850 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26852 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26853 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26854 \item[\code{x}] an object used to select a method. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26855 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26856 \item[\code{quote}] logical, indicating whether or not strings shoul... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26858 \item[\code{max.levels}] integer, indicating how many levels should be ! Undefined control sequence. l.26859 printed for a factor; if \code {0}, no extra "Levels" line will be ! Undefined control sequence. l.26860 printed. The default, \code {NULL}, entails choosing \code{max.levels} ! Undefined control sequence. l.26860 ...lt, \code{NULL}, entails choosing \code {max.levels} ! Undefined control sequence. l.26861 ...levels print on one line of width \code {width}. [261]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26862 \item[\code{width}] only used when \code{max.levels} is NULL, see ab... ! Undefined control sequence. l.26862 \item[\code{width}] only used when \code {max.levels} is NULL, see ab... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26863 \item[\code{digits}] minimal number of \emph{significant} digits, see ! Undefined control sequence. l.26864 \code {\LinkA{print.default}{print.default}}. ! Undefined control sequence. l.26864 \code{\LinkA {print.default}{print.default}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26865 \item[\code{na.print}] character string (or \code{NULL}) indicating ! Undefined control sequence. l.26865 ...e{na.print}] character string (or \code {NULL}) indicating ! Undefined control sequence. l.26866 \code {\LinkA{NA}{NA}} values in printed output, see ! Undefined control sequence. l.26866 \code{\LinkA {NA}{NA}} values in printed output, see ! Undefined control sequence. l.26867 \code {\LinkA{print.default}{print.default}}. ! Undefined control sequence. l.26867 \code{\LinkA {print.default}{print.default}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26868 \item[\code{zero.print}] character specifying how zeros (\code{0}) s... ! Undefined control sequence. l.26868 ...] character specifying how zeros (\code {0}) should be ! Undefined control sequence. l.26869 printed; for sparse tables, using \code {"."} can produce more ! Undefined control sequence. l.26870 ...r to printing sparse matrices in \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.26870 ...CRAN.R-project.org/package=Matrix}{\pkg {Matrix}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26871 \item[\code{justify}] character indicating if strings should left- or ! Undefined control sequence. l.26872 ...ustified or left alone, passed to \code {\LinkA{format}{format}}. ! Undefined control sequence. l.26872 ...d or left alone, passed to \code{\LinkA {format}{format}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26873 \item[\code{useSource}] logical indicating if internally stored source ! Undefined control seq (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.tocuence. l.26875 \code {\LinkA{options}{options}(keep.source = TRUE)} has been in use. ! Undefined control sequence. l.26875 \code{\LinkA {options}{options}(keep.source = TRUE)} has been in use. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26876 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26877 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26879 \begin{Details} \relax ! Undefined control sequence. l.26880 The default method, \code {\LinkA{print.default}{print.default}} has ... ! Undefined control sequence. l.26880 The default method, \code{\LinkA {print.default}{print.default}} has ... ! Undefined control sequence. l.26881 Use \code {\LinkA{methods}{methods}("print")} to get all the methods ... ! Undefined control sequence. l.26881 Use \code{\LinkA {methods}{methods}("print")} to get all the methods ... ! Undefined control sequence. l.26882 \code {print} generic. ! Undefined control sequence. l.26884 \code {print.factor} allows some customization and is used for printing ! Undefined control sequence. l.26885 \code {\LinkA{ordered}{ordered}} factors as well. ! Undefined control sequence. l.26885 \code{\LinkA {ordered}{ordered}} factors as well. ! Undefined control sequence. l.26887 \code {print.table} for printing \code{\LinkA{table}{table}}s allows ... ! Undefined control sequence. l.26887 \code{print.table} for printing \code {\LinkA{table}{table}}s allows ... ! Undefined control sequence. l.26887 ...{print.table} for printing \code{\LinkA {table}{table}}s allows other ! Undefined control sequence. l.26891 See \code {\LinkA{noquote}{noquote}} as an example of a class whose main ! Undefined control sequence. l.26891 See \code{\LinkA {noquote}{noquote}} as an example of a class whose main ! Undefined control sequence. l.26892 purpose is a specific \code {print} method. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26893 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26895 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26899 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ) l.26901 \begin{SeeAlso} \relax ! Undefined control sequence. l.26902 The default method \code {\LinkA{print.default}{print.default}}, and ... ! Undefined control sequence. l.26902 The default method \code{\LinkA {print.default}{print.default}}, and ... ! Undefined control sequence. l.26903 methods above; further \code {\LinkA{options}{options}}, \code{\LinkA... ! Undefined control sequence. l.26903 methods above; further \code{\LinkA {options}{options}}, \code{\LinkA... ! Undefined control sequence. l.26903 ... \code{\LinkA{options}{options}}, \code {\LinkA{noquote}{noquote}}. ! Undefined control sequence. l.26903 ...\LinkA{options}{options}}, \code{\LinkA {noquote}{noquote}}. ! Undefined control sequence. l.26906 \code {\LinkA{cat}{cat}}, \code{\LinkA{format}{format}} or also \code... ! Undefined control sequence. l.26906 \code{\LinkA {cat}{cat}}, \code{\LinkA{format}{format}} or also \code... ! Undefined control sequence. l.26906 \code{\LinkA{cat}{cat}}, \code {\LinkA{format}{format}} or also \code... ! Undefined control sequence. l.26906 \code{\LinkA{cat}{cat}}, \code{\LinkA {format}{format}} or also \code... ! Undefined control sequence. l.26906 ...e{\LinkA{format}{format}} or also \code {\LinkA{write}{write}}. ! Undefined control sequence. l.26906 ...A{format}{format}} or also \code{\LinkA {write}{write}}. ! Undefined control sequence. l.26908 \code {\LinkA{.print.via.format}{.print.via.format}} in package \pkg{... ! Undefined control sequence. l.26908 \code{\LinkA {.print.via.format}{.print.via.format}} in package \pkg{... ! Undefined control sequence. l.26908 ...at}{.print.via.format}} in package \pkg {tools}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26909 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26911 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26912 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26915 ts(1:20) # -- print is the "Default function" --> print.ts(.) is called ! You can't use `macro parameter character #' in vertical mode. l.26918 # # Printing of factors ! You can't use `macro parameter character #' in vertical mode. l.26918 ## Printing of factors ! You can't use `macro parameter character #' in math mode. l.26919 attenu$station # # 117 levels -> 'max.levels' depending on width ! You can't use `macro parameter character #' in math mode. l.26919 attenu$station ## 117 levels -> 'max.levels' depending on width ! Missing $ inserted. $ l.26920 Underfull \hbox (badness 10000) in paragraph at lines 26918--26920 []\OT1/cmr/m/n/10 Printing of fac-tors attenu$\OML/cmm/m/it/10 station\OT1/cmr/ m/n/10 117\OML/cmm/m/it/10 levels\OMS/cmsy/m/n/10 ^ (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc^@ \OML/cmm/m/it/10 >[] ! You can't use `macro parameter character #' in vertical mode. l.26921 # # ordered factors: levels "l1 < l2 < .." ! You can't use `macro parameter character #' in vertical mode. l.26921 ## ordered factors: levels "l1 < l2 < .." ! You can't use `macro parameter character #' in vertical mode. l.26925 # # Printing of sparse (contingency) tables ! You can't use `macro parameter character #' in vertical mode. l.26925 ## Printing of sparse (contingency) tables ! You can't use `macro parameter character #' in horizontal mode. l.26929 table(t1, t2) # simple ! You can't use `macro parameter character #' in horizontal mode. l.26930 print(table(t1, t2), zero.print = ".") # nicer to read ! You can't use `macro parameter character #' in vertical mode. l.26932 # # same for non-integer "table": ! You can't use `macro parameter character #' in vertical mode. l.26932 ## same for non-integer "table": ! You can't use `macro parameter character #' in horizontal mode. l.26935 print(T, zero.print = ".") # quite nicer, ! You can't use `macro parameter character #' in horizontal mode. l.26937 # # still slightly inferior to Matrix::Matrix(T) for larger T ! You can't use `macro parameter character #' in horizontal mode. l.26937 ## still slightly inferior to Matrix::Matrix(T) for larger T Underfull \hbox (badness 10000) in paragraph at lines 26932--26938 []\OT1/cmr/m/n/10 same for non-integer "ta-ble": T <- ta-ble(t2,t1) T <- T * Underfull \hbox (badness 1803) in paragraph at lines 26932--26938 \OT1/cmr/m/n/10 (1+round(rlnorm(length(T)))/4) print(T, zero.print = ".") quit e nicer, ! You can't use `macro parameter character #' in vertical mode. l.26939 # # Corner cases with empty extents: ! You can't use `macro parameter character #' in vertical mode. l.26939 ## Corner cases with empty extents: ! You can't use `macro parameter character #' in horizontal mode. l.26940 table(1, NA) # < table of extent 1 x 0 > ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26941 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26942 \end{Examples} ! Undefined control sequence. l.26943 \HeaderA {print.data.frame}{Printing Data Frames}{print.data.frame} ! Undefined control sequence. l.26944 \keyword {print}{print.data.frame} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26946 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26948 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26950 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26956 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26958 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26959 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26960 \item[\code{x}] object of class \code{data.frame}. ! Undefined control sequence. l.26960 \item[\code{x}] object of class \code {data.frame}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26961 \item[\code{...}] optional arguments to \code{print} or \code{plot} ... ! Undefined control sequence. l.26961 ...\code{...}] optional arguments to \code {print} or \code{plot} met... ! Undefined control sequence. l.26961 ...onal arguments to \code{print} or \code {plot} methods. [262] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26962 \item[\code{digits}] the minimum number of significant digits to be ... ! Undefined control sequence. l.26963 \code {\LinkA{print.default}{print.default}}. ! Undefined control sequence. l.26963 \code{\LinkA {print.default}{print.default}}. Underfull \hbox (badness 10000) in paragraph at lines 26962--26964 []\OT1/cmr/m/n/10 the min-i-mum num-ber of sig-nif-i-cant dig-its to be used: s ee ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26964 \item[\code{quote}] logical, indicating whether or not entries shoul... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26966 \item[\code{right}] logical, indicating whether or not strings shoul... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26968 \item[\code{row.names}] logical (or character vector), indicating wh... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26970 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26971 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26973 \begin{Details} \relax ! Undefined control sequence. l.26974 This calls \code {\LinkA{format}{format}} which formats the data frame ! Undefined control sequence. l.26974 This calls \code{\LinkA {format}{format}} which formats the data frame ! Undefined control sequence. l.26976 to the \code {print} method for matrices. ! Undefined control sequence. l.26978 When \code {quote = TRUE} only the entries are quoted not the row names ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26980 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26982 \begin{SeeAlso} \relax ! Undefined control sequence. l.26983 \code {\LinkA{data.frame}{data.frame}}. ! Undefined control sequence. l.26983 \code{\LinkA {data.frame}{data.frame}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26984 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26986 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26987 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.26989 # print() with defaults ! You can't use `macro parameter character #' in horizontal mode. l.26991 # suppresses row.names and quotes all entries ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26992 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26993 \end{Examples} ! Undefined control sequence. l.26994 \HeaderA {print.default}{Default Printing}{print.default} ! Undefined control sequence. l.26995 \keyword {print}{print.default} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.26997 \begin{Description} \relax ! Undefined control sequence. l.26998 \code {print.default} is the \emph{default} method of the generic ! Undefined control sequence. l.26999 \code {\LinkA{print}{print}} function which prints its argument. ! Undefined control sequence. l.26999 \code{\LinkA {print}{print}} function which prints its argument. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27000 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27002 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27009 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27011 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27012 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27013 \item[\code{x}] the object to be printed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27014 \item[\code{digits}] a non-null value for \code{digits} specifies th... ! Undefined control sequence. l.27014 ...ode{digits}] a non-null value for \code {digits} specifies the min... ! Undefined control sequence. l.27016 \code {NULL}, uses \code{\LinkA{getOption}{getOption}("digits")}. (F... ! Undefined control sequence. l.27016 \code{NULL}, uses \code {\LinkA{getOption}{getOption}("digits")}. (F... ! Undefined control sequence. l.27016 \code{NULL}, uses \code{\LinkA {getOption}{getOption}("digits")}. (F... ! Undefined control sequence. l.27017 ...pretation for complex numbers see \code {\LinkA{signif}{signif}}.) ! Undefined control sequence. l.27017 ...on for complex numbers see \code{\LinkA {signif}{signif}}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27021 \item[\code{quote}] logical, indicating whether or not strings ! Undefined control sequence. l.27022 (\code {\LinkA{character}{character}}s) should be printed with surrou... ! Undefined control sequence. l.27022 (\code{\LinkA {character}{character}}s) should be printed with surrou... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27023 \item[\code{na.print}] a character string which is used to indicate ! Undefined control sequence. l.27024 \code {\LinkA{NA}{NA}} values in printed output, or \code{NULL} ! Undefined control sequence. l.27024 \code{\LinkA {NA}{NA}} values in printed output, or \code{NULL} ! Undefined control sequence. l.27024 ...NA}} values in printed output, or \code {NULL} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27026 \item[\code{print.gap}] a non-negative integer \eqn{\le 1024}{}, ! Undefined control sequence. l.27026 ...print.gap}] a non-negative integer \eqn {\le 1024}{}, ! Missing $ inserted. $ l.27026 ...t.gap}] a non-negative integer \eqn{\le 1024}{}, ! Extra }, or forgotten $. l.27026 ...] a non-negative integer \eqn{\le 1024} {}, ! Undefined control sequence. l.27027 or \code {NULL} (meaning 1), giving the spacing between adjacent ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27029 \item [\code{right}] logical, indicating whether or not strings shoul... ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27029 \item[\code{right}] logical, indicating whether or not strings shoul... ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27029 \item[\code{right}] logical, indicating whether or not strings shoul... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27029 \item[\code{right}] logical, indicating whether or not strings shoul... ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27031 \item [\code{max}] a non-null value for \code{max} specifies the appr... ! Missing $ inserted. $ l.27031 \item[\code{max}] a non-null value for \code{max} specifies the appr... Overfull \hbox (648.92581pt too wide) in paragraph at lines 27026--27031 []\OT1/cmr/m/n/10 a non-negative in-te-ger $\OMS/cmsy/m/n/10 ^^T \OT1/cmr/m/n/1 0 1024[]\OML/cmm/m/it/10 ; or[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 meaning\OT1/cm r/m/n/10 1)\OML/cmm/m/it/10 ; givingthespacingbetweenadjacentcolumnsinprintedve ctors; matricesandarrays:logical; indicatingwhetherornotstringsshouldberightali gned:Thedefaultisleftalignment:[]$ ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27031 \item[\code{max}] a non-null value for \code{max} specifies the appr... ! Undefined control sequence. l.27031 ...[\code{max}] a non-null value for \code {max} specifies the approx... ! Undefined control sequence. l.27032 ...ries to be printed. The default, \code {NULL}, ! Undefined control sequence. l.27033 uses \code {\LinkA{getOption}{getOption}("max.print")}; see that help... ! Undefined control sequence. l.27033 uses \code{\LinkA {getOption}{getOption}("max.print")}; see that help... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27035 \item[\code{useSource}] logical, indicating whether to use source ! Undefined control sequence. l.27036 ... or copies rather than deparsing \LinkA {language objects}{languag... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27038 \item[\code{...}] further arguments to be passed to or from other ! LaTeX Error: \begin{document} ended by \end{ldescription}. See) (Acknowledgements) the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27040 \end{ldescription} ! Missing } inserted. } l.27040 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27041 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27043 \begin{Details} \relax ! Undefined control sequence. l.27044 The default for printing \code {NA}s is to print \code{NA} (without ! Undefined control sequence. l.27044 ...r printing \code{NA}s is to print \code {NA} (without ! Undefined control sequence. l.27045 quotes) unless this is a character \code {NA} \emph{and} \code{quote = ! Undefined control sequence. l.27045 ... a character \code{NA} \emph{and} \code {quote = ! Undefined control sequence. l.27046 FALSE}, when \samp {} is printed. ! Undefined control sequence. l.27049 means that \code {digits} specifies the minimum number of significant [263 Chapter 1 [1]] ! Undefined control sequence. l.27057 \code {digits} to \code{print.default}, but using the default values ! Undefined control sequence. l.27057 \code{digits} to \code {print.default}, but using the default values ! Undefined control sequence. l.27060 Option \code {width} controls the printing of vectors, matrices and ! Undefined control sequence. l.27061 arrays, and option \code {deparse.cutoff} controls the printing of ! Undefined control sequence. l.27062 \LinkA {language objects}{language objects} such as calls and formulae. ! Undefined control sequence. l.27064 When the \pkg {methods} package is attached, \code{print} will call ! Undefined control sequence. l.27064 ...pkg{methods} package is attached, \code {print} will call ! Undefined control sequence. l.27065 \code {\LinkA{show}{show}} for \R{} objects with formal classes if ca... ! Undefined control sequence. l.27065 \code{\LinkA {show}{show}} for \R{} objects with formal classes if ca... ! Undefined control sequence. l.27065 \code{\LinkA{show}{show}} for \R {} objects with formal classes if ca... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27067 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27069 \begin{Section} {Large number of digits} ! Undefined control sequence. l.27070 Note that for large values of \code {digits}, currently for ! Undefined control sequence. l.27071 \code {digits >= 16}, the calculation of the number of significant ! Undefined control sequence. l.27073 implementation of \samp {sprintf()} functionality. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27074 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27076 \begin{Section} {Single-byte locales} ! Undefined control sequence. l.27078 ...one of the ANSI escape sequences (\samp {\bsl{}a}, \samp{\bsl{}b}, ! Undefined control sequence. l.27078 ...f the ANSI escape sequences (\samp{\bsl {}a}, \samp{\bsl{}b}, ! Undefined control sequence. l.27078 ...escape sequences (\samp{\bsl{}a}, \samp {\bsl{}b}, ! Undefined control sequence. l.27078 ...e sequences (\samp{\bsl{}a}, \samp{\bsl {}b}, ! Undefined control sequence. l.27079 \samp {\bsl{}f}, \samp{\bsl{}n}, \samp{\bsl{}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 \samp{\bsl {}f}, \samp{\bsl{}n}, \samp{\bsl{}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 \samp{\bsl{}f}, \samp {\bsl{}n}, \samp{\bsl{}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 \samp{\bsl{}f}, \samp{\bsl {}n}, \samp{\bsl{}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 \samp{\bsl{}f}, \samp{\bsl{}n}, \samp {\bsl{}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 \samp{\bsl{}f}, \samp{\bsl{}n}, \samp{\bsl {}r}, \samp{\bsl{}t}, \sam... ! Undefined control sequence. l.27079 ..., \samp{\bsl{}n}, \samp{\bsl{}r}, \samp {\bsl{}t}, \samp{\bsl{}v},... ! Undefined control sequence. l.27079 ...mp{\bsl{}n}, \samp{\bsl{}r}, \samp{\bsl {}t}, \samp{\bsl{}v}, \sam... ! Undefined control sequence. l.27079 ..., \samp{\bsl{}r}, \samp{\bsl{}t}, \samp {\bsl{}v}, \samp{\bsl{}\bs... ! Undefined control sequence. l.27079 ...mp{\bsl{}r}, \samp{\bsl{}t}, \samp{\bsl {}v}, \samp{\bsl{}\bsl{}} and ! Undefined control sequence. l.27079 ..., \samp{\bsl{}t}, \samp{\bsl{}v}, \samp {\bsl{}\bsl{}} and ! Undefined control sequence. l.27079 ...mp{\bsl{}t}, \samp{\bsl{}v}, \samp{\bsl {}\bsl{}} and ! Undefined control sequence. l.27079 ...l{}t}, \samp{\bsl{}v}, \samp{\bsl{}\bsl {}} and ! Undefined control sequence. l.27080 \samp {\bsl{}0}: see \LinkA{Quotes}{Quotes}), or failing that as a 3-... ! Undefined control sequence. l.27080 \samp{\bsl {}0}: see \LinkA{Quotes}{Quotes}), or failing that as a 3-... ! Undefined control sequence. l.27080 \samp{\bsl{}0}: see \LinkA {Quotes}{Quotes}), or failing that as a 3-... ! Undefined control sequence. l.27082 implemented correctly) is printed as \samp {\bsl{}243}. Which charac... ! Undefined control sequence. l.27082 ...ted correctly) is printed as \samp{\bsl {}243}. Which characters ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27087 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27089 \begin{Section} {Unicode and other multi-byte locales} ! Undefined control sequence. l.27090 ...he characters in the ASCII range (\samp {0x00} to ! Undefined control sequence. l.27091 \samp {0x7f}) are printed in the same way, as-is if printable, otherwise ! Undefined control sequence. l.27096 of the form \samp {\bsl{}uxxxx} or \samp{\bsl{}Uxxxxxxxx} (in hexadec... ! Undefined control sequence. l.27096 of the form \samp{\bsl {}uxxxx} or \samp{\bsl{}Uxxxxxxxx} (in hexadec... ! Undefined control sequence. l.27096 of the form \samp{\bsl{}uxxxx} or \samp {\bsl{}Uxxxxxxxx} (in hexadec... ! Undefined control sequence. l.27096 ...e form \samp{\bsl{}uxxxx} or \samp{\bsl {}Uxxxxxxxx} (in hexadecim... ! Undefined control sequence. l.27101 it is unlikely that \R {} compiles on such a system. ! Undefined control sequence. l.27107 \samp {\bsl{}xab} and this is repeated until the start of a valid cha... ! Undefined control sequence. l.27107 \samp{\bsl {}xab} and this is repeated until the start of a valid cha... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27109 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27111 \begin{SeeAlso} \relax ! Undefined control sequence. l.27112 The generic \code {\LinkA{print}{print}}, \code{\LinkA{options}{optio... ! Undefined control sequence. l.27112 The generic \code{\LinkA {print}{print}}, \code{\LinkA{options}{optio... ! Undefined control sequence. l.27112 ...eric \code{\LinkA{print}{print}}, \code {\LinkA{options}{options}}. ! Undefined control sequence. l.27112 ...ode{\LinkA{print}{print}}, \code{\LinkA {options}{options}}. ! Undefined control sequence. l.27113 The \code {"\LinkA{noquote}{noquote}"} class and print method. ! Undefined control sequence. l.27113 The \code{"\LinkA {noquote}{noquote}"} class and print method. ! Undefined control sequence. l.27115 \code {\LinkA{encodeString}{encodeString}}, which encodes a character... ! Undefined control sequence. l.27115 \code{\LinkA {encodeString}{encodeString}}, which encodes a character... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27117 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27119 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27120 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.27128 utils::head(M) # makes more sense than ! You can't use `macro parameter character #' in horizontal mode. l.27129 print(M, max = 1000) # prints 90 rows and a message about omitting 910 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27130 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27131 \end{Examples} ! Undefined control sequence. l.27132 \HeaderA {prmatrix}{Print Matrices, Old-style}{prmatrix} ! Undefined control sequence. l.27133 \keyword {print}{prmatrix} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27135 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27137 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27139 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27144 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27146 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27147 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27148 \item[\code{x}] numeric or character matrix. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27149 \item[\code{rowlab, collab}] (optional) character vectors giving row... ! Undefined control sequence. l.27151 \code {\LinkA{dimnames}{dimnames}(x)}. ! Undefined control sequence. l.27151 \code{\LinkA {dimnames}{dimnames}(x)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27152 \item[\code{quote}] logical; if \code{TRUE} and \code{x} is of mode ! Undefined control sequence. l.27152 \item[\code{quote}] logical; if \code {TRUE} and \code{x} is of mode ! Undefined control sequence. l.27152 ...ote}] logical; if \code{TRUE} and \code {x} is of mode ! Undefined control sequence. l.27153 \code {"character"}, \emph{quotes} (\samp{"}) are used. ! Undefined control sequence. l.27153 \code{"character"}, \emph{quotes} (\samp {"}) are used. [264]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27154 \item[\code{right}] if \code{TRUE} and \code{x} is of mode ! Undefined control sequence. l.27154 \item[\code{right}] if \code {TRUE} and \code{x} is of mode ! Undefined control sequence. l.27154 ...\code{right}] if \code{TRUE} and \code {x} is of mode ! Undefined control sequence. l.27155 \code {"character"}, the output columns are \emph{right}-justified. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27156 \item[\code{na.print}] how \code{NA}s are printed. If this is non-n... ! Undefined control sequence. l.27156 \item[\code{na.print}] how \code {NA}s are printed. If this is non-n... ! Undefined control sequence. l.27157 value is used to represent \code {NA}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27158 \item[\code{...}] arguments for \code{print} methods. ! Undefined control sequence. l.27158 \item[\code{...}] arguments for \code {print} methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27159 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27160 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27162 \begin{Details} \relax ! Undefined control sequence. l.27163 \code {prmatrix} is an earlier form of \code{print.matrix}, and ! Undefined control sequence. l.27163 ...e{prmatrix} is an earlier form of \code {print.matrix}, and ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27165 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27167 \begin{Value} ! Undefined control sequence. l.27168 Invisibly returns its argument, \code {x}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27169 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27171 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27175 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27177 \begin{SeeAlso} \relax ! Undefined control sequence. l.27178 \code {\LinkA{print.default}{print.default}}, and other \code{\LinkA{... ! Undefined control sequence. l.27178 \code{\LinkA {print.default}{print.default}}, and other \code{\LinkA{... ! Undefined control sequence. l.27178 ...fault}{print.default}}, and other \code {\LinkA{print}{print}} met... ! Undefined control sequence. l.27178 ...print.default}}, and other \code{\LinkA {print}{print}} methods. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27179 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27181 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27182 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.27187 chm # uses print.matrix() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27189 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27190 \end{Examples} ! Undefined control sequence. l.27191 \HeaderA {proc.time}{Running Time of R}{proc.time} ! Undefined control sequence. l.27192 \aliasA {print.proc\_time}{proc.time}{print.proc.Rul.time} ! Undefined control sequence. l.27193 \aliasA {summary.proc\_time}{proc.time}{summary.proc.Rul.time} ! Undefined control sequence. l.27194 \keyword {utilities}{proc.time} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27196 \begin{Description} \relax ! Undefined control sequence. l.27197 \code {proc.time} determines how much real and CPU time (in seconds) ! Undefined control sequence. l.27198 the currently running \R {} process has already taken. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27199 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27201 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 27185--27202 \OT1/cmr/m/n/10 Time of Rproc.time print.proc[]timeproc.timeprint.proc.Rul.time sum- Underfull \hbox (badness 5064) in paragraph at lines 27185--27202 \OT1/cmr/m/n/10 mary.proc[]timeproc.timesummary.proc.Rul.time util-i-tiesproc.t ime proc.time ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27205 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27207 \begin{Details} \relax ! Undefined control sequence. l.27208 \code {proc.time} returns five elements for backwards compatibility, ! Undefined control sequence. l.27209 but its \code {print} method prints a named vector of ! Undefined control sequence. l.27211 times of the current \R {} process and any child processes on which it ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27214 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27216 \begin{Value} ! Undefined control sequence. l.27217 An object of class \code {"proc\_time"} which is a numeric vector of ! Undefined control sequence. l.27219 currently running \R {} process, and the cumulative sum of user and ! Undefined control sequence. l.27221 waited. (The \code {print} method uses the \code{summary} method to ! Undefined control sequence. l.27221 ...(The \code{print} method uses the \code {summary} method to ! Undefined control sequence. l.27233 be given as \code {NA}. ! Undefined control sequence. l.27240 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27241 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27243 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27247 \end{References} Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3 ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27249 \begin{SeeAlso} \relax ! Undefined control sequence. l.27250 \code {\LinkA{system.time}{system.time}} for timing an \R{} expression, ! Undefined control sequence. l.27250 \code{\LinkA {system.time}{system.time}} for timing an \R{} expression, ! Undefined control sequence. l.27250 ...em.time}{system.time}} for timing an \R {} expression, ! Undefined control sequence. l.27251 \code {\LinkA{gc.time}{gc.time}} for how much of the time was spent i... ! Undefined control sequence. l.27251 \code{\LinkA {gc.time}{gc.time}} for how much of the time was spent i... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27253 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27255 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27256 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.27258 # # a way to time an R expression: system.time is preferred ! You can't use `macro parameter character #' in vertical mode. l.27258 ## a way to time an R expression: system.time is preferred ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27262 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27263 \end{Examples} ! Undefined control sequence. l.27264 \HeaderA {prod}{Product of Vector Elements}{prod} ! Undefined control sequence. l.27265 \keyword {arith}{prod} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27267 \begin{Description} \relax ! Undefined control sequence. l.27268 \code {prod} returns the product of all the values ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27270 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27272 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27276 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27278 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27279 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27280 \item[\code{...}] numeric or complex or logical vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27281 \item[\code{na.rm}] logical. Should missing values be removed? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27282 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27283 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27285 \begin{Details} \relax ! Undefined control sequence. l.27286 If \code {na.rm} is \code{FALSE} an \code{NA} ! Undefined control sequence. l.27286 If \code{na.rm} is \code {FALSE} an \code{NA} ! Undefined control sequence. l.27286 If \code{na.rm} is \code{FALSE} an \code {NA} ! Undefined control sequence. l.27288 a value of \code {NA} to be returned, otherwise ! Undefined control sequence. l.27289 \code {NA} values are ignored. [265]] ! Undefined control sequence. l.27292 directly or via the \code {\LinkA{Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.27292 directly or via the \code{\LinkA {Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.27293 ...s to work properly, the arguments \code {...} should be ! Undefined control sequence. l.27297 For historical reasons, \code {NULL} is accepted and treated as if it ! Undefined control sequence. l.27298 were \code {numeric(0)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27299 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27301 \begin{Value} ! Undefined control sequence. l.27302 The product, a numeric (of type \code {"double"}) or complex vector o... ! Undefined control sequence. l.27303 \strong {NB:} the product of an empty set is one, by definition. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27304 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27306 \begin{Section} {S4 methods} ! Undefined control sequence. l.27307 This is part of the S4 \code {\LinkA{Summary}{S4groupGeneric}} ! Undefined control sequence. l.27307 This is part of the S4 \code{\LinkA {Summary}{S4groupGeneric}} ! Undefined control sequence. l.27309 \code {x, ..., na.rm}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27310 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27312 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27316 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27318 \begin{SeeAlso} \relax ! Undefined control sequence. l.27319 \code {\LinkA{sum}{sum}}, ! Undefined control sequence. l.27319 \code{\LinkA {sum}{sum}}, ! Undefined control sequence. l.27320 \code {\LinkA{cumprod}{cumprod}}, \code{\LinkA{cumsum}{cumsum}}. ! Undefined control sequence. l.27320 \code{\LinkA {cumprod}{cumprod}}, \code{\LinkA{cumsum}{cumsum} [4}. ! Undefined control sequence. l.27320 \code{\LinkA{cumprod}{cumprod}}, \code {\LinkA{cumsum}{cumsum}}. ! Undefined control sequence. l.27320 ...\LinkA{cumprod}{cumprod}}, \code{\LinkA {cumsum}{cumsum}}. ! Undefined control sequence. l.27322 `\LinkA {plotmath}{plotmath}' for the use of \code{prod} in plot anno... ! Undefined control sequence. l.27322 ...otmath}{plotmath}' for the use of \code {prod} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27323 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27325 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27326 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27328 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27329 \end{Examples} ! Undefined control sequence. l.27330 \HeaderA {prop.table}{Express Table Entries as Fraction of Marginal T... ! Undefined control sequence. l.27331 \keyword {array}{prop.table} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27333 \begin{Description} \relax ! Undefined control sequence. l.27334 This is really \code {sweep(x, margin, margin.table(x, margin), "/")} ! Undefined control sequence. l.27335 for newbies, except that if \code {margin} has length zero, then one ! Undefined control sequence. l.27336 gets \code {x/sum(x)}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27337 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27339 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 27322--27340 []\OT1/cmr/m/n/10 `plotmathplotmath' for the use of prod in plot an-no-ta-tion. Underfull \hbox (badness 1509) in paragraph at lines 27322--27340 \OT1/cmr/m/n/10 print(prod(1:7)) == print(gamma(8)) prop.tableExpress Ta-ble En-tries ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27343 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27345 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27346 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27347 \item[\code{x}] table ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27348 \item[\code{margin}] index, or vector of indices to generate margin... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27349 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27350 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27352 \begin{Value} ! Undefined control sequence. l.27353 Table like \code {x} expressed relative to \code{margin} ! Undefined control sequence. l.27353 ...ke \code{x} expressed relative to \code {margin} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27354 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27356 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27358 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27360 \begin{SeeAlso} \relax ! Undefined control sequence. l.27361 \code {\LinkA{margin.table}{margin.table}} ! Undefined control sequence. l.27361 \code{\LinkA {margin.table}{margin.table}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.27362 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27364 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27365 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27369 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27370 \end{Examples} ! Undefined control sequence. l.27371 \HeaderA {pushBack}{Push Text Back on to a Connection}{pushBack} ! Undefined control sequence. l.27372 \aliasA {clearPushBack}{pushBack}{clearPushBack} ! Undefined control sequence. l.27373 \aliasA {pushBackLength}{pushBack}{pushBackLength} ! Undefined control sequence. l.27374 \keyword {connection}{pushBack} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27376 \begin{Description} \relax ! Undefined control sequence. l.27377 ...s to push back text lines onto a \LinkA {connection}{connection}, ... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27379 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27381 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27388 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27390 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27391 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27392 \item[\code{data}] a character vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27393 \item[\code{connection}] A \LinkA{connection}{connection}. ! Undefined control sequence. l.27393 \item[\code{connection}] A \LinkA {connection}{connection}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27394 \item[\code{newLine}] logical. If true, a newline is appended to ea... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27396 \item[\code{encoding}] character string, partially matched. See det... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27397 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27398 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27400 \begin{Details} \relax ! Undefined control sequence. l.27403 ...irst string from the last call to \code {pushBack}. Lines which ! Undefined control sequence. l.27406 \code {\LinkA{readLines}{readLines}} and \code{\LinkA{scan}{scan}}. ! Undefined control sequence. l.27406 \code{\LinkA {readLines}{readLines}} and \code{\LinkA{scan}{scan}}. ! Undefined control sequence. l.27406 ...\LinkA{readLines}{readLines}} and \code {\LinkA{scan}{scan}}. ! Undefined control sequence. l.27406 ...readLines}{readLines}} and \code{\LinkA {scan}{scan}}. ! Undefined control sequence. l.27412 commands from the console and \code {\LinkA{scan}{scan}("")} ignore p... ! Undefined control sequence. l.27412 commands from the console and \code{\LinkA {scan}{scan}("")} ignore p... ! Undefined control sequence. l.27413 \code {\LinkA{stdin}{stdin}}. ! Undefined control sequence. l.27413 \code{\LinkA {stdin}{stdin}}. ! Undefined control sequence. l.27416 \code {\LinkA{Encoding}{Encoding}}) are pushed back they are converte... ! Undefined control sequence. l.27416 \code{\LinkA {Encoding}{Encoding}}) are pushed back they are converte... ! Undefined control sequence. l.27417 current encoding if \code {encoding = ""}. This may involve ! Undefined control sequence. l.27418 representing characters as \samp {} if they cannot be ! Undefined control sequence. l.27419 ...hey will be converted to UTF-8 if \code {encoding = ! Undefined control sequence. l.27420 "UTF-8"} or left as-is if \code {encoding = "bytes"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27421 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27423 \begin{Value} ! Undefined control sequence. l.27424 \code {pushBack} and \code{clearPushBack()} return nothing, invisibly. ! Undefined control sequence. l.27424 \code{pushBack} and \code {clearPushBack()} return nothing, invisibly. [266 [5] ! Undefined control sequence. l.27426 \code {pushBackLength} returns the number of lines currently pushed b... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27427 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27429 \begin{SeeAlso} \relax ! Undefined control sequence. l.27430 \code {\LinkA{connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.27430 \code{\LinkA {connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.27430 ...LinkA{connections}{connections}}, \code {\LinkA{readLines}{readLin... ! Undefined control sequence. l.27430 ...onnections}{connections}}, \code{\LinkA {readLines}{readLines}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27431 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27433 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27434 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27444 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27445 \end{Examples} ! Undefined control sequence. l.27446 \HeaderA {qr}{The QR Decomposition of a Matrix}{qr} ! Undefined control sequence. l.27447 \aliasA {as.qr}{qr}{as.qr} ! Undefined control sequence. l.27448 \aliasA {is.qr}{qr}{is.qr} ! Undefined control sequence. l.27449 \methaliasA {qr.coef}{qr}{qr.coef} ! Undefined control sequence. l.27450 \methaliasA {qr.default}{qr}{qr.default} ! Undefined control sequence. l.27451 \methaliasA {qr.fitted}{qr}{qr.fitted} ! Undefined control sequence. l.27452 \methaliasA {qr.qty}{qr}{qr.qty} ! Undefined control sequence. l.27453 \methaliasA {qr.qy}{qr}{qr.qy} ! Undefined control sequence. l.27454 \methaliasA {qr.resid}{qr}{qr.resid} ! Undefined control sequence. l.27455 \methaliasA {qr.solve}{qr}{qr.solve} ! Undefined control sequence. l.27456 \aliasA {solve.qr}{qr}{solve.qr} ! Undefined control sequence. l.27457 \keyword {algebra}{qr} ! Undefined control sequence. l.27458 \keyword {array}{qr} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for imm]ediate help. ... l.27460 \begin{Description} \relax ! Undefined control sequence. l.27461 \code {qr} computes the QR decomposition of a matrix. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27462 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27464 \begin{Usage} Underfull \hbox (badness 1360) in paragraph at lines 27426--27465 []\OT1/cmr/m/n/10 pushBackLength re-turns the num-ber of lines cur-rently pushe d back. Underfull \hbox (badness 1221) in paragraph at lines 27426--27465 \OT1/cmr/m/n/10 con-nec-tion-scon-nec-tions, read-Li-nes-read-Lines. zz <- t extCon-nec- Underfull \hbox (badness 10000) in paragraph at lines 27426--27465 \OT1/cmr/m/n/10 qr.coefqrqr.coef qr.defaultqrqr.default qr.fittedqrqr.fitted qr .qtyqrqr.qty ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27482 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27484 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27485 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27486 \item[\code{x}] a numeric or complex matrix whose QR decomposition i... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27488 \item[\code{tol}] the tolerance for detecting linear dependencies in... ! Undefined control sequence. l.27489 columns of \code {x}. Only used if \code{LAPACK} is false and ! Undefined control sequence. l.27489 columns of \code{x}. Only used if \code {LAPACK} is false and ! Undefined control sequence. l.27490 \code {x} is real. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27491 \item[\code{qr}] a QR decomposition of the type computed by \code{qr}. ! Undefined control sequence. l.27491 ...mposition of the type computed by \code {qr}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27492 \item[\code{y, b}] a vector or matrix of right-hand sides of equations. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27493 \item[\code{a}] a QR decomposition or (\code{qr.solve} only) a recta... ! Undefined control sequence. l.27493 ...[\code{a}] a QR decomposition or (\code {qr.solve} only) a rectang... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27494 \item[\code{k}] effective rank. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27495 \item[\code{LAPACK}] logical. For real \code{x}, if true use LAPACK ! Undefined control sequence. l.27495 ...\code{LAPACK}] logical. For real \code {x}, if true use LAPACK ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27497 \item[\code{...}] further arguments passed to or from other methods ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27498 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27499 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27501 \begin{Details} \relax ! Undefined control sequence. l.27504 equation \eqn {\bold{Ax} = \bold{b}}{} for given matrix \eqn{\bold{A}... ! Undefined control sequence. l.27504 equation \eqn{\bold {Ax} = \bold{b}}{} for given matrix \eqn{\bold{A}... ! Undefined control sequence. l.27504 equation \eqn{\bold{Ax} = \bold {b}}{} for given matrix \eqn{\bold{A}... ! Undefined control sequence. l.27504 ...Ax} = \bold{b}}{} for given matrix \eqn {\bold{A}}{}, ! Undefined control sequence. l.27504 ...\bold{b}}{} for given matrix \eqn{\bold {A}}{}, ! Undefined control sequence. l.27505 and vector \eqn {\bold{b}}{}. It is useful for computing regression ! Undefined control sequence. l.27505 and vector \eqn{\bold {b}}{}. It is useful for computing regression ! Undefined control sequence. l.27508 The functions \code {qr.coef}, \code{qr.resid}, and \code{qr.fitted} ! Undefined control sequence. l.27508 The functions \code{qr.coef}, \code {qr.resid}, and \code{qr.fitted} ! Undefined control sequence. l.27508 ...de{qr.coef}, \code{qr.resid}, and \code {qr.fitted} ! Undefined control sequence. l.27510 fitting \code {y} to the matrix with QR decomposition \code{qr}. ! Undefined control sequence. l.27510 ... the matrix with QR decomposition \code {qr}. ! Undefined control sequence. l.27511 ... some of the coefficients will be \code {NA}.) ! Undefined control sequence. l.27512 \code {qr.qy} and \code{qr.qty} return \code{Q \%*\% y} and ! Undefined control sequence. l.27512 \code{qr.qy} and \code {qr.qty} return \code{Q \%*\% y} and ! Undefined control sequence. l.27512 ...e{qr.qy} and \code{qr.qty} return \code {Q \%*\% y} and ! Undefined control sequence. l.27513 \code {t(Q) \%*\% y}, where \code{Q} is the (complete) \eqn{\bold{Q}}... ! Undefined control sequence. l.27513 \code{t(Q) \%*\% y}, where \code {Q} is the (complete) \eqn{\bold{Q}}... ! Undefined control sequence. l.27513 ..., where \code{Q} is the (complete) \eqn {\bold{Q}}{} matrix. ! Undefined control sequence. l.27513 ...e \code{Q} is the (complete) \eqn{\bold {Q}}{} matrix. ! Undefined control sequence. l.27515 All the above functions keep \code {dimnames} (and \code{names}) of ! Undefined control sequence. l.27515 ...nctions keep \code{dimnames} (and \code {names}) of ! Undefined control sequence. l.27516 \code {x} and \code{y} if there are any. ! Undefined control sequence. l.27516 \code{x} and \code {y} if there are any. ! Undefined control sequence. l.27518 \code {solve.qr} is the method for \code{\LinkA{solve}{solve}} for \c... [267] Underfull \hbox (badness 10000) in paragraph at lines 494--497 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6 ! Undefined control sequence. l.27518 \code{solve.qr} is the method for \code {\LinkA{solve}{solve}} for \c... ! Undefined control sequence. l.27518 ...olve.qr} is the method for \code{\LinkA {solve}{solve}} for \code{... ! Undefined control sequence. l.27518 ...r \code{\LinkA{solve}{solve}} for \code {qr} objects. ! Undefined control sequence. l.27519 \code {qr.solve} solves systems of equations via the QR decomposition: ! Undefined control sequence. l.27520 if \code {a} is a QR decomposition it is the same as \code{solve.qr}, ! Undefined control sequence. l.27520 ...R decomposition it is the same as \code {solve.qr}, ! Undefined control sequence. l.27521 but if \code {a} is a rectangular matrix the QR decomposition is ! Undefined control sequence. l.27525 \code {is.qr} returns \code{TRUE} if \code{x} is a \code{\LinkA{list}... ! Undefined control sequence. l.27525 \code{is.qr} returns \code {TRUE} if \code{x} is a \code{\LinkA{list}... ! Undefined control sequence. l.27525 \code{is.qr} returns \code{TRUE} if \code {x} is a \code{\LinkA{list}... ! Undefined control sequence. l.27525 ...urns \code{TRUE} if \code{x} is a \code {\LinkA{list}{list}} ! Undefined control sequence. l.27525 ...ode{TRUE} if \code{x} is a \code{\LinkA {list}{list}} ! Undefined control sequence. l.27526 and \code {\LinkA{inherits}{inherits}} from \code{"qr"}. ! Undefined control sequence. l.27526 and \code{\LinkA {inherits}{inherits}} from \code{"qr"}. ! Undefined control sequence. l.27526 ...{\LinkA{inherits}{inherits}} from \code {"qr"}. ! Undefined control sequence. l.27528 ...ossible to coerce objects to mode \code {"qr"}. Objects ! Undefined control sequence. l.27531 ...terface is restricted to matrices \code {x} with less ! Undefined control sequence. l.27532 than \eqn {2^{31}}{} elements. ! Missing $ inserted. $ l.27532 than \eqn{2^ {31}}{} elements. ! Extra }, or forgotten $. l.27532 than \eqn{2^{31}} {} elements. ! Missing $ inserted. $ l.27533 Underfull \hbox (badness 1742) in paragraph at lines 27531--27533 []\OT1/cmr/m/n/10 The LIN-PACK in-ter-face is re-stricted to ma-tri-ces x with less than ! Undefined control sequence. l.27534 \code {qr.fitted} and \code{qr.resid} only support the LINPACK interf... ! Undefined control sequence. l.27534 \code{qr.fitted} and \code {qr.resid} only support the LINPACK interf... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27539 \end{Details} ! Missing } inserted. } l.27539 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27541 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27545 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27546 \item[\code{qr}] a matrix with the same dimensions as \code{x}. ! Undefined control sequence. l.27546 ...atrix with the same dimensions as \code {x}. ! Undefined control sequence. l.27547 The upper triangle contains the \eqn {\bold{R}}{} of the decomposition ! Undefined control sequence. l.27547 The upper triangle contains the \eqn{\bold {R}}{} of the decomposition ! Undefined control sequence. l.27548 ...iangle contains information on the \eqn {\bold{Q}}{} of ! Undefined control sequence. l.27548 ... contains information on the \eqn{\bold {Q}}{} of ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27551 \item[\code{qraux}] a vector of length \code{ncol(x)} which contains ! Undefined control sequence. l.27551 ...[\code{qraux}] a vector of length \code {ncol(x)} which contains ! Undefined control sequence. l.27552 additional information on \eqn {\bold{Q}}{}. ! Undefined control sequence. l.27552 additional information on \eqn{\bold {Q}}{}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27553 \item[\code{rank}] the rank of \code{x} as computed by the decomposi... ! Undefined control sequence. l.27553 \item[\code{rank}] the rank of \code {x} as computed by the decomposi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27555 \item[\code{pivot}] information on the pivoting strategy used during ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27558 \end{ldescription} ! Undefined control sequence. l.27560 \code {"useLAPACK"} with value \code{TRUE}. ! Undefined control sequence. l.27560 \code{"useLAPACK"} with value \code {TRUE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27561 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27563 \begin{Section} {\code{*)}~ \code{dqrdc2} instead of LINPACK's DQRDC} ! Undefined control sequence. l.27563 \begin{Section}{\code {]*)}~ \code{dqrdc2} instead of LINPACK's DQRDC} ! Undefined control sequence. l.27563 \begin{Section}{\code{*)}~ \code {dqrdc2} instead of LINPACK's DQRDC} ! Undefined control sequence. l.27564 In the (default) LINPACK case (\code {LAPACK = FALSE}), \code{qr()} ! Undefined control sequence. l.27564 ...ACK case (\code{LAPACK = FALSE}), \code {qr()} ! Undefined control sequence. l.27566 `\code {dqrdc2}'. It differs by using the tolerance \code{tol} ! Undefined control sequence. l.27566 ...It differs by using the tolerance \code {tol} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27571 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27573 \begin{Note} \relax ! Undefined control sequence. l.27576 (\code {\LinkA{eigen}{eigen}}). See \code{\LinkA{det}{det}}. ! Undefined control sequence. l.27576 (\code{\LinkA {eigen}{eigen}}). See \code{\LinkA{det}{det}}. ! Undefined control sequence. l.27576 (\code{\LinkA{eigen}{eigen}}). See \code {\LinkA{det}{det}}. ! Undefined control sequence. l.27576 ...inkA{eigen}{eigen}}). See \code{\LinkA {det}{det}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27580 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27582 \begin{Source} \relax ! Undefined control sequence. l.27583 For \code {qr}, the LINPACK routine \code{DQRDC} (but modified to ! Undefined control sequence. l.27583 For \code{qr}, the LINPACK routine \code {DQRDC} (but modified to ! Undefined control sequence. l.27584 \code {dqrdc2}(*)) and the LAPACK ! Undefined control sequence. l.27585 routines \code {DGEQP3} and \code{ZGEQP3}. Further LINPACK and LAPACK ! Undefined control sequence. l.27585 routines \code{DGEQP3} and \code {ZGEQP3}. Further LINPACK and LAPACK ! Undefined control sequence. l.27586 routines are used for \code {qr.coef}, \code{qr.qy} and \code{qr.aty}. ! Undefined control sequence. l.27586 ...ines are used for \code{qr.coef}, \code {qr.qy} and \code{qr.aty}. ! Undefined control sequence. l.27586 ... \code{qr.coef}, \code{qr.qy} and \code {qr.aty}. ! Undefined control sequence. l.27588 LAPACK and LINPACK are from \url {http://www.netlib.org/lapack} and ! Undefined control sequence. l.27589 \url {http://www.netlib.org/linpack} and their guides are listed ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27591 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27593 \begin{References} \relax ! Undefined control sequence. l.27597 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.27597 ...ttp://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.27597 ....netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.27598 Underfull \hbox (badness 1817) in paragraph at lines 27588--27598 []\OT1/cmr/m/n/10 LAPACK and LIN-PACK are from http://www.netlib.org/lapack and ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27605 \end{References} ! Missing } inserted. } l.27605 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27607 \begin{SeeAlso} \relax ! Undefined control sequence. l.27608 \code {\LinkA{qr.Q}{qr.Q}}, \code{\LinkA{qr.R}{qr.R}}, \code{\LinkA... ! Undefined control sequence. l.27608 \code{\LinkA {qr.Q}{qr.Q}}, \code{\LinkA{qr.R}{qr.R}}, \code{\LinkA... ! Undefined control sequence. l.27608 \code{\LinkA{qr.Q}{qr.Q}}, \code {\LinkA{qr.R}{qr.R}}, \code{\LinkA... ! Undefined control sequence. l.27608 \code{\LinkA{qr.Q}{qr.Q}}, \code{\LinkA {qr.R}{qr.R}}, \code{\LinkA... ! Undefined control sequence. l.27608 ...Q}}, \code{\LinkA{qr.R}{qr.R}}, \code {\LinkA{qr.X}{qr.X}} for ! Undefined control sequence. l.27608 ...code{\LinkA{qr.R}{qr.R}}, \code{\LinkA {qr.X}{qr.X}} for ! Undefined control sequence. l.27610 \code {\LinkA{lm.fit}{lm.fit}}, \code{\LinkA{lsfit}{lsfit}}, ! Undefined control sequence. l.27610 \code{\LinkA {lm.fit}{lm.fit}}, \code{\LinkA{lsfit}{lsfit}}, ! Undefined control sequence. l.27610 \code{\LinkA{lm.fit}{lm.fit}}, \code {\LinkA{lsfit}{lsfit}}, ! Undefined control sequence. l.27610 ...{\LinkA{lm.fit}{lm.fit}}, \code{\LinkA {lsfit}{lsfit}}, ! Undefined control sequence. l.27611 \code {\LinkA{eigen}{eigen}}, \code{\LinkA{svd}{svd}}. ! Undefined control sequence. l.27611 \code{\LinkA {eigen}{eigen}}, \code{\LinkA{svd}{svd}}. ! Undefined control sequence. l.27611 \code{\LinkA{eigen}{eigen}}, \code {\LinkA{svd}{svd}}. ! Undefined control sequence. l.27611 \code{\LinkA{eigen}{eigen}}, \code{\LinkA {svd}{svd}}. ! Undefined control sequence. l.27613 \code {\LinkA{det}{det}} (using \code{qr}) to compute the determinant... ! Undefined control sequence. l.27613 \code{\LinkA {det}{det}} (using \code{qr}) to compute the determinant... [268] ! Undefined control sequence. l.27613 \code{\LinkA{det}{det}} (using \code {qr}) to compute the determinant... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27614 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27616 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27617 \begin{ExampleCode} ! You can't use `macro parameter character #' in math mode. l.27620 qr(h9)$rank # --> only 7 ! You can't use `macro parameter character #' in horizontal mode. l.27622 qrh9$rank # --> 9 ! You can't use `macro parameter character #' in horizontal mode. l.27623 # #-- Solve linear equation system H %*% x = y : ! You can't use `macro parameter character #' in horizontal mode. l.27623 ## -- Solve linear equation system H %*% x = y : ! You can't use `macro parameter character #' in horizontal mode. l.27625 x <- qr.solve(h9, y, tol = 1e-10) # or equivalently : ! You can't use `macro parameter character #' in horizontal mode. l.27626 x <- qr.coef(qrh9, y) # -- is == but much better than ! You can't use `macro parameter character #' in horizontal mode. l.27627 # -- solve(h9) %*% y ! You can't use `macro parameter character #' in vertical mode. l.27631 # # overdetermined system ! You can't use `macro parameter character #' in vertical mode. l.27631 ## overdetermined system ! You can't use `macro parameter character #' in horizontal mode. l.27634 qr.solve(A, b) # or solve(qr(A), b) ! You can't use `macro parameter character #' in horizontal mode. l.27636 # this is a least-squares solution, cf. lm(b ~ 0 + A) ! You can't use `macro parameter character #' in vertical mode. l.27638 # # underdetermined system ! You can't use `macro parameter character #' in vertical mode. l.27638 ## underdetermined system ! You can't use `macro parameter character #' in horizontal mode. l.27643 # solutions will have one zero, not necessarily the same one ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27644 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27645 \end{Examples} ! Undefined control sequence. l.27646 \HeaderA {QR.Auxiliaries}{Reconstruct the Q, R, or X Matrices from a ... ! Undefined control sequence. l.27647 \aliasA {qr.Q}{QR.Auxiliaries}{qr.Q} ! Undefined control sequence. l.27648 \aliasA {qr.R}{QR.Auxiliaries}{qr.R} ! Undefined control sequence. l.27649 \aliasA {qr.X}{QR.Auxiliaries}{qr.X} ! Undefined control sequence. l.27650 \keyword {algebra}{QR.Auxiliaries} ! Undefined control sequence. l.27651 \keyword {array}{QR. Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm Lit-er-a-ture Clas-si-fi-ca-tion Sys-tem, [][]@texttt https://www.aeawe b.org/econlit/jelCodes.php[][][]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm or `@texttt Classification/MSC[]@textrm '[] or `@texttt Classification/ MSC-2010[]@textrm '[] (the Math-e-mat-ics Sub-ject [7Auxiliaries} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27653 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27656 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27658 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27664 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27666 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27667 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27668 \item[\code{qr}] object representing a QR decomposition. This will ! Undefined control sequence. l.27669 ...have come from a previous call to \code {\LinkA{qr}{qr}} or ! Undefined control sequence. l.27669 ...me from a previous call to \code{\LinkA {qr}{qr}} or ! Undefined control sequence. l.27670 \code {\LinkA{lsfit}{lsfit}}. ! Undefined control sequence. l.27670 \code{\LinkA {lsfit}{lsfit}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27671 \item[\code{complete}] logical expression of length 1. Indicates wh... ! Undefined control sequence. l.27672 ...rary orthogonal completion of the \eqn {\bold{Q}}{} or ! Undefined control sequence. l.27672 ...orthogonal completion of the \eqn{\bold {Q}}{} or ! Undefined control sequence. l.27673 \eqn {\bold{X}}{} matrices is to be made, or whether the \eqn{\bold{R... ! Undefined control sequence. l.27673 \eqn{\bold {X}}{} matrices is to be made, or whether the \eqn{\bold{R... ! Undefined control sequence. l.27673 ...ices is to be made, or whether the \eqn {\bold{R}}{} ! Undefined control sequence. l.27673 ...s to be made, or whether the \eqn{\bold {R}}{} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27676 \item[\code{ncol}] integer in the range \code{1:nrow(qr\$qr)}. The ... ! Undefined control sequence. l.27676 ...\code{ncol}] integer in the range \code {1:nrow(qr\$qr)}. The number ! Undefined control sequence. l.27677 of columns to be in the reconstructed \eqn {\bold{X}}{}. The default ! Undefined control sequence. l.27677 ...s to be in the reconstructed \eqn{\bold {X}}{}. The default ! Undefined control sequence. l.27678 when \code {complete} is \code{FALSE} is the first ! Undefined control sequence. l.27678 when \code{complete} is \code {FALSE} is the first ! Undefined control sequence. l.27679 \code {min(ncol(X), nrow(X))} columns of the original \eqn{\bold{X}}{} ! Undefined control sequence. l.27679 ... nrow(X))} columns of the original \eqn {\bold{X}}{} ! Undefined control sequence. l.27679 ...X))} columns of the original \eqn{\bold {X}}{} ! Undefined control sequence. l.27681 \code {complete} is \code{TRUE} is a square matrix with the original ! Undefined control sequence. l.27681 \code{complete} is \code {TRUE} is a square matrix with the original ! Undefined control sequence. l.27682 \eqn {\bold{X}}{} in the first \code{ncol(X)} columns and an arbitrary ! Undefined control sequence. l.27682 \eqn{\bold {X}}{} in the first \code{ncol(X)} columns and an arbitrary ! Undefined control sequence. l.27682 \eqn{\bold{X}}{} in the first \code {ncol(X)} columns and an arbitrary ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27685 \item[\code{Dvec}] vector (not matrix) of diagonal values. Each col... ! Undefined control sequence. l.27686 the returned \eqn {\bold{Q}}{} will be multiplied by the corresponding ! Undefined control sequence. l.27686 the returned \eqn{\bold {Q}}{} will be multiplied by the corresponding ! Undefined control sequence. l.27687 diagonal value. Defaults to all \code {1}s. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27688 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27689 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27691 \begin{Value} ! Undefined control sequence. l.27692 \code {qr.X} returns \eqn{\bold{X}}{}, the original matrix from ! Undefined control sequence. l.27692 \code{qr.X} returns \eqn {\bold{X}}{}, the original matrix from ! Undefined control sequence. l.27692 \code{qr.X} returns \eqn{\bold {X}}{}, the original matrix from ! Undefined control sequence. l.27693 ... object was constructed, provided \code ]{ncol(X) <= nrow(X)}. ! Undefined control sequence. l.27694 If \code {complete} is \code{TRUE} or the argument \code{ncol} is gre... ! Undefined control sequence. l.27694 If \code{complete} is \code {TRUE} or the argument \code{ncol} is gre... ! Undefined control sequence. l.27694 ...e} is \code{TRUE} or the argument \code {ncol} is greater than ! Undefined control sequence. l.27695 \code {ncol(X)}, additional columns from an arbitrary orthogonal ! Undefined control sequence. l.27696 (unitary) completion of \code {X} are returned. ! Undefined control sequence. l.27698 \code {qr.Q} returns part or all of \bold{Q}, the order-nrow(X) ! Undefined control sequence. l.27698 \code{qr.Q} returns part or all of \bold {Q}, the order-nrow(X) ! Undefined control sequence. l.27699 ...ry) transformation represented by \code {qr}. If ! Undefined control sequence. l.27700 \code {complete} is \code{TRUE}, \bold{Q} has \code{nrow(X)} columns. ! Undefined control sequence. l.27700 \code{complete} is \code {TRUE}, \bold{Q} has \code{nrow(X)} columns. ! Undefined control sequence. l.27700 \code{complete} is \code{TRUE}, \bold {Q} has \code{nrow(X)} columns. ! Undefined control sequence. l.27700 ...ete} is \code{TRUE}, \bold{Q} has \code {nrow(X)} columns. ! Undefined control sequence. l.27701 If \code {complete} is \code{FALSE}, \bold{Q} has \code{ncol(X)} ! Undefined control sequence. l.27701 If \code{complete} is \code {FALSE}, \bold{Q} has \code{ncol(X)} ! Undefined control sequence. l.27701 If \code{complete} is \code{FALSE}, \bold {Q} has \code{ncol(X)} ! Undefined control sequence. l.27701 ...te} is \code{FALSE}, \bold{Q} has \code {ncol(X)} ! Undefined control sequence. l.27702 columns. When \code {Dvec} is specified, each column of \bold{Q} is ! Undefined control sequence. l.27702 ...vec} is specified, each column of \bold {Q} is ! Undefined control sequence. l.27703 ...ied by the corresponding value in \code {Dvec}. ! Undefined control sequence. l.27705 Note that \code {qr.Q(qr, *)} is a special case of ! Undefined control sequence. l.27706 \code {\LinkA{qr.qy}{qr.qy}(qr, y)} (with a ``diagonal'' \code{y}), and ! Undefined control sequence. l.27706 \code{\LinkA {qr.qy}{qr.qy}(qr, y)} (with a ``diagonal'' \code{y}), and ! Undefined control sequence. l.27706 ....qy}(qr, y)} (with a ``diagonal'' \code {y}), and ! Undefined control sequence. l.27707 \code {qr.X(qr, *)} is basically \code{\LinkA{qr.qy}{qr.qy}(qr, R)} (... ! Undefined control sequence. l.27707 \code{qr.X(qr, *)} is basically \code {\LinkA{qr.qy}{qr.qy}(qr, R)} (... ! Undefined control sequence. l.27707 ...{qr.X(qr, *)} is basically \code{\LinkA {qr.qy}{qr.qy}(qr, R)} (ap... ! Undefined control sequence. l.27708 pivoting and \code {dimnames} setting). ! Undefined control sequence. l.27710 \code {qr.R} returns \bold{R}. This may be pivoted, e.g., if ! Undefined control sequence. l.27710 \code{qr.R} returns \bold {R}. This may be pivoted, e.g., if ! Undefined control sequence. l.27711 \code {a <- qr(x)} then \code{x[, a\$pivot]} = \bold{QR}. The number of ! Undefined control sequence. l.27711 \code{a <- qr(x)} then \code {x[, a\$pivot]} = \bold{QR}. The number of ! Undefined control sequence. l.27711 ...r(x)} then \code{x[, a\$pivot]} = \bold {QR}. The number of ! Undefined control sequence. l.27712 rows of \bold {R} is either \code{nrow(X)} or \code{ncol(X)} (and may ! Undefined control sequence. l.27712 rows of \bold{R} is either \code {nrow(X)} or \code{ncol(X)} (and may ! Undefined control sequence. l.27712 ...ld{R} is either \code{nrow(X)} or \code {ncol(X)} (and may ! Undefined control sequence. l.27713 depend on whether \code {complete} is \code{TRUE} or \code{FALSE}). ! Undefined control sequence. l.27713 depend on whether \code{complete} is \code {TRUE} or \code{FALSE}). ! Undefined control sequence. l.27713 ...\code{complete} is \code{TRUE} or \code {FALSE}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27714 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27716 \begin{SeeAlso} \relax ! Undefined control sequence. l.27717 \code {\LinkA{qr}{qr}}, ! Undefined control sequence. l.27717 \code{\LinkA {qr}{qr}}, ! Undefined control sequence. l.27718 \code {\LinkA{qr.qy}{qr.qy}}. ! Undefined control sequence. l.27718 \code{\LinkA {qr.qy}{qr.qy}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27719 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27721 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27722 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.27723 p <- ncol(x <- LifeCycleSavings[, -1]) # not the 'sr' ! You can't use `macro parameter character #' in horizontal mode. l.27724 qrstr <- qr(x) # dim(x) == c(n,p) ! You can't use `macro parameter character #' in math mode. l.27725 qrstr $ rank # = 4 = p ! You can't use `macro parameter character #' in math mode. l.27726 Q <- qr.Q(qrstr) # dim(Q) == dim(x) ! You can't use `macro parameter character #' in math mode. l.27727 R <- qr.R(qrstr) # dim(R) == ncol(x) ! You can't use `macro parameter character #' in math mode. l.27728 X <- qr.X(qrstr) # X == x ! You can't use `macro parameter character #' in math mode. l.27729 range(X - as.matrix(x)) # ~ < 6e-12 ! You can't use `macro parameter character #' in math mode. l.27730 # # X == Q %*% R if there has been no pivoting, as here: ! You can't use `macro parameter character #' in math mode. l.27730 ## X == Q %*% R if there has been no pivoting, as here: ! Missing $ inserted. $ l.27733 [269] [8 ! You can't use `macro parameter character #' in vertical mode. l.27734 # example of pivoting ! You can't use `macro parameter character #' in horizontal mode. l.27738 x # is singular, columns "b2" and "c3" are "extra" ! You can't use `macro parameter character #' in horizontal mode. l.27740 zapsmall(qr.R(a)) # columns are int b1 c1 c2 b2 c3 ! You can't use `macro parameter character #' in horizontal mode. l.27742 pivI <- sort.list(a$pivot) # the inverse permutation ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27747 \end{ExampleCode} ! Missing $ inserted. $ l.27747 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27748 \end{Examples} ! Undefined control sequence. l.27749 \HeaderA {quit}{Terminate an R Session}{quit} ! Undefined control sequence. l.27750 \aliasA {.Last}{quit}{.Last} ! Undefined control sequence. l.27751 \methaliasA {.Last.sys}{quit}{.Last.sys} ! Undefined control sequence. l.27752 \aliasA {q}{quit}{q} ! Undefined control sequence. l.27753 \keyword {environment}{quit} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27755 \begin{Description} \relax ! Undefined control sequence. l.27756 The function \code {quit} or its alias \code{q} terminate the current ! Undefined control sequence. l.27756 ...function \code{quit} or its alias \code {q} terminate the current ! Undefined control sequence. l.27757 \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27758 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27760 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27765 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27767 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27768 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.27769 \item[\code{save}] a character string indicating whether the environ... ! Undefined control sequence. l.27770 (workspace) should be saved, one of \code {"no"}, \code{"yes"}, ! Undefined control sequence. l.27770 ...uld be saved, one of \code{"no"}, \code {"yes"}, ! Undefined control sequence. l.27771 \code {"ask"} or \code{"default"}. ! Undefined control sequence. l.27771 \code{"ask"} or \code {"default"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27772 \item[\code{status}] the (numerical) error status to be returned to the ! Undefined control sequence. l.27773 ..., where relevant. Conventionally \code {0} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27775 \item[\code{runLast}] should \code{.Last()} be executed? ! Undefined control sequence. l.27775 \item[\code{runLast}] should \code {.Last()} be executed? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27776 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27777 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27779 \begin{Details} \relax ! Undefined control sequence. l.27780 \code {save} must be one of \code{"no"}, \code{"yes"}, ! Undefined control sequence. l.27780 \code{save} must be one of \code {"no"}, \code{"yes"}, ! Undefined control sequence. l.27780 ...save} must be one of \code{"no"}, \code {"yes"}, ! Undefined control sequence. l.27781 \code {"ask"} or \code{"default"}. In the first case the workspace ! Undefined control sequence. l.27781 \code{"ask"} or \code {"default"}. In the first case the workspace ! Undefined control sequence. l.27787 ...\emph{before} normal termination, \code {.Last()} is ! Undefined control sequence. l.27788 executed if the function \code {.Last} exists and \code{runLast} is ! Undefined control sequence. l.27788 ... function \code{.Last} exists and \code {runLast} is ! Undefined control sequence. l.27789 ...ctive use there are errors in the \code {.Last} ! Undefined control sequence. l.27792 \code {.Last.sys()}, which is run after \code{.Last()} if ! Undefined control sequence. l.27792 ...{.Last.sys()}, which is run after \code {.Last()} if ! Undefined control sequence. l.27793 \code {runLast} is true. ! Undefined control sequence. l.27795 ...ly what happens at termination of an \R {} session depends on the ! Undefined control sequence. l.27797 \code {.Last()} and \code{.Last.sys()} (unless \code{runLast} is ! Undefined control sequence. l.27797 \code{.Last()} and \code {.Last.sys()} (unless \code{runLast} is ! Undefined control sequence. l.27797 ...)} and \code{.Last.sys()} (unless \code {runLast} is ! Undefined control sequence. l.27799 to save the session history: see \code {\LinkA{savehistory}{savehisto... ! Undefined control sequence. l.27799 ...e the session history: see \code{\LinkA {savehistory}{savehistory}... ! Undefined control sequence. l.27800 run any finalizers (see \code {\LinkA{reg.finalizer}{reg.finalizer}})... ! Undefined control sequence. l.27800 run any finalizers (see \code{\LinkA {reg.finalizer}{reg.finalizer}})... ! Undefined control sequence. l.27803 (e.g., from \code {.Last()} and device closure). ! Undefined control sequence. l.27805 Some error status values are used by \R {} itself. The default error ! Undefined control sequence. l.27806 ...interactive use effectively calls \code {q("no", 1, ! Undefined control sequence. l.27807 ...tatus 1. Error status 2 is used for \R {} ! Undefined control sequence. l.27812 Valid values of \code {status} are system-dependent, but \code{0:255} ! Undefined control sequence. l.27812 ...status} are system-dependent, but \code {0:255} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27815 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27817 \begin{Section} {Warning} ! Undefined control sequence. l.27818 The value of \code {.Last} is for the end user to control: as ! Undefined control sequence. l.27822 \code {\LinkA{reg.finalizer}{reg.finalizer}}. ! Undefined control sequence. l.27822 \code{\LinkA {reg.finalizer}{reg.finalizer}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27823 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27825 \begin{Note} \relax ! Undefined control sequence. l.27826 The \code {R.app} GUI on macOS has its own version of these functions ! Undefined control sequence. l.27827 ...ghtly different behaviour for the \code {save} argument (the ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27829 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27831 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27835 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27837 \begin{SeeAlso} \relax ! Undefined control sequence. l.27838 \code {\LinkA{.First}{.First}} for setting things on startup. ! Undefined control sequence. l.27838 \code{\LinkA {.First}{.First}} for setting things on startup. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27839 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27841 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27842 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.27843 # # Not run: ## Unix-flavour example ! You can't use `macro parameter character #' in horizontal mode. l.27843 ## Not run: ## Unix-flavour example ! You can't use `macro parameter character #' in horizontal mode. l.27843 ## Not run: # # Unix-flavour example ! You can't use `macro parameter character #' in horizontal mode. l.27843 ## Not run: ## Unix-flavour example ! You can't use `macro parameter character #' in horizontal mode. l.27845 graphics.off() # close devices before printing ! Undefined control sequence. l.27846 ... sending PDF graphics to the printer:\n ") ! Undefined control sequence. l.27848 cat("bye bye...\n ") ! You can't use `macro parameter character #' in horizontal mode. l.27851 # # End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.27851 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27852 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27853 \end{Examples} ! Undefined control sequence. l.27854 \HeaderA {Quotes}{Quotes}{Quotes} ! Undefined control sequence. l.27855 \aliasA {"}{Quotes}{"} ! Undefined control sequence. l.27856 \aliasA {'}{Quotes}{'} ! Undefined control sequence. l.27857 \aliasA {backquote}{Quotes}{backquote} ! Undefined control sequence. l.27858 \ali [9asA {backtick}{Quotes}{backtick} ! Undefined control sequence. l.27859 \aliasA {`}{Quotes}{`} ! Undefined control sequence. l.27860 \keyword {documentation}{Quotes} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27862 \begin{Description} \relax ! Undefined control sequence. l.27863 ...ns of the various uses of quoting in \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27864 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27866 \begin{Details} \relax ! Undefined control sequence. l.27867 ... of quotes are part of the syntax of \R {}: single and double ! Undefined control sequence. l.27868 ... and the backtick (or back quote, \samp {`}). In ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27871 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27873 \begin{Section} {Character constants} [270]] ! Undefined control sequence. l.27888 \Tabular {ll}{ ! Undefined control sequence. l.27889 \samp {\bsl{}n}& newline\\{} ! Undefined control sequence. l.27889 \samp{\bsl {}n}& newline\\{} ! Misplaced alignment tab character &. l.27889 \samp{\bsl{}n}& newline\\{} ! Undefined control sequence. l.27890 \samp {\bsl{}r}& carriage return\\{} ! Undefined control sequence. l.27890 \samp{\bsl {}r}& carriage return\\{} ! Misplaced alignment tab character &. l.27890 \samp{\bsl{}r}& carriage return\\{} ! Undefined control sequence. l.27891 \samp {\bsl{}t}& tab\\{} ! Undefined control sequence. l.27891 \samp{\bsl {}t}& tab\\{} ! Misplaced alignment tab character &. l.27891 \samp{\bsl{}t}& tab\\{} ! Undefined control sequence. l.27892 \samp {\bsl{}b}& backspace\\{} ! Undefined control sequence. l.27892 \samp{\bsl {}b}& backspace\\{} ! Misplaced alignment tab character &. l.27892 \samp{\bsl{}b}& backspace\\{} ! Undefined control sequence. l.27893 \samp {\bsl{}a}& alert (bell)\\{} ! Undefined control sequence. l.27893 \samp{\bsl {}a}& alert (bell)\\{} ! Misplaced alignment tab character &. l.27893 \samp{\bsl{}a}& alert (bell)\\{} ! Undefined control sequence. l.27894 \samp {\bsl{}f}& form feed\\{} ! Undefined control sequence. l.27894 \samp{\bsl {}f}& form feed\\{} ! Misplaced alignment tab character &. l.27894 \samp{\bsl{}f}& form feed\\{} ! Undefined control sequence. l.27895 \samp {\bsl{}v}& vertical tab\\{} ! Undefined control sequence. l.27895 \samp{\bsl {}v}& vertical tab\\{} ! Misplaced alignment tab character &. l.27895 \samp{\bsl{}v}& vertical tab\\{} ! Undefined control sequence. l.27896 \samp {\bsl{}\bsl{}}& backslash \samp{\bsl{}}\\{} ! Undefined control sequence. l.27896 \samp{\bsl {}\bsl{}}& backslash \samp{\bsl{}}\\{} ! Undefined control sequence. l.27896 \samp{\bsl{}\bsl {}}& backslash \samp{\bsl{}}\\{} ! Misplaced alignment tab character &. l.27896 \samp{\bsl{}\bsl{}}& backslash \samp{\bsl{}}\\{} ! Undefined control sequence. l.27896 \samp{\bsl{}\bsl{}}& backslash \samp {\bsl{}}\\{} ! Undefined control sequence. l.27896 \samp{\bsl{}\bsl{}}& backslash \samp{\bsl {}}\\{} ! Undefined control sequence. l.27897 \samp {\bsl{}'}& ASCII apostrophe \samp{'}\\{} ! Undefined control sequence. l.27897 \samp{\bsl {}'}& ASCII apostrophe \samp{'}\\{} ! Misplaced alignment tab character &. l.27897 \samp{\bsl{}'}& ASCII apostrophe \samp{'}\\{} ! Undefined control sequence. l.27897 \samp{\bsl{}'}& ASCII apostrophe \samp {'}\\{} ! Undefined control sequence. l.27898 \samp {\bsl{}"}& ASCII quotation mark \samp{"}\\{} ! Undefined control sequence. l.27898 \samp{\bsl {}"}& ASCII quotation mark \samp{"}\\{} ! Misplaced alignment tab character &. l.27898 \samp{\bsl{}"}& ASCII quotation mark \samp{"}\\{} ! Undefined control sequence. l.27898 \samp{\bsl{}"}& ASCII quotation mark \samp {"}\\{} ! Undefined control sequence. l.27899 \samp {\bsl{}`}& ASCII grave accent (backtick) \samp{`}\\{} ! Undefined control sequence. l.27899 \samp{\bsl {}`}& ASCII grave accent (backtick) \samp{`}\\{} ! Misplaced alignment tab character &. l.27899 \samp{\bsl{}`}& ASCII grave accent (backtick) \samp{`}\\{} ! Undefined control sequence. l.27899 ...`}& ASCII grave accent (backtick) \samp {`}\\{} ! Undefined control sequence. l.27900 \samp {\bsl{}nnn}& character with given octal code (1, 2 or 3 digits)... ! Undefined control sequence. l.27900 \samp{\bsl {}nnn}& character with given octal code (1, 2 or 3 digits)... ! Misplaced alignment tab character &. l.27900 \samp{\bsl{}nnn}& character with given octal code (1, 2 or 3 digits)... ! Undefined control sequence. l.27901 \samp {\bsl{}xnn}& character with given hex code (1 or 2 hex digits)\\{} ! Undefined control sequence. l.27901 \samp{\bsl {}xnn}& character with given hex code (1 or 2 hex digits)\\{} ! Misplaced alignment tab character &. l.27901 \samp{\bsl{}xnn}& character with given hex code (1 or 2 hex digits)\\{} ! Undefined control sequence. l.27902 \samp {\bsl{}unnnn}& Unicode character with given code (1--4 hex digi... ! Undefined control sequence. l.27902 \samp{\bsl {}unnnn}& Unicode character with given code (1--4 hex digi... ! Misplaced alignment tab character &. l.27902 \samp{\bsl{}unnnn}& Unicode character with given code (1--4 hex digi... ! Undefined control sequence. l.27903 \samp {\bsl{}Unnnnnnnn}& Unicode character with given code (1--8 hex ... ! Undefined control sequence. l.27903 \samp{\bsl {}Unnnnnnnn}& Unicode character with given code (1--8 hex ... ! Misplaced alignment tab character &. l.27903 \samp{\bsl{}Unnnnnnnn}& Unicode character with given code (1--8 hex ... ! Undefined control sequence. l.27905 ...native forms for the last two are \samp {\bsl{}u\{nnnn\}} and ! Undefined control sequence. l.27905 ...e forms for the last two are \samp{\bsl {}u\{nnnn\}} and ! Undefined control sequence. l.27906 \samp {\bsl{}U\{nnnnnnnn\}}. All except the Unicode escape sequences... ! Undefined control sequence. l.27906 \samp{\bsl {}U\{nnnnnnnn\}}. All except the Unicode escape sequences... ! Undefined control sequence. l.27907 ...when reading character strings by \code {\LinkA{scan}{scan}} ! Undefined control sequence. l.27907 ...ading character strings by \code{\LinkA {scan}{scan}} ! Undefined control sequence. l.27908 and \code {\LinkA{read.table}{read.table}} if \code{allowEscapes = TR... ! Undefined control sequence. l.27908 and \code{\LinkA {read.table}{read.table}} if \code{allowEscapes = TR... ! Undefined control sequence. l.27908 ...LinkA{read.table}{read.table}} if \code {allowEscapes = TRUE}. Un... ! Undefined control sequence. l.27915 These forms will also be used by \code {\LinkA{print.default}{print.d... ! Undefined control sequence. l.27915 ...forms will also be used by \code{\LinkA {print.default}{print.defa... ! Undefined control sequence. l.27919 (such as \samp {\bsl{}0}) for a nul will result in the string being ! Undefined control sequence. l.27919 (such as \samp{\bsl {}0}) for a nul will result in the string being ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27921 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27923 \begin{Section} {Names and Identifiers} ! Undefined control sequence. l.27925 (\code {.}) and the underscore. They must not start with a digit nor ! Undefined control sequence. l.27926 ...h a period followed by a digit. \LinkA {Reserved}{Reserved} ! Undefined control sequence. l.27933 directly in \R {} code. Almost always, other names can be used ! Undefined control sequence. l.27935 (\samp {`}), and \code{\LinkA{deparse}{deparse}} will normally use it... ! Undefined control sequence. l.27935 (\samp{`}), and \code {\LinkA{deparse}{deparse}} will normally use it... ! Undefined control sequence. l.27935 (\samp{`}), and \code{\LinkA {deparse}{deparse}} will normally use it... ! Undefined control sequence. l.27939 see \code {\LinkA{formula}{formula}}. ! Undefined control sequence. l.27939 see \code{\LinkA {formula}{formula}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27940 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27942 \begin{SeeAlso} \relax ! Undefined control sequence. l.27943 \code {\LinkA{Syntax}{Syntax}} for other aspects of the syntax. ! Undefined control sequence. l.27943 \code{\LinkA {Syntax}{Syntax}} for other aspects of the syntax. [271 [10] ! Undefined control sequence. l.27945 \code {\LinkA{sQuote}{sQuote}} for quoting English text. ! Undefined control sequence. l.27945 \code{\LinkA {sQuote}{sQuote}} for quoting English text. ! Undefined control sequence. l.27947 \code {\LinkA{shQuote}{shQuote}} for quoting OS commands. ! Undefined control sequence. l.27947 \code{\LinkA {shQuote}{shQuote}} for quoting OS commands. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27950 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27952 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27953 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.27958 # # Single quotes inside single-quoted strings need backslash-escaping. ! You can't use `macro parameter character #' in vertical mode. l.27958 ## Single quotes inside single-quoted strings need backslash-escaping. ! You can't use `macro parameter character #' in horizontal mode. l.27959 # # Ditto double quotes inside double-quoted strings. ! You can't use `macro parameter character #' in horizontal mode. l.27959 ## Ditto double quotes inside double-quoted strings. ! You can't use `macro parameter character #' in horizontal mode. l.27960 # # ! You can't use `macro parameter character #' in horizontal mode. l.27960 ## ! You can't use `macro parameter character #' in horizontal mode. l.27962 ... "\"It's alive!\", he screamed.") # same ! You can't use `macro parameter character #' in vertical mode. l.27964 # # Backslashes need doubling, or they have a special meaning. ! You can't use `macro parameter character #' in vertical mode. l.27964 ## Backslashes need doubling, or they have a special meaning. ! You can't use `macro parameter character #' in horizontal mode. l.27966 print(x) # shows it as above ("input-like") ! You can't use `macro parameter character #' in horizontal mode. l.27967 writeLines(x) # shows it as you like it ;-) ! You can't use `macro parameter character #' in vertical mode. l.27969 # # Single backslashes followed by a letter are used to denote ! You can't use `macro parameter character #' in vertical mode. l.27969 ## Single backslashes followed by a letter are used to denote ! You can't use `macro parameter character #' in horizontal mode. l.27970 # # special characters like tab(ulator)s and newlines: ! You can't use `macro parameter character #' in horizontal mode. l.27970 ## special characters like tab(ulator)s and newlines: ! Undefined control sequence. l.27971 x <- "long\tlines can be\nbroken with newlines" ! Undefined control sequence. l.27971 x <- "long\tlines can be\nbroken with newlines" ! You can't use `macro parameter character #' in horizontal mode. l.27972 writeLines(x) # see also ?strwrap ! You can't use `macro parameter character #' in vertical mode. l.27974 # # Backticks are used for non-standard variable names. ! You can't use `macro parameter character #' in vertical mode. l.27974 ## Backticks are used for non-standard variable names. ! You can't use `macro parameter character #' in horizontal mode. l.27975 # # (See make.names and ?Reserved for what counts as ! You can't use `macro parameter character #' in horizontal mode. l.27975 ## (See make.names and ?Reserved for what counts as ! You can't use `macro parameter character #' in horizontal mode. l.27976 # # non-standard.) ! You can't use `macro parameter character #' in horizontal mode. l.27976 ## non-standard.) ! Missing $ inserted. $ l.27981 ! You can't use `macro parameter character #' in vertical mode. l.27982 # # Backslashes followed by up to three numbers are interpreted as ! You can't use `macro parameter character #' in vertical mode. l.27982 ## Backslashes followed by up to three numbers are interpreted as ! You can't use `macro parameter character #' in horizontal mode. l.27983 # # octal notation for ASCII characters. ! You can't use `macro parameter character #' in horizontal mode. l.27983 ## octal notation for ASCII characters. ! Undefined control sequence. l.27984 "\1 10\145\154\154\157\40\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\1 45\154\154\157\40\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\1 54\154\157\40\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\1 54\157\40\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\1 57\40\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\4 0\127\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\40\1 27\157\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\40\127\1 57\162\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\40\127\157\1 62\154\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\40\127\157\162\1 54\144\41" ! Undefined control sequence. l.27984 "\110\145\154\154\157\40\127\157\162\154\1 44\41" ! Undefined control sequence. l.27984 ...45\154\154\157\40\127\157\162\154\144\4 1" ! You can't use `macro parameter character #' in vertical mode. l.27986 # # \x followed by up to two numbers is interpreted as ! You can't use `macro parameter character #' in vertical mode. l.27986 ## \x followed by up to two numbers is interpreted as ! Undefined control sequence. l.27986 ## \x followed by up to two numbers is interpreted as ! You can't use `macro parameter character #' in horizontal mode. l.27987 # # hexadecimal notation for ASCII characters. ! You can't use `macro parameter character #' in horizontal mode. l.27987 ## hexadecimal notation for ASCII characters. ! Undefined control sequence. l.27988 (hw1 <- "\x 48\x65\x6c\x6c\x6f\x20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x 65\x6c\x6c\x6f\x20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x65\x 6c\x6c\x6f\x20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x65\x6c\x 6c\x6f\x20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x65\x6c\x6c\x 6f\x20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x65\x6c\x6c\x6f\x 20\x57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 (hw1 <- "\x48\x65\x6c\x6c\x6f\x20\x 57\x6f\x72\x6c\x64\x21") ! Undefined control sequence. l.2798]8 (hw1 <- "\x48\x65\x6c\x6c\x6f\x20\x57\x 6f\x72\x6c\x64\x21") ! Undefined control sequence. l.27988 ... <- "\x48\x65\x6c\x6c\x6f\x20\x57\x6f\x 72\x6c\x64\x21") ! Undefined control sequence. l.27988 ..."\x48\x65\x6c\x6c\x6f\x20\x57\x6f\x72\x 6c\x64\x21") ! Undefined control sequence. l.27988 ...8\x65\x6c\x6c\x6f\x20\x57\x6f\x72\x6c\x 64\x21") ! Undefined control sequence. l.27988 ...5\x6c\x6c\x6f\x20\x57\x6f\x72\x6c\x64\x 21") ! You can't use `macro parameter character #' in vertical mode. l.27990 # # Mixing octal and hexadecimal in the same string is OK ! You can't use `macro parameter character #' in vertical mode. l.27990 ## Mixing octal and hexadecimal in the same string is OK ! Undefined control sequence. l.27991 (hw2 <- "\1 10\x65\154\x6c\157\x20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x 65\154\x6c\157\x20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\1 54\x6c\157\x20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\154\x 6c\157\x20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\154\x6c\1 57\x20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\154\x6c\157\x 20\127\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\154\x6c\157\x20\1 27\x6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 (hw2 <- "\110\x65\154\x6c\157\x20\127\x 6f\162\x6c\144\x21") ! Undefined control sequence. l.27991 ... <- "\110\x65\154\x6c\157\x20\127\x6f\1 62\x6c\144\x21") ! Undefined control sequence. l.27991 ..."\110\x65\154\x6c\157\x20\127\x6f\162\x 6c\144\x21") ! Undefined control sequence. l.27991 ...0\x65\154\x6c\157\x20\127\x6f\162\x6c\1 44\x21") ! Undefined control sequence. l.27991 ...5\154\x6c\157\x20\127\x6f\162\x6c\144\x 21") Underfull \hbox (badness 2393) in paragraph at lines 27990--27992 []\OT1/cmr/m/n/10 Mixing oc-tal and hex-adec-i-mal in the same string is OK (hw 2 <- ! You can't use `macro parameter character #' in vertical mode. l.27993 # # \u is also hexadecimal, but supported up to 4 numbers, ! You can't use `macro parameter character #' in vertical mode. l.27993 ## \u is also hexadecimal, but supported up to 4 numbers, ! You can't use `macro parameter character #' in horizontal mode. l.27994 # # using Unicode specification. In the previous example, ! You can't use `macro parameter character #' in horizontal mode. l.27994 ## using Unicode specification. In the previous example, ! You can't use `macro parameter character #' in horizontal mode. l.27995 # # you can simply replace \x with \u. ! You can't use `macro parameter character #' in horizontal mode. l.27995 ## you can simply replace \x with \u. ! Undefined control sequence. l.27995 ## you can simply replace \x with \u. ! You can't use `macro parameter character #' in vertical mode. l.27998 # # The last three are all identical to ! You can't use `macro parameter character #' in vertical mode. l.27998 ## The last three are all identical to ! You can't use `macro parameter character #' in vertical mode. l.28002 # # Using Unicode makes more sense for non-latin characters. ! You can't use `macro parameter character #' in vertical mode. l.28002 ## Using Unicode makes more sense for non-latin characters. Underfull \hbox (badness 1817) in paragraph at lines 28002--28004 []\OT1/cmr/m/n/10 Using Uni-code makes more sense for non-latin char-ac-ters. ( nn <- ! You can't use `macro parameter character #' in vertical mode. l.28005 # # Mixing \x and \u throws a _parse_ error (which is not catchable!) ! You can't use `macro parameter character #' in vertical mode. l.28005 ## Mixing \x and \u throws a _parse_ error (which is not catchable!) ! Undefined control sequence. l.28005 ## Mixing \x and \u throws a _parse_ error (which is not catchable!) ! Missing $ inserted. $ l.28005 ## Mixing \x and \u throws a _ parse_ error (which is not catchable!) ! You can't use `macro parameter character #' in math mode. l.28006 # # Not run: ! You can't use `macro parameter character #' in math mode. l.28006 ## Not run: ! Undefined control sequence. l.28007 "\x 48\u65\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 "\x48\u6 5\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u21" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 "\x48\u6 5\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u21" ! Undefined control sequence. l.28007 "\x48\u65\x 6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 "\x48\u65\x6c\u6 c\x6f\u20\x57\u6f\x72\u6c\x64\u21" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 "\x48\u65\x6c\u6 c\x6f\u20\x57\u6f\x72\u6c\x64\u21" ! Undefined control sequence. l.28007 "\x48\u65\x6c\u6c\x 6f\u20\x57\u6f\x72\u6c\x64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 "\x48\u65\x6c\u6c\x6f\u2 0\x57\u6f\x72\u6c\x64\u21" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 "\x48\u65\x6c\u6c\x6f\u2 0\x57\u6f\x72\u6c\x64\u21" ! Undefined control sequence. l.28007 "\x48\u65\x6c\u6c\x6f\u20\x 57\u6f\x72\u6c\x64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 "\x48\u65\x6c\u6c\x6f\u20\x57\u6 f\x72\u6c\x64\u21" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 "\x48\u65\x6c\u6c\x6f\u20\x57\u6 f\x72\u6c\x64\u21" ! Undefined control sequence. l.28007 "\x48\u65\x6c\u6c\x6f\u20\x57\u6f\x 72\u6c\x64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 "\x48\u65\x6c\u6c\x6f\u20\x57\u6f\x72\u6 c\x64\u21" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 "\x48\u65\x6c\u6c\x6f\u20\x57\u6f\x72\u6 c\x64\u21" ! Undefined control sequence. l.28007 ...8\u65\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x 64\u21" LaTeX Warning: Command \u invalid in math mode on input line 28007. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.28007 ...\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u2 1" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.28007 ...\x6c\u6c\x6f\u20\x57\u6f\x72\u6c\x64\u2 1" ! Missing $ inserted. $ l.28008 Underfull \hbox (badness 10000) in paragraph at lines 28005--28008 []\OT1/cmr/m/n/10 Mixing and []throws a $[]\OML/cmm/m/it/10 arse[]rror\OT1/cmr/ m/n/10 (\OML/cmm/m/it/10 whichisnotcatchable\OT1/cmr/m/n/10 !)\OML/cmm/m/it/10 Notrun \OT1/cmr/m/n/10 : ! You can't use `macro parameter character #' in vertical mode. l.28009 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.28009 ## End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.28010 # # --> Error: mixing Unicode and octal/hex escapes ..... ! You can't use `macro parameter character #' in horizontal mode. l.28010 ## --> Error: mixing Unicode and octal/hex escapes ..... ! You can't use `macro parameter character #' in vertical mode. l.28012 # # \U works like \u, but supports up to eight numbers. ! You can't use `macro parameter character #' in vertical mode. l.28012 ## \U works like \u, but supports up to eight numbers. ! Undefined control sequence. l.28012 ## \U works like \u, but supports up to eight numbers. ! You can't use `macro parameter character #' in horizontal mode. l.28013 # # So we can replace \u with \U in the previous example. ! You can't use `macro parameter character #' in horizontal mode. l.28013 ## So we can replace \u with \U in the previous example. ! Undefined control sequence. l.28013 ## So we can replace \u with \U in the previous example. ! Undefined control sequence. l.28014 n2 <- "\U 0126\U0119\U1114\U022d\U2001\U03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 n2 <- "\U0126\U 0119\U1114\U022d\U2001\U03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 n2 <- "\U0126\U0119\U 1114\U022d\U2001\U03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 n2 <- "\U0126\U0119\U1114\U 022d\U2001\U03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 n2 <- "\U0126\U0119\U1114\U022d\U 2001\U03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 n2 <- "\U0126\U0119\U1114\U022d\U2001\U 03e2\U0954\U0f3f\U13d3\U147b\... ! Undefined control sequence. l.28014 ..."\U0126\U0119\U1114\U022d\U2001\U03e2\U 0954\U0f3f\U13d3\U147b\U203c" ! Undefined control sequence. l.28014 ...6\U0119\U1114\U022d\U2001\U03e2\U0954\U 0f3f\U13d3\U147b\U203c" ! Undefined control sequence. l.28014 ...9\U1114\U022d\U2001\U03e2\U0954\U0f3f\U 13d3\U147b\U203c" ! Undefined control sequence. l.28014 ...4\U022d\U2001\U03e2\U0954\U0f3f\U13d3\U 147b\U203c" ! Undefined control sequence. l.28014 ...d\U2001\U03e2\U0954\U0f3f\U13d3\U147b\U 203c" ! You can't use `macro parameter character #' in vertical mode. l.28017 # # Under systems supporting multi-byte locales (and not Windows), ! You can't use `macro parameter character #' in vertical mode. l.28017 ## Under systems supporting multi-byte locales (and not Windows), ! You can't use `macro parameter character #' in horizontal mode. l.28018 # # \U also supports the rarer characters outside the usual 16^4 range. ! You can't use `macro parameter character #' in horizontal mode. l.28018 ## \U also supports the rarer characters outside the usual 16^4 range. ! Undefined control sequence. l.28018 ## \U also supports the rarer characters outside the usual 16^4 range. ! Missing $ inserted. $ l.28018 ... rarer characters outside the usual 16^ 4 range. ! You can't use `macro parameter character #' in math mode. l.28019 # # See the R language manual, ! You can't use `macro parameter character #' in math mode. l.28019 ## See the R language manual, ! You can't use `macro parameter character #' in math mode. l.28020 # # https://cran.r-project.org/doc/manuals/r-release/R-lang.html#Lite... ! You can't use `macro parameter character #' in math mode. l.28020 ## https://cran.r-project.org/doc/manuals/r-release/R-lang.html#Lite... ! You can't use `macro parameter character #' in math mode. l.28020 ....org/doc/manuals/r-release/R-lang.html# Literal-constants ! You can't use `macro parameter character #' in math mode. l.28021 # # and bug 16098 https://bugs.r-project.org/bugzilla3/show_bug.cgi?i... ! You can't use `macro parameter character #' in math mode. l.28021 ## and bug 16098 https://bugs.r-project.org/bugzilla3/show_bug.cgi?i... ! Undefined control sequence. l.28022 "\U 1d4d7" # On Windows this gives the incorrect value of "\Ud4d7" ! You can't use `macro parameter character #' in math mode. l.28022 "\U1d4d7" # On Windows this gives the incorrect value of "\Ud4d7" ! Undefined control sequence. l.28022 ... this gives the incorrect value of "\Ud 4d7" ! Missing $ inserted. $ l.28023 Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 []\OT1/cmr/m/n/10 Under sys-tems sup-port-ing multi-byte lo-cales (and not Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 \OT1/cmr/m/n/10 Win-dows), also sup-ports the rarer char-ac-ters out- Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 \OT1/cmr/m/n/10 side the usual 16$[]\OML/cmm/m/it/10 range:SeetheRlanguagemanua l; https \OT1/cmr/m/n/10 : Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 \OML/cmm/m/it/10 ==cran:r \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 project:org=doc =manuals=r \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 release=R \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 \OML/cmm/m/it/10 lang:htmlLiteral \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 constan tsandbug\OT1/cmr/m/n/10 16098\OML/cmm/m/it/10 https \OT1/cmr/m/n/10 : Underfull \hbox (badness 10000) in paragraph at lines 28017--28023 \OML/cmm/m/it/10 ==bugs:r \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 project:org=bug zilla\OT1/cmr/m/n/10 3\OML/cmm/m/it/10 =show[]ug:cgi\OT1/cmr/m/n/10 ?\OML/cmm/m /it/10 id \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.28024 # # nul characters (for terminating strings in C) are not allowed (pa... ! You can't use `macro parameter character #' in vertical mode. l.28024 ## nul characters (for terminating strings in C) are not allowed (pa... [272] Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11 ! You can't use `macro parameter character #' in horizontal mode. l.28025 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.28025 ## Not run: ! Undefined control sequence. l.28026 "foo\0 bar" # Error: nul character not allowed (line 1) ! You can't use `macro parameter character #' in horizontal mode. l.28026 "foo\0bar" # Error: nul character not allowed (line 1) ! You can't use `macro parameter character #' in horizontal mode. l.28027 "foo\u0000bar" # same error ! You can't use `macro parameter character #' in vertical mode. l.28029 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.28029 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28030 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28031 \end{Examples} ! Undefined control sequence. l.28032 \HeaderA {R.Version}{Version Information}{R.Version} ! Undefined control sequence. l.28033 \aliasA {R.version}{R.Version}{R.version} ! Undefined control sequence. l.28034 \methaliasA {R.version.string}{R.Version}{R.version.string} ! Undefined control sequence. l.28035 \aliasA {version}{R.Version}{version} ! Undefined control sequence. l.28036 \keyword {environment}{R.Version} ! Undefined control sequence. l.28037 \keyword {sysdata}{R.Version} ! Undefined control sequence. l.28038 \keyword {programming}{R.Version} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28040 \begin{Description} \relax ! Undefined control sequence. l.28041 \code {R.Version()} provides detailed information about the version of ! Undefined control sequence. l.28042 \R {} running. Underfull \hbox (badness 10000) in paragraph at lines 28029--28043 []\OT1/cmr/m/n/10 End(Not run) R.VersionVersion In-for-ma-tionR.Version Underfull \hbox (badness 10000) in paragraph at lines 28029--28043 \OT1/cmr/m/n/10 R.versionR.VersionR.version R.version.stringR.VersionR.version. string ver- Underfull \hbox (badness 10000) in paragraph at lines 28029--28043 \OT1/cmr/m/n/10 sionR.Versionversion en-vi-ron-mentR.Version sys-dataR.Version pro-gram- ! Undefined control sequence. l.28044 \code {R.version} is a variable (a \code{\LinkA{list}{list}}) holding... ! Undefined control sequence. l.28044 \code{R.version} is a variable (a \code {\LinkA{list}{list}}) holding... ! Undefined control sequence. l.28044 ....version} is a variable (a \code{\LinkA {list}{list}}) holding this ! Undefined control sequence. l.28045 information (and \code {version} is a copy of it for S compatibility). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28046 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28048 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28055 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28057 \begin{Details} \relax ! Undefined control sequence. l.28058 ... gives details of the OS under which \R {} was built, not the one ! Undefined control sequence. l.28060 \code {\LinkA{Sys.info}{Sys.info}}). ! Undefined control sequence. l.28060 \code{\LinkA {Sys.info}{Sys.info}}). ! Undefined control sequence. l.28063 ...ricks 10.9.4 identifies itself as \samp {darwin13.3.0}, Linux ! Undefined control sequence. l.28064 usually as \samp {linux-gnu} and Solaris 10 as \samp{solaris2.10}. ! Undefined control sequence. l.28064 ...samp{linux-gnu} and Solaris 10 as \samp {solaris2.10}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28065 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28067 \begin{Value} ! Undefined control sequence. l.28068 \code {R.Version} returns a list with character-string components ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28069 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28070 \item[\code{platform}] the platform for which \R{} was built. A tri... ! Undefined control sequence. l.28070 ...de{platform}] the platform for which \R {} was built. A triplet o... ! Undefined control sequence. l.28072 \code {"i686-unknown-linux-gnu"} or \code{"i386-pc-mingw32"}. ! Undefined control sequence. l.28072 \code{"i686-unknown-linux-gnu"} or \code {"i386-pc-mingw32"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28074 \item[\code{arch}] the architecture (CPU) \R{} was built on/for. ! Undefined control sequence. l.28074 ...[\code{arch}] the architecture (CPU) \R {} was built on/for. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28075 \item[\code{os}]] the underlying operating system. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28076 \item[\code{system}] CPU and OS, separated by a comma. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28077 \item[\code{status}] the status of the version (e.g., \code{"alpha"}) ! Undefined control sequence. l.28077 ... the status of the version (e.g., \code {"alpha"}) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28078 \item[\code{major}] the major version number ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28079 \item[\code{minor}] the minor version number, including the patchlevel ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28080 \item[\code{year}] the year the version was released ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28081 \item[\code{month}] the month the version was released ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28082 \item[\code{day}] the day the version was released ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28083 \item[\code{svn rev}] the Subversion revision number, which should b... ! Undefined control sequence. l.28084 \code {"unknown"} or a single number. (A range of numbers or a number ! Undefined control sequence. l.28085 with \samp {M} or \samp{S} appended indicates inconsistencies in the ! Undefined control sequence. l.28085 with \samp{M} or \samp {S} appended indicates inconsistencies in the ! Undefined control sequence. l.28086 sources used to build this version of \R {}.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28088 \item[\code{language}] always \code{"R"}. ! Undefined control sequence. l.28088 \item[\code{language}] always \code {"R"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28089 \item[\code{version.string}] a ! Undefined control sequence. l.28090 \code {\LinkA{character}{character}} string concatenating some of the... ! Undefined control sequence. l.28090 \code{\LinkA {character}{character}} string concatenating some of the... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28093 \end{ldescription} ! Undefined control sequence. l.28094 \code {R.version} and \code{version} are lists of class ! Undefined control sequence. l.28094 \code{R.version} and \code {version} are lists of class ! Undefined control sequence. l.28095 \code {"simple.list"} which has a \code{print} method. ! Undefined control sequence. l.28095 \code{"simple.list"} which has a \code {print} method. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28096 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28098 \begin{Note} \relax ! Undefined control sequence. l.28099 Do \emph{not} use \code {R.version\$os} to test the platform the ! Undefined control sequence. l.28100 code is running on: use \code {.Platform\$OS.type} instead. Slightly ! Undefined control sequence. l.28102 \code {R.version\$os}, as may different versions of \R{}. ! Undefined control sequence. l.28102 ...n\$os}, as may different versions of \R {}. ! Undefined control sequence. l.28104 \code {R.version.string} is a copy of \code{R.version\$version.string} ! Undefined control sequence. l.28104 \code{R.version.string} is a copy of \code {R.version\$version.string} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28106 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28108 \begin{SeeAlso} \relax ! Undefined control sequence. l.28109 \code {\LinkA{sessionInfo}{sessionInfo}} which provides additional in... ! Undefined control sequence. l.28109 \code{\LinkA {sessionInfo}{sessionInfo}} which provides additional in... ! Undefined control sequence. l.28110 \code {\LinkA{getRversion}{getRversion}} typically used inside R code, ! Undefined control sequence. l.28110 \code{\LinkA {getRversion}{getRversion}} typically used inside R code, ! Undefined control sequence. l.28111 \code {\LinkA{.Platform}{.Platform}}, \code{\LinkA{Sys.info}{Sys.info}}. ! Undefined control sequence. l.28111 \code{\LinkA {.Platform}{.Platform}}, \code{\LinkA{Sys.info}{Sys.info}}. ! Undefined control sequence. l.28111 \code{\LinkA{.Platform}{.Platform}}, \code {\LinkA{Sys.info}{Sys.info}}. ! Undefined control sequence. l.28111 ...kA{.Platform}{.Platform}}, \code{\LinkA {Sys.info}{Sys.info}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28112 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28114 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28115 \begin{ExampleCode} [273] ! You can't use `macro parameter character #' in math mode. l.28118 R.version$os # to check how lucky you are ... ! You can't use `macro parameter character #' in math mode. l.28119 plot(0) # any plot ! You can't use `macro parameter character #' in math mode. l.28120 ....string, side = 1, line = 4, adj = 1) # a useful bottom-right note ! Missing $ inserted. $ l.28121 Overfull \hbox (34.7632pt too wide) in paragraph at lines 28118--28121 []\OT1/cmr/m/n/10 R.version$\OML/cmm/m/it/10 ostocheckhowluckyyouare:::plot\OT1 /cmr/m/n/10 (0)\OML/cmm/m/it/10 anyplotmtext\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 R :version:string; side \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.28122 # # a good way to detect macOS: ! You can't use `macro parameter character #' in vertical mode. l.28122 ## a good way to detect macOS: ! Missing $ inserted. $ l.28123 if(grepl("^ darwin", R.version$os)) message("running on macOS") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28124 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28125 \end{Examples} ! Undefined control sequence. l.28126 \HeaderA {Random}{Random Number Generation}{Random} ! Undefined control sequence. l.28127 \aliasA {.Random.seed}{Random}{.Random.seed} ! Undefined control sequence. l.28128 \aliasA {RNG}{Random}{RNG} ! Undefined control sequence. l.28129 \aliasA {RNGkind}{Random}{RNGkind} ! Undefined control sequence. l.28130 \aliasA {RNGversion}{Random}{RNGversion} ! Undefined control sequence. l.28131 \aliasA {set.seed}{Random}{set.seed} ! Undefined control sequence. l.28132 \keyword {distribution}{Random} ! Undefined control sequence. l.28133 \keyword {sysdata}{Random} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28135 \begin{Description} \relax ! Undefined control sequence. l.28136 \code {.Random.seed} is an integer vector, containing the random number ! Undefined control sequence. l.28137 generator (RNG) \bold {state} for random number generation in \R{}. It ! Undefined control sequence. l.28137 ...ate} for random number generation in \R {}. It Underfull \hbox (badness 2050) in paragraph at lines 28122--28139 []\OT1/cmr/m/n/10 a good way to de-tect ma-cOS: if(grepl("$[]\OML/cmm/m/it/10 a rwin\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; R:version$\OT1/cmr/m/n/10 os)) mes- Underfull \hbox (badness 1931) in paragraph at lines 28122--28139 \OT1/cmr/m/n/10 sage("running on ma-cOS") Ran-dom-Ran-dom Num-ber Gen-er-a-ti onRan- Underfull \hbox (badness 1546) in paragraph at lines 28122--28139 \OT1/cmr/m/n/10 dom .Ran-dom.seedRandom.Random.seed RN-GRandom-RNG RNGkin-dRan- ! Undefined control sequence. l.28140 \code {RNGkind} is a more friendly interface to query or set the kind ! Undefined control sequence. l.28143 \code {RNGversion} can be used to set the random generators as they ! Undefined control sequence. l.28144 were in an earlier \R {} version (for reproducibility). ! Unde [12fined control sequence. l.28146 \code {set.seed} is the recommended way to specify seeds. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28147 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28149 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28157 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28159 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28160 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28161 \item[\code{kind}] character or \code{NULL}. If \code{kind} is a ch... ! Undefined control sequence. l.28161 \item[\code{kind}] character or \code {NULL}. If \code{kind} is a ch... ! Undefined control sequence. l.28161 ...d}] character or \code{NULL}. If \code {kind} is a character ! Undefined control sequence. l.28162 string, set \R {}'s RNG to the kind desired. Use \code{"default"} to ! Undefined control sequence. l.28162 ...}'s RNG to the kind desired. Use \code {"default"} to ! Undefined control sequence. l.28163 return to the \R {} default. See `Details' for the ! Undefined control sequence. l.28164 interpretation of \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28165 \item[\code{normal.kind}] character string or \code{NULL}. If it is... ! Undefined control sequence. l.28165 ...normal.kind}] character string or \code {NULL}. If it is a character ! Undefined control sequence. l.28166 ...method of Normal generation. Use \code {"default"} ! Undefined control sequence. l.28167 to return to the \R {} default. \code{NULL} makes no change. ! Undefined control sequence. l.28167 to return to the \R{} default. \code {NULL} makes no change. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28168 \item[\code{seed}] a single value, interpreted as an integer, or \co... ! Undefined control sequence. l.28168 ...ue, interpreted as an integer, or \code {NULL} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28170 \item[\code{vstr}] a character string containing a version number, ! Undefined control sequence. l.28171 e.g., \code {"1.6.2"} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28172 \item[\code{rng.kind}] integer code in \code{0:k} for the above \cod... ! Undefined control sequence. l.28172 ...[\code{rng.kind}] integer code in \code {0:k} for the above \code{... ! Undefined control sequence. l.28172 ... code in \code{0:k} for the above \code {kind}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28173 \item[\code{n1, n2, ...}] integers. See the details for how many ar... ! Undefined control sequence. l.28174 (which depends on \code {rng.kind}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28175 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28176 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28178 \begin{Details} \relax ! Undefined control sequence. l.28179 ...lable RNG kinds are given below. \code {kind} is ! Undefined control sequence. l.28181 \code {"Mersenne-Twister"}. ! Undefined control sequence. \code {"Wichmann-Hill"} l.28184 \item[\code{"Wichmann-Hill"}] ! Undefined control sequence. l.28185 The seed, \code {.Random.seed[-1] == r[1:3]} is an integer vector of ! Undefined control sequence. l.28186 length 3, where each \code {r[i]} is in \code{1:(p[i] - 1)}, where ! Undefined control sequence. l.28186 ...h 3, where each \code{r[i]} is in \code {1:(p[i] - 1)}, where ! Undefined control sequence. l.28187 \code {p} is the length 3 vector of primes, \code{p = (30269, 30307, ! Undefined control sequence. l.28187 ...is the length 3 vector of primes, \code {p = (30269, 30307, ! Undefined control sequence. l.28190 \eqn {6.9536 \times 10^{12}}{} (= ! Missing $ inserted. $ l.28190 \eqn{6.9536 \times 10^{12}}{} (= ! Extra }, or forgotten $. l.28190 \eqn{6.9536 \times 10^{12}} {} (= ! Undefined control sequence. l.28191 \code {prod(p-1)/4}, see \emph{Applied Statistics} (1984) ! Undefined control sequence. l.28192 \bold {33}, 123 which corrects the original article). ! Missing $ inserted. $ l.28193 ! Missing } inserted. } l.28193 Underfull \hbox (badness 3657) in paragraph at lines 28185--28193 []\OT1/cmr/m/n/10 The seed, .Random.seed[-1] == r[1:3] is an in-te- Underfull \hbox (badness 3179) in paragraph at lines 28185--28193 \OT1/cmr/m/n/10 Wichmann--Hill gen-er-a-tor has a cy-cle length of 6.9536 $\OMS /cmsy/m/n/10 ^^B\OT1/cmr/m/n/10 10[][](= Overfull \hbox (40.11267pt too wide) in paragraph at lines 28185--28193 []\OML/cmm/m/it/10 ; see[]\OT1/cmr/m/n/10 (1984)[]\OML/cmm/m/it/10 ; \OT1/cmr/m /n/10 123\OML/cmm/m/it/10 whichcorrectstheoriginalarticle\OT1/cmr/m/n/10 )\OML/ cmm/m/it/10 :[]$ ! Undefined control sequence. \code {"Marsaglia-Multicarry"}: l.28194 \item[\code{"Marsaglia-Multicarry"}:] ! Undefined control sequence. l.28196 ...a in his post to the mailing list \file {sci.stat.math}. ! Undefined control sequence. l.28197 It has a period of more than \eqn {2^{60}}{} and has passed ! Missing $ inserted. $ l.28197 It has a period of more than \eqn{2^ {60}}{} and has passed ! Extra }, or forgotten $. l.28197 It has a period of more than \eqn{2^{60}} {} and has passed ! Missing $ inserted. $ l.28200 ! Missing } inserted. } l.28200 Underfull \hbox (badness 10000) in paragraph at lines 28195--28200 []\OT1/cmr/m/n/10 A \OT1/cmr/m/it/10 multiply-with-carry \OT1/cmr/m/n/10 RNG is used, Underfull \hbox (badness 10000) in paragraph at lines 28195--28200 \OT1/cmr/m/n/10 as rec-om-mended by George Marsaglia in his post to the Underfull \hbox (badness 10000) in paragraph at lines 28195--28200 \OT1/cmr/m/n/10 mail-ing list sci.stat.math. It has a pe-riod of more than Overfull \hbox (80.98503pt too wide) in paragraph at lines 28195--28200 \OT1/cmr/m/n/10 2$[][]\OML/cmm/m/it/10 andhaspassedalltests\OT1/cmr/m/n/10 (\OM L/cmm/m/it/10 accordingtoMarsaglia\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :Theseedist wointegers\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 allvaluesallowed\OT1/cmr/m/n/10 )\O ML/cmm/m/it/10 :[]$ ! Undefined control sequence. \code {"Super-Duper"}: l.28201 \item[\code{"Super-Duper"}:] ! Undefined control sequence. l.28204 battery. It has a period of \eqn {\approx 4.6\times 10^{18}}{} for m... ! Missing $ inserted. $ l.28204 battery. It has a period of \eqn{\approx 4.6\times 10^{18}}{} for m... ! Extra }, or forgotten $. l.28204 ...riod of \eqn{\approx 4.6\times 10^{18}} {} for most initial seeds.... ! Missing $ inserted. $ l.28206 ! Missing } inserted. } l.28206 Underfull \hbox (badness 10000) in paragraph at lines 28202--28206 []\OT1/cmr/m/n/10 Marsaglia's fa-mous Super-Duper from the 70's. Underfull \hbox (badness 5667) in paragraph at lines 28202--28206 \OT1/cmr/m/n/10 This is the orig-i-nal ver-sion which does \OT1/cmr/m/it/10 not \OT1/cmr/m/n/10 pass the MTU- Underfull \hbox (badness 1242) in paragraph at lines 28202--28206 \OT1/cmr/m/n/10 PLE test of the Diehard bat-tery. It has a pe-riod of $\OMS/cms y/m/n/10 ^^Y \OT1/cmr/m/n/10 4\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 6 \OMS/cmsy/m/n /10 ^^B Overfull \hbox (42.24103pt too wide) in paragraph at lines 28202--28206 \OT1/cmr/m/n/10 10[][]\OML/cmm/m/it/10 formostinitialseeds:Theseedistwointegers \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 allvaluesallowedforthefirstseed \OT1/cmr/m/n/ 10 : [274]] ! Undefined control sequence. l.28210 ...ely. A one-to-one mapping to S's \code {.Random.seed[1:12]} ! Undefined control sequence. l.28212 is \bold {not} exactly the same as that in recent versions of S-PLUS. ! Undefined control sequence. \code {"Mersenne-Twister"}: l.28214 \item[\code{"Mersenne-Twister"}:] ! Undefined control sequence. l.28216 \eqn {2^{19937} - 1}{} and equidistribution in 623 ! Missing $ inserted. $ l.28216 \eqn{2^ {19937} - 1}{} and equidistribution in 623 ! Extra }, or forgotten $. l.28216 \eqn{2^{19937} - 1} {} and equidistribution in 623 ! Missing $ inserted. $ l.28220 ! Missing } inserted. } l.28220 Underfull \hbox (badness 10000) in paragraph at lines 28215--28220 []\OT1/cmr/m/n/10 From Mat-sumoto and Nishimura Underfull \hbox (badness 10000) in paragraph at lines 28215--28220 \OT1/cmr/m/n/10 (1998). A twisted GFSR with pe-riod 2$[] \OMS/cmsy/m/n/10 ^^@ Overfull \hbox (77.51126pt too wide) in paragraph at lines 28215--28220 \OT1/cmr/m/n/10 1[]\OML/cmm/m/it/10 andequidistributionin\OT1/cmr/m/n/10 623\OM L/cmm/m/it/10 consecutivedimensions\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 overthewho leperiod\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :The\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 seed[]isa\OT1/cmr/m/n/10 624 \OMS/cmsy/m/n/10 ^^@ ! Undefined control sequence. \code {"Knuth-TAOCP-2002"}: l.28222 \item[\code{"Knuth-TAOCP-2002"}:] ! Undefined control sequence. l.28225 \deqn {X_j = (X_{j-100} - X_{j-37}) \bmod 2^{30}% ! Missing $ inserted. $ l.28225 \deqn{X_ j = (X_{j-100} - X_{j-37}) \bmod 2^{30}% ! Extra }, or forgotten $. l.28226 } {} ! Undefined control sequence. l.28229 buffer). The period is around \eqn {2^{129}}{}. ! Missing $ inserted. $ l.28230 ! Missing } inserted. } l.28230 Underfull \hbox (badness 10000) in paragraph at lines 28223--28230 []\OT1/cmr/m/n/10 A 32-bit in-te-ger GFSR us-ing Underfull \hbox (badness 10000) in paragraph at lines 28223--28230 \OT1/cmr/m/n/10 lagged Fi-bonacci se-quences with sub-trac-tion. That is, Underfull \hbox (badness 10000) in paragraph at lines 28223--28230 \OT1/cmr/m/n/10 the re-cur-rence used is X$[] = (\OML/cmm/m/it/10 X[] \OMS/cmsy /m/n/10 ^^@ \OML/cmm/m/it/10 X[]\OT1/cmr/m/n/10 ) [] Overfull \hbox (302.73724pt too wide) in paragraph at lines 28223--28230 \OT1/cmr/m/n/10 2[][]\OML/cmm/m/it/10 andthe\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 s eed[]isthesetofthe\OT1/cmr/m/n/10 100\OML/cmm/m/it/10 lastnumbers\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 actuallyrecordedas\OT1/cmr/m/n/10 101\OML/cmm/m/it/10 numbe rs; thelastbeingacyclicshiftofthebuffer\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :Thepe riodisaround[][]:[]$ ! Undefined control sequence. \code {"Knuth-TAOCP"}: l.28232 \item[\code{"Knuth-TAOCP"}:] ! Undefined control sequence. l.28237 \R {} did not allow you to choose consecutive seeds, the reported ! Undefined control sequence. l.28240 ...his generator is done in interpreted \R {} code ! Undefined control sequence. \code {"L'Ecuyer-CMRG"}: l.28243 \item[\code{"L'Ecuyer-CMRG"}:] ! Undefined control sequence. l.28248 \eqn {2^{191}}{}. ! Missing $ inserted. $ l.28248 \eqn{2^ {191}}{}. ! Extra }, or forgotten $. l.28248 \eqn{2^{191}} {}. ! Missing $ inserted. $ l.28249 ! Missing } inserted. } l.28249 Underfull \hbox (badness 10000) in paragraph at lines 28244--28249 []\OT1/cmr/m/n/10 A `com-bined multiple-recursive gen-er-a-tor' from ! Undefined control sequence. l.28253 \code {4294967087} and \code{4294944443} respectively. ! Undefined control sequence. l.28253 \code{4294967087} and \code {4294944443} respectively. ! Undefined control sequence. l.28256 ...e multiple streams used in package \pkg {parallel}. ! Undefined control sequence. \code {"user-supplied"}: l.28260 \item[\code{"user-supplied"}:] ! Undefined control sequence. l.28261 Use a user-supplied generator. See \code {\LinkA{Random.user}{Random... ! Undefined control sequence. l.28261 ...r-supplied generator. See \code{\LinkA {Random.user}{Random.user}... Underfull \hbox (badness 10000) in paragraph at lines 28261--28263 []\OT1/cmr/m/n/10 Use a user-supplied gen-er-a-tor. See Ran- ! Undefined control sequence. l.28268 \code {normal.kind} can be \code{"Kinderman-Ramage"}, ! Undefined control sequence. l.28268 \code{normal.kind} can be \code {"Kinderman-Ramage"}, ! Undefined control sequence. l.28269 \code {"Buggy Kinderman-Ramage"} (not for \code{set.seed}), ! Undefined control sequence. l.28269 ...Buggy Kinderman-Ramage"} (not for \code {set.seed}), ! Undefined control sequence. l.28270 \code {"Ahrens-Dieter"}, \code{"Box-Muller"}, \code{"Inversion"} (the ! Undefined control sequence. l.28270 \code{"Ahrens-Dieter"}, \code {"Box-Muller"}, \code{"Inversion"} (the ! Undefined control sequence. l.28270 ...ns-Dieter"}, \code{"Box-Muller"}, \code {"Inversion"} (the ! Undefined control sequence. l.28271 default), or \code {"user-supplied"}. (For inversion, see the ! Undefined control sequence. l.28272 reference in \code {\LinkA{qnorm}{qnorm}}.) The Kinderman-Ramage gen... ! Undefined control sequence. l.28272 reference in \code{\LinkA {qnorm}{qnorm}}.) The Kinderman-Ramage gen... ! Undefined control sequence. l.28273 ...rsions prior to 1.7.0 (now called \code {"Buggy"}) had several ! Undefined control sequence. l.28275 results. The \code {"Box-Muller"} generator is stateful as pairs of ! Undefined control sequence. l.28278 and when \code {kind} is changed. ! Undefined control sequence. l.28280 \code {set.seed} uses a single integer argument to set as many seeds ! Undefined control sequence. l.28284 \code {"Mersenne-Twister"} and \code{"Knuth-TAOCP"}). There is no ! Undefined control sequence. l.28284 \code{"Mersenne-Twister"} and \code {"Knuth-TAOCP"}). There is no ! Undefined control sequence. l.28285 guarantee that different values of \code {seed} will seed the RNG ! Undefined control sequence. l.28287 called with \code {seed = NULL} it re-initializes (see `Note') [275 [13] ! Undefined control sequence. l.28290 The use of \code {kind = NULL} or \code{normal.kind = NULL} in ! Undefined control sequence. l.28290 The use of \code{kind = NULL} or \code {normal.kind = NULL} in ! Undefined control sequence. l.28291 \code {RNGkind} or \code{set.seed} selects the currently-used ! Undefined control sequence. l.28291 \code{RNGkind} or \code {set.seed} selects the currently-used ! Undefined control sequence. l.28294 \code {"default"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28295 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28297 \begin{Value} ! Undefined control sequence. l.28298 \code {.Random.seed} is an \code{\LinkA{integer}{integer}} vector who... ! Undefined control sequence. l.28298 \code{.Random.seed} is an \code {\LinkA{integer}{integer}} vector who... ! Undefined control sequence. l.28298 \code{.Random.seed} is an \code{\LinkA {integer}{integer}} vector who... ! Undefined control sequence. l.28300 two decimal digits are in \code {0:(k-1)} ! Undefined control sequence. l.28301 where \code {k} is the number of available RNGs. The hundreds ! Undefined control sequence. l.28302 ... of normal generator (starting at \code {0}). ! Undefined control sequence. l.28304 In the underlying C, \code {.Random.seed[-1]} is \code{unsigned}; ! Undefined control sequence. l.28304 ...ing C, \code{.Random.seed[-1]} is \code {unsigned}; ! Undefined control sequence. l.28305 therefore in \R {} \code{.Random.seed[-1]} can be negative, due to ! Undefined control sequence. l.28305 therefore in \R{} \code {.Random.seed[-1]} can be negative, due to Underfull \hbox (badness 5637) in paragraph at lines 28304--28307 []\OT1/cmr/m/n/10 In the un-der-ly-ing C, .Random.seed[-1] is un-signed; there- fore in ! Undefined control sequence. l.28308 \code {RNGkind} returns a two-element character vector of the RNG and ! Undefined control sequence. l.28310 argument is not \code {NULL}. A type starts a session as the default, ! Undefined control sequence. l.28311 and is selected either by a call to \code {RNGkind} or by setting ! Undefined control sequence. l.28312 \code {.Random.seed} in the workspace. ! Undefined control sequence. l.28314 \code {RNGversion} returns the same information as \code{RNGkind} about ! Undefined control sequence. l.28314 ...} returns the same information as \code {RNGkind} about ! Undefined control sequence. l.28315 the defaults in a specific \R {} version. ! Undefined control sequence. l.28317 \code {set.seed} returns \code{NULL}, invisibly. ! Undefined control sequence. l.28317 \code{set.seed} returns \code {NULL}, invisibly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28318 \end{Value} ! LaTe]X Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28320 \begin{Note} \relax ! Undefined control sequence. l.28327 \code {.Random.seed} saves the seed set for the uniform random-number ! Undefined control sequence. l.28331 to reproduce work later, call \code {set.seed} (preferably with ! Undefined control sequence. l.28332 explicit values for \code {kind} and \code{normal.kind}) rather than ! Undefined control sequence. l.28332 explicit values for \code{kind} and \code {normal.kind}) rather than ! Undefined control sequence. l.28333 set \code {.Random.seed}. ! Undefined control sequence. l.28335 The object \code {.Random.seed} is only looked for in the user's ! Undefined control sequence. l.28340 ...d to doubles, so they take at most \eqn {2^{32}}{} distinct ! Missing $ inserted. $ l.28340 ...o doubles, so they take at most \eqn{2^ {32}}{} distinct ! Extra }, or forgotten $. l.28340 ...bles, so they take at most \eqn{2^{32}} {} distinct ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28343 \end{Note} ! Missing $ inserted. $ l.28343 \end{Note} ! Missing } inserted. } l.28343 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28345 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28347 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28349 \begin{References} \relax ! Undefined control sequence. l.28353 \emph{Mathematics of Computation} \bold {27}, 927-937. Underfull \hbox (badness 10000) in paragraph at lines 28338--28354 []\OT1/cmr/m/n/10 Do not rely on ran-dom-ness of low-order bits from RNGs. Underfull \hbox (badness 10000) in paragraph at lines 28338--28354 \OT1/cmr/m/n/10 Most of the sup-plied uni-form gen-er-a-tors re-turn 32-bit in- te- Underfull \hbox (badness 6094) in paragraph at lines 28338--28354 \OT1/cmr/m/n/10 ger val-ues that are con-verted to dou-bles, so they take at mo st Underfull \hbox (badness 10000) in paragraph at lines 28338--28354 \OT1/cmr/m/n/10 2$[][]\OML/cmm/m/it/10 distinctvaluesandlongrunswillreturndupli catedvalues\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Wichmann \OMS/cmsy/m/n/10 ^^@ Underfull \hbox (badness 2073) in paragraph at lines 28338--28354 \OML/cmm/m/it/10 Hillistheexception; andallgiveatleast\OT1/cmr/m/n/10 30\OML/cm m/m/it/10 varyingbits:\OT1/cmr/m/n/10 )$ of RNGkind: Mar-tin ! Undefined control sequence. l.28357 Wadsworth \& Brooks/Cole. (\code {set.seed}, storing in \code{.Rando... ! Undefined control sequence. l.28357 ...le. (\code{set.seed}, storing in \code {.Random.seed}.) ! Undefined control sequence. l.28360 ...nnals of Mathematical Statistics} \bold {29}, ! Undefined control sequence. l.28365 Number Generator}, Statist. Comput., \bold {3}, 67--70. ! Undefined control sequence. l.28369 ...American Statistical Association} \bold {71}, ! Undefined control sequence. l.28374 Source code at \url {http://www-cs-faculty.stanford.edu/~knuth/taocp.... [276 [14] ! Undefined control sequence. l.28382 Research} \bold {47}, 159--164. ! Undefined control sequence. l.28385 paper, posting on Usenet newsgroup \code {sci.stat.math} on ! Undefined control sequence. l.28389 ...ors. \emph{Computers in Physics}, \bold {8}, ! Undefined control sequence. l.28396 \bold {8}, 3--30.\\{} ! Undefined control sequence. l.28397 Source code formerly at \code {http://www.math.keio.ac.jp/\textasciit... ! Undefined control sequence. l.28398 Now see \url {http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/VERSION... ! Undefined control sequence. l.28406 Generator}, Applied Statistics, \bold {31}, 188--190; Remarks: ! Undefined control sequence. l.28407 \bold {34}, 198 and \bold{35}, 89. ! Undefined control sequence. l.28407 \bold{34}, 198 and \bold {35}, 89. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28408 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28410 \begin{SeeAlso} \relax ! Undefined control sequence. l.28411 \code {\LinkA{sample}{sample}} for random sampling with and without r... ! Undefined control sequence. l.28411 \code{\LinkA {sample}{sample}} for random sampling with and without r... ! Undefined control sequence. l.28413 \LinkA {Distributions}{Distributions} for functions for random-variat... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28415 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28417 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28418 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.28422 # # the default random seed is 626 integers, so only print a few ! You can't use `macro parameter character #' in vertical mode. l.28422 ## the default random seed is 626 integers, so only print a few ! You can't use `macro parameter character #' in horizontal mode. l.28424 # # If there is no seed, a "random" new one is created: ! You can't use `macro parameter character #' in horizontal mode. l.28424 ## If there is no seed, a "random" new one is created: ! You can't use `macro parameter character #' in horizontal mode. l.28428 RNGkind("Wich") # (partial string matching on 'kind') ! You can't use `macro parameter character #' in vertical mode. l.28430 # # This shows how 'runif(.)' works for Wichmann-Hill, ! You can't use `macro parameter character #' in vertical mode. l.28430 ## This shows how 'runif(.)' works for Wichmann-Hill, ! You can't use `macro parameter character #' in horizontal mode. l.28431 # # using only R functions: ! You can't use `macro para]meter character #' in horizontal mode. l.28431 ## using only R functions: ! You can't use `macro parameter character #' in vertical mode. l.28447 # # ---- ! You can't use `macro parameter character #' in vertical mode. l.28447 ## ---- ! You can't use `macro parameter character #' in horizontal mode. l.28449 RNGkind("Super") # matches "Super-Duper" ! You can't use `macro parameter character #' in horizontal mode. l.28451 .Random.seed # new, corresponding to Super-Duper ! You can't use `macro parameter character #' in vertical mode. l.28453 # # Reset: ! You can't use `macro parameter character #' in vertical mode. l.28453 ## Reset: ! You can't use `macro parameter character #' in vertical mode. l.28456 # # ---- ! You can't use `macro parameter character #' in vertical mode. l.28456 ## ---- ! You can't use `macro parameter character #' in horizontal mode. l.28457 sum(duplicated(runif(1e6))) # around 110 for default generator ! You can't use `macro parameter character #' in horizontal mode. l.28458 # # and we would expect about almost sure duplicates beyond about ! You can't use `macro parameter character #' in horizontal mode. l.28458 ## and we would expect about almost sure duplicates beyond about ! You can't use `macro parameter character #' in horizontal mode. l.28459 qbirthday(1 - 1e-6, classes = 2e9) # 235,000 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28460 \end{ExampleCode} ! Missing } inserted. } l.28460 \end{ExampleCode} ! Missing } inserted. } l.28460 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28461 \end{Examples} ! Undefined control sequence. l.28462 \HeaderA {Random.user}{User-supplied Random Number Generation}{Random... ! Undefined control sequence. l.28463 \keyword {distribution}{Random.user} ! Undefined control sequence. l.28464 \keyword {sysdata}{Random.user} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28466 \begin{Description} \relax ! Undefined control sequence. l.28467 Function \code {\LinkA{RNGkind}{RNGkind}} allows user-coded uniform and ! Undefined control sequence. l.28467 Function \code{\LinkA {RNGkind}{RNGkind}} allows user-coded uniform and ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28470 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28472 \begin{Details} \relax ! Undefined control sequence. l.28475 \code {user\_unif\_rand}, which takes no arguments and returns a ! Undefined control sequence. l.28479 ...e user can supply the entry point \code {user\_unif\_init}, ! Undefined control sequence. l.28480 which is called with an \code {unsigned int} argument when ! Undefined control sequence. l.28481 \code {\LinkA{RNGkind}{RNGkind}} (or \code{set.seed}) is called, and ... ! Undefined control sequence. l.28481 \code{\LinkA {RNGkind}{RNGkind}} (or \code{set.seed}) is called, and ... ! Undefined control sequence. l.28481 \code{\LinkA{RNGkind}{RNGkind}} (or \code {set.seed}) is called, and ... ! Undefined control sequence. l.28483 ...sed to set the `seeds'; it is the \code {seed} argument to ! Undefined control sequence. l.28484 \code {set.seed} or an essentially random seed if \code{\LinkA{RNGkin... ! Undefined control sequence. l.28484 ... or an essentially random seed if \code {\LinkA{RNGkind}{RNGkind}} ! Undefined control sequence. l.28484 ...essentially random seed if \code{\LinkA {RNGkind}{RNGkind}} [277] ! Undefined control sequence. l.28488 generator's state is recorded in \code {.Random.seed}. Optionally, ! Undefined control sequence. l.28489 functions \code {user\_unif\_nseed} and \code{user\_unif\_seedloc} ca... ! Undefined control sequence. l.28489 ...ions \code{user\_unif\_nseed} and \code {user\_unif\_seedloc} can be ! Undefined control sequence. l.28491 ... and to an integer (specifically, \samp {Int32}) ! Undefined control sequence. l.28492 array of seeds. Calls to \code {GetRNGstate} and \code{PutRNGstate} ! Undefined control sequence. l.28492 ... Calls to \code{GetRNGstate} and \code {PutRNGstate} ! Undefined control sequence. l.28493 ... then copy this array to and from \code {.Random.seed}. ! Undefined control sequence. l.28496 \code {user\_norm\_rand}, which takes no arguments and returns a ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28498 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28500 \begin{Section} {Warning} ! Undefined control sequence. l.28502 functions can crash \R {}. Do include the \file{R\_ext/Random.h} ! Undefined control sequence. l.28502 ...s can crash \R{}. Do include the \file {R\_ext/Random.h} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28504 \end{Section} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28506 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28507 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.28508 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.28508 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.28509 # # Marsaglia's congruential PRNG ! You can't use `macro parameter character #' in horizontal mode. l.28509 ## Marsaglia's congruential PRNG ! You can't use `macro parameter character #' in horizontal mode. l.28510 # include ! Missing $ inserted. $ l.28510 #include ! Missing $ inserted. $ l.28511 Underfull \hbox (badness 2435) in paragraph at lines 28495--28511 []\OT1/cmr/m/n/10 A user-specified nor-mal RNG is spec-i-fied by a sin-gle en-t ry point ! Missing $ inserted. $ l.28516 double * user_ unif_rand() ! Misplaced alignment tab character &. l.28520 return & res; ! Missing $ inserted. $ l.28522 Overfull \hb [15ox (94.01952pt too wide) in paragraph at lines 28516--28522 []\OT1/cmr/m/n/10 double * user$[]\OML/cmm/m/it/10 nif[]and\OT1/cmr/m/n/10 ()[] $ ! Missing $ inserted. $ l.28523 void user_ unif_init(Int32 seed_in) { seed = seed_in; } ! Misplaced alignment tab character &. l.28524 int * user_unif_nseed() { return & nseed; } ! Misplaced alignment tab character &. l.28525 ... user_unif_seedloc() { return (int *) & seed; } ! Missing $ inserted. $ l.28526 Underfull \hbox (badness 10000) in paragraph at lines 28523--28526 []\OT1/cmr/m/n/10 void user$[]\OML/cmm/m/it/10 nif[]nit\OT1/cmr/m/n/10 (\OML/cm m/m/it/10 Int\OT1/cmr/m/n/10 32\OML/cmm/m/it/10 seed[]n\OT1/cmr/m/n/10 )[]\OML/ cmm/m/it/10 int \OMS/cmsy/m/n/10 ^^C ! You can't use `macro parameter character #' in horizontal mode. l.28528 # include ! Missing $ inserted. $ l.28531 double * user_ norm_rand() ! Misplaced alignment tab character &. l.28541 return & x; ! Missing $ inserted. $ l.28543 Overfull \hbox (548.38525pt too wide) in paragraph at lines 28531--28543 []\OT1/cmr/m/n/10 double * user$[]\OML/cmm/m/it/10 orm[]and\OT1/cmr/m/n/10 ()[] $ ! You can't use `macro parameter character #' in vertical mode. l.28544 # # Use under Unix: ! You can't use `macro parameter character #' in vertical mode. l.28544 ## Use under Unix: ! You can't use `macro parameter character #' in vertical mode. l.28556 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.28556 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28557 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28558 \end{Examples} ! Undefined control sequence. l.28559 \HeaderA {range}{Range of Values}{range} ! Undefined control sequence. l.28560 \methaliasA {range.default}{range}{range.default} ! Undefined control sequence. l.28561 \keyword {univar}{range} ! Undefined control sequence. l.28562 \keyword {arith}{range} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28564 \begin{Description} \relax ! Undefined control sequence. l.28565 \code {range} returns a vector containing the minimum and maximum of ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28567 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28569 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28576 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28578 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28579 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28580 \item[\code{...}] any \code{\LinkA{numeric}{numeric}} or character o... ! Undefined control sequence. l.28580 \item[\code{...}] any \code {\LinkA{numeric}{numeric}} or character o... ! Undefined control sequence. l.28580 \item[\code{...}] any \code{\LinkA {numeric}{numeric}} or character o... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28581 \item[\code{na.rm}] logical, indicating if \code{\LinkA{NA}{NA}}'s s... ! Undefined control sequence. l.28581 ...de{na.rm}] logical, indicating if \code {\LinkA{NA}{NA}}'s should be ! Undefined control sequence. l.28581 ...m}] logical, indicating if \code{\LinkA {NA}{NA}}'s should be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28583 \item[\code{finite}] logical, indicating if all non-finite elements ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28585 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28586 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28588 \begin{Details} \relax ! Undefined control sequence. l.28589 \code {range} is a generic function: methods can be defined for it ! Undefined control sequence. l.28590 directly or via the \code {\LinkA{Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.28590 directly or via the \code{\LinkA {Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.28591 ...s to work properly, the arguments \code {...} should be ! Undefined control sequence. l.28594 If \code {na.rm} is \code{FALSE}, \code{NA} ! Undefined control sequence. l.28594 If \code{na.rm} is \code {FALSE}, \code{NA} ! Undefined control sequence. l].28594 If \code{na.rm} is \code{FALSE}, \code {NA} ! Undefined control sequence. l.28595 and \code {NaN} values in any of the arguments will cause \code{NA} v... ! Undefined control sequence. l.28595 ...n any of the arguments will cause \code {NA} values ! Undefined control sequence. l.28596 to be returned, otherwise \code {NA} values are ignored. ! Undefined control sequence. l.28598 If \code {finite} is \code{TRUE}, the minimum ! Undefined control sequence. l.28598 If \code{finite} is \code {TRUE}, the minimum ! Undefined control sequence. l.28600 \code {finite = TRUE} \emph{includes} \code{na.rm = TRUE}. ! Undefined control sequence. l.28600 \code{finite = TRUE} \emph{includes} \code {na.rm = TRUE}. ! Undefined control sequence. l.28603 of \code {NA}s) nonempty argument left, see \code{\LinkA{min}{min}}. ! Undefined control sequence. l.28603 ...NA}s) nonempty argument left, see \code {\LinkA{min}{min}}. ! Undefined control sequence. l.28603 ...onempty argument left, see \code{\LinkA {min}{min}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28604 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28606 \begin{Section} {S4 methods} ! Undefined control sequence. l.28607 This is part of the S4 \code {\LinkA{Summary}{S4groupGeneric}} ! Undefined control sequence. l.28607 This is part of the S4 \code{\LinkA {Summary}{S4groupGeneric}} ! Undefined control sequence. l.28609 \code {x, ..., na.rm}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28610 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28612 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28616 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28618 \begin{SeeAlso} \relax ! Undefined control sequence. l.28619 \code {\LinkA{min}{min}}, \code{\LinkA{max}{max}}. ! Undefined control sequence. l.28619 \code{\LinkA {min}{min}}, \code{\LinkA{max}{max}}. ! Undefined control sequence. l.28619 \code{\LinkA{min}{min}}, \code {\LinkA{max}{max}}. ! Undefined control sequence. l.28619 \code{\LinkA{min}{min}}, \code{\LinkA {max}{max}}. ! Undefined control sequence. l.28621 The \code > {\LinkA{extendrange}{extendrange}()} utility in package \pk... ! Undefined control sequence. l.28621 The \code{\LinkA {extendrange}{extendrange}()} utility in package \pk... ! Undefined control sequence. l.28621 ...extendrange}()} utility in package \pkg {grDevices}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28622 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28624 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28625 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.28627 diff(r.x) # the SAMPLE range ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28633 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28634 \end{Examples} ! Undefined control sequence. l.28635 \HeaderA {rank}{Sample Ranks}{rank} ! Undefined control sequence. l.28636 \keyword {univar}{rank} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28638 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28641 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28643 \begin{Usage} [278 for immediate help. ... l.28648 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28650 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28651 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28652 \item[\code{x}] a numeric, complex, character or logical vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28653 \item[\code{na.last}] for controlling the treatment of \code{\LinkA{... ! Undefined control sequence. l.28653 ... for controlling the treatment of \code {\LinkA{NA}{NA}}s. ! Undefined control sequence. l.28653 ...ntrolling the treatment of \code{\LinkA {NA}{NA}}s. ! Undefined control sequence. l.28654 If \code {TRUE}, missing values in the data are put last; if ! Undefined control sequence. l.28655 \code {FALSE}, they are put first; if \code{NA}, they are removed; if ! Undefined control sequence. l.28655 \code{FALSE}, they are put first; if \code {NA}, they are removed; if ! Undefined control sequence. l.28656 \code {"keep"} they are kept with rank \code{NA}. ! Undefined control sequence. l.28656 ...e{"keep"} they are kept with rank \code {NA}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28657 \item[\code{ties.method}] a character string specifying how ties are... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28659 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28660 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28662 \begin{Details} \relax ! Undefined control sequence. l.28663 ... components are different (and no \code {NA}s), the ranks are ! Undefined control sequence. l.28664 well defined, with values in \code {seq\_along(x)}. With some values... ! Undefined control sequence. l.28665 (called `ties'), the argument \code {ties.method} determines the ! Undefined control sequence. l.28666 ...t the corresponding indices. The \code {"first"} method results ! Undefined control sequence. l.28668 analogously \code {"last"} with decreasing values. The ! Undefined control sequence. l.28669 \code {"random"} method puts these in random order whereas the ! Undefined control sequence. l.28670 default, \code {"average"}, replaces them by their mean, and ! Undefined control sequence. l.28671 \code {"max"} and \code{"min"} replaces them by their maximum and ! Undefined control sequence. l.28671 \code{"max"} and \code {"min"} replaces them by their maximum and ! Undefined control sequence. l.28675 \code {NA} values are never considered to be equal: for \code{na.last = ! Undefined control sequence. l.28675 ...never considered to be equal: for \code {na.last = ! Undefined control sequence. l.28676 TRUE} and \code {na.last = FALSE} they are given distinct ranks in ! Undefined control sequence. l.28677 the order in which they occur in \code {x}. ! Undefined control sequence. l.28679 \strong {NB}: \code{rank} is not itself generic but \code{\LinkA{xtfr... ! Undefined control sequence. l.28679 \strong{NB}: \code {rank} is not itself generic but \code{\LinkA{xtfr... ! Undefined control sequence. l.28679 ...e{rank} is not itself generic but \code {\LinkA{xtfrm}{xtfrm}} ! Undefined control sequence. l.28679 ... is not itself generic but \code{\LinkA {xtfrm}{xtfrm}} ! Undefined control sequence. l.28680 is, and \code {rank(xtfrm(x), ....)} will have the desired result if ! Undefined control sequence. l.28681 there is a \code {xtfrm} method. Otherwise, \code{rank} will make use ! Undefined control sequence. l.28681 ... \code{xtfrm} method. Otherwise, \code {rank} will make use ! Undefined control sequence. l.28682 of \code {==}, \code{>}, \code{is.na} and extraction methods for ! Undefined control sequence. l.28682 of \code{==}, \code {>}, \code{is.na} and extraction methods for ! Undefined control sequence. l.28682 of \code{==}, \code{>}, \code {is.na} and extraction methods for ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28684 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28686 \begin{Value} ! Undefined control sequence. l.28687 ...eric vector of the same length as \code {x} with names copied from ! Undefined control sequence. l.28688 \code {x} (unless \code{na.last = NA}, when missing values are ! Undefined control sequence. l.28688 \code{x} (unless \code {na.last = NA}, when missing values are ! Undefined control sequence. l.28689 ... vector is of integer t]ype unless \code {x} is a long ! Undefined control sequence. l.28690 vector or \code {ties.method = "average"} when it is of double type ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28692 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28694 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28698 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28700 \begin{SeeAlso} \relax ! Undefined control sequence. l.28701 \code {\LinkA{order}{order}} and \code{\LinkA{sort}{sort}}; ! Undefined control sequence. l.28701 \code{\LinkA {order}{order}} and \code{\LinkA{sort}{sort}}; ! Undefined control sequence. l.28701 \code{\LinkA{order}{order}} and \code {\LinkA{sort}{sort}}; ! Undefined control sequence. l.28701 ...{\LinkA{order}{order}} and \code{\LinkA {sort}{sort}}; ! Undefined control sequence. l.28702 \code {\LinkA{xtfrm}{xtfrm}}, see above. ! Undefined control sequence. l.28702 \code{\LinkA {xtfrm}{xtfrm}}, see above. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28703 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28705 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28706 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.28710 (r2 <- rank(x2)) # ties are averaged ! You can't use `macro parameter character #' in vertical mode. l.28712 # # rank() is "idempotent": rank(rank(x)) == rank(x) : ! You can't use `macro parameter character #' in vertical mode. l.28712 ## rank() is "idempotent": rank(rank(x)) == rank(x) : ! You can't use `macro parameter character #' in vertical mode. l.28715 # # ranks without averaging ! You can't use `macro parameter character #' in vertical mode. l.28715 ## ranks without averaging ! You can't use `macro parameter character #' in horizontal mode. l.28716 rank(x2, ties.method= "first") # first occurrence wins ! You can't use `macro parameter character #' in horizontal mode. l.28717 rank(x2, ties.method= "last") # last occurrence wins ! You can't use `macro parameter character #' in horizontal mode. l.28718 rank(x2, ties.method= "random") # ties broken at random ! You can't use `macro parameter character #' in horizontal mode. l.28719 rank(x2, ties.method= "random") # and again ! You can't use `macro parameter character #' in vertical mode. l.28721 # # keep ties ties, no average ! You can't use `macro parameter character #' in vertical mode. l.28721 ## keep ties ties, no average ! You can't use `macro parameter character #' in horizontal mode. l.28722 (rma <- rank(x2, ties.method= "max")) # as used classically ! You can't use `macro parameter character #' in horizontal mode. l.28723 (rmi <- rank(x2, ties.method= "min")) # as in Sports ! You can't use `macro parameter character #' in vertical mode. l.28726 # # Comparing all tie.methods: ! You can't use `macro parameter character #' in vertical mode. l.28726 ## Comparing all tie.methods: ! You can't use `macro parameter character #' in math mode. l.28730 # # ties.method's does not matter w/o ties: ! You can't use `macro parameter character #' in math mode. l.28730 ## ties.method's does not matter w/o ties: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28734 \end{ExampleCode} ! Missing $ inserted. $ l.28734 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28735 \end{Examples} ! Undefined control sequence. l.28736 \HeaderA {rapply}{Recursively Apply a Function to a List}{rapply} ! Undefined control sequence. l.28737 \keyword {iteration}{rapply} ! Undefined control sequence. l.28738 \keyword {list}{rapply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28740 \begin{Description} \relax ! Undefined control sequence. l.28741 \code {rapply} is a recursive version of \code{\LinkA{lapply}{lapply}}. ! Undefined control sequence. l.28741 ...rapply} is a recursive version of \code {\LinkA{lapply}{lapply}}. ! Undefined control sequence. l.28741 ... is a recursive version of \code{\LinkA {lapply}{lapply}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28742 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28744 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 28726--28745 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 tM eth; function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 M\OT1/cmr/m/n/10 )\OML/cmm/m/it/ 10 rank\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; t ies:method \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 28726--28745 \OML/cmm/m/it/10 M\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 cbind\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 x\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; rx\OT1/cmr/m/n/10 2)\OML/cmm/ m/it/10 ties:method[]sdoesnotmatterw=oties \OT1/cmr/m/n/10 : \OML/cmm/m/it/10 x < Underfull \hbox (badness 2221) in paragraph at lines 28726--28745 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 sample\OT1/cmr/m/n/10 (47)\OML/cmm/m/it/10 rx < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/it /10 tMeth; function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 MM\OT1/cmr/m/n/10 )\OML/cm m/m/it/10 rank\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; ties:method \OT1/cmr/m/n/10 = [279 [17] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28749 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28751 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28752 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28753 \item[\code{object}] A list. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28754 \item[\code{f}] A function of a single argument. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28755 \item[\code{classes}] A character vector of \code{\LinkA{class}{clas... ! Undefined control sequence. l.28755 ...e{classes}] A character vector of \code {\LinkA{class}{class}} nam... ! Undefined control sequence. l.28755 ...es}] A character vector of \code{\LinkA {class}{class}} names, or ! Undefined control sequence. l.28756 \code {"ANY"} to match any class. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28757 \item[\code{deflt}] The default result (not used if \code{how = "rep... ! Undefined control sequence. l.28757 ...] The default result (not used if \code {how = "replace"}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28758 \item[\code{how}] A character string partially matching the three po... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28760 \item[\code{...}] additional arguments passed to the call to \code{f}. ! Undefined control sequence. l.28760 ...l arguments passed to the call to \code {f}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28761 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28762 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28764 \begin{Details} \relax ! Undefined control sequence. l.28765 ...function has two basic modes. If \code {how = "replace"}, each ! Undefined control sequence. l.28767 included in \code {classes} is replaced by the result of applying ! Undefined control sequence. l.28768 \code {f} to the element. ! Undefined control sequence. l.28770 If the mode is \code {how = "list"} or \code{how = "unlist"}, the list ! Undefined control sequence. l.28770 ...he mode is \code{how = "list"} or \code {how = "unlist"}, the list ! Undefined control sequence. l.28772 \code {classes} are replaced by the result of applying \code{f} to the ! Undefined control sequence. l.28772 ...eplaced by the result of applying \code {f} to the ! Undefined control sequence. l.28773 ...nt and all others are replaced by \code {deflt}. Finally, if ! Undefined control sequence. l.28774 \code {how = "unlist"}, \code{unlist(recursive = TRUE)} is called on ! Undefined control sequence. l.28774 \code{how = "unlist"}, \code {unlist(recursive = TRUE)} is called on ! Undefined control sequence. l.28777 The semantics differ in detail from \code {\LinkA{lapply}{lapply}}: in ! Undefined control sequence. l.28777 ...tics differ in detail from \code{\LinkA {lapply}{lapply}}: in ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28779 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28781 \begin{Value} ! Undefined control sequence. l.28782 If \code {how = "unlist"}, a vector, otherwise a list of similar ! Undefined control sequence. l.28783 structure to \code {object}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28784 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28786 \begin{References} \relax ! Undefined control sequence. l.28790 (\code {rapply} is only described briefly there.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28791 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX m]anual or LaTeX Companion for explanation. Type H for immediate help. ... l.28793 \begin{SeeAlso} \relax ! Undefined control sequence. l.28794 \code {\LinkA{lapply}{lapply}}, \code{\LinkA{dendrapply}{dendrapply}}. ! Undefined control sequence. l.28794 \code{\LinkA {lapply}{lapply}}, \code{\LinkA{dendrapply}{dendrapply}}. ! Undefined control sequence. l.28794 \code{\LinkA{lapply}{lapply}}, \code {\LinkA{dendrapply}{dendrapply}}. ! Undefined control sequence. l.28794 ...e{\LinkA{lapply}{lapply}}, \code{\LinkA {dendrapply}{dendrapply}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28795 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28797 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28798 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28808 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28809 \end{Examples} ! Undefined control sequence. l.28810 \HeaderA {raw}{Raw Vectors}{raw} ! Undefined control sequence. l.28811 \aliasA {as.raw}{raw}{as.raw} ! Undefined control sequence. l.28812 \aliasA {is.raw}{raw}{is.raw} ! Undefined control sequence. l.28813 \keyword {classes}{raw} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28815 \begin{Description} \relax ! Undefined control sequence. l.28816 Creates or tests for objects of type \code {"raw"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28817 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28819 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28825 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type [18 H for immediate help. ... l.28827 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28828 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28829 \item[\code{length}] desired length. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28830 \item[\code{x}] object to be coerced. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28831 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28832 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28834 \begin{Details} \relax ! Undefined control sequence. l.28837 .... The relational operators (see \LinkA {Comparison}{Comparison}, ! Undefined control sequence. l.28839 logical operators (see \LinkA {Logic}{Logic}) with a bitwise interpre... ! Undefined control sequence. l.28844 \code {\LinkA{rawToChar}{rawToChar}}. ! Undefined control sequence. l.28844 \code{\LinkA {rawToChar}{rawToChar}}. ! Undefined control sequence. l.28848 values which are outside the range \code {[0 ... 255]} or are ! Undefined control sequence. l.28849 \code {NA} are set to \code{0} (the \code{nul} byte). ! Undefined control sequence. l.28849 \code{NA} are set to \code {0} (the \code{nul} byte). ! Undefined control sequence. l.28849 \code{NA} are set to \code{0} (the \code {nul} byte). ! Undefined control sequence. l.28851 \code {as.raw} and \code{is.raw} are \LinkA{primitive}{primitive} fun... ! Undefined control sequence. l.28851 \code{as.raw} and \code {is.raw} are \LinkA{primitive}{primitive} fun... ! Undefined control sequence. l.28851 \code{as.raw} and \code{is.raw} are \LinkA {primitive}{primitive} fun... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28852 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28854 \begin{Value} ! Undefined control sequence. l.28855 \code {raw} creates a raw vector of the specified length. ! Undefined control sequence. l.28856 ...element of the vector is equal to \code {0}. ! Undefined control sequence. l.28859 \code {as.raw} attempts to coerce its argument to be of raw ! Undefined control sequence. l.28860 ... The (elementwise) answer will be \code {0} unless the ! Undefined control sequence. l.28863 \code {is.raw} returns true if and only if \code{typeof(x) == "raw"}. [280]] ! Undefined control sequence. l.28863 ....raw} returns true if and only if \code {typeof(x) == "raw"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28864 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28866 \begin{SeeAlso} \relax ! Undefined control sequence. l.28867 \code {\LinkA{charToRaw}{charToRaw}}, \code{\LinkA{rawShift}{rawShift... ! Undefined control sequence. l.28867 \code{\LinkA {charToRaw}{charToRaw}}, \code{\LinkA{rawShift}{rawShift... ! Undefined control sequence. l.28867 \code{\LinkA{charToRaw}{charToRaw}}, \code {\LinkA{rawShift}{rawShift... ! Undefined control sequence. l.28867 ...kA{charToRaw}{charToRaw}}, \code{\LinkA {rawShift}{rawShift}}, etc. ! Undefined control sequence. l.28869 \code {\LinkA{\&}{.Ramp.}} for bitwise operations on raw vectors. ! Undefined control sequence. l.28869 \code{\LinkA {\&}{.Ramp.}} for bitwise operations on raw vectors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28870 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28872 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28873 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.28875 xx[1] <- as.raw(40) # NB, not just 40. ! You can't use `macro parameter character #' in horizontal mode. l.28877 xx # # 28 41 -- raw prints hexadecimals ! You can't use `macro parameter character #' in horizontal mode. l.28877 xx ## 28 41 -- raw prints hexadecimals ! You can't use `macro parameter character #' in horizontal mode. l.28878 dput(xx) # # as.raw(c(0x28, 0x41)) ! You can't use `macro parameter character #' in horizontal mode. l.28878 dput(xx) ## as.raw(c(0x28, 0x41)) ! You can't use `macro parameter character #' in horizontal mode. l.28879 as.integer(xx) # # 40 65 ! You can't use `macro parameter character #' in horizontal mode. l.28879 as.integer(xx) ## 40 65 ! You can't use `macro parameter character #' in horizontal mode. l.28883 is.vector(y) # TRUE ! Undefined control sequence. l.28887 stopifnot( charToRaw("\xa 3") == as.raw(0xa3) ) ! You can't use `macro parameter character #' in horizontal mode. l.28890 isASCII(x) # true ! Undefined control sequence. l.28891 isASCII("\xa 325.63") # false (in Latin-1, this is an amount in UK po... ! You can't use `macro parameter character #' in horizontal mode. l.28891 isASCII("\xa325.63") # false (in Latin-1, this is an amount in UK po... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28892 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28893 \end{Examples} ! Undefined control sequence. l.28894 \HeaderA {rawConnection}{Raw Connections}{rawConnection} ! Undefined control sequence. l.28895 \aliasA {rawConnectionValue}{rawConnection}{rawConnectionValue} ! Undefined control sequence. l.28896 \keyword {file}{rawConnection} ! Undefined control sequence. l.28897 \keyword {connection}{rawConnection} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28899 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28901 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28903 \begin{Usage} Underfull \hbox (badness 1540) in paragraph at lines 28889--28904 \OT1/cmr/m/n/10 raw-Con-nec-tion-Raw Con-nec-tion-sraw-Con-nec-tion raw-Con-nec -tion-Va-l-uer-aw-Con- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28909 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28911 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28912 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28913 \item[\code{object}] character or raw vector. A description of the ... ! Undefined control sequence. l.28914 For an input this is an \R {} raw vector object, and for an output ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28917 \item[\code{open}] character. Any of the standard connection open m... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28918 \item[\code{con}] An output raw connection. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28919 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28920 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28922 \begin{Details} \relax ! Undefined control sequence. l.28924 ...connection object is created, and \code {close} ! Undefined control sequence. l.28927 ... connection is opened and creates an \R {} raw vector ! Undefined control sequence. l.28929 \code {rawConnectionValue}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28933 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28935 \begin{Value} ! Undefined control sequence. l.28936 For \code {rawConnection}, a connection object of class ! Undefined control sequence. l.28937 \code {"rawConnection"} which inherits from class \code{"connection"}. ! Undefined control sequence. l.28937 ...ction"} which inherits from class \code {"connection"}. ! Undefined control sequence. l.28939 For \code {rawConnectionValue}, a raw vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28940 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28942 \begin{Note} \relax ! Undefined control sequence. l.28946 \code {\LinkA{file}{file}()} connection to collect output. ! Undefined control sequence. l.28946 \code{\LinkA {file}{file}()} connection to collect output. ! Undefined control sequence. l.28948 On (rare) platforms where \code {vsnprintf} does not return the neede... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28951 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28953 \begin{SeeAlso} \relax ! Undefined control sequence. l.28954 \code {\LinkA{connections}{connections}}, \code{\LinkA{s [19howConnection... ! Undefined control sequence. l.28954 \code{\LinkA {connections}{connections}}, \code{\LinkA{showConnection... ! Undefined control sequence. l.28954 ...LinkA{connections}{connections}}, \code {\LinkA{showConnections}{s... ! Undefined control sequence. l.28954 ...onnections}{connections}}, \code{\LinkA {showConnections}{showConn... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28955 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28957 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28958 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.28959 zz <- rawConnection(raw(0), "r+") # start with empty raw vector ! You can't use `macro parameter character #' in horizontal mode. l.28962 readLines(zz) # raw vector has embedded nuls ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28967 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28968 \end{Examples} ! Undefined control sequence. l.28969 \HeaderA {rawConversion}{Convert to or from Raw Vectors}{rawConversion} ! Undefined control sequence. l.28970 \aliasA {charToRaw}{rawConversion}{charToRaw} ! Undefined control sequence. l.28971 \aliasA {intToBits}{rawConversion}{intToBits} ! Undefined control sequence. l.28972 \aliasA {packBits}{rawConversion}{packBits} ! Undefined control sequence. l.28973 \aliasA {rawShift}{rawConversion}{rawShift} ! Undefined control sequence. l.28974 \aliasA {rawToBits}{rawConversion}{rawToBits} ! Undefined control sequence. l.28975 \aliasA {rawToChar}{rawConversion}{rawToChar} ! Undefined control sequence. l.28976 \keyword {classes}{rawConversion} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28978 \begin{Description} \relax ! Undefined control sequence. l.28979 ... manipulation of objects of type \code {"raw"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28980 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28982 \begin{Usage} [281]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28993 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28995 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28996 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28997 \item[\code{x}] object to be converted or shifted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28998 \item[\code{multiple}] logical: should the conversion be to a single ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29000 \item[\code{n}] the number of bits to shift. Positive numbers shift... ! Undefined control sequence. l.29001 ...rs shift left: allowed values are \code {-8 ... 8}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29002 \item[\code{type}] the result type, partially matched. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29003 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29004 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29006 \begin{Details} \relax ! Undefined control sequence. l.29007 \code {packBits} accepts raw, integer or logical inputs, the last two ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29012 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29014 \begin{Value} [20 ! Undefined control sequence. l.29015 \code {charToRaw} converts a length-one character string to raw bytes. ! Undefined control sequence. l.29017 \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.29017 \code{\LinkA {Encoding}{Encoding}}). ! Undefined control sequence. l.29019 \code {rawToChar} converts raw bytes either to a single character ! Undefined control sequence. l.29020 ...cter vector of single bytes (with \code {""} for ! Undefined control sequence. l.29021 \code {0}). (Note that a single character string could contain ! Undefined control sequence. l.29024 ...te locale, e.g.~one using UTF-8. \LinkA {Long vectors}{Long vector... ! Undefined control sequence. l.29025 allowed if \code {multiple} is true. ! Undefined control sequence. l.29027 \code {rawShift(x, n)} shift the bits in \code{x} by \code{n} positions ! Undefined control sequence. l.29027 ...rawShift(x, n)} shift the bits in \code {x} by \code{n} positions ! Undefined control sequence. l.29027 ...n)} shift the bits in \code{x} by \code {n} positions ! Undefined control sequence. l.29028 to the right, see the argument \code {n}, above. ! Undefined control sequence. l.29030 \code {rawToBits} returns a raw vector of 8 times the length of a raw ! Undefined control sequence. l.29031 vector with entries 0 or 1. \code {intToBits} returns a raw vector ! Undefined control sequence. l.29036 \code {packBits} packs its input (using only the lowest bit for raw or ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29038 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29040 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29041 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29044 is.vector(y) # TRUE ! Misplaced alignment tab character &. l.29048 (xx <- c(y, charToRaw("& "), charToRaw("more"))) ! You can't use `macro parameter character #' in horizontal mode. l.29060 showBits(rawShift(z, 1)) # shift to right ! You can't use `macro parameter character #' in horizontal mode. l.29063 showBits(rawShift(z, -1)) # shift to left ! You can't use `macro parameter character #' in horizontal mode. l.29064 showBits(rawShift(z, -2)) # .. ! You can't use `macro parameter character #' in horizontal mode. l.29065 showBits(rawShift(z, -3)) # shifted off entirely ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29066 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29067 \end{Examples} ! Undefined control sequence. l.29068 \HeaderA {RdUtils}{Utilities for Processing Rd Files}{RdUtils} ! Undefined control sequence. l.29069 \aliasA {Rd2pdf}{RdUtils}{Rd2pdf} ! Undefined control sequence. l.29070 \aliasA {RD2PDF\_INPUTENC}{RdUtils}{RD2PDF.Rul.INPUTENC} ! Undefined control sequence. l.29071 \aliasA {Rdconv}{RdUtils}{Rdconv} ! Undefined control sequence. l.29072 \keyword {utilities}{RdUtils} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29074 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29078 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29080 \begin{Usage} Underfull \hbox (badness 1616) in paragraph at lines 29058--29081 \OT1/cmr/m/n/10 show-Bits(rawShift(z, 2)) show-Bits(z) show-Bits(rawShift(z, -1 )) shift to Underfull \hbox (badness 10000) in paragraph at lines 29058--29081 \OT1/cmr/m/n/10 RD2PDF[]INPUTENCRdUtilsRD2PDF.Rul.INPUTENC Rd-con-vR-dU-til-sRd - ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29085 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29087 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29088 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29089 \item[\code{file}] the path to a file to be processed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29090 \item[\code{files}] a list of file names specifying the R documentation [282]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29093 \item[\code{options}] further options to control the processing, or for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29095 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29096 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29098 \begin{Details} \relax ! Undefined control sequence. l.29099 \command {R CMD Rdconv} converts Rd format to plain text, HTML or LaTeX ! Undefined control sequence. l.29102 \command {R CMD Rd2pdf} is the user-level program for producing PDF o... ! Undefined control sequence. l.29104 \env {R\_PAPERSIZE} (set by \command{R CMD}, with a default set when ... ! Undefined control sequence. l.29104 \env{R\_PAPERSIZE} (set by \command {R CMD}, with a default set when ... ! Undefined control sequence. l.29104 ...mand{R CMD}, with a default set when \R {} ! Undefined control sequence. l.29105 was installed: values for \env {R\_PAPERSIZE} are \code{a4}, ! Undefined control sequence. l.29105 ...values for \env{R\_PAPERSIZE} are \code {a4}, ! Undefined control sequence. l.29106 \code {letter}, \code{legal} and \code{executive}) ! Undefined control sequence. l.29106 \code{letter}, \code {legal} and \code{executive}) ! Undefined control sequence. l.29106 \code{letter}, \code{legal} and \code {executive}) ! Undefined control sequence. l.29107 and \env {R\_PDFVIEWER} (the PDF previewer). Also, ! Undefined control sequence. l.29108 \env {RD2PDF\_INPUTENC} can be set to \code{inputenx} to make use of the ! Undefined control sequence. l.29108 \env{RD2PDF\_INPUTENC} can be set to \code {inputenx} to make use of the ! Undefined control sequence. l.29109 ... package of that name rather than \code {inputenc}: this might be ! Undefined control sequence. l.29112 \command {R CMD Rd2pdf} calls \code{tools::\LinkA{texi2pdf}{texi2pdf}... ! Undefined control sequence. l.29112 \command{R CMD Rd2pdf} calls \code {tools::\LinkA{texi2pdf}{texi2pdf}... ! Undefined control sequence. l.29112 ...R CMD Rd2pdf} calls \code{tools::\LinkA {texi2pdf}{texi2pdf}} to p... ! Undefined control sequence. l.29114 \command {texi2dvi} command which that function uses (and which can be ! Undefined control sequence. l.29115 ...en by setting environment variable \env {R\_TEXI2DVICMD}). ! Undefined control sequence. l.29117 Use \command {R CMD \var{foo} --help} to obtain usage information on ... ! Undefined control sequence. l.29117 Use \command{R CMD \var {foo} --help} to obtain usage information on ... ! Undefined control sequence. l.29118 \code {\var{foo}}. ! Undefined control sequence. l.29118 \code{\var {foo}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29119 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29121 \begin{SeeAlso} \relax ! Undefined control sequence. l.29122 ...cessing Rd format'' in the ``Writing \R {} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29124 \end{SeeAlso} ! Undefined control sequence. l.29125 \HeaderA {readBin}{Transfer Binary Data To and From Connections}{read... ! Undefined control sequence. l.29126 \aliasA {writeBin}{readBin}{writeBin} ! Undefined control sequence. l.29127 \keyword {file}{readBin} ! Undefined control sequence. l.29128 \keyword {connection}{readBin} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29130 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29132 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29134 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29142 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29144 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29145 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29146 \item[\code{con}] A \LinkA{connection}{connection} object or a chara... ! Undefined control sequence. l.29146 \item[\code{con}] A \LinkA {connection}{connection} object or a chara... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Underfull \hbox (badness 10000) in paragraph at lines 1852--1857 []@textrm [@texttt libRlapack[] @textrm in-cludes all the double-precision LA- PACK rou-tines which Underfull \hbox (badness 2875) in paragraph at lines 1852--1857 @textrm were cur-rent in 2003: a list of which rou-tines are in-cluded is in f ile [21 l.29148 \item[\code{what}] Either an object whose mode will give the mode of... ! Undefined control sequence. l.29150 the mode: one of \code {"numeric"}, \code{"double"}, ! Undefined control sequence. l.29150 the mode: one of \code{"numeric"}, \code {"double"}, ! Undefined control sequence. l.29151 \code {"integer"}, \code{"int"}, \code{"logical"}, \code{"complex"}, ! Undefined control sequence. l.29151 \code{"integer"}, \code {"int"}, \code{"logical"}, \code{"complex"}, ! Undefined control sequence. l.29151 \code{"integer"}, \code{"int"}, \code {"logical"}, \code{"complex"}, ! Undefined control sequence. l.29151 ..., \code{"int"}, \code{"logical"}, \code {"complex"}, ! Undefined control sequence. l.29152 \code {"character"}, \code{"raw"}. ! Undefined control sequence. l.29152 \code{"character"}, \code {"raw"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29153 \item[\code{n}] integer. The (maximal) number of records to be ! Undefined control sequence. l.29155 storage is reserved for \code {n} items. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29156 \item[\code{size}] integer. The number of bytes per element in the ... ! Undefined control sequence. l.29157 stream. The default, \code {NA\_integer\_}, uses the natural size. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29159 \item[\code{signed}] logical. Only used for integers of sizes 1 and 2, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29162 \item[\code{endian}] The endian-ness (\code{"big"} or \code{"little"... ! Undefined control sequence. l.29162 ...m[\code{endian}] The endian-ness (\code {"big"} or \code{"little"}... ! Undefined control sequence. l.29162 ... The endian-ness (\code{"big"} or \code {"little"}) of the ! Undefined control sequence. l.29163 target system for the file. Using \code {"swap"} will force swapping ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29165 \item[\code{object}] An \R{} object to be written to the connection. ! Undefined control sequence. l.29165 \item[\code{object}] An \R {} object to be written to the connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29166 \item[\code{useBytes}] See \code{\LinkA{writeLines}{writeLines}}. ! Undefined control sequence. l.29166 \item[\code{useBytes}] See \code {\LinkA{writeLines}{writeLines}}. ! Undefined control sequence. l.29166 \item[\code{useBytes}] See \code{\LinkA {writeLines}{writeLines}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29167 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29168 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29170 \begin{Details} \relax ! Undefined control sequence. l.29172 If \code {con} is a character string, the functions call ! Undefined control sequence. l.29173 \code {\LinkA{file}{file}} to obtain a binary-mode file connection wh... ! Undefined control sequence. l.29173 \code{\LinkA {file}{file}} to obtain a binary-mode file connection wh... [283]] [22 ! Undefined control sequence. l.29181 If \code {readBin} is called with \code{con} a raw vector, the data in ! Undefined control sequence. l.29181 If \code{readBin} is called with \code {con} a raw vector, the data in ! Undefined control sequence. l.29182 the vector is used as input. If \code {writeBin} is called with ! Undefined control sequence. l.29183 \code {con} a raw vector, it is just an indication that a raw vector ! Undefined control sequence. l.29186 If \code {size} is specified and not the natural size of the object, ! Undefined control sequence. l.29191 except if \code {signed = FALSE} when reading integers of sizes 1 and... ! Undefined control sequence. l.29192 ...ing sizes is unlikely to preserve \code {NA}s, and the extended ! Undefined control sequence. l.29195 \code {readBin} and \code{writeBin} read and write C-style ! Undefined control sequence. l.29195 \code{readBin} and \code {writeBin} read and write C-style ! Undefined control sequence. l.29197 characters. \code {\LinkA{readChar}{readChar}} and \code{\LinkA{writ... ! Undefined control sequence. l.29197 characters. \code{\LinkA {readChar}{readChar}} and \code{\LinkA{writ... ! Undefined control sequence. l.29197 ...e{\LinkA{readChar}{readChar}} and \code {\LinkA{writeChar}{writeCh... ! Undefined control sequence. l.29197 ...A{readChar}{readChar}} and \code{\LinkA {writeChar}{writeChar}} can ! Undefined control sequence. l.29201 Handling \R {}'s missing and special (\code{Inf}, \code{-Inf} and ! Undefined control sequence. l.29201 Handling \R{}'s missing and special (\code {Inf}, \code{-Inf} and ! Undefined control sequence. l.29201 ... missing and special (\code{Inf}, \code {-Inf} and ! Undefined control sequence. l.29202 \code {NaN}) values is discussed in the `R Data Import/Export' manual. ! Undefined control sequence. l.29204 Only \eqn {2^{31}-1}{} bytes can be written in a single ! Missing $ inserted. $ l.29204 Only \eqn{2^ {31}-1}{} bytes can be written in a single ! Extra }, or forgotten $. l.29204 Only \eqn{2^{31}-1} {} bytes can be written in a single ! Missing $ inserted. $ l.29207 Overfull \hbox (91.85936pt too wide) in paragraph at lines 29204--29207 []\OT1/cmr/m/n/10 Only 2$[] \OMS/cmsy/m/n/10 ^^@ \OT1/cmr/m/n/10 1[]\OML/cmm/m/ it/10 bytescanbewritteninasinglecall\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 andthatis themaximumcapacityofarawvectoron\OT1/cmr/m/n/10 32 \OMS/cmsy/m/n/10 ^^@ ! Undefined control sequence. l.29208 `Endian-ness' is relevant for \code {size > 1}, and should ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29211 \end{Details} ! Missing } inserted. } l.29211 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29213 \begin{Value} ! Undefined control sequence. l.29214 For \code {readBin}, a vector of appropriate mode and length the numb... ! Undefined control sequence. l.29215 items read (which might be less than \code {n}). ! Undefined control sequence. l.29217 For \code {writeBin}, a raw vector (if \code{con} is a raw vector) or ! Undefined control sequence. l.29217 ...\code{writeBin}, a raw vector (if \code {con} is a raw vector) or ! Undefined control sequence. l.29218 invisibly \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29219 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29221 \begin{Note} \relax ! Undefined control sequence. l.29223 \code {long} is of size 8 bytes or C type \code{long long} exists and ! Undefined control sequence. l.29223 ...ong} is of size 8 bytes or C type \code {long long} exists and ! Undefined control sequence. l.29226 Real read/writes of size \code {sizeof(long double)} (usually 12 or 16 ! Undefined control sequence. l.29228 from \code {double}. ! Undefined control sequence. l.29230 If \code {readBin(what = character())} is used incorrectly on a file ! Undefined control sequence. l.29237 the connection was opened with an \code {encoding} argument. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29238 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29240 \begin{SeeAlso} \relax ! Undefined control sequence. l.29243 \code {readChar} to read/write fixed-length strings. ! Undefined control sequence. l.29245 \code {\LinkA{connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.29245 \code{\LinkA {connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.29245 ...LinkA{connections}{connections}}, \code {\LinkA{readLines}{readLin... ! Undefined control sequence. l.29245 ...onnections}{connections}}, \code{\LinkA {readLines}{readLines}}, ! Undefined control sequence. l.29246 \code {\LinkA{writeLines}{writeLines}}. ! Undefined control sequence. l.29246 \code{\LinkA {writeLines}{writeLines}}. ! Undefined control sequence. l.29248 \code {\LinkA{.Machine}{.Machine}} for the sizes of \code{long}, \cod... ! Undefined control sequence. l.29248 \code{\LinkA {.Machine}{.Machine}} for the sizes of \code{long}, \cod... ! Undefined control sequence. l.29248 ...hine}{.Machine}} for the sizes of \code {long}, \code{long long} ! Undefined control sequence. l.29248 ...e}} for the sizes of \code{long}, \code {long long} ! Undefined control sequence. l.29249 and \code {long double}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.29250 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29252 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29253 \begin{ExampleCode} ! Missing $ inserted. $ l.29258 writeBin(pi^ 2, zz, size = 4, endian = "swap") ! Missing $ inserted. $ l.29266 writeBin((pi/3)^ (1:10), zz, size = s) ! Missing $ inserted. $ l.29268 Underfull \hbox (badness 1325) in paragraph at lines 29248--29268 \OT1/cmr/m/n/10 100\OML/cmm/m/it/10 ; collapse \OT1/cmr/m/n/10 = " + ")\OML/cmm /m/it/10 writeBin\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 z; zz\OT1/cmr/m/n/10 )\OML/c mm/m/it/10 if\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 :Machine$\OT1/cmr/m/n/10 sizeof. long == 8 || ! Missing $ inserted. $ l.29285 Underfull \hbox (badness 10000) in paragraph at lines 29269--29285 []\OT1/cmr/m/n/10 zz <- file("testbin", "rb") read-Bin(zz, in-te-ger(), 4) read -Bin(zz, Underfull \hbox (badness 10000) in paragraph at lines 29269--29285 \OT1/cmr/m/n/10 in-te-ger(), 6) read-Bin(zz, nu-meric(), 1, en-dian = "swap") r ead- Underfull \hbox (badness 3861) in paragraph at lines 29269--29285 \OT1/cmr/m/n/10 Bin(zz, nu-meric(), size = 4) read-Bin(zz, nu-meric(), size = 4 , en- Underfull \hbox (badness 7186) in paragraph at lines 29269--29285 \OT1/cmr/m/n/10 dian = "swap") read-Bin(zz, com-plex(), 1) read-Bin(zz, char-ac -ter(), Underfull \hbox (badness 10000) in paragraph at lines 29269--29285 \OT1/cmr/m/n/10 1) z2 <- read-Bin(zz, char-ac-ter(), 1) if(.Machine$\OML/cmm/m/ it/10 sizeof:long \OT1/cmr/m/n/10 == Underfull \hbox (badness 2368) in paragraph at lines 29269--29285 \OT1/cmr/m/n/10 8\OMS/cmsy/m/n/10 jj\OML/cmm/m/it/10 :Machine$\OT1/cmr/m/n/10 s izeof.longlong == 8) read-Bin(zz, in-te-ger(), 10, size = 8) [284 Underfull \hbox (badness 10000) in paragraph at lines 2044--2046 [][][][][]@smalltt http://www.openmp.org/[][][]@smallrm , [][]@smalltt https:// en.wikipedia.org/wiki/OpenMP[][][]@smallrm , [][]@smalltt https://computing.lln l.gov/ [23] ! You can't use `macro parameter character #' in vertical mode. l.29286 # # signed vs unsigned ints ! You can't use `macro parameter character #' in vertical mode. l.29286 ## signed vs unsigned ints ! You can't use `macro parameter character #' in vertical mode. l.29303 # # use of raw ! You can't use `macro parameter character #' in vertical mode. l.29303 ## use of raw ! Missing $ inserted. $ l.29304 z <- writeBin(pi^ {1:5}, raw(), size = 4) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29308 \end{ExampleCode} ! Missing $ inserted. $ l.29308 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29309 \end{Examples} ! Undefined control sequence. l.29310 \HeaderA {readChar}{Transfer Character Strings To and From Connection... ! Undefined control sequence. l.29311 \aliasA {writeChar}{readChar}{writeChar} ! Undefined control sequence. l.29312 \keyword {file}{readChar} ! Undefined control sequence. l.29313 \keyword {connection}{readChar} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29315 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29318 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29320 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 29303--29321 []\OT1/cmr/m/n/10 use of raw z <- writeBin(pi$[]\OML/cmm/m/it/10 ; raw\OT1/cmr/ m/n/10 ()\OML/cmm/m/it/10 ; size \OT1/cmr/m/n/10 = Overfull \hbox (175.23053pt too wide) in paragraph at lines 29303--29321 \OT1/cmr/m/n/10 4)\OML/cmm/m/it/10 readBin\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 z; numeric\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 5\OML/cmm/m/it/10 ; size \OT1/cmr/m/n/10 = 4)\OML/cmm/m/it/10 z < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/i t/10 writeBin\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 ("\OML/cmm/m/it /10 a\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 test \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 of\OT1/cm r/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 character\OT1/cm r/m/n/10 ")\OML/cmm/m/it/10 ; raw\OT1/cmr/m/n/10 ())\OML/cmm/m/it/10 readBin\OT 1/cmr/m/n/10 (\OML/cmm/m/it/10 z; character\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 4)$ Underfull \hbox (badness 2608) in paragraph at lines 29303--29321 \OT1/cmr/m/n/10 read-Char-Trans-fer Char-ac-ter Strings To and From Con-nec-tio n-sread-Char Underfull \hbox (badness 10000) in paragraph at lines 29303--29321 \OT1/cmr/m/n/10 writeChar-read-Char-writeChar fil-eread-Char con-nec-tion-read- Char Trans-fer Underfull \hbox (badness 1796) in paragraph at lines 29303--29321 \OT1/cmr/m/n/10 char-ac-ter strings to and from con-nec-tions, with-out as-sum- ing they are ! LaTeX Error: \begin{document} en]ded by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29327 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29329 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29330 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29331 \item[\code{con}] A \LinkA{connection}{connection} object, or a char... ! Undefined control sequence. l.29331 \item[\code{con}] A \LinkA {connection}{connection} object, or a char... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29334 \item[\code{nchars}] integer vector, giving the lengths in character... ! Undefined control sequence. l.29336 must be >= 0 and not \code {NA}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29338 \item[\code{useBytes}] logical: For \code{readChar}, should \code{nc... ! Undefined control sequence. l.29338 \item[\code{useBytes}] logical: For \code {readChar}, should \code{nc... ! Undefined control sequence. l.29338 ...ical: For \code{readChar}, should \code {nchars} be ! Undefined control sequence. l.29340 locale? For \code {writeChar}, see \code{\LinkA{writeLines}{writeLin... ! Undefined control sequence. l.29340 locale? For \code{writeChar}, see \code {\LinkA{writeLines}{writeLin... ! Undefined control sequence. l.29340 ... For \code{writeChar}, see \code{\LinkA {writeLines}{writeLines}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29342 \item[\code{object}] A character vector to be written to the connect... ! Undefined control sequence. l.29343 least as long as \code {nchars}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29345 \item[\code{eos}] `end of string': character string . The terminator ! Undefined control sequence. l.29346 ...each string, followed by an ASCII \code {nul}; ! Undefined control sequence. l.29347 use \code {NULL} for no terminator at all. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29348 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29349 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29351 \begin{Details} \relax ! Undefined control sequence. l.29352 These functions complement \code {\LinkA{readBin}{readBin}} and ! Undefined control sequence. l.29352 These functions complement \code{\LinkA {readBin}{readBin}} and ! Undefined control sequence. l.29353 \code {\LinkA{writeBin}{writeBin}} which read and write C-style zero-... ! Undefined control sequence. l.29353 \code{\LinkA {writeBin}{writeBin}} which read and write C-style zero-... ! Undefined control sequence. l.29359 If \code {con} is a character string, the functions call ! Undefined control sequence. l.29360 \code {\LinkA{file}{file}} to obtain a binary-mode file connection wh... ! Undefined control sequence. l.29360 \code{\LinkA {file}{file}} to obtain a binary-mode file connection wh... ! Undefined control sequence. l.29368 If \code {readChar} is called with \code{con} a raw vector, the data in ! Undefined control sequence. l.29368 If \code{readChar} is called with \code {con} a raw vector, the data in ! Undefined control sequence. l.29369 the vector is used as input. If \code {writeChar} is called with ! Undefined control sequence. l.29370 \code {con} a raw vector, it is just an indication that a raw vector ! Undefined control sequence. l.29373 Character strings containing ASCII \code {nul}(s) will be read ! Undefined control sequence. l.29374 correctly by \code {readChar} but truncated at the first ! Undefined control sequence. l.29375 \code {nul} with a warning. ! Undefined control sequence. l.29377 ...he character length requested for \code {readChar} is longer than ! Undefined control sequence. l.29379 returned. For \code {writeChar} if too many characters are requested [285 [24] ! Undefined control sequence. l.29382 Missing strings are written as \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29383 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29385 \begin{Value} ! Undefined control sequence. l.29386 For \code {readChar}, a character vector of length the number of ! Undefined control sequence. l.29387 items read (which might be less than \code {length(nchars)}). ! Undefined control sequence. l.29389 For \code {writeChar}, a raw vector (if \code{con} is a raw vector) or ! Undefined control sequence. l.29389 ...code{writeChar}, a raw vector (if \code {con} is a raw vector) or ! Undefined control sequence. l.29390 invisibly \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29391 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29393 \begin{Note} \relax ! Undefined control sequence. l.29394 Earlier versions of \R {} allowed embedded nul bytes within character ! Undefined control sequence. l.29395 strings, but not \R {} >= 2.8.0. \code{readChar} was commonly used to ! Undefined control sequence. l.29395 strings, but not \R{} >= 2.8.0. \code {readChar} was commonly used to ! Undefined control sequence. l.29396 ...zero-padded byte fields for which \code {readBin} was ! Undefined control sequence. l.29397 unsuitable. \code {readChar} can still be used for such fields if ! Undefined control sequence. l.29398 ...e are no embedded nuls: otherwise \code {readBin(what = "raw")} ! Undefined control sequence. l.29401 \code {nchars} will be interpreted in bytes not characters in a ! Undefined control sequence. l.29408 the connection was opened with an \code {encoding} argument. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29409 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29411 \begin{SeeAlso} \relax ! Undefined control sequence. l.29414 \code {\LinkA{connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.29414 \code{\LinkA {connections}{connections}}, \code{\LinkA{readLines}{rea... ! Undefined control sequence. l.29414 ...LinkA{connections}{connections}}, \code {\LinkA{readLines}{readLin... ! Undefined control sequence. l.29414 ...onnections}{connections}}, \code{\LinkA {readLines}{readLines}}, ! Undefined control sequence. l.29415 \code {\LinkA{writeLines}{writeLines}}, \code{\LinkA{readBin}{readBin}} ! Undefined control sequence. l.29415 \code{\LinkA {writeLines}{writeLines}}, \code{\LinkA{readBin}{readBin}} ! Undefined control sequence. l.29415 ...{\LinkA{writeLines}{writeLines}}, \code {\LinkA{readBin}{readBin}} ! Undefined control sequence. l.29415 ...{writeLines}{writeLines}}, \code{\LinkA {readBin}{readBin}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29416 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29418 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29419 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29420 # # test fixed-length strings ! You can't use `macro parameter character #' in horizontal mode. l.29420 ## test fixed-length strings ! Undefined control sequence. \n l.29425 writeChar(x, zz, eos = "\r\n ") ! Undefined control sequence. \n l.29425 writeChar(x, zz, eos = "\r\n ") ! You can't use `macro parameter character #' in horizontal mode. l.29430 readChar(zz, nchar(x)+3) # need to read the terminator explicitly ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29433 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29434 \end{Examples} ! Undefined control sequence. l.29435 \HeaderA {readline}{Read a Line from the Terminal}{readline} ! Undefined control sequence. l.29436 \keyword {utilities}{readline} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29438 \begin{Description} \relax ! Undefined control sequence. l.29439 \code {readline} reads a line from the terminal (in interactive use). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29440 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29442 \begin{Usage} ] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29446 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29448 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29449 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29450 \item[\code{prompt}] the string printed when prompting the user for ... ! Undefined control sequence. l.29451 Should usually end with a space \code {" "}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29452 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29453 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29455 \begin{Details} \relax ! Undefined control sequence. l.29459 This can only be used in an \LinkA {interactive}{interactive} session. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29460 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29462 \begin{Value} ! Undefined control sequence. l.29466 In non-\LinkA {interactive}{interactive} use the result is as if the ... ! Undefined control sequence. l.29467 RETURN and the value is \code {""}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29468 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29470 \begin{SeeAlso} \relax ! Undefined control sequence. l.29471 \code {\LinkA{readLines}{readLines}} for reading text lines from conn... ! Undefined control sequence. l.29471 \code{\LinkA {readLines}{readLines}} for reading text lines from conn... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29473 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29475 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29476 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29479 # # a better version would check the answer less cursorily, and ! You can't use `macro parameter character #' in horizontal mode. l.29479 ## a better version would check the answer less cursorily, and ! You can't use `macro parameter character #' in horizontal mode. l.29480 # # perhaps re-prompt ! You can't use `macro parameter character #' in horizontal mode. l.29480 ## perhaps re-prompt ! Undefined control sequence. l.29482 cat("This is impossible. YOU LIED!\n ") ! Undefined control sequence. l.29484 cat("I knew it.\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29487 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29488 \end{Examples} ! Undefined control sequence. l.29489 \HeaderA {readLines}{Read Text Lines from a Connection}{readLines} ! Undefined control sequence. l.29490 \keyword {file}{readLines} ! Undefined control sequence. l.29491 \keyword {connection}{readLines} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29493 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29495 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29497 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29502 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29504 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29505 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29506 \item[\code{con}] a \LinkA{connection}{connection} object or a chara... ! Undefined control sequence. l.29506 \item[\code{con}] a \LinkA {connection}{connection} object or a chara... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29507 \item[\code{n}] integer. The (maximal) number of lines to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29510 \item[\code{ok}] logical. Is it OK to reach the end of the connecti... ! Undefined control sequence. l.29511 \code {n > 0} lines are read? If not, an error will be generated. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29512 \item[\code{warn}] logical. Warn if a text file is missing a final ... [286 Overfull \hbox (46.15797pt too wide) in paragraph at lines 2231--2231 []@smalltt SOURCES = $(wildcard data/*.cpp network/*.cpp utils/*.cpp model/*.c pp model/*/*.cpp model/*/*/*.cpp)[] Overfull \hbox (31.98314pt too wide) in paragraph at lines 2233--2233 []@smalltt OBJECTS = siena07utilities.o siena07internals.o siena07setup.o sien a07models.o $(SOURCES:.cpp=.o)[] [25]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29514 \item[\code{encoding}] encoding to be assumed for input strings. It is ! Undefined control sequence. l.29517 ...ncoding as part of the connection \code {con} or ! Undefined control sequence. l.29518 via \code {\LinkA{options}{options}(encoding=)}: see the examples. ! Undefined control sequence. l.29518 via \code{\LinkA {options}{options}(encoding=)}: see the examples. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29520 \item[\code{skipNul}] logical: should nuls be skipped? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29521 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29522 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29524 \begin{Details} \relax ! Undefined control sequence. l.29525 If the \code {con} is a character string, the function calls ! Undefined control sequence. l.29526 \code {\LinkA{file}{file}} to obtain a file connection which is opene... ! Undefined control sequence. l.29526 \code{\LinkA {file}{file}} to obtain a file connection which is opene... ! Undefined control sequence. l.29530 is not open, it is opened in \code {"rt"} mode for the duration of ! Undefined control sequence. l.29543 being read, with a warning (unless \code {skipNul = TRUE} or \code{warn ! Undefined control sequence. l.29543 ... (unless \code{skipNul = TRUE} or \code {warn ! Undefined control sequence. l.29546 If \code {con} is a not-already-open \LinkA{connection}{connection} w... ! Undefined control sequence. l.29546 If \code{con} is a not-already-open \LinkA {connection}{connection} w... ! Undefined control sequence. l.29547 \code {encoding} argument, the text is converted to UTF-8 and declared ! Undefined control sequence. l.29548 as such (and the \code {encoding} argument to \code{readLines} is ign... ! Undefined control sequence. l.29548 ...d the \code{encoding} argument to \code {readLines} is ignored). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29550 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29552 \begin{Value} ! Undefined control sequence. l.29555 ...esult have a declared encoding if \code {encoding} is ! Undefined control sequence. l.29556 \code {"latin1"} or \code{"UTF-8"}, ! Undefined control sequence. l.29556 \code{"latin1"} or \code {"UTF-8"}, ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29557 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29559 \begin{Note} \relax ! Undefined control sequence. l.29560 The default connection, \code {\LinkA{stdin}{stdin}}, may be differen... ! Undefined control sequence. l.29560 The default connection, \code{\LinkA {stdin}{stdin}}, may be differen... ! Undefined control sequence. l.29561 \code {con = "stdin"}: see \code{\LinkA{file}{file}}. ! Undefined control sequence. l.29561 \code{con = "stdin"}: see \code {\LinkA{file}{file}}. ! Undefined control sequence. l.29561 \code{con = "stdin"}: see \code{\LinkA {file}{file}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29562 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29564 \begin{SeeAlso} \relax ! Undefined control sequence. l.29565 \code {\LinkA{connections}{connections}}, \code{\LinkA{writeLines}{wr... ! Undefined control sequence. l.29565 \code{\LinkA {connections}{connections}}, \code{\LinkA{writeLines}{wr... ! Undefined control sequence. l.29565 ...LinkA{connections}{connections}}, \code {\LinkA{writeLines}{writeL... ! Undefined control sequence. l.29565 ...onnections}{connections}}, \code{\LinkA {writeLines}{writeLines}},... ! Undefined control sequence. l.29565 ...{\LinkA{writeLines}{writeLines}}, \code {\LinkA{readBin}{readBin}}, ! Undefined control sequence. l.29565 ...{writeLines}{writeLines}}, \code{\LinkA {readBin}{readBin}}, ! Undefined control sequence. l.29566 \code {\LinkA{scan}{scan}} ! Undefined control sequence. l.29566 \code{\LinkA {scan}{scan}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29567 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29569 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [26 l.29570 \begin{ExampleCode} ! Undefined control sequence. l.29572 sep = "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.29574 unlink("ex.data") # tidy up ! You can't use `macro parameter character #' in vertical mode. l.29576 # # difference in blocking ! You can't use `macro parameter character #' in vertical mode. l.29576 ## difference in blocking ! Undefined control sequence. l.29577 cat("123\nabc ", file = "test1") ! You can't use `macro parameter character #' in horizontal mode. l.29578 readLines("test1") # line with a warning ! You can't use `macro parameter character #' in horizontal mode. l.29581 readLines(con) # empty ! Undefined control sequence. l.29582 cat(" def\n ", file = "test1", append = TRUE) ! You can't use `macro parameter character #' in horizontal mode. l.29583 readLines(con) # gets both ! You can't use `macro parameter character #' in horizontal mode. l.29586 unlink("test1") # tidy up ! You can't use `macro parameter character #' in vertical mode. l.29588 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.29588 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.29589 # read a 'Windows Unicode' file ! You can't use `macro parameter character #' in horizontal mode. l.29592 unique(Encoding(A)) # will most likely be UTF-8 Underfull \hbox (badness 1968) in paragraph at lines 29588--29593 []\OT1/cmr/m/n/10 Not run: read a 'Win-dows Uni-code' file A <- read-Lines(con <- ! You can't use `macro parameter character #' in vertical mode. l.29594 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.29594 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29595 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29596 \end{Examples} ! Undefined control sequence. l.29597 \HeaderA {readRDS}{Serialization Interface for Single Objects}{readRDS} ! Undefined control sequence. l.29598 \aliasA {saveRDS}{readRDS}{saveRDS} ! Undefined control sequence. l.29599 \keyword {file}{readRDS} ! Undefined control sequence. l.29600 \keyword {connection}{readRDS} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29602 \begin{Description} \relax ! Undefined control sequence. l.29603 Functions to write a single \R {} object to a file, and to restore it. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29604 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29606 \begin{Usage} ] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29613 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29615 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29616 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29617 \item[\code{object}] \R{} object to serialize. ! Undefined control sequence. l.29617 \item[\code{object}] \R {} object to serialize. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29618 \item[\code{file}] a \LinkA{connection}{connection} or the name of t... ! Undefined control sequence. l.29618 \item[\code{file}] a \LinkA {connection}{connection} or the name of t... ! Undefined control sequence. l.29618 ...n} or the name of the file where the \R {} object ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29620 \item[\code{ascii}] a logical. If \code{TRUE} or \code{NA}, an ASCII ! Undefined control sequence. l.29620 \item[\code{ascii}] a logical. If \code {TRUE} or \code{NA}, an ASCII ! Undefined control sequence. l.29620 ...i}] a logical. If \code{TRUE} or \code {NA}, an ASCII ! Undefined control sequence. l.29622 See the comments in the help for \code {\LinkA{save}{save}}. ! Undefined control sequence. l.29622 ...e comments in the help for \code{\LinkA {save}{save}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29623 \item[\code{version}] the workspace format version to use. \code{NULL} ! Undefined control sequence. l.29623 ...workspace format version to use. \code {NULL} [287 [27]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29626 \item[\code{compress}] a logical specifying whether saving to a name... ! Undefined control sequence. l.29627 to use \code {"gzip"} compression, or one of \code{"gzip"}, ! Undefined control sequence. l.29627 ...de{"gzip"} compression, or one of \code {"gzip"}, ! Undefined control sequence. l.29628 \code {"bzip2"} or \code{"xz"} to indicate the type of compression to ! Undefined control sequence. l.29628 \code{"bzip2"} or \code {"xz"} to indicate the type of compression to ! Undefined control sequence. l.29629 be used. Ignored if \code {file} is a connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29630 \item[\code{refhook}] a hook function for handling reference objects. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29631 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29632 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29634 \begin{Details} \relax ! Undefined control sequence. l.29635 ...s provide the means to save a single \R {} object to a ! Undefined control sequence. l.29637 ...ifferent name. This differs from \code {\LinkA{save}{save}} ! Undefined control sequence. l.29637 ...t name. This differs from \code{\LinkA {save}{save}} ! Undefined control sequence. l.29638 and \code {\LinkA{load}{load}}, which save and restore one or more named ! Undefined control sequence. l.29638 and \code{\LinkA {load}{load}}, which save and restore one or more named ! Undefined control sequence. l.29639 ...nvironment. They are widely used by \R {} itself, for ! Undefined control sequence. l.29641 \code {\LinkA{help.search}{help.search}} databases: the \code{".rds"}... ! Undefined control sequence. l.29641 \code{\LinkA {help.search}{help.search}} databases: the \code{".rds"}... ! Undefined control sequence. l.29641 ...rch}{help.search}} databases: the \code {".rds"} file extension ! Undefined control sequence. l.29644 Functions \code {\LinkA{serialize}{serialize}} and \code{\LinkA{unser... ! Undefined control sequence. l.29644 Functions \code{\LinkA {serialize}{serialize}} and \code{\LinkA{unser... ! Undefined control sequence. l.29644 ...\LinkA{serialize}{serialize}} and \code {\LinkA{unserialize}{unser... ! Undefined control sequence. l.29644 ...serialize}{serialize}} and \code{\LinkA {unserialize}{unserialize}} ! Undefined control sequence. l.29646 serialized to a connection by \code {serialize} can be read back by ! Undefined control sequence. l.29647 \code {readRDS} and conversely. ! Undefined control sequence. l.29650 been used since \R {} 1.4.0 (but extended from time to time as new ! Undefined control sequence. l.29651 object types have been added to \R {}). However, \code{save} writes a ! Undefined control sequence. l.29651 ...ve been added to \R{}). However, \code {save} writes a ! Undefined control sequence. l.29652 single line header (typically \code {"RDXs\bsl{}n"}) before the ! Undefined control sequence. l.29652 ... line header (typically \code{"RDXs\bsl {}n"}) before the ! Undefined control sequence. l.29656 ...led by the connection opened when \code {file} is a ! Undefined control sequence. l.29657 file name, so is only possible when \code {file} is a connection if ! Undefined control sequence. l.29658 handled by the connection. So e.g.~\code {\LinkA{url}{url}} ! Undefined control sequence. l.29658 ...y the connection. So e.g.~\code{\LinkA {url}{url}} ! Undefined control sequence. l.29659 ...l need to be wrapped in a call to \code {\LinkA{gzcon}{gzcon}}. ! Undefined control sequence. l.29659 ...to be wrapped in a call to \code{\LinkA {gzcon}{gzcon}}. ! Undefined control sequence. l.29663 must be in binary mode for \code {saveRDS(ascii = FALSE)} or to read ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29665 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29667 \begin{Value} ! Undefined control sequence. l.29668 For \code {readRDS}, an \R{} object. ! Undefined control sequence. l.29668 For \code{readRDS}, an \R {} object. ! Undefined control sequence. l.29670 For \code {saveRDS}, \code{NULL} invisibly. ! Undefined control sequence. l.29670 For \code{saveRDS}, \code {NULL} invisibly. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29671 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29673 \begin{SeeAlso} \relax ! Undefined control sequence. l.29674 \code {\LinkA{serialize}{serialize}}, \code{\LinkA{save}{save}} and \... ! Undefined control sequence. l.29674 \code{\LinkA {serialize}{serialize}}, \code{\LinkA{save}{save}} and \... ! Undefined control sequence. l.29674 \code{\LinkA{serialize}{serialize}}, \code {\LinkA{save}{save}} and \... ! Undefined control sequence. l.29674 ...kA{serialize}{serialize}}, \code{\LinkA {save}{save}} and \code{\L... ! Undefined control sequence. l.29674 ...}}, \code{\LinkA{save}{save}} and \code {\LinkA{load}{load}}. ! Undefined control sequence. l.29674 ...de{\LinkA{save}{save}} and \code{\LinkA {load}{load}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29677 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29679 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29680 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29681 # # save a single object to file ! You can't use `macro parameter character #' in horizontal mode. l.29681 ## save a single object to file ! You can't use `macro parameter character #' in horizontal mode. l.29683 # # restore it under a different name ! You can't use `macro parameter character #' in horizontal mode. l.29683 ## restore it under a different name ! You can't use `macro parameter character #' in horizontal mode. l.29686 # # or examine the object via a connection, which will be opened as n... ! You can't use `macro parameter character #' in horizontal mode. l.29686 ## or examine the object via a connection, which will be opened as n... ! You can't use `macro parameter character #' in vertical mode. l.29691 # # Less convenient ways to restore the object ! You can't use `macro parameter character #' in vertical mode. l.29691 ## Less convenient ways to restore the object ! You can't use `macro parameter character #' in horizontal mode. l.29692 # # which demonstrate compatibility with unserialize() ! You can't use `macro parameter character #' in horizontal mode. l.29692 ## which demonstrate compatibility with unserialize() ! You can't use `macro parameter character #' in horizontal mode. l.29697 wm <- readBin(con, "raw", n = 1e4) # size is a guess ! You can't use `macro parameter character #' in vertical mode. l.29701 # # Format compatibility with serialize(): ! You can't use `macro parameter character #' in vertical mode. l.29701 ## Format compatibility with serialize(): ! You can't use `macro parameter character #' in horizontal mode. l.29703 serialize(women, con) # ASCII, uncompressed ! You can't use `macro parameter character #' in horizontal mode. l.29707 serialize(women, con) # binary, bzip2-compressed ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29712 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29713 \end{Examples} ! Undefined control sequence. l.29714 \HeaderA {readRenviron}{Set Env Underfull \hbox (badness 10000) in paragraph at lines 2482--2484 [][][]@smallrm The changes are linked from [][]@smalltt https://isocpp.org/std/ standing-documents/ [28ironment Variables from a File}{readRe... ! Undefined control sequence. l.29715 \keyword {file}{readRenviron} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29717 \begin{Description} \relax ! Undefined control sequence. l.29718 Read as file such as \file {.Renviron} or \file{Renviron.site} in the ! Undefined control sequence. l.29718 ... file such as \file{.Renviron} or \file {Renviron.site} in the ! Undefined control sequence. l.29719 format described in the help for \LinkA {Startup}{Startup}, and set e... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29721 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29723 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29727 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29729 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29730 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29731 \item[\code{path}] A length-one character vector giving the path to the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29733 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29734 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29736 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29739 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29741 \begin{SeeAlso} \relax ! Undefined control sequence. l.29742 \code {\LinkA{Startup}{Startup}} for the file format. ! Undefined control sequence. l.29742 \code{\LinkA {Startup}{Startup}} for the file format. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29743 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29745 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29746 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29747 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.29747 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.29748 # # re-read a startup file (or read it in a vanilla session) ! You can't use `macro parameter character #' in horizontal mode. l.29748 ## re-read a startup file (or read it in a vanilla session) [288]] ! You can't use `macro parameter character #' in vertical mode. l.29751 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.29751 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29752 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29753 \end{Examples} ! Undefined control sequence. l.29754 \HeaderA {Recall}{Recursive Calling}{Recall} ! Undefined control sequence. l.29755 \keyword {programming}{Recall} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29757 \begin{Description} \relax ! Undefined control sequence. l.29758 \code {Recall} is used as a placeholder for the name of the function ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29761 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29763 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29767 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29769 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29770 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29771 \item[\code{...}] all the arguments to be passed. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29772 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29773 \end{Arguments} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29775 \begin{Note} \relax ! Undefined control sequence. l.29776 \code {Recall} will not work correctly when passed as a function ! Undefined control sequence. l.29777 argument, e.g.~to the \code {apply} family of functions. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29778 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29780 \begin{SeeAlso} \relax ! Undefined control sequence. l.29781 \code {\LinkA{do.call}{do.call}} and \code{\LinkA{call}{call}}. ! Undefined control sequence. l.29781 \code{\LinkA {do.call}{do.call}} and \code{\LinkA{call}{call}}. ! Undefined control sequence. l.29781 \code{\LinkA{do.call}{do.call}} and \code {\LinkA{call}{call}}. ! Undefined control sequence. l.29781 ...nkA{do.call}{do.call}} and \code{\LinkA {call}{call}}. ! Undefined control sequence. l.29783 \code {\LinkA{local}{local}} for another way to write anonymous recur... ! Undefined control sequence. l.29783 \code{\LinkA {local}{local}} for another way to write anonymous recur... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29784 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29786 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29787 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29788 # # A trivial (but inefficient!) example: ! You can't use `macro parameter character #' in horizontal mode. l.29788 ## A trivial (but inefficient!) example: ! You can't use `macro parameter character #' in horizontal mode. l.29792 # # renaming wouldn't work without Recall ! You can't use `macro parameter character #' in horizontal mode. l.29792 ## renaming wouldn't work without Recall ! You can't use `macro parameter character #' in horizontal mode. l.29793 fibonacci(10) # 55 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29794 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29795 \end{Examples} ! Undefined control sequence. l.29796 \HeaderA {reg.finalizer}{Finalization of Objects}{reg.finalizer} ! Undefined control sequence. l.29797 \aliasA {finalizer}{reg.finalizer}{finalizer} ! Undefined control sequence. l.297 [2998 \keyword {programming}{reg.finalizer} ! Undefined control sequence. l.29799 \keyword {environment}{reg.finalizer} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29801 \begin{Description} \relax ! Undefined control sequence. l.29802 Registers an \R {} function to be called upon garbage collection of ! Undefined control sequence. l.29803 object or (optionally) at the end of an \R {} session. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29804 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29806 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29810 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29812 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29813 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29814 \item[\code{e}] Object to finalize. Must be an environment or an ex... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29815 \item[\code{f}] Function to call on finalization. Must accept a sing... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29817 \item[\code{onexit}] logical: should the finalizer be run if the obj... ! Undefined control sequence. l.29818 still uncollected at the end of the \R {} session? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29819 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29820 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29822 \begin{Details} \relax ! Undefined control sequence. l.29825 ...are no longer referenced from within \R {}. This only makes sense ! Undefined control sequence. l.29830 the end of an \R {} session without manipulating \code{\LinkA{.Last}{... ! Undefined control sequence. l.29830 ...\R{} session without manipulating \code {\LinkA{.Last}{.Last}}. ! Undefined control sequence. l.29830 ...ssion without manipulating \code{\LinkA {.Last}{.Last}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29835 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29837 \begin{Value} ! Undefined control sequence. l.29838 \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29839 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29841 \begin{Note} \relax ! Undefined control sequence. l.29842 \R {}'s interpreter is not re-entrant and the finalizer could be run in ! Undefined control sequence. l.29844 potentially unsafe to call from \code {f}: one example which caused ! Undefined control sequence. l.29845 trouble is \code {\LinkA{options}{options}}. Finalizers are ! Undefined control sequence. l.29845 trouble is \code{\LinkA {options}{options}}. Finalizers are ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29848 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29850 \begin{SeeAlso} \relax ! Undefined control sequence. l.29851 \code {\LinkA{gc}{gc}} and \code{\LinkA{Memory}{Memory}} for garbage ... ! Undefined control sequence. l.29851 \code{\LinkA {gc}{gc}} and \code{\LinkA{Memory}{Memory}} for garbage ... ! Undefined control sequence. l.29851 \code{\LinkA{gc}{gc}} and \code {\LinkA{Memory}{Memory}} for garbage ... ! Undefined control sequence. l.29851 \code{\LinkA{gc}{gc}} and \code{\LinkA {Memory}{Memory}} for garbage ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29853 \end{SeeAlso} ] ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29855 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29856 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.29860 invisible(gc()) # trigger cleanup ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29861 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29862 \end{Examples} ! Undefined control sequence. l.29863 \HeaderA {regex}{Regular Expressions as used in R}{regex} ! Undefined control sequence. l.29864 \aliasA {regexp}{regex}{regexp} ! Undefined control sequence. l.29865 \aliasA {regular expression}{regex}{regular expression} ! Undefined control sequence. l.29866 \keyword {character}{regex} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29868 \begin{Description} \relax ! Undefined control sequence. l.29870 \code {\LinkA{grep}{grep}} and related functions \code{grepl}, \code{... ! Undefined control sequence. l.29870 \code{\LinkA {grep}{grep}} and related functions \code{grepl}, \code{... ! Undefined control sequence. l.29870 ...rep}{grep}} and related functions \code {grepl}, \code{regexpr}, ! Undefined control sequence. l.29870 ...d related functions \code{grepl}, \code {regexpr}, ! Undefined control sequence. l.29871 \code {gregexpr}, \code{sub} and \code{gsub}, as well as by ! Undefined control sequence. l.29871 \code{gregexpr}, \code {sub} and \code{gsub}, as well as by ! Undefined control sequence. l.29871 \code{gregexpr}, \code{sub} and \code {gsub}, as well as by ! Undefined control sequence. l.29872 \code {\LinkA{strsplit}{strsplit}}. ! Undefined control sequence. l.29872 \code{\LinkA {strsplit}{strsplit}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29873 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29875 \begin{Details} \relax ! Undefined control sequence. l.29877 ...s of regular expressions are used in \R {}, ! Undefined control sequence. l.29879 ...like} regular expressions used by \code {perl = TRUE}. ! Undefined control sequence. l.29880 There is a also \code {fixed = TRUE} which can be considered to use a ! Undefined control sequence. l.29884 \code {grep}) include \code{apropos}, \code{browseEnv}, ! Undefined control sequence. l.29884 \code{grep}) include \code {apropos}, \code{browseEnv}, ! Undefined control sequence. l.29884 \code{grep}) include \code{apropos}, \code {browseEnv}, ! Undefined control sequence. l.29885 \code {help.search}, \code{list.files} and \code{ls}. ! Undefined control sequence. l.29885 \code{help.search}, \code {list.files} and \code{ls}. ! Undefined control sequence. l.29885 ...lp.search}, \code{list.files} and \code {ls}. [289 Overfull \hbox (39.30717pt too wide) in paragraph at lines 2605--2605 [] @texttt CXX="$(CXX11) $(CXX11STD)" CXXFLAGS="$(CXX11FLAGS) $(CXX 11PICFLAGS)")[] Underfull \hbox (badness 10000) in paragraph at lines 2653--2659 [][][][][]@smalltt See https://isocpp.org/std/standing-documents/sd-6-sg10-feat ure-test-recommendations[][][] @smallrm or [30] ! Undefined control sequence. l.29888 ... here as they would be printed by \code {cat}: ! Undefined control sequence. ...need to be doubled when entering \R {} character strings l.29890 character strings} , e.g.~from the keyboard). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29894 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29896 \begin{Section} {Extended Regular Expressions} ! Undefined control sequence. l.29898 mode of \code {grep}, \code{grep}, \code{regexpr}, \code{gregexpr}, ! Undefined control sequence. l.29898 mode of \code{grep}, \code {grep}, \code{regexpr}, \code{gregexpr}, ! Undefined control sequence. l.29898 mode of \code{grep}, \code{grep}, \code {regexpr}, \code{gregexpr}, ! Undefined control sequence. l.29898 ...ep}, \code{grep}, \code{regexpr}, \code {gregexpr}, ! Undefined control sequence. l.29899 \code {sub}, \code{gsub}, \code{regexec} and \code{strsplit}. They use ! Undefined control sequence. l.29899 \code{sub}, \code {gsub}, \code{regexec} and \code{strsplit}. They use ! Undefined control sequence. l.29899 \code{sub}, \code{gsub}, \code {regexec} and \code{strsplit}. They use ! Undefined control sequence. l.29899 ..., \code{gsub}, \code{regexec} and \code {strsplit}. They use ! Undefined control sequence. l.29902 used by \R {}. The implementation supports some extensions to the ! Undefined control sequence. l.29908 (read `character' as `byte' if \code {useBytes = TRUE}). ! Undefined control sequence. l.29915 \samp {. \bsl{} | ( ) [ \{ \textasciicircum{} \$ * + ?}, but note tha... ! Undefined control sequence. l.29915 \samp{. \bsl {} | ( ) [ \{ \textasciicircum{} \$ * + ?}, but note tha... ! Undefined control sequence. l.29920 \samp {\bsl{}a} as \samp{BEL}, \samp{\bsl{}e} as \samp{ESC}, \samp{\b... ! Undefined control sequence. l.29920 \samp{\bsl {}a} as \samp{BEL}, \samp{\bsl{}e} as \samp{ESC}, \samp{\b... ! Undefined control sequence. l.29920 \samp{\bsl{}a} as \samp {BEL}, \samp{\bsl{}e} as \samp{ESC}, \samp{\b... ! Undefined control sequence. l.29920 \samp{\bsl{}a} as \samp{BEL}, \samp {\bsl{}e} as \samp{ESC}, \samp{\b... ! Undefined control sequence. l.29920 \samp{\bsl{}a} as \samp{BEL}, \samp{\bsl {}e} as \samp{ESC}, \samp{\b... ! Undefined control sequence. l.29920 ... as \samp{BEL}, \samp{\bsl{}e} as \samp {ESC}, \samp{\bsl{}f} as ! Undefined control sequence. l.29920 ...L}, \samp{\bsl{}e} as \samp{ESC}, \samp {\bsl{}f} as ! Undefined control sequence. l.29920 ...samp{\bsl{}e} as \samp{ESC}, \samp{\bsl {}f} as ! Undefined control sequence. l.29921 \samp {FF}, \samp{\bsl{}n} as \samp{LF}, \samp{\bsl{}r} as \samp{CR} and ! Undefined control sequence. l.29921 \samp{FF}, \samp {\bsl{}n} as \samp{LF}, \samp{\bsl{}r} as \samp{CR} and ! Undefined control sequence. l.29921 \samp{FF}, ]\samp{\bsl {}n} as \samp{LF}, \samp{\bsl{}r} as \samp{CR} and ! Undefined control sequence. l.29921 \samp{FF}, \samp{\bsl{}n} as \samp {LF}, \samp{\bsl{}r} as \samp{CR} and ! Undefined control sequence. l.29921 ...FF}, \samp{\bsl{}n} as \samp{LF}, \samp {\bsl{}r} as \samp{CR} and ! Undefined control sequence. l.29921 ...\samp{\bsl{}n} as \samp{LF}, \samp{\bsl {}r} as \samp{CR} and ! Undefined control sequence. l.29921 ...} as \samp{LF}, \samp{\bsl{}r} as \samp {CR} and ! Undefined control sequence. l.29922 \samp {\bsl{}t} as \samp{TAB}. (Note that these will be interpreted by ! Undefined control sequence. l.29922 \samp{\bsl {}t} as \samp{TAB}. (Note that these will be interpreted by ! Undefined control sequence. l.29922 \samp{\bsl{}t} as \samp {TAB}. (Note that these will be interpreted by ! Undefined control sequence. l.29923 \R {}'s parser in literal character strings.) ! Undefined control sequence. l.29926 \samp {[} and \samp{]} which matches any single character in that list; ! Undefined control sequence. l.29926 \samp{[} and \samp {]} which matches any single character in that list; ! Undefined control sequence. l.29927 ...haracter of the list is the caret \samp {\textasciicircum{}}, when it ! Undefined control sequence. l.29929 regular expression \samp {[0123456789]} matches any single digit, and ! Undefined control sequence. l.29930 \samp {[\textasciicircum{}abc]} matches anything except the character... ! Undefined control sequence. l.29930 ...es anything except the characters \samp {a}, ! Undefined control sequence. l.29931 \samp {b} or \samp{c}. A range of characters may be specified by ! Undefined control sequence. l.29931 \samp{b} or \samp {c}. A range of characters may be specified by ! Undefined control sequence. l.29936 \samp {[ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz]}.\\{} (The ! Undefined control sequence. l.29940 ...epends on the \emph{locale} (see \LinkA {locales}{locales}); the ! Undefined control sequence. \samp {[:alnum:]} l.29945 \item[\samp{[:alnum:]}] Alphanumeric characters: \samp{[:alpha:]} ! Undefined control sequence. l.29945 ...lnum:]}] Alphanumeric characters: \samp {[:alpha:]} ! Undefined control sequence. l.29946 and \samp {[:digit:]}. ! Undefined control sequence. \samp {[:alpha:]} l.29948 \item[\samp{[:alpha:]}] Alphabetic characters: \samp{[:lower:]} and ! Undefined control sequence. l.29948 ...:alpha:]}] Alphabetic characters: \samp {[:lower:]} and ! Undefined control sequence. l.29949 \samp {[:upper:]}. ! Undefined control sequence. \samp {[:blank:]} l.29951 \item[\samp{[:blank:]}] Blank characters: space and tab, and ! Undefined control sequence. \samp {[:cntrl:]} l.29955 \item[\samp{[:cntrl:]}] ! Undefined control sequence. l.29957 000 through 037, and 177 (\code {DEL}). In another character set, ! Undefined control sequence. \samp {[:digit:]} l.29960 \item[\samp{[:digit:]}] Digits: \samp{0 1 2 3 4 5 6 7 8 9}. ! Undefined control sequence. l.29960 \item[\samp{[:digit:]}] Digits: \samp {0 1 2 3 4 5 6 7 8 9}. [290] [31 ! Undefined control sequence. \samp {[:graph:]} l.29962 \item[\samp{[:graph:]}] Graphical characters: \samp{[:alnum:]} and ! Undefined control sequence. l.29962 ...[:graph:]}] Graphical characters: \samp {[:alnum:]} and ! Undefined control sequence. l.29963 \samp {[:punct:]}. ! Undefined control sequence. \samp {[:lower:]} l.29965 \item[\samp{[:lower:]}] Lower-case letters in the current locale. ! Undefined control sequence. \samp {[:print:]} l.29967 \item[\samp{[:print:]}] ! Undefined control sequence. l.29968 Printable characters: \samp {[:alnum:]}, \samp{[:punct:]} and space. ! Undefined control sequence. l.29968 ...ble characters: \samp{[:alnum:]}, \samp {[:punct:]} and space. ! Undefined control sequence. \samp {[:punct:]} l.29970 \item[\samp{[:punct:]}] Punctuation characters:\\{} ! Undefined control sequence. l.29971 \samp {! " \# \$ \% \& ' ( ) * + , - . / : ; < = > ? @ [ \bsl{} ] \te... ! Undefined control sequence. l.29971 ... ' ( ) * + , - . / : ; < = > ? @ [ \bsl {} ] \textasciicircum{} \_... ! Undefined control sequence. \samp {[:space:]} l.29974 \item[\samp{[:space:]}] ! Undefined control sequence. \samp {[:upper:]} l.29978 \item[\samp{[:upper:]}] Upper-case letters in the current locale. ! Undefined control sequence. \samp {[:xdigit:]} l.29980 \item[\samp{[:xdigit:]}] Hexadecimal digits:\\{} ! Undefined control sequence. l.29981 \samp {0 1 2 3 4 5 6 7 8 9 A B C D E F a b c d e f}. ! Undefined control sequence. l.29986 For example, \samp {[[:alnum:]]} means \samp{[0-9A-Za-z]}, except the ! Undefined control sequence. l.29986 ...example, \samp{[[:alnum:]]} means \samp {[0-9A-Za-z]}, except the ! Undefined control sequence. l.29992 class. To include a literal \samp {]}, place it first in the list. ! Undefined control sequence. l.29993 Similarly, to include a literal \samp {\textasciicircum{}}, place it ... ! Undefined control sequence. l.29994 Finally, to include a literal \samp {-}, place it first or last (or, ! Undefined control sequence. l.29995 for \code {perl = TRUE} only, precede it by a backslash). (Only ! Undefined control sequence. l.29996 \samp {\textasciicircum{} - \bsl{} ]} are special inside character cl... ! Undefined control sequence. l.29996 \samp{\textasciicircum{} - \bsl {} ]} are special inside character cl... ! Undefined control sequence. l.29998 The period \samp {.} matches any single character. The symbol ! Undefined control sequence. l.29999 \samp {\bsl{}w} matches a `word' character (a synonym for ! Undefined control sequence. l.29999 \samp{\bsl {}w} matches a `word' character (a synonym for ! Undefined control sequence. l.30000 \samp {[[:alnum:]\_]}, an extension) and \samp{\bsl{}W} is its negation ! Undefined control sequence. l.30000 ...[[:alnum:]\_]}, an extension) and \samp {\bsl{}W} is its negation ! Undefined control sequence. l.30000 ...num:]\_]}, an extension) and \samp{\bsl {}W} is its negation ! Undefined control sequence. l.30001 (\samp {[\textasciicircum{}[:alnum:]\_]}). Symb]ols \samp{\bsl{}d}, \... ! Undefined control sequence. l.30001 ...icircum{}[:alnum:]\_]}). Symbols \samp {\bsl{}d}, \samp{\bsl{}s},... ! Undefined control sequence. l.30001 ...um{}[:alnum:]\_]}). Symbols \samp{\bsl {}d}, \samp{\bsl{}s}, \sam... ! Undefined control sequence. l.30001 ...:]\_]}). Symbols \samp{\bsl{}d}, \samp {\bsl{}s}, \samp{\bsl{}D} ! Undefined control sequence. l.30001 ...}). Symbols \samp{\bsl{}d}, \samp{\bsl {}s}, \samp{\bsl{}D} ! Undefined control sequence. l.30001 ...s \samp{\bsl{}d}, \samp{\bsl{}s}, \samp {\bsl{}D} ! Undefined control sequence. l.30001 ...mp{\bsl{}d}, \samp{\bsl{}s}, \samp{\bsl {}D} ! Undefined control sequence. l.30002 and \samp {\bsl{}S} denote the digit and space classes and their nega... ! Undefined control sequence. l.30002 and \samp{\bsl {}S} denote the digit and space classes and their nega... ! Undefined control sequence. l.30005 The caret \samp {\textasciicircum{}} and the dollar sign \samp{\$} ar... ! Undefined control sequence. l.30005 ...sciicircum{}} and the dollar sign \samp {\$} are metacharacters ! Undefined control sequence. l.30007 line. The symbols \samp {\bsl{}<} and \samp{\bsl{}>} match the empty... ! Undefined control sequence. l.30007 line. The symbols \samp{\bsl {}<} and \samp{\bsl{}>} match the empty... ! Undefined control sequence. l.30007 .... The symbols \samp{\bsl{}<} and \samp {\bsl{}>} match the empty ... ! Undefined control sequence. l.30007 ...e symbols \samp{\bsl{}<} and \samp{\bsl {}>} match the empty strin... ! Undefined control sequence. l.30008 ...ng and end of a word. The symbol \samp {\bsl{}b} matches the ! Undefined control sequence. l.30008 ...d end of a word. The symbol \samp{\bsl {}b} matches the ! Undefined control sequence. l.30009 ...ing at either edge of a word, and \samp {\bsl{}B} matches the ! Undefined control sequence. l.30009 ...t either edge of a word, and \samp{\bsl {}B} matches the ! Undefined control sequence. \samp {?} l.30018 \item[\samp{?}] The preceding item is optional and will be matched ! Undefined control sequence. \samp {*} l.30021 \item[\samp{*}] The preceding item will be matched zero or more ! Undefined control sequence. \samp {+} l.30024 \item[\samp{+}] The preceding item will be matched one or more ! Undefined control sequence. \samp {\{n\}} l.30027 \item[\samp{\{n\}}] The preceding item is matched exactly \code{n} ! Undefined control sequence. l.30027 ...preceding item is matched exactly \code {n} ! Undefined control sequence. \samp {\{n,\}} l.30030 \item[\samp{\{n,\}}] The preceding item is matched \code{n} or more ! Undefined control sequence. l.30030 ...}}] The preceding item is matched \code {n} or more ! Undefined control sequence. \samp {\{n,m\}} l.30033 \item[\samp{\{n,m\}}] The preceding item is matched at least \code{n} ! Undefined control sequence. l.30033 ...receding item is matched at least \code {n} ! Undefined control sequence. l.30034 times, but not more than \code {m} times. ! Undefined control sequence. l.30040 \code {?} to the quantifier. (There are further quantifiers that allow [291] [32 ! Undefined control sequence. l.30047 ...y be joined by the infix operator \samp {|}; ! Undefined control sequence. l.30049 subexpression. For example, \samp {abba|cde} matches either the ! Undefined control sequence. l.30050 string \code {abba} or the string \code{cde}. Note that alternation ! Undefined control sequence. l.30050 string \code{abba} or the string \code {cde}. Note that alternation ! Undefined control sequence. l.30051 ...k inside character classes, where \samp {|} has its literal ! Undefined control sequence. l.30058 The backreference \samp {\bsl{}N}, where \samp{N = 1 ... 9}, matches ! Undefined control sequence. l.30058 The backreference \samp{\bsl {}N}, where \samp{N = 1 ... 9}, matches ! Undefined control sequence. l.30058 ...ckreference \samp{\bsl{}N}, where \samp {N = 1 ... 9}, matches ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30063 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30065 \begin{Section} {Perl-like Regular Expressions} ! Undefined control sequence. l.30066 The \code {perl = TRUE} argument to \code{grep}, \code{regexpr}, ! Undefined control sequence. l.30066 The \code{perl = TRUE} argument to \code {grep}, \code{regexpr}, ! Undefined control sequence. l.30066 ... = TRUE} argument to \code{grep}, \code {regexpr}, ! Undefined control sequence. l.30067 \code {gregexpr}, \code{sub}, \code{gsub} and \code{strsplit} switches ! Undefined control sequence. l.30067 \code{gregexpr}, \code {sub}, \code{gsub} and \code{strsplit} switches ! Undefined control sequence. l.30067 \code{gregexpr}, \code{sub}, \code {gsub} and \code{strsplit} switches ! Undefined control sequence. l.30067 ...xpr}, \code{sub}, \code{gsub} and \code {strsplit} switches ! Undefined control sequence. l.30073 PCRE2), especially \command {man pcrepattern} and \command{man ! Undefined control sequence. l.30073 ... \command{man pcrepattern} and \command {man ! Undefined control sequence. l.30075 \url {http://www.pcre.org}. (The version in use can be found by ! Undefined control sequence. l.30076 calling \code {\LinkA{extSoftVersion}{extSoftVersion}}. It need not ... ! Undefined control sequence. l.30076 calling \code{\LinkA {extSoftVersion}{extSoftVersion}}. It need not ... ! Undefined control sequence. l.30079 \url {http://www.pcre.org/original/doc/html/} should be a good match.) ! Undefined control sequence. l.30084 \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.30084 \code{\LinkA {Encoding}{Encoding}}). Underfull \hbox (badness 2119) in paragraph at lines 30081--30085 []\OT1/cmr/m/n/10 Perl reg-u-lar ex-pres-sions can be com-puted byte-by-byte or (UTF-8) ! Undefined control sequence. l.30087 are accepted except \samp {\bsl{}<} and \samp{\bsl{}>}: in Perl all b... ! Undefined control sequence. l.30087 are accepted except \samp{\bsl ] {}<} and \samp{\bsl{}>}: in Perl all b... ! Undefined control sequence. l.30087 ...ccepted except \samp{\bsl{}<} and \samp {\bsl{}>}: in Perl all bac... ! Undefined control sequence. l.30087 ...ed except \samp{\bsl{}<} and \samp{\bsl {}>}: in Perl all backslashed ! Undefined control sequence. l.30089 interpreted as a literal character. \samp {\{} is not special if it ! Undefined control sequence. l.30091 ...eferences (but the replacement in \code {\LinkA{sub}{sub}} ! Undefined control sequence. l.30091 ...es (but the replacement in \code{\LinkA {sub}{sub}} ! Undefined control sequence. l.30096 ...in UTF-8 mode. So in either case \samp {[A-Za-z]} specifies the ! Undefined control sequence. l.30100 see \samp {\bsl{}p} below for an alternative. ! Undefined control sequence. l.30100 see \samp{\bsl {}p} below for an alternative. ! Undefined control sequence. l.30102 The construct \samp {(?...)} is used for Perl extensions in a variety ! Undefined control sequence. l.30103 ...g on what immediately follows the \samp {?}. ! Undefined control sequence. l.30106 \samp {(?i)} (caseless, equivalent to Perl's \samp{/i}), \samp{(?m)} ! Undefined control sequence. l.30106 ...} (caseless, equivalent to Perl's \samp {/i}), \samp{(?m)} ! Undefined control sequence. l.30106 ... equivalent to Perl's \samp{/i}), \samp {(?m)} ! Undefined control sequence. l.30107 (multiline, equivalent to Perl's \samp {/m}), \samp{(?s)} (single line, ! Undefined control sequence. l.30107 ... equivalent to Perl's \samp{/m}), \samp {(?s)} (single line, ! Undefined control sequence. l.30109 \samp {/s}) and \samp{(?x)} (extended, whitespace data characters are ! Undefined control sequence. l.30109 \samp{/s}) and \samp {(?x)} (extended, whitespace data characters are ! Undefined control sequence. l.30111 \samp {/x}). These can be concatenated, so for example, \samp{(?im)} ! Undefined control sequence. l.30111 ... be concatenated, so for example, \samp {(?im)} ! Undefined control sequence. l.30114 and unsetting such as \samp {(?im-sx)}. These settings can be applied ! Undefined control sequence. l.30116 ...ional options not in Perl include \samp {(?U)} to set ! Undefined control sequence. l.30117 ...de (so matching is minimal unless \samp {?} is used [292] ! Undefined control sequence. l.30122 ...can do so by putting them between \samp {\bsl{}Q} and ! Undefined control sequence. l.30122 ...o so by putting them between \samp{\bsl {}Q} and ! Undefined control sequence. l.30123 \samp {\bsl{}E}. This is different from Perl in that \samp{\$} and \s... ! Undefined control sequence. l.30123 \samp{\bsl {}E}. This is different from Perl in that \samp{\$} and \s... ! Undefined control sequence. l.30123 ...is is different from Perl in that \samp {\$} and \samp{@} are ! Undefined control sequence. l.30123 ...t from Perl in that \samp{\$} and \samp {@} are ! Undefined control sequence. l.30124 handled as literals in \samp {\bsl{}Q...\bsl{}E} sequences in PCRE, w... ! Undefined control sequence. l.30124 handled as literals in \samp{\bsl {}Q...\bsl{}E} sequences in PCRE, w... ! Undefined control sequence. l.30124 ...led as literals in \samp{\bsl{}Q...\bsl {}E} sequences in PCRE, wh... ! Undefined control sequence. l.30125 Perl, \samp {\$} and \samp{@} cause variable interpolation. ! Undefined control sequence. l.30125 Perl, \samp{\$} and \samp {@} cause variable interpolation. ! Undefined control sequence. l.30127 The escape sequences \samp {\bsl{}d}, \samp{\bsl{}s} and \samp{\bsl{}... ! Undefined control sequence. l.30127 The escape sequences \samp{\bsl {}d}, \samp{\bsl{}s} and \samp{\bsl{}... ! Undefined control sequence. l.30127 The escape sequences \samp{\bsl{}d}, \samp {\bsl{}s} and \samp{\bsl{}... ! Undefined control sequence. l.30127 ...pe sequences \samp{\bsl{}d}, \samp{\bsl {}s} and \samp{\bsl{}w} re... ! Undefined control sequence. l.30127 ...samp{\bsl{}d}, \samp{\bsl{}s} and \samp {\bsl{}w} represent ! Undefined control sequence. l.30127 ...\bsl{}d}, \samp{\bsl{}s} and \samp{\bsl {}w} represent ! Undefined control sequence. l.30132 regarded as a space character in a \code {C} locale before PCRE 8.34. ! Undefined control sequence. l.30133 Sequences \samp {\bsl{}h}, \samp{\bsl{}v}, \samp{\bsl{}H} and \samp{\... ! Undefined control sequence. l.30133 Sequences \samp{\bsl {}h}, \samp{\bsl{}v}, \samp{\bsl{}H} and \samp{\... ! Undefined control sequence. l.30133 Sequences \samp{\bsl{}h}, \samp {\bsl{}v}, \samp{\bsl{}H} and \samp{\... ! Undefined control sequence. l.30133 Sequences \samp{\bsl{}h}, \samp{\bsl {}v}, \samp{\bsl{}H} and \samp{\... ! Undefined control sequence. l.30133 ...s \samp{\bsl{}h}, \samp{\bsl{}v}, \samp {\bsl{}H} and \samp{\bsl{}... ! Undefined control sequence. l.30133 ...mp{\bsl{}h}, \samp{\bsl{}v}, \samp{\bsl {}H} and \samp{\bsl{}V} match ! Undefined control sequence. l.30133 ...samp{\bsl{}v}, \samp{\bsl{}H} and \samp {\bsl{}V} match ! Undefined control sequence. l.30133 ...\bsl{}v}, \samp{\bsl{}H} and \samp{\bsl {}V} match ! Undefined control sequence. l.30137 ... are additional escape sequences: \samp {\bsl{}cx} is ! Undefined control sequence. l.30137 ...additional escape sequences: \samp{\bsl {}cx} i [33s ! Undefined control sequence. l.30138 \samp {cntrl-x} for any \samp{x}, \samp{\bsl{}ddd} is the ! Undefined control sequence. l.30138 \samp{cntrl-x} for any \samp {x}, \samp{\bsl{}ddd} is the ! Undefined control sequence. l.30138 \samp{cntrl-x} for any \samp{x}, \samp {\bsl{}ddd} is the ! Undefined control sequence. l.30138 ...p{cntrl-x} for any \samp{x}, \samp{\bsl {}ddd} is the ! Undefined control sequence. l.30140 interpretable as a backreference, as \samp {\bsl{}1} to \samp{\bsl{}7... ! Undefined control sequence. l.30140 ...table as a backreference, as \samp{\bsl {}1} to \samp{\bsl{}7} always ! Undefined control sequence. l.30140 ...ckreference, as \samp{\bsl{}1} to \samp {\bsl{}7} always ! Undefined control sequence. l.30140 ...erence, as \samp{\bsl{}1} to \samp{\bsl {}7} always ! Undefined control sequence. l.30141 are), and \samp {\bsl{}xhh} specifies a character by two hex digits. ! Undefined control sequence. l.30141 are), and \samp{\bsl {}xhh} specifies a character by two hex digits. ! Undefined control sequence. l.30142 In a UTF-8 locale, \samp {\bsl{}x\{h...\}} specifies a Unicode code p... ! Undefined control sequence. l.30142 In a UTF-8 locale, \samp{\bsl {}x\{h...\}} specifies a Unicode code p... ! Undefined control sequence. l.30144 interpreted by \R {}'s parser in literal character strings.) ! Undefined control sequence. l.30146 Outside a character class, \samp {\bsl{}A} matches at the start of a ! Undefined control sequence. l.30146 Outside a character class, \samp{\bsl {}A} matches at the start of a ! Undefined control sequence. l.30147 ...t (even in multiline mode, unlike \samp {\textasciicircum{}}), \sa... ! Undefined control sequence. l.30147 ...nlike \samp{\textasciicircum{}}), \samp {\bsl{}Z} matches ! Undefined control sequence. l.30147 ... \samp{\textasciicircum{}}), \samp{\bsl {}Z} matches ! Undefined control sequence. l.30148 ...t or before a newline at the end, \samp {\bsl{}z} ! Undefined control sequence. l.30148 ...before a newline at the end, \samp{\bsl {}z} ! Undefined control sequence. l.30149 ...hes only at end of a subject. and \samp {\bsl{}G} matches at first ! Undefined control sequence. l.30149 ...nly at end of a subject. and \samp{\bsl {}G} matches at first ! Undefined control sequence. l.30151 end of the previous match). \samp {\bsl{}C} matches a single ! Undefined control sequence. l.30151 end of the previous match). \samp{\bsl {}C} matches a single ! Undefined control sequence. l.30153 mode, \samp {\bsl{}R} matches any Unicode newline character (not just... ! Undefined control sequence. l.30153 mode, \samp{\bsl {}R} matches any Unicode newline character (not just... ! Undefined control sequence. l.30154 and \samp {\bsl{}X} matches any number of Unicode characters that for... ! Undefined control sequence. l.30154 and \samp{\bsl {}X} matches any number of Unicode characters that for... ! Undefined control sequence. l.30158 \samp {\bsl{}p\{xx\}} and \samp{\bsl{}P\{xx\}} which match characters... ! Undefined control sequence. l.30158 \samp{\bsl {}p\{xx\}} and \samp{\bsl{}P\{xx\}} which match characters... ! Undefined control sequence. l.30158 \samp{\bsl{}p\{xx\}} and \samp {\bsl{}P\{xx\}} which match characters... ! Undefined control sequence. l.30158 \samp{\bsl{}p\{xx\}} and \samp{\bsl {}P\{xx\}} which match characters... ! Undefined control sequence. l.30159 without property \samp {xx} respectively. For a list of supported ! Undefined control sequence. l.30160 ...RE documentation, but for example \samp {Lu} is ! Undefined control sequence. l.30161 `upper case letter' and \samp {Sc} is `currency symbol'. ! Undefined control sequence. l.30164 \code {\LinkA{pcre\_config}{pcre.Rul.config}}.) ! Undefined control sequence. l.30164 \code{\LinkA {pcre\_config}{pcre.Rul.config}}.) ! Undefined control sequence. l.30166 The sequence \samp {(?\#} marks the start of a comment which continues ! Undefined control sequence. l.30171 ...ended option is set, an unescaped \samp {\#} character outside ! Undefined control sequence. l.30175 The pattern \samp {(?:...)} groups characters just as parentheses do ! Undefined control sequence. l.30178 Patterns \samp {(?=...)} and \samp{(?!...)} are zero-width positive and ! Undefined control sequence. l.30178 Patterns \samp{(?=...)} and \samp {(?!...)} are zero-width positive and ! Undefined control sequence. l.30180 match the \code {...} forward from the current position would succeed ! Undefined control sequence. l.30182 Patterns \samp {(?<=...)} and \samp{(?[A-Z][a-z]+)"} then the ! Undefined control sequence. l.30189 backreferences are not supported by \code {sub}.) [293]] ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30193 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30195 \begin{Author} \relax ! Undefined control sequence. l.30197 standard, and the \code {pcrepattern} man page from PCRE 8.36. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30198 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30200 \begin{SeeAlso} \relax ! Undefined control sequence. l.30201 \code {\LinkA{grep}{grep}}, \code{\LinkA{apropos}{apropos}}, \code{\L... ! Undefined control sequence. l.30201 \code{\LinkA {grep}{grep}}, \code{\LinkA{apropos}{apropos}}, \code{\L... ! Undefined control sequence. l.30201 \code{\LinkA{grep}{grep}}, \code {\LinkA{apropos}{apropos}}, \code{\L... ! Undefined control sequence. l.30201 \code{\LinkA{grep}{grep}}, \code{\LinkA {apropos}{apropos}}, \code{\L... ! Undefined control sequence. l.30201 ... \code{\LinkA{apropos}{apropos}}, \code {\LinkA{browseEnv}{browseE... ! Undefined control sequence. l.30201 ...\LinkA{apropos}{apropos}}, \code{\LinkA {browseEnv}{browseEnv}}, ! Undefined control sequence. l.30202 \code {\LinkA{glob2rx}{glob2rx}}, \code{\LinkA{help.search}{help.sear... ! Undefined control sequence. l.30202 \code{\LinkA {glob2rx}{glob2rx}}, \code{\LinkA{help.search}{help.sear... ! Undefined control sequence. l.30202 \code{\LinkA{glob2rx}{glob2rx}}, \code {\LinkA{help.search}{help.sear... ! Undefined control sequence. l.30202 ...\LinkA{glob2rx}{glob2rx}}, \code{\LinkA {help.search}{help.search}... ! Undefined control sequence. l.30202 ...LinkA{help.search}{help.search}}, \code {\LinkA{list.files}{list.f... ! Undefined control sequence. l.30202 ...elp.search}{help.search}}, \code{\LinkA {list.files}{list.files}}, ! Undefined control sequence. l.30203 \code {\LinkA{ls}{ls}} and \code{\LinkA{strsplit}{strsplit}}. ! Undefined control sequence. l.30203 \code{\LinkA {ls}{ls}} and \code{\LinkA{strsplit}{strsplit}}. ! Undefined control sequence. l.30203 \code{\LinkA{ls}{ls}} and \code {\LinkA{strsplit}{strsplit}}. ! Undefined control sequence. l.30203 \code{\LinkA{ls}{ls}} and \code{\LinkA {strsplit}{strsplit}}. ! Undefined control sequence. l.30206 \url {http://laurikari.net/tre/documentation/regex-syntax/}). ! Undefined control sequence. l.30209 \url {http://pubs.opengroup.org/onlinepubs/9699919799/basedefs/V1_cha... ! Missing $ inserted. $ l.30209 ....org/onlinepubs/9699919799/basedefs/V1_ chap09.html} ! Extra }, or forgotten $. l.30209 ...ubs/9699919799/basedefs/V1_chap09.html} ! Missing $ inserted. $ l.30210 Overfull \hbox (141.43025pt too wide) in paragraph at lines 30208--30210 []\OT1/cmr/m/n/10 The POSIX 1003.2 stan-dard at http://pubs.opengroup.org/onlin epubs/9699919799/basedefs/V1$[]\OML/cmm/m/it/10 hap\OT1/cmr/m/n/10 09\OML/cmm/m /it/10 :html$ ! Undefined control sequence. l.30211 The \code {pcrepattern} \command{man} page (found as part of ! Undefined control sequence. l.30211 The \code{pcrepattern} \command {man} page (found as part of ! Undefined control sequence. l.30212 \url {http://www.pcre.org/original/pcre.txt}), and details of Perl's own ! Undefined control sequence. l.30213 implementation at \url {http://perldoc.perl.org/perlre.html}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30214 \end{SeeAlso} ! Missing } inserted. } l.30214 \end{SeeAlso} ! Undefined control sequence. l.30215 \HeaderA {regmatches}{Extract or Replace Matched Substrings}{regmatches} ! Undefined control sequence. l.30216 \aliasA {regmatches<\Rdash{}}{regmatches}{regmatches<.Rdash.} ! Undefined control sequence. l.30216 \aliasA{regmatches<\Rdash {}}{regmatches}{regmatches<.Rdash.} ! Undefined control sequence. l.30217 \keyword {character}{regmatches} ! Undefined control sequence. l.30218 \keyword {utilities}{regmatches} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30220 \begin{Description} \relax ! Undefined control sequence. l.30222 \code {\LinkA{regexpr}{regexpr}}, \code{\LinkA{gregexpr}{gregexpr}} or ! Undefined control sequence. l.30222 \code{\LinkA {regexpr}{regexpr}}, \code{\LinkA{gregexpr}{gregexpr}} or ! Undefined control sequence. l.30222 \code{\LinkA{regexpr}{regexpr}}, \code {\LinkA{gregexpr}{gregexpr}} or ! Undefined control sequence. l.30222 ...\LinkA{regexpr}{regexpr}}, \code{\LinkA {gregexpr}{gregexpr}} or ! Undefined control sequence. l.30223 \code {\LinkA{regexec}{regexec}}. ! Undefined control sequence. l.30223 \code{\LinkA {regexec}{regexec}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30224 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30226 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 30211--30227 []\OT1/cmr/m/n/10 The pcrepat-tern man page (found as part of Underfull \hbox (badness 10000) in paragraph at lines 30211--30227 \OT1/cmr/m/n/10 Matched Sub-stringsreg-matches reg-matches for immediate help. ... l.30231 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30233 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30234 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30235 \item[\code{x}] a character vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30236 \item[\code{m}] an object with match data ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30237 \item[\code{invert}] a logical: if \code{TRUE}, extract or replace the ! Undefined control sequence. l.30237 \item[\code{invert}] a logical: if \code {TRUE}, extract or replace the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30239 \item[\code{value}] an object with suitable replacement values for the ! Undefined control sequence. l.30240 ...ed or non-matched substrings (see \code {Details}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30241 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30242 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30244 \begin{Details} \relax ! Undefined control sequence. l.30245 If \code {invert} is \code{FALSE} (default), \code{regmatches} extracts ! Undefined control sequence. l.30245 If \code{invert} is \code {FALSE} (default), \code{regmatches} extracts ! Undefined control sequence. l.30245 ...nvert} is \code{FALSE} (default), \code {regmatches} extracts ! Undefined control sequence. l.30247 match data (as obtained from \code {\LinkA{regexpr}{regexpr}}), empty... ! Undefined control sequence. l.30247 match data (as obtained from \code{\LinkA {regexpr} [34{regexpr}}), empty... ! Undefined control sequence. l.30251 If \code {invert} is \code{TRUE}, \code{regmatches} extracts the ! Undefined control sequence. l.30251 If \code{invert} is \code {TRUE}, \code{regmatches} extracts the ! Undefined control sequence. l.30251 If \code{invert} is \code{TRUE}, \code {regmatches} extracts the ! Undefined control sequence. l.30253 matches similar to \code {\LinkA{strsplit}{strsplit}} (for vector mat... ! Undefined control sequence. l.30253 matches similar to \code{\LinkA {strsplit}{strsplit}} (for vector mat... ! Undefined control sequence. l.30256 If \code {invert} is \code{NA}, \code{regmatches} extracts both ! Undefined control sequence. l.30256 If \code{invert} is \code {NA}, \code{regmatches} extracts both ! Undefined control sequence. l.30256 If \code{invert} is \code{NA}, \code {regmatches} extracts both ! Undefined control sequence. l.30262 matching on a modified version of \code {x} with the same numbers of ! Undefined control sequence. l.30266 ...rings. For vector match data, if \code {invert} is ! Undefined control sequence. l.30267 \code {FALSE}, \code{value} should be a character vector with length the ! Undefined control sequence. l.30267 \code{FALSE}, \code {value} should be a character vector with length the ! Undefined control sequence. l.30268 number of matched elements in \code {m}. Otherwise, it should be a ! Undefined control sequence. l.30269 ...r vectors with the same length as \code {m}, each as ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30273 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30275 \begin{Value} ! Undefined control sequence. l.30276 For \code {regmatches}, a character vector with the matched substrings ! Undefined control sequence. l.30277 if \code {m} is a vector and \code{invert} is \code{FALSE}. Otherwise, ! Undefined control sequence. l.30277 if \code{m} is a vector and \code {invert} is \code{FALSE}. Otherwise, ! Undefined control sequence. l.30277 ... is a vector and \code{invert} is \code {FALSE}. Otherwise, ! Undefined control sequence. l.30280 For \code {regmatches<-}, the updated character vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30281 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30283 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30284 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30287 # # Match data from regexpr() ! You can't use `macro parameter character #' in horizontal mode. l.30287 ## Match data from regexpr() ! You can't use `macro parameter character #' in horizontal mode. l.30291 # # Match data from gregexpr() ! You can't use `macro parameter character #' in horizontal mode. l.30291 ## Match data from gregexpr() [294]] ! You can't use `macro parameter character #' in vertical mode. l.30296 # # Consider ! You can't use `macro parameter character #' in vertical mode. l.30296 ## Consider ! You can't use `macro parameter character #' in horizontal mode. l.30298 # # Suppose we want to split at the comma (plus spaces) between the ! You can't use `macro parameter character #' in horizontal mode. l.30298 ## Suppose we want to split at the comma (plus spaces) between the ! You can't use `macro parameter character #' in horizontal mode. l.30299 # # persons, but not at the commas in the parenthesized hobby lists. ! You can't use `macro parameter character #' in horizontal mode. l.30299 ## persons, but not at the commas in the parenthesized hobby lists. ! You can't use `macro parameter character #' in horizontal mode. l.30300 # # One idea is to "blank out" the parenthesized parts to match the ! You can't use `macro parameter character #' in horizontal mode. l.30300 ## One idea is to "blank out" the parenthesized parts to match the ! You can't use `macro parameter character #' in horizontal mode. l.30301 # # parts to be used for splitting, and extract the persons as the ! You can't use `macro parameter character #' in horizontal mode. l.30301 ## parts to be used for splitting, and extract the persons as the ! You can't use `macro parameter character #' in horizontal mode. l.30302 # # non-matched parts. ! You can't use `macro parameter character #' in horizontal mode. l.30302 ## non-matched parts. ! You can't use `macro parameter character #' in horizontal mode. l.30303 # # First, match the parenthesized hobby lists. ! You can't use `macro parameter character #' in horizontal mode. l.30303 ## First, match the parenthesized hobby lists. ! Missing $ inserted. $ l.30304 m <- gregexpr("\\([^ )]*\\)", x) ! You can't use `macro parameter character #' in math mode. l.30305 # # Write a little utility for creating blank strings with given numbers ! You can't use `macro parameter character #' in math mode. l.30305 ## Write a little utility for creating blank strings with given numbers ! You can't use `macro parameter character #' in math mode. l.30306 # # of characters. ! You can't use `macro parameter character #' in math mode. l.30306 ## of characters. ! You can't use `macro parameter character #' in math mode. l.30308 # # Create a copy of x with the parenthesized parts blanked out. ! You can't use `macro parameter character #' in math mode. l.30308 ## Create a copy of x with the parenthesized parts blanked out. ! You can't use `macro parameter character #' in math mode. l.30312 # # Compute the positions of the split matches (note that we cannot call ! You can't use `macro parameter character #' in math mode. l.30312 ## Compute the positions of the split matches (note that we cannot call ! You can't use `macro parameter character #' in math mode. l.30313 # # strsplit() on x with match data from s). ! You can't use `macro parameter character #' in math mode. l.30313 ## strsplit() on x with match data from s). ! You can't use `macro parameter character #' in math mode. l.30315 # # And finally extract the non-matched parts. ! You can't use `macro parameter character #' in math mode. l.30315 ## And finally extract the non-matched parts. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30317 \end{ExampleCode} ! Missing $ inserted. $ l.30317 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30318 \end{Examples} ! Undefined control sequence. l.30319 \HeaderA {remove}{Remove Objects from a Specified Environment}{remove} ! Undefined control sequence. l.30320 \aliasA {rm}{remove}{rm} ! Undefined control sequence. l.30321 \keyword {environment}{remove} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30323 \begin{Description} \relax ! Undefined control sequence. l.30324 \code {remove} and \code{rm} can be used to remove objects. These can ! Undefined control sequence. l.30324 \code{remove} and \code {rm} can be used to remove objects. These can ! Undefined control sequence. l.30326 vector \code {list}, or through a combination of both. All objects Overfull \hbox (54.27019pt too wide) in paragraph at lines 30296--30328 \OT1/cmr/m/n/10 )"\OML/cmm/m/it/10 ; x\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Writeal ittleutilityforcreatingblankstringswithgivennumbersofcharacters:blanks < Overfull \hbox (31.33412pt too wide) in paragraph at lines 30296--30328 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 strrep\OT1/cmr/m/n/10 (""\OML/cmm/m/it/10 ; n\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 Createacopyofxwiththeparenthesizedpartsblank edout:s < Overfull \hbox (433.03632pt too wide) in paragraph at lines 30296--30328 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 xregmatches\OT1/cmr/m/n/10 (\OML/cmm/m/it/ 10 s; m\OT1/cmr/m/n/10 ) \OML/cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/1 0 Map\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 blanks; lapply\OT1/cmr/m/n/10 (\OML/cmm/ m/it/10 regmatches\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 s; m\OT1/cmr/m/n/10 )\OML/c mm/m/it/10 ; nchar\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 sComputethepositionsofthes plitmatches\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 notethatwecannotcallstrsplit\OT1/c mr/m/n/10 ()\OML/cmm/m/it/10 onxwithmatchdatafroms\OT1/cmr/m/n/10 )\OML/cmm/m/i t/10 :m < Overfull \hbox (40.08423pt too wide) in paragraph at lines 30296--30328 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 gregexpr\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 ; \OMS/cmsy/m/n/10 ^^C\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; s\OT1/cmr/m/n/10 )\O ML/cmm/m/it/10 Andfinallyextractthenon \OMS/cmsy/m/n/10 ^^@ \OML/cmm/m/it/10 ma tchedparts:regmatches\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x; m; invert \OT1/cmr/m/ n/10 = ! Undefined control sequence. l.30329 If \code {envir} is NULL then the currently active environment is ! Undefined control sequence. l.30332 If \code {inherits} is \code{TRUE} then parents of the supplied ! Undefined control sequence. l.30332 If \code{inherits} is \code {TRUE} then parents of the supplied ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30336 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30338 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30346 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30348 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30349 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30350 \item[\code{...}] the objects to be removed, as names (unquoted) or ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30352 \item[\code{list}] a character vector naming objects to be removed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30353 \item[\code{pos}] where to do the removal. By default, uses the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30355 \item[\code{envir}] the \code{\LinkA{environment}{environment}} to u... ! Undefined control sequence. l.30355 \item[\code{envir}] the \code {\LinkA{environment}{environment}} to u... ! Undefined control sequence. l.30355 \item[\code{envir}] the \code{\LinkA {environment}{environment}} to u... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30356 \item[\code{inherits}] should the enclosing frames of the environmen... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30358 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30359 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30361 \begin{Details} \relax ! Undefined control sequence. l.30362 The \code {pos} argument can specify the environment from which to r... ! Undefined control sequence. l.30364 as an integer (the position in the \code {\LinkA{search}{search}} lis... ! Undefined control sequence. l.30364 ...teger (the position in the \code{\LinkA {search}{search}} list); as ! Undefined con [35> [35trol sequence. l.30366 \code {\LinkA{environment}{environment}} (including using \code{\Link... ! Undefined control sequence. l.30366 \code{\LinkA {environment}{environment}} (including using \code{\Link... ! Undefined control sequence. l.30366 ...t}{environment}} (including using \code {\LinkA{sys.frame}{sys.fra... ! Undefined control sequence. l.30366 ...ronment}} (including using \code{\LinkA {sys.frame}{sys.frame}} to ! Undefined control sequence. l.30368 The \code {envir} argument is an alternative way to specify an ! Undefined control sequence. l.30373 \code {\LinkA{lockEnvironment}{lockEnvironment}}). ! Undefined control sequence. l.30373 \code{\LinkA {lockEnvironment}{lockEnvironment}}). ! Undefined control sequence. l.30375 Earlier versions of \R {} incorrectly claimed that supplying a character ! Undefined control sequence. l.30376 vector in \code {...} removed the objects named in the character ! Undefined control sequence. l.30377 ...ed the character vector. Use the \code {list} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30379 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30381 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30385 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30387 \begin{SeeAlso} \relax ! Undefined control sequence. l.30388 \code {\LinkA{ls}{ls}}, \code{\LinkA{objects}{objects}} ! Undefined control sequence. l.30388 \code{\LinkA {ls}{ls}}, \code{\LinkA{objects}{objects}} ! Undefined control sequence. l.30388 \code{\LinkA{ls}{ls}}, \code {\LinkA{objects}{objects}} ! Undefined control sequence. l.30388 \code{\LinkA{ls}{ls}}, \code{\LinkA {objects}{objects}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30389 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30391 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30392 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30394 # # work with tmp and cleanup ! You can't use `macro parameter character #' in horizontal mode. l.30394 ## ] work with tmp and cleanup ! You can't use `macro parameter character #' in vertical mode. l.30397 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.30397 ## Not run: [295] [36]] ! You can't use `macro parameter character #' in horizontal mode. l.30398 # # remove (almost) everything in the working environment. ! You can't use `macro parameter character #' in horizontal mode. l.30398 ## remove (almost) everything in the working environment. ! You can't use `macro parameter character #' in horizontal mode. l.30399 # # You will get no warning, so don't do this unless you are really s... ! You can't use `macro parameter character #' in horizontal mode. l.30399 ## You will get no warning, so don't do this unless you are really s... ! You can't use `macro parameter character #' in vertical mode. l.30402 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.30402 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30403 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30404 \end{Examples} ! Undefined control sequence. l.30405 \HeaderA {rep}{Replicate Elements of Vectors and Lists}{rep} ! Undefined control sequence. l.30406 \methaliasA {rep.Date}{rep}{rep.Date} ! Undefined control sequence. l.30407 \methaliasA {rep.factor}{rep}{rep.factor} ! Undefined control sequence. l.30408 \methaliasA {rep.int}{rep}{rep.int} ! Undefined control sequence. l.30409 \methaliasA {rep.POSIXct}{rep}{rep.POSIXct} ! Undefined control sequence. l.30410 \methaliasA {rep.POSIXlt}{rep}{rep.POSIXlt} ! Undefined control sequence. l.30411 \aliasA {rep\_len}{rep}{rep.Rul.len} ! Undefined control sequence. l.30412 \keyword {manip}{rep} ! Undefined control sequence. l.30413 \keyword {chron}{rep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30415 \begin{Description} \relax ! Undefined control sequence. l.30416 \code {rep} replicates the values in \code{x}. It is a generic ! Undefined control sequence. l.30416 \code{rep} replicates the values in \code {x}. It is a generic Underfull \hbox (badness 10000) in paragraph at lines 30402--30418 []\OT1/cmr/m/n/10 End(Not run) repRepli-cate El-e-ments of Vec-tors and List- Underfull \hbox (badness 10000) in paragraph at lines 30402--30418 \OT1/cmr/m/n/10 srep rep.Datereprep.Date rep.factorreprep.factor rep.intreprep. int Underfull \hbox (badness 10000) in paragraph at lines 30402--30418 \OT1/cmr/m/n/10 rep.POSIXctreprep.POSIXct rep.POSIXltreprep.POSIXlt Underfull \hbox (badness 1817) in paragraph at lines 30402--30418 \OT1/cmr/m/n/10 rep[]lenreprep.Rul.len ma-niprep chron-rep rep repli-cates the val-ues in x. ! Undefined control sequence. l.30419 \code {rep.int} and \code{rep\_len} are faster simplified versions for ! Undefined control sequence. l.30419 \code{rep.int} and \code {rep\_len} are faster simplified versions for ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30421 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for for immediate help. ... l.30423 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30431 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30433 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30434 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30435 \item[\code{x}] a vector (of any mode including a \code{\LinkA{list}... ! Undefined control sequence. l.30435 ...a vector (of any mode including a \code {\LinkA{list}{list}}) or a... ! Undefined control sequence. l.30435 ...r (of any mode including a \code{\LinkA {list}{list}}) or a factor... ! Undefined control sequence. l.30436 \code {rep} only) a \code{POSIXct} or \code{POSIXlt} or \code{Date} ! Undefined control sequence. l.30436 \code{rep} only) a \code {POSIXct} or \code{POSIXlt} or \code{Date} ! Undefined control sequence. l.30436 \code{rep} only) a \code{POSIXct} or \code {POSIXlt} or \code{Date} ! Undefined control sequence. l.30436 ...ode{POSIXct} or \code{POSIXlt} or \code {Date} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30438 \item[\code{...}] further arguments to be passed to or from other me... ! Undefined control sequence. \code {times} l.30442 \item[\code{times}] an integer-valued vector giving the ! Undefined control sequence. l.30444 length \code {length(x)}, or to repeat the whole vector if of ! Undefined control sequence. l.30445 length 1. Negative or \code {NA} values are an error. A ! Undefined control sequence. l.30446 \code {double} vector is accepted, other inputs being coerced to ! Undefined control sequence. \code {length.out} l.30448 \item[\code{length.out}] non-negative integer. The desired length o... ! Undefined control sequence. l.30450 ... first element taken. Ignored if \code {NA} or invalid. ! Undefined control sequence. \code {each} l.30451 \item[\code{each}] non-negative integer. Each element of \code{x} ! Undefined control sequence. l.30451 ...egative integer. Each element of \code {x} ! Undefined control sequence. l.30452 is repeated \code {each} times. Other inputs will be coerced to ! Undefined control sequence. l.30454 \code {1} if \code{NA} Underfull \hbox (badness 2809) in paragraph at lines 3132--3138 @textrm (or set the en-vi-ron-ment vari-able @texttt _R_BUILD_KEEP_EMPTY_DIRS_[ ] @textrm to `@texttt TRUE[]@textrm '[], or have a [36or invalid. ! Undefined control sequence. l.30454 \code{1} if \code {NA} or invalid. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30459 \item[\code{times, length.out}] see \code{...} above. ! Undefined control sequence. l.30459 \item[\code{times, length.out}] see \code {...} above. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30460 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30461 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30463 \begin{Details} \relax ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30465 \begin{alltt} rep(x, times = 1, length.out = NA, each = 1) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30466 \end{alltt} ! Undefined control sequence. l.30468 arguments is specified, but if \code {each} is specified with either ! Undefined control sequence. l.30470 implied by \code {times} or \code{length.out}. ! Undefined control sequence. l.30470 implied by \code{times} or \code {length.out}. ! Undefined control sequence. l.30472 If \code {times} consists of a single integer, the result consists of ! Undefined control sequence. l.30473 ...put repeated this many times. If \code {times} is a ! Undefined control sequence. l.30474 vector of the same length as \code {x} (after replication by ! Undefined control sequence. l.30475 \code {each}), the result consists of \code{x[1]} repeated ! Undefined control sequence. l.30475 \code{each}), the result consists of \code {x[1]} repeated ! Undefined control sequence. l.30476 \code {times[1]} times, \code{x[2]} repeated \code{times[2]} times and ! Undefined control sequence. l.30476 \code{times[1]} times, \code {x[2]} repeated \code{times[2]} times and ! Undefined control sequence. l.30476 ...s[1]} times, \code{x[2]} repeated \code {times[2]} times and ! Undefined control sequence. l.30479 \code {length.out} may be given in place of \code{times}, ! Undefined control sequence. l.30479 ...gth.out} may be given in place of \code {times}, ! Undefined control sequence. l.30480 in which case \code {x} is repeated as many times as is ! Undefined control sequence. l.30482 \code {length.out} takes priority and \code{times} is ignored. ! Undefined control sequence. l.30482 \code{length.out} takes priority and \code {times} is ignored. ! Undefined control sequence. l.30484 Non-integer values of \code {times} will be truncated towards zero. ! Undefined control sequence. l.30485 If \code {times} is a computed quantity it is prudent to add a small ! Undefined control sequence. l.30486 fuzz or use \code {\LinkA{round}{round}}. And analogously for \code{... ! Undefined control sequence. l.30486 fuzz or use \code{\LinkA {round}{round}}. And analogously for \code{... ! Undefined control sequence. l.30486 ...nd}{round}}. And analogously for \code {each}. ! Undefined control sequence. l.30488 If \code {x} has length zero and \code{length.out} is supplied and is ! Undefined control sequence. l.30488 If \code{x} has length zero and \code {length.out} is supplied and is ! Undefined control sequence. l.30490 by an \code {NA} of the appropriate class for an atomic vector ! Undefined control sequence. l.30491 (\code {0} for raw vectors) and \code{NULL} for a list. ! Undefined control sequence. l.30491 (\code{0} for raw vectors) and \code {NULL} for a list. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30492 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30494 \begin{Value} ! Undefined control sequence. l.30495 An object of the same type as \code {x}. ! Undefined control sequence. l.30497 \code {rep.int} and \code{rep\_len} return no attributes (except the [296]] ! Undefined control sequence. l.30497 \code{rep.int} and \code {rep\_len} return no attributes (except the ! Undefined control sequence. l.30500 The default method of \code {rep} gives the result names (which will ! Undefined control sequence. l.30501 almost always contain duplicates) if \code {x} had names, but retains ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30503 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30505 \begin{Note} \relax ! Undefined control sequence. l.30506 Function \code {rep.int} is a simple case which was provided as a ! Undefined control sequence. l.30508 ... be dropped). The performance of \code {rep} ! Undefined control sequence. l.30509 has been improved since, but \code {rep.int} is still at least twice as ! Undefined control sequence. l.30510 fast when \code {x} has names. ! Undefined control sequence. l.30512 The name \code {rep.int} long precedes making \code{rep} generic. ! Undefined control sequence. l.30512 ...ode{rep.int} long precedes making \code {rep} generic. ! Undefined control sequence. l.30514 Function \code {rep} is a primitive, but (partial) matching of argument ! Undefined control sequence. l.30517 For historical reasons \code {rep} (only) works on \code{NULL}: the ! Undefined control sequence. l.30517 ...easons \code{rep} (only) works on \code {NULL}: the ! Undefined control sequence. l.30518 result is always \code {NULL} even when \code{length.out} is positive. ! Undefined control sequence. l.30518 ...t is always \code{NULL} even when \code {length.out} is positive. ! Undefined control sequence. l.30521 worked on \LinkA {expression}{expression} vectors. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30522 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30524 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30528 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30530 \begin{SeeAlso} \relax ! Undefined control sequence. l.30531 \code {\LinkA{seq}{seq}}, \code{\LinkA{sequence}{sequence}}, \code{\L... ! Undefined control sequence. l.30531 \code{\LinkA {seq}{seq}}, \code{\LinkA{sequence}{sequence}}, \code{\L... ! Undefined control sequence. l.30531 \code{\LinkA{seq}{seq}}, \code {\LinkA{sequence}{sequence}}, \code{\L... ! Undefined control sequence. l.30531 \code{\LinkA{seq}{seq}}, \code{\LinkA {sequence}{sequence}}, \code{\L... ! Undefined control sequence. l.30531 ...code{\LinkA{sequence}{sequence}}, \code {\LinkA{replicate}{replica... ! Undefined control sequence. l.30531 ...inkA{sequence}{sequence}}, \code{\LinkA {replicate}{replicate}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30532 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30534 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30535 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30537 rep(1:4, each = 2) # not the same. ! You can't use `macro parameter character #' in horizontal mode. l.30538 rep(1:4, c(2,2,2,2)) # same as second. ! You can't use `macro parameter character #' in horizontal mode. l.30540 rep(1:4, each = 2, len = 4) # first 4 only. ! You can't use `macro parameter character #' in horizontal mode. l.30541 rep(1:4, each = 2, len = 10) # 8 integers plus two recycled 1's. ! You can't use `macro parameter character #' in horizontal mode. l.30542 rep(1:4, each = 2, times = 3) # length 24, 3 complete replications ! You can't use `macro parameter character #' in horizontal mode. l.30544 rep(1, 40*(1-.8)) # length 7 on most platforms ! You can't use `macro parameter character #' in horizontal mode. l.30545 rep(1, 40*(1-.8)+1e-7) # better ! You can't use `macro parameter character #' in vertical mode. l.30547 # # replicate a list ! You can't use `macro parameter character #' in vertical mode. l.30547 ## replicate a list ! You can't use `macro parameter character #' in vertical mode. l.30551 # date-time objects ! You can't use `macro parameter character #' in vertical mode. l.30556 # # named factor ! You can't use `macro parameter character #' in vertical mode. l.30556 ## named factor ! You can't use `macro parameter character #' in horizontal mode. l.30561 rep.int(x, 2) # no names ! Missing $ inserted. $ l.30562 rep_ len(x, 10) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30563 \end{ExampleCode} ! Missing $ inserted. $ l.30563 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30564 \end{Examples} ! Undefined control sequence. l.30565 \HeaderA {replace}{Replace Values in a Vector}{replace} ! Undefined control sequence. l.30566 \keyword {manip}{replace} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30568 \begin{Description} \relax ! Undefined control sequence. l.30569 \code {replace} replaces the values in \code{x} ! Undefined control sequence. l.30569 ...e{replace} replaces the values in \code {x} ! Undefined control sequence. l.30570 with indices given in \code {list} by those given in \code{values}. ! Undefined control sequence. l.30570 ... in \code{list} by those given in \code {values}. ! Undefined control sequence. l.30571 If necessary, the values in \code {values} are recycled. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30572 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30574 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30578 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30580 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30581 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30582 \item[\code{x}] vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30583 \item[\code{list}] an index vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30584 \item[\code{values}] replacement values ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30585 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help [37. ... l.30586 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30588 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30590 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30592 \begin{Note} \relax ! Undefined control sequence. l.30593 \code {x} is unchanged: remember to assign the result. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30594 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30596 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30600 \end{References} ! Undefined control sequence. l.30601 \HeaderA {Reserved}{Reserved Words in R}{Reserved} ! Undefined control sequence. l.30602 \aliasA {...}{Reserved}{...} ! Undefined control sequence. l.30603 \aliasA {..1}{Reserved}{..1} ! Undefined control sequence. l.30604 \aliasA {reserved}{Reserved}{reserved} ! Undefined control sequence. l.30605 \keyword {programming}{Reserved} ! Undefined control sequence. l.30606 \keyword {documentation}{Reserved} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30608 \begin{Description} \relax ! Undefined control sequence. l.30609 The reserved words in \R {}'s parser are ! Undefined control sequence. l.30611 \code {\LinkA{if}{if}} \code{\LinkA{else}{else}} \code{\LinkA{repeat}... ! Undefined control sequence. l.30611 \code{\LinkA {if}{if}} \code{\LinkA{else}{else}} \code{\LinkA{repeat}... ! Undefined control sequence. l.30611 \code{\LinkA{if}{if}} \code {\LinkA{else}{else}} \code{\LinkA{repeat}... ! Undefined control sequence. l.30611 \code{\LinkA{if}{if}} \code{\LinkA {else}{else}} \code{\LinkA{repeat}... ! Undefined control sequence. l.30611 ...f}{if}} \code{\LinkA{else}{else}} \code {\LinkA{repeat}{repeat}} \... ! Undefined control sequence. l.30611 ... \code{\LinkA{else}{else}} \code{\LinkA {repeat}{repeat}} \code{\L... ! Undefined control sequence. l.30611 ...e}} \code{\LinkA{repeat}{repeat}} \code {\LinkA{while}{while}} ! Undefined control sequence. l.30611 ...de{\LinkA{repeat}{repeat}} \code{\LinkA {while}{while}} ! Undefined control sequence. l.30612 \code {\LinkA{function}{function}} \code{\LinkA{for}{for}} \code{in} ! Undefined control sequence. l.30612 \code{\LinkA {function}{function}} \code{\LinkA{for}{for}} \code{in} ! Undefined control sequence. l.30612 \code{\LinkA{function}{function}} \code {\LinkA{for}{for}} \code{in} ! Undefined control sequence. l.30612 ...LinkA{function}{function}} \code{\LinkA {for}{for}} \code{in} ! Undefined control sequence. l.30612 ...unction}} \code{\LinkA{for}{for}} \code {in} ! Undefined control sequence. l.30613 \code {\LinkA{next}{next}} \code{\LinkA{break}{break}} ! Undefined control sequence. l.30613 \code{\LinkA {next}{next}} \code{\LinkA{break}{break}} ! Undefined control sequence. l.30613 \code{\LinkA{next}{next}} \code {\LinkA{break}{break}} ! Undefined control sequence. l.30613 \code{\LinkA{next}{next}} \code{\LinkA {break}{break}} ! Undefined control sequence. l.30615 \code {\LinkA{TRUE}{TRUE}} \code{\LinkA{FALSE}{FALSE}} \code{\LinkA{N... ! Undefined control sequence. l.30615 \code{\LinkA {TRUE}{TRUE}} \code{\LinkA{FALSE}{FALSE}} \code{\LinkA{N... ! Undefined control sequence. l.30615 \code{\LinkA{TRUE}{TRUE}} \code {\LinkA{FALSE}{FALSE}} \code{\LinkA{N... ! Undefined control sequence. l.30615 \code{\LinkA{TRUE}{TRUE}} \code{\LinkA {FALSE}{FALSE}} \code{\LinkA{N... ! Undefined control sequence. l.30615 ...RUE}} \code{\LinkA{FALSE}{FALSE}} \code {\LinkA{NULL}{NULL}} ! Undefined control sequence. l.30615 ...code{\LinkA{FALSE}{FALSE}} \code{\LinkA {NULL}{NULL}} ! Undefined control sequence. l.30616 \code {\LinkA{Inf}{Inf}} \code{\LinkA{NaN}{NaN}} ! Undefined control sequence. l.30616 \code{\LinkA {Inf}{Inf}} \code{\LinkA{NaN}{NaN}} ! Undefined control sequence. l.30616 \code{\LinkA{Inf}{Inf}} \code {\LinkA{NaN}{NaN}} ! Undefined control sequence. l.30616 \code{\LinkA{Inf}{Inf}} \code{\LinkA {NaN}{NaN}} ! Undefined control sequence. l.30617 \code {\LinkA{NA}{NA}} \code{\LinkA{NA\_integer\_}{NA.Rul.integer.Rul... ! Undefined control sequence. l.30617 \code{\LinkA {NA}{NA}} \code{\LinkA{NA\_integer\_}{NA.Rul.integer.Rul... ! Undefined control sequence. l.30617 \code{\LinkA{NA}{NA}} \code {\LinkA{NA\_integer\_}{NA.Rul.integer.Rul... ! Undefined control sequence. l.30617 \code{\LinkA{NA}{NA}} \code{\LinkA {NA\_integer\_}{NA.Rul.integer.Rul... ! Undefined control sequence. l.30617 ..._integer\_}{NA.Rul.integer.Rul.}} \code {\LinkA{NA\_real\_}{NA.Rul... ! Undefined control sequence. l.30617 ...r\_}{NA.Rul.integer.Rul.}} \code{\LinkA {NA\_real\_}{NA.Rul.real.R... ! Undefined control sequence. l.30618 \code {\LinkA{NA\_complex\_}{NA.Rul.complex.Rul.}} \code{\LinkA{NA\_c... ! Undefined control sequence. l.30618 \code{\LinkA {NA\_complex\_}{NA.Rul.complex.Rul.}} \code{\LinkA{NA\_c... ! Undefined control sequence. l.30618 ..._complex\_}{NA.Rul.complex.Rul.}} \code {\LinkA{NA\_character\_}{N... ! Undefined control sequence. l.30618 ...x\_}{NA.Rul.complex.Rul.}} \code{\LinkA {NA\_character\_}{NA.Rul.c... Underfull \hbox (badness 10000) in paragraph at lines 30615--30619 []\OT1/cmr/m/n/10 TRUETRUE FALSE-FALSE NULL-NULL In-fInf NaN-NaN Underfull \hbox (badness 10000) in paragraph at lines 30615--30619 \OT1/cmr/m/n/10 NANA NA[]integer[]NA.Rul.integer.Rul. NA[]real[]NA.Rul.real.Rul . ! Undefined control sequence. l.30620 \code {...} and \code{..1}, \code{..2} etc, which are used to refer to ! Undefined control sequence. l.30620 \code{...} and \code {..1}, \code{..2} etc, which are used to refer to ! Undefined control sequence. l.30620 \code{...} and \code{..1}, \code {..2} etc, which are used to refer to ! Undefined control sequence. l.30624 and \LinkA {dotsMethods}{dotsMethods} for their use in formal methods. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30625 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30627 \begin{Details} \relax ! Undefined control sequence. l.30628 Reserved words outside \LinkA {quotes}{Quotes} are always parsed to be ! Undefined control sequence. l.30631 \code {\LinkA{make.names}{make.names}}). They \bold{are} allowed as ... ! Undefined control sequence. l.30631 \code{\LinkA {make.names}{make.names}}). They \bold{are} allowed as ... ! Undefined control sequence. l.30631 ...{make.names}{make.names}}). They \bold {are} allowed as non-synta... ! Undefined control sequence. l.30632 names, e.g.~inside \LinkA {backtick}{backtick} quotes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30633 \end{Details} ! Undefined control sequence. l.30634 \HeaderA {rev}{Reverse Elements}{rev} ! Undefined control sequence. l.30635 \methaliasA {rev.default}{rev}{rev.default} ! Undefined control sequence. l.30636 \keyword {manip}{rev} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30638 \begin{Description} \relax ! Undefined control sequence. l.30639 \code {rev} provides a reversed version of its argument. It is generic ! Undefined control sequence. l.30641 \code {\LinkA{dendrogram}{dendrogram}}s. ! Undefined control sequence. l.30641 \code{\LinkA {dendrogram}{dendrogram}}s. [297]] ! Undefined control sequence. l.30645 directly achievable by \code {\LinkA{sort}{sort}(x, decreasing = TRUE)}. ! Undefined control sequence. l.30645 directly achievable by \code{\LinkA {sort}{sort}(x, decreasing = TRUE)}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30646 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30648 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30652 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30654 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30655 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30656 \item[\code{x}] a vector or another object for which reversal is def... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30657 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30658 \end{Arguments} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30660 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30664 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30666 \begin{SeeAlso} \relax ! Undefined control sequence. l.30667 \code {\LinkA{seq}{seq}}, \code{\LinkA{sort}{sort}}. ! Undefined control sequence. l.30667 \code{\LinkA {seq}{seq}}, \code{\LinkA{sort}{sort}}. ! Undefined control sequence. l.30667 \code{\LinkA{seq}{seq}}, \code {\LinkA{sort}{sort}}. ! Undefined control sequence. l.30667 \code{\Li Underfull \hbox (badness 4556) in paragraph at lines 3369--3377 @textrm Others you may see are @texttt \VignettePackage[] @textrm (cur-rently i g-nored), @texttt \VignetteDepends[] [38nkA{seq}{seq}}, \code{\LinkA {sort}{sort}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30668 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30670 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30671 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30673 # # sort into descending order; first more efficiently: ! You can't use `macro parameter character #' in horizontal mode. l.30673 ## sort into descending order; first more efficiently: ! You can't use `macro parameter character #' in horizontal mode. l.30675 stopifnot(rev(1:7) == 7:1) # - don't need 'rev' here ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30676 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30677 \end{Examples} ! Undefined control sequence. l.30678 \HeaderA {Rhome}{Return the R Home Directory}{Rhome} ! Undefined control sequence. l.30679 \aliasA {R.home}{Rhome}{R.home} ! Undefined control sequence. l.30680 \aliasA {R\_HOME}{Rhome}{R.Rul.HOME} ! Undefined control sequence. l.30681 \keyword {utilities}{Rhome} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30683 \begin{Description} \relax ! Undefined control sequence. l.30684 Return the \R {} home directory, or the full path to a component of the ! Undefined control sequence. l.30685 \R {} installation. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30686 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30688 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30692 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30694 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30695 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30696 \item[\code{component}] As well as \code{"home"} which gives the \R{... ! Undefined control sequence. l.30696 \item[\code{component}] As well as \code {"home"} which gives the \R{... ! Undefined control sequence. l.30696 ...ell as \code{"home"} which gives the \R {} home ! Undefined control sequence. l.30697 directory, other known values are \code {"bin"}, \code{"doc"}, ! Undefined control sequence. l.30697 ...er known values are \code{"bin"}, \code {"doc"}, ! Undefined control sequence. l.30698 \code {"etc"}, \code{"include"}, \code{"modules"} and \code{"share"} ! Undefined control sequence. l.30698 \code{"etc"}, \code {"include"}, \code{"modules"} and \code{"share"} ! Undefined control sequence. l.30698 \code{"etc"}, \code{"include"}, \code {"modules"} and \code{"share"} ! Undefined control sequence. l.30698 ...{"include"}, \code{"modules"} and \code {"share"} ! Undefined control sequence. l.30699 ...ths to the corresponding parts of an \R {} installation. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30700 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30701 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30703 \begin{Details} \relax ! Undefined control sequence. l.30704 The \R {} home directory is the top-level directory of the \R{} ! Undefined control sequence. l.30704 ...ry is the top-level directory of the \R {} ! Undefined control sequence. l.30707 The \R {} home directory is often referred to as \var{R\_HOME}, ! Undefined control sequence. l.30707 ... directory is often referred to as \var {R\_HOME}, ! Undefined control sequence. l.30708 ...ironment variable of that name in an \R {} ! Undefined control sequence. l.30710 It can be found outside an \R {} session by \code{R \LinkA{RHOME}{RHO... ! Undefined control sequence. l.30710 ... found outside an \R{} session by \code {R \LinkA{RHOME}{RHOME}}. ! Undefined control sequence. l.30710 ...tside an \R{} session by \code{R \LinkA {RHOME}{RHOME}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for] explanation. Type H for immediate help. ... l.30711 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30713 \begin{Value} ! Undefined control sequence. l.30714 A character string giving the \R {} home directory or path to a ! Undefined control sequence. l.30716 of the \R {} home directory, but this need not be the case in a Unix-... ! Undefined control sequence. l.30719 The value for \code {"modules"} and on Windows \code{"bin"} is a ! Undefined control sequence. l.30719 ...r \code{"modules"} and on Windows \code {"bin"} is a ! Undefined control sequence. l.30723 values of the environment variables \env {R\_HOME} and where set ! Undefined control sequence. l.30724 \env {R\_SHARE\_DIR}, \env{R\_DOC\_DIR} and \env{R\_INCLUDE\_DIR} (th... ! Undefined control sequence. l.30724 \env{R\_SHARE\_DIR}, \env {R\_DOC\_DIR} and \env{R\_INCLUDE\_DIR} (th... ! Undefined control sequence. l.30724 ...SHARE\_DIR}, \env{R\_DOC\_DIR} and \env {R\_INCLUDE\_DIR} (these are ! Undefined control sequence. l.30727 On Windows the values of \code {R.home()} and \env{R\_HOME} are ! Undefined control sequence. l.30727 ... the values of \code{R.home()} and \env {R\_HOME} are ! Undefined control sequence. l.30730 \env {R\_HOME} is set to use forward slashes (since many package ! Undefined control sequence. l.30732 \file {Makefile}s). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30733 \end{Value} ! Undefined control sequence. l.30734 \HeaderA {rle}{Run Length Encoding}{rle} ! Undefined control sequence. l.30735 \aliasA {inverse.rle}{rle}{inverse.rle} ! Undefined control sequence. l.30736 \aliasA {print.rle}{rle}{print.rle} ! Undefined control sequence. l.30737 \keyword {manip}{rle} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30739 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30742 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30744 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30752 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30754 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30755 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30756 \item[\code{x}] a vector (atomic, not a list) for \code{rle()}; ! Undefined control sequence. l.30756 ...a vector (atomic, not a list) for \code {rle()}; ! Undefined control sequence. l.30757 an object of class \code {"rle"} for \code{inverse.rle()}. ! Undefined control sequence. l.30757 an object of class \code{"rle"} for \code {inverse.rle()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30758 \item[\code{...}] further arguments; ignored here. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30759 \item[\code{digits}] number of significant digits for printing, see ! Undefined control sequence. l.30760 \code {\LinkA{print.default}{print.default}}. ! Undefined control sequence. l.30760 \code{\LinkA {print.default}{print.default}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30761 \item[\code{prefix}] character string, prepended to each printed line. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30762 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30763 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30765 \begin{Details} \relax ! Undefined control sequence. l.30766 `vector' is used in the sense of \code {\LinkA{is.vector}{is.vector}}. ! Undefined control sequence. l.30766 ...r' is used in the sense of \code{\LinkA {is.vector}{is.vector}}. [298 [39] ! Undefined control sequence. l.30771 \code {inverse.rle()} is the inverse function of \code{rle()}, ! Undefined control sequence. l.30771 ...rle()} is the inverse function of \code {rle()}, ! Undefined control sequence. l.30772 reconstructing \code {x} from the runs. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30773 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30775 \begin{Value} ! Undefined control sequence. l.30776 \code {rle()} returns an object of class \code{"rle"} which is a list ! Undefined control sequence. l.30776 ...rle()} returns an object of class \code {"rle"} which is a list ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30778 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30779 \item[\code{lengths}] an integer vector containing the length of eac... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30780 \item[\code{values}] a vector of the same length as \code{lengths} w... ! Undefined control sequence. l.30780 ...}] a vector of the same length as \code {lengths} with the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30783 \end{ldescription} ! Undefined control sequence. l.30784 \code {inverse.rle()} returns an atomic vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30785 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30787 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30788 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30791 # # lengths [1:5] 5 4 3 2 1 ! You can't use `macro parameter character #' in horizontal mode. l.30791 ## lengths [1:5] 5 4 3 2 1 ! You can't use `macro parameter character #' in horizontal mode. l.30792 # # values [1:5] 10 9 8 7 6 ! You can't use `macro] parameter character #' in horizontal mode. l.30792 ## values [1:5] 10 9 8 7 6 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30803 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30804 \end{Examples} ! Undefined control sequence. l.30805 \HeaderA {Round}{Rounding of Numbers}{Round} ! Undefined control sequence. l.30806 \aliasA {ceiling}{Round}{ceiling} ! Undefined control sequence. l.30807 \aliasA {floor}{Round}{floor} ! Undefined control sequence. l.30808 \aliasA {round}{Round}{round} ! Undefined control sequence. l.30809 \aliasA {signif}{Round}{signif} ! Undefined control sequence. l.30810 \aliasA {trunc}{Round}{trunc} ! Undefined control sequence. l.30811 \keyword {arith}{Round} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30813 \begin{Description} \relax ! Undefined control sequence. l.30814 \code {ceiling} takes a single numeric argument \code{x} and returns a ! Undefined control sequence. l.30814 ...} takes a single numeric argument \code {x} and returns a ! Undefined control sequence. l.30816 corresponding elements of \code {x}. Underfull \hbox (badness 5475) in paragraph at lines 30799--30817 []\OT1/cmr/m/n/10 N <- in-te-ger(0) stopifnot(x == in-verse.rle(rle(x)), iden-t i-cal(N, in- ! Undefined control sequence. l.30818 \code {floor} takes a single numeric argument \code{x} and returns a ! Undefined control sequence. l.30818 ...} takes a single numeric argument \code {x} and returns a ! Undefined control sequence. l.30820 corresponding elements of \code {x}. ! Undefined control sequence. l.30822 \code {trunc} takes a single numeric argument \code{x} and returns a ! Undefined control sequence. l.30822 ...} takes a single numeric argument \code {x} and returns a ! Undefined control sequence. l.30824 \code {x} toward \code{0}. ! Undefined control sequence. l.30824 \code{x} toward \code {0}. ! Undefined control sequence. l.30826 \code {round} rounds the values in its first argument to the specified ! Undefined control sequence. l.30829 \code {signif} rounds the values in its first argument to the specified ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30831 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30833 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30842 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30844 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30845 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30846 \item[\code{x}] a numeric vector. Or, for \code{round} and \code{si... ! Undefined control sequence. l.30846 ...de{x}] a numeric vector. Or, for \code {round} and \code{signif}, a ! Undefined control sequence. l.30846 ...vector. Or, for \code{round} and \code {signif}, a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30849 \item[\code{digits}] integer indicating the number of decimal places ! Undefined control sequence. l.30850 (\code {round}) or significant digits (\code{signif}) to be used. ! Undefined control sequence. l.30850 ...de{round}) or significant digits (\code {signif}) to be used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30853 \item[\code{...}] arguments to be passed to methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30854 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30855 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30857 \begin{Details} \relax ! Undefined control sequence. l.30859 individually or via the \code {\LinkA{Math}{S3groupGeneric}} group ! Undefined control sequence. l.30859 individually or via the \code{\LinkA {Math}{S3groupGeneric}} group ! Undefined control sequence. l.30864 Therefore \code {round(0.5)} is \code{0} and \code{round(-1.5)} is ! Undefined control sequence. l.30864 Therefore \code{round(0.5)} is \code {0} and \code{round(-1.5)} is ! Undefined control sequence. l.30864 ...\code{round(0.5)} is \code{0} and \code {round(-1.5)} is ! Undefined control sequence. l.30865 \code {-2}. However, this is dependent on OS services and on ! Undefined control sequence. l.30866 representation error (since e.g.~\code {0.15} is not represented ! Undefined control sequence. l.30868 to the printed number, and so \code {round(0.15, 1)} could be either ! Undefined control sequence. l.30869 \code {0.1} or \code{0.2}). ! Undefined control sequence. l.30869 \code{0.1} or \code {0.2}). ! Undefined control sequence. l.30872 ten, so for example \code {round(x, digits = -2)} rounds to the nearest ! Undefined control sequence. l.30875 For \code {signif} the recognized values of \code{digits} are ! Undefined control sequence. l.30875 ...{signif} the recognized values of \code {digits} are ! Undefined control sequence. l.30876 \code {1...22}, and non-missing values are rounded to the nearest [299] ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30882 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30884 \begin{Section} {S4 methods} ! Undefined control sequence. l.30887 \code {ceiling}, \code{floor} and \code{trunc} are members of the ! Undefined control sequence. l.30887 \code{ceiling}, \code {floor} and \code{trunc} are members of the ! Undefined control sequence. l.30887 \code{ceiling}, \code{floor} and \code {trunc} are members of the ! Undefined control sequence. l.30888 \code {\LinkA{Math}{S4groupGeneric}} group generic. As an S4 ! Undefined control sequence. l.30888 \code{\LinkA {Math}{S4groupGeneric}} group generic. As an S4 ! Undefined control sequence. l.30889 generic, \code {trunc} has only one argument. ! Undefined control sequence. l.30891 \code {round} and \code{signif} are members of the ! Undefined control sequence. l.30891 \code{round} and \code {signif} are members of the ! Undefined control sequence. l.30892 \code {\LinkA{Math2}{S4groupGeneric}} group generic. ! Undefined control sequence. l.30892 \code{\LinkA {Math2}{S4groupGeneric}} group generic. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30893 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30895 \begin{Section} {Warning} ! Undefined control sequence. l.30897 especially with \code {floor} and \code{ceiling}. For example, we ! Undefined control sequence. l.30897 especially with \code{floor} and \code {ceiling}. For example, we ! Undefined control sequence. l.30898 `know' that \code {floor(log(x, base = 8))} for \code{x = 8} is ! Undefined control sequence. l.30898 ...code{floor(log(x, base = 8))} for \code {x = 8} is ! Undefined control sequence. l.30899 \code {1}, but \code{0} has been seen on an \R{} platform. It is ! Undefined control sequence. l.30899 \code{1}, but \code {0} has been seen on an \R{} platform. It is ! Undefined control sequence. l.30899 ...1}, but \code{0} has been seen on an \R {} platform. It is ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30901 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30903 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. [40 ... l.30906 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30908 \begin{SeeAlso} \relax ! Undefined control sequence. l.30909 \code {\LinkA{as.integer}{as.integer}}. ! Undefined control sequence. l.30909 \code{\LinkA {as.integer}{as.integer}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30910 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30912 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30913 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.30914 round(.5 + -2:4) # IEEE rounding: -2 0 0 2 2 4 4 ! You can't use `macro parameter character #' in horizontal mode. l.30916 round(x1) # -- IEEE rounding ! ! Missing $ inserted. $ l.30921 x2 <- pi * 100^ (-1:3) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30924 \end{ExampleCode} ! Missing $ inserted. $ l.30924 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30925 \end{Examples} ! Undefined control sequence. l.30926 \HeaderA {round.POSIXt}{Round / Truncate Data-Time Objects}{round.POS... ! Undefined control sequence. l.30927 \aliasA {round.Date}{round.POSIXt}{round.Date} ! Undefined control sequence. l.30928 \aliasA {trunc.Date}{round.POSIXt}{trunc.Date} ! Undefined control sequence. l.30929 \aliasA {trunc.POSIXt}{round.POSIXt}{trunc.POSIXt} ! Undefined control sequence. l.30930 \keyword {chron}{round.POSIXt} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30932 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30934 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30936 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 30921--30937 []\OT1/cmr/m/n/10 x2 <- pi * 100$[] \OMS/cmsy/m/n/10 ^^@ \OT1/cmr/m/n/10 1 : 3) \OML/cmm/m/it/10 round\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 2\OML/ cmm/m/it/10 ; \OT1/cmr/m/n/10 3)\OML/cmm/m/it/10 signif\OT1/cmr/m/n/10 (\OML/cm m/m/it/10 x\OT1/cmr/m/n/10 2\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 3)$ Underfull \hbox (badness 10000) in paragraph at lines 30921--30937 \OT1/cmr/m/n/10 round.POSIXtRound / Trun-cate Data-Time Ob-ject-sround.POSIXt Underfull \hbox (badness 10000) in paragraph at lines 30921--30937 \OT1/cmr/m/n/10 round.Dateround.POSIXtround.Date trunc.Dateround.POSIXttrunc.Da te Underfull \hbox (badness 10000) in paragraph at lines 30921--30937 \OT1/cmr/m/n/10 trunc.POSIXtround.POSIXttrunc.POSIXt chron-round.POSIXt Round o r ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30948 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30950 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30951 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30952 \item[\code{x}] an object inheriting from \code{"POSIXt"} or \code{"... ! Undefined control sequence. l.30952 ...ode{x}] an object inheriting from \code {"POSIXt"} or \code{"Date"}. ! Undefined control sequence. l.30952 ...nheriting from \code{"POSIXt"} or \code {"Date"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30953 \item[\code{units}] one of the units listed. Can be abbreviated. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30954 \item[\code{...}] arguments to be passed to or from other methods, n... ! Undefined control sequence. l.30955 \code {digits} for \code{round}. ! Undefined control sequence. l.30955 \code{digits} for \code {round}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30956 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30957 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30959 \begin{Details} \relax ! Undefined control sequence. l.30962 \LinkA {time zone}{time zone} is used. ! Undefined control sequence. l.30964 The methods for class \code {"Date"} are of little use except to remove ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30966 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30968 \begin{Value} ! Undefined control sequence. l.30969 An object of class \code {"POSIXlt"} or \code{"Date"}. ! Undefined control sequence. l.30969 ...ject of class \code{"POSIXlt"} or \code {"Date"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30970 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30972 \begin{SeeAlso} \relax ! Undefined control sequence. l.30973 \code {\LinkA{round}{round}} for the generic function and default met... ! Undefined control sequence. l.30973 \code{\LinkA {round}{round}} for the generic function and default met... ! Undefined control sequence. l.30975 \code {\LinkA{DateTimeClasses}{DateTimeClasses}}, \code{\LinkA{Date}{... ! Undefined control sequence. l.30975 \code{\LinkA {DateTimeClasses}{DateTimeClasses}}, \code{\LinkA{Date}{... ! Undefined control sequence. l.30975 ...teTimeClasses}{DateTimeClasses}}, \code {\LinkA{Date}{Date}} ! Undefined control sequence. l.30975 ...lasses}{DateTimeClasses}}, \code{\LinkA {Date}{Date}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30976 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30978 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30979 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30982 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30983 \end{Exam]ples} ! Undefined control sequence. l.30984 \HeaderA {row}{Row Indexes}{row} ! Undefined control sequence. l.30985 \keyword {array}{row} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30987 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30990 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30992 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30996 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30998 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.30999 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31000 \item[\code{x}] a matrix-like object, that is one with a two-dimensi... ! Undefined control sequence. l.31001 \code {dim}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31002 \item[\code{as.factor}] a logical value indicating whether the value... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31005 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31006 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31008 \begin{Value} ! Undefined control sequence. l.31009 ...atrix with the same dimensions as \code {x} and whose ! Undefined control sequence. l.31010 \code {ij}-th element is equal to \code{i} (or the \code{i}-th row la... ! Undefined control sequence. l.31010 \code{ij}-th element is equal to \code {i} (or the \code{i}-th row la... ! Undefined control sequence. l.31010 ...ment is equal to \code{i} (or the \code {i}-th row label). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31011 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31013 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31017 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31019 \begin{SeeAlso} \relax ! Undefined control sequence. l.31020 \code {\LinkA{col}{col}} to get columns. ! Undefined control sequence. l.31020 \code{\LinkA {col}{col}} to get columns. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31021 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31023 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31024 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.31026 # extract the diagonal of a matrix [300] [41 ! You can't use `macro parameter character #' in vertical mode. l.31030 # create an identity 5-by-5 matrix ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31034 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31035 \end{Examples} ! Undefined control sequence. l.31036 \HeaderA {row+colnames}{Row and Column Names}{row+colnames} ! Undefined control sequence. l.31037 \aliasA {colnames}{row+colnames}{colnames} ! Undefined control sequence. l.31038 \aliasA {colnames<\Rdash{}}{row+colnames}{colnames<.Rdash.} ! Undefined control sequence. l.31038 \aliasA{colnames<\Rdash {}}{row+colnames}{colnames<.Rdash.} ! Undefined control sequence. l.31039 \aliasA {rownames}{row+colnames}{rownames} ! Undefined control sequence. l.31040 \aliasA {rownames<\Rdash{}}{row+colnames}{rownames<.Rdash.} ! Undefined control sequence. l.31040 \aliasA{rownames<\Rdash {}}{row+colnames}{rownames<.Rdash.} ! Undefined control sequence. l.31041 \keyword {array}{row+colnames} ! Undefined control sequence. l.31042 \keyword {manip}{row+colnames} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31044 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31046 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31048 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31056 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31058 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31059 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31060 \item[\code{x}] a matrix-like \R{} object, with at least two dimensi... ! Undefined control sequence. l.31060 \item[\code{x}] a matrix-like \R {} object, with at least two dimensi... ! Undefined control sequence. l.31061 \code {colnames}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31062 \item[\code{do.NULL}] logical. If \code{FALSE} and names are \code{N... ! Undefined control sequence. l.31062 \item[\code{do.NULL}] logical. If \code {FALSE} and names are \code{N... ! Undefined control sequence. l.31062 ...al. If \code{FALSE} and names are \code {NULL}, names are created. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31063 \item[\code{prefix}] for created names. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31064 \item[\code{value}] a valid value for that component of ! Undefined control sequence. l.31065 \code {\LinkA{dimnames}{dimnames}(x)}. For a matrix or array this is... ! Undefined control sequence. l.31065 \code{\LinkA {dimnames}{dimnames}(x)}. For a matrix or array this is... ! Undefined control sequence. l.31066 \code {NULL} or a character vector of non-zero length equal to the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31068 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31069 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31071 \begin{Details} \relax ! Undefined control sequence. l.31073 matrix-like object \code {x}. If the object has \code{\LinkA{dimname... ! Undefined control sequence. l.31073 ...ject \code{x}. If the object has \code {\LinkA{dimnames}{dimnames}} ! Undefined control sequence. l.31073 ...ode{x}. If the object has \code{\LinkA {dimnames}{dimnames}} ! Undefined control sequence. l.31075 ... column names. For a data frame, \code {rownames} ! Undefined control sequence. l.31076 and \code {colnames} eventually call \code{\LinkA{row.names}{row.name... ! Undefined control sequence. l.31076 and \code{colnames} eventually call \code {\LinkA{row.names}{row.name... ! Undefined control sequence. l.31076 ...{colnames} eventually call \code{\LinkA {row.names}{row.names}} and ! Undefined control sequence. l.31077 \code {\LinkA{names}{names}} respectively, but the latter are preferred. ! Undefined control sequence. l.31077 \code{\LinkA {names}{names}} respectively, but the latter are preferred. ! Undefined control sequence. l.31079 If \code {do.NULL} is \code{FALSE}, a character vector (of le]ngth ! Undefined control sequence. l.31079 If \code{do.NULL} is \code {FALSE}, a character vector (of length ! Undefined control sequence. l.31080 \code {\LinkA{NROW}{NROW}(x)} or \code{\LinkA{NCOL}{NCOL}(x)}) is ret... ! Undefined control sequence. l.31080 \code{\LinkA {NROW}{NROW}(x)} or \code{\LinkA{NCOL}{NCOL}(x)}) is ret... ! Undefined control sequence. l.31080 \code{\LinkA{NROW}{NROW}(x)} or \code {\LinkA{NCOL}{NCOL}(x)}) is ret... ! Undefined control sequence. l.31080 ...{\LinkA{NROW}{NROW}(x)} or \code{\LinkA {NCOL}{NCOL}(x)}) is retur... ! Undefined control sequence. l.31081 case, prepending \code {prefix} to simple numbers, if there are no ! Undefined control sequence. l.31082 ...ding component of the dimnames is \code {NULL}. ! Undefined control sequence. l.31085 values of \code {value} to character, but do not dispatch methods for ! Undefined control sequence. l.31086 \code {as.character}. ! Undefined control sequence. l.31088 For a data frame, \code {value} for \code{rownames} should be a ! Undefined control sequence. l.31088 For a data frame, \code{value} for \code {rownames} should be a ! Undefined control sequence. l.31090 enforced), and for \code {colnames} a character vector of (preferably) ! Undefined control sequence. l.31091 ...ally-valid names. In both cases, \code {value} will be ! Undefined control sequence. l.31092 coerced by \code {\LinkA{as.character}{as.character}}, and setting \c... ! Undefined control sequence. l.31092 coerced by \code{\LinkA {as.character}{as.character}}, and setting \c... ! Undefined control sequence. l.31092 ...cter}{as.character}}, and setting \code {colnames} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31094 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31096 \begin{Note} \relax ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31100 \begin{alltt} rownames(x)[3] <- "c"\end{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31100 ...tt} rownames(x)[3] <- "c"\end{alltt} ! Undefined control sequence. l.31102 may not work unless \code {x} already has dimnames, since this will ! Undefined control sequence. l.31103 create a length-3 \code {value} from the \code{NULL} value of ! Undefined control sequence. l.31103 ... a length-3 \code{value} from the \code {NULL} value of ! Undefined control sequence. l.31104 \code {rownames(x)}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31105 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31107 \begin{SeeAlso} \relax ! Undefined control sequence. l.31108 \code {\LinkA{dimnames}{dimnames}}, ! Undefined control sequence. l.31108 \code{\LinkA {dimnames}{dimnames}}, ! Undefined control sequence. l.31109 \code {\LinkA{case.names}{case.names}}, ! Undefined control sequence. l.31109 \code{\LinkA {case.names}{case.names}}, ! Undefined control sequence. l.31110 \code {\LinkA{variable.names}{variable.names}}. ! Undefined control sequence. l.31110 \code{\LinkA {variable.names}{variable.names}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31111 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31113 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31114 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31123 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31124 \end{Examples} ! Undefined control sequence. l.31125 \HeaderA {row.names}{Get and Set Row Names for Data Frames}{row.names} ! Undefined control sequence. l.31126 \methaliasA {row.names.data.frame}{row.names}{row.names.data.frame} ! Undefined control sequence. l.31127 \methaliasA {row.names.default}{row.names}{row.names.default} ! Undefined control sequence. l.31128 \aliasA {row.names<\Rdash{}}{row.names}{row.names<.Rdash.} ! Undefined control sequence. l.31128 \aliasA{row.names<\Rdash {}}{row.names}{row.names<.Rdash.} ! Undefined control sequence. l.31129 \methaliasA {row.names<\Rdash{}.data.frame}{row.names}{row.names<.Rda... ! Undefined control sequence. l.31129 \methaliasA{row.names<\Rdash {}.data.frame}{row.names}{row.names<.Rda... ! Undefined control sequence. l.31130 \methaliasA {row.names<\Rdash{}.default}{row.names}{row.names<.Rdash.... ! Undefined control sequence. l.31130 \methaliasA{row.names<\Rdash {}.default}{row.names}{row.names<.Rdash.... ! Undefined control sequence. l.31131 \keyword {classes}{row.names} ! Undefined control sequence. l.31132 \keyword {methods}{row.names} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31134 \begin{Description} \relax Underfull \hbox (badness 7667) in paragraph at lines 31118--31137 \OT1/cmr/m/n/10 <- c("x","Y") row-names(m2) <- row-names(m2, do.NULL = FALSE, Underfull \hbox (badness 1661) in paragraph at lines 31118--31137 \OT1/cmr/m/n/10 pre-fix = "Obs.") m2 row.namesGet and Set Row Names for Data Underfull \hbox (badness 10000) in paragraph at lines 31118--31137 \OT1/cmr/m/n/10 Frames-row.names row.names.data.framerow.namesrow.names.data.fr ame Overfull \hbox (37.36186pt too wide) in paragraph at lines 31118--31137 \OT1/cmr/m/n/10 row.names.defaultrow.namesrow.names.default row.names for immediate help. ... l.31141 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31143 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31148 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31150 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31151 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31152 \item[\code{x}] object of class \code{"data.frame"}, or any other cl... ! Undefined control sequence. l.31152 \item[\code{x}] object of class \code {"data.frame"}, or any other cl... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31154 \item[\code{value}] an object to be coerced to character unless an i... ! Undefined control sequence. l.31156 number of rows of \code {x} with no duplicated nor missing values. ! Undefined control sequence. l.31157 \code {NULL} is also allowed: see `Details'. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31158 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31159 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31161 \begin{Details} \relax ! Undefined control sequence. l.31169 for backwards compatibility (with \R {} <= 2.4.0) \code{row.names} will ! Undefined control sequence. l.31169 ...ompatibility (with \R{} <= 2.4.0) \code {row.names} will ! Undefined control sequence. l.31170 ... return a character vector. (Use \code {attr(x, "row.names")} if ! Undefined control sequence. l.31173 Using \code {NULL} for the value resets the row names to ! Undefined control sequence. l.31174 \code {seq\_len(nrow(x))}, regarded as `automatic'. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31175 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31177 \begin{Value} ! Undefined control sequence. l.31178 \code {row.names} returns a character vector. ! Undefined control sequence. l.31180 \code {row.names<-} returns a data frame with the row names changed. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31181 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31183 \begin{Note} \relax ! Undefined control sequence. l.31184 \code {row.names} is similar to \code{\LinkA{rownames}{rownames}} for... ! Undefined control sequence. l.31184 \code{row.names} is similar to \code {\LinkA{rownames}{rownames}} for... ! Undefined control sequence. l.31184 ...e{row.names} is similar to \code{\LinkA {rownames}{rownames}} for ... ! Undefined control sequence. l.31185 it has a method that calls \code {rownames} for an array argument. ! Undefined control sequence. l.31187 Row names of the form \code {1:n} for \code{n > 2} are stored ! Undefined control sequence. l.31187 Row names of the form \code{1:n} for \code {n > 2} are stored ! Undefined control sequence. l.31189 deparsing but never via \code {row.names} or ! Undefined control sequence. l.31190 \code {\LinkA{attr}{attr}(x, "row.names")}. Additionally, some names... ! Undefined control sequence. l.31190 \code{\LinkA {attr}{attr}(x, "row.names")}. Additionally, some names... ! Undefined control sequence. l.31192 \code {\LinkA{as.matrix}{as.matrix}} and \code{\LinkA{data.matrix}{da... ! Undefined control sequence. l.31192 \code{\LinkA {as.matrix}{as.matrix}} and \code{\LinkA{data.matrix}{da... ! Undefined control sequence. l.31192 ...\LinkA{as.matrix}{as.matrix}} and \code {\LinkA{data.matrix}{data.... ! Undefined control sequence. l.31192 ...as.matrix}{as.matrix}} and \code{\LinkA {data.matrix}{data.matrix}... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31195 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31197 \begin{References} \relax ! LaTeX Error: \be]gin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31202 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31204 \begin{SeeAlso} \relax ! Undefined control sequence. l.31205 \code {\LinkA{data.frame}{data.frame}}, \code{\LinkA{rownames}{rownam... ! Undefined control sequence. l.31205 \code{\LinkA {data.frame}{data.frame}}, \code{\LinkA{rownames}{rownam... ! Undefined control sequence. l.31205 ...{\LinkA{data.frame}{data.frame}}, \code {\LinkA{rownames}{rownames... ! Undefined control sequence. l.31205 ...{data.frame}{data.frame}}, \code{\LinkA {rownames}{rownames}}, \co... ! Undefined control sequence. l.31205 ...code{\LinkA{rownames}{rownames}}, \code {\LinkA{names}{names}}. ! Undefined control sequence. l.31205 ...inkA{rownames}{rownames}}, \code{\LinkA {names}{names}}. ! Undefined control sequence. l.31207 \code {.row\_names\_info} for the internal representations. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31208 \end{SeeAlso} ! Undefined control sequence. l.31209 \HeaderA {rowsum}{Give Column Sums of a Matrix or Data Frame, Based o... ! Undefined control sequence. l.31210 \methaliasA {rowsum.data.frame}{rowsum}{rowsum.data.frame} ! Undefined control sequence. l.31211 \methaliasA {rowsum.default}{rowsum}{rowsum.default} ! Undefined control sequence. l.31212 \keyword {manip}{rowsum} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31214 \begin{Description} \relax ! Undefined control sequence. l.31216 each level of a grouping variable. \code {rowsum} is generic, with a ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31218 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31220 \begin{Usage} Underfull \hbox (badness 3838) in paragraph at lines 31207--31221 []\OT1/cmr/m/n/10 .row[]names[]info for the in-ter-nal rep-re-sen-ta-tions. ro w-sum-Give Underfull \hbox (badness 6141) in paragraph at lines 31207--31221 \OT1/cmr/m/n/10 Col-umn Sums of a Ma-trix or Data Frame, Based on a Group- Underfull \hbox (badness 10000) in paragraph at lines 31207--31221 \OT1/cmr/m/n/10 ing Vari-ablerow-sum row-sum.data.framerowsumrowsum.data.frame row- Underfull \hbox (badness 5908) in paragraph at lines 31207--31221 \OT1/cmr/m/n/10 sum.defaultrowsumrowsum.default ma-niprow-sum Com-pute col-umn sums [302] [43 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31230 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31232 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31233 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31234 \item[\code{x}] a matrix, data frame or vector of numeric data. Mis... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31236 \item[\code{group}] a vector or factor giving the grouping, with one... ! Undefined control sequence. l.31237 per row of \code {x}. Missing values will be treated as another ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31239 \item[\code{reorder}] if \code{TRUE}, then the result will be in ord... ! Undefined control sequence. l.31239 \item[\code{reorder}] if \code {TRUE}, then the result will be in ord... ! Undefined control sequence. l.31240 \code {sort(unique(group))}, if \code{FALSE}, it will be in the order ! Undefined control sequence. l.31240 \code{sort(unique(group))}, if \code {FALSE}, it will be in the order ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31242 \item[\code{na.rm}] logical (\code{TRUE} or \code{FALSE}). Should \... ! Undefined control sequence. l.31242 \item[\code{na.rm}] logical (\code {TRUE} or \code{FALSE}). Should \... ! Undefined control sequence. l.31242 ...e{na.rm}] logical (\code{TRUE} or \code {FALSE}). Should \code{NA} ! Undefined control sequence. l.31242 ...e{TRUE} or \code{FALSE}). Should \code {NA} ! Undefined control sequence. l.31243 (including \code {NaN}) values be discarded? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31244 \item[\code{...}] other arguments to be passed to or from methods ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31245 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31246 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31248 \begin{Details} \relax ! Undefined control sequence. l.31249 ...to reorder the rows to agree with \code {tapply} as in ! Undefined control sequence. l.31251 ... are very many distinct values of \code {group} and ! Undefined control sequence. l.31252 \code {x} has few columns. ! Undefined control sequence. l.31257 ...he rows of a matrix (ie, a single \code {group}) use ! Undefined control sequence. l.31258 \code {\LinkA{colSums}{colSums}}, which should be even faster. ! Undefined control sequence. l.31258 \code{\LinkA {colSums}{colSums}}, which should be even faster. ! Undefined control sequence. l.31261 \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31262 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31264 \begin{Value} ! Undefined control sequence. l.31266 unique value of \code {group}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31267 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31269 \begin{SeeAlso} \relax ! Undefined control sequence. l.31270 \code {\LinkA{tapply}{tapply}}, \code{\LinkA{aggregate}{aggregate}}, ... ! Undefined control sequence. l.31270 \code{\LinkA {tapply}{tapply}}, \code{\LinkA{aggregate}{aggregate}}, ... ! Undefined control sequence. l.31270 \code{\LinkA{tapply}{tapply}}, \code {\LinkA{aggregate}{aggregate}}, ... ! Undefined control sequence. l.31270 ...e{\LinkA{tapply}{tapply}}, \code{\LinkA {aggregate}{aggregate}}, \... ! Undefined control sequence. l.31270 ...de{\LinkA{aggregate}{aggregate}}, \code {\LinkA{rowSums}{rowSums}} ! Undefined control sequence. l.31270 ...kA{aggregate}{aggregate}}, \code{\LinkA {rowSums}{rowSums}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31271 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ]... l.31273 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31274 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.31280 # # Slower versions ! You can't use `macro parameter character #' in horizontal mode. l.31280 ## Slower versions ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31284 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31285 \end{Examples} ! Undefined control sequence. l.31286 \HeaderA {sample}{Random Samples and Permutations}{sample} ! Undefined control sequence. l.31287 \methaliasA {sample.int}{sample}{sample.int} ! Undefined control sequence. l.31288 \keyword {distribution}{sample} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31290 \begin{Description} \relax ! Undefined control sequence. l.31291 \code {sample} takes a sample of the specified size from the elements ! Undefined control sequence. l.31292 of \code {x} using either with or without replacement. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31293 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31295 \begin{Usage} Underfull \hbox (badness 1622) in paragraph at lines 31277--31296 []\OT1/cmr/m/n/10 x <- ma-trix(runif(100), ncol = 5) group <- sam-ple(1:8, 20, TRUE) Overfull \hbox (48.74657pt too wide) in paragraph at lines 31301--31301 [] \OT1/cmtt/m/n/10 useHash = (!replace && is.null(prob) && size <= n /2 && n > 1e7))[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31302 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31304 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31305 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31306 \item[\code{x}] either a vector of one or more elements from which t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31308 \item[\code{n}] a positive number, the number of items to choose fro... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31310 \item[\code{size}] a non-negative integer giving the number of items... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31311 \item[\code{replace}] should sampling be with replacement? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31312 \item[\code{prob}] a vector of probability weights for obtaining the... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31314 \item[\code{useHash}] \code{\LinkA{logical}{logical}} indicating if ... ! Undefined control sequence. l.31314 \item[\code{useHash}] \code {\LinkA{logical}{logical}} indicating if ... ! Undefined control sequence. l.31314 \item[\code{useHash}] \code{\LinkA {logical}{logical}} indicating if ... ! Undefined control sequence. l.31315 ...ld be used. Can only be used for \code {replace = ! Undefined control sequence. l.31316 FALSE}, \code {prob = NULL}, and \code{size <= n/2}, and really ! Undefined control sequence. l.31316 ... FALSE}, \code{prob = NULL}, and \code {size <= n/2}, and really ! Undefined control sequence. l.31317 should be used for large \code {n}, as \code{useHash=FALSE} will use ! Undefined control sequence. l.31317 ...ld be used for large \code{n}, as \code {useHash=FALSE} will use ! Undefined control sequence. l.31318 memory proportional to \code {n}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31319 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31320 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31322 \begin{Details} [44 \relax ! Undefined control sequence. l.31323 If \code {x} has length 1, is numeric (in the sense of ! Undefined control sequence. l.31324 \code {\LinkA{is.numeric}{is.numeric}}) and \code{x >= 1}, sampling \... ! Undefined control sequence. l.31324 \code{\LinkA {is.numeric}{is.numeric}}) and \code{x >= 1}, sampling \... ! Undefined control sequence. l.31324 ...nkA{is.numeric}{is.numeric}}) and \code {x >= 1}, sampling \emph{via} ! Undefined control sequence. l.31325 \code {sample} takes place from \code{1:x}. \emph{Note} that this ! Undefined control sequence. l.31325 \code{sample} takes place from \code {1:x}. \emph{Note} that this ! Undefined control sequence. l.31326 ... lead to undesired behaviour when \code {x} is ! Undefined control sequence. l.31327 of varying length in calls such as \code {sample(x)}. See the examples. [303]] ! Undefined control sequence. l.31329 Otherwise \code {x} can be any \R{} object for which \code{length} and ! Undefined control sequence. l.31329 Otherwise \code{x} can be any \R {} object for which \code{length} and ! Undefined control sequence. l.31329 ... can be any \R{} object for which \code {length} and ! Undefined control sequence. l.31333 For \code {sample} the default for \code{size} is the number of items ! Undefined control sequence. l.31333 For \code{sample} the default for \code {size} is the number of items ! Undefined control sequence. l.31334 ... from the first argument, so that \code {sample(x)} generates a ! Undefined control sequence. l.31335 ...om permutation of the elements of \code {x} (or \code{1:x}). ! Undefined control sequence. l.31335 ...n of the elements of \code{x} (or \code {1:x}). ! Undefined control sequence. l.31337 It is allowed to ask for \code {size = 0} samples with \code{n = 0} or ! Undefined control sequence. l.31337 ... for \code{size = 0} samples with \code {n = 0} or ! Undefined control sequence. l.31338 a length-zero \code {x}, but otherwise \code{n > 0} or positive ! Undefined control sequence. l.31338 ...ngth-zero \code{x}, but otherwise \code {n > 0} or positive ! Undefined control sequence. l.31339 \code {length(x)} is required. ! Undefined control sequence. l.31341 ...eger positive numerical values of \code {n} or \code{x} will be ! Undefined control sequence. l.31341 ...e numerical values of \code{n} or \code {x} will be ! Undefined control sequence. l.31343 \code {\LinkA{.Machine}{.Machine}\$integer.max}. ! Undefined control sequence. l.31343 \code{\LinkA {.Machine}{.Machine}\$integer.max}. ! Undefined control sequence. l.31345 The optional \code {prob} argument can be used to give a vector of ! Undefined control sequence. l.31348 If \code {replace} is true, Walker's alias method (Ripley, 1987) is ! Undefined control sequence. l.31350 ...results incompatible with those from \R {} < 2.2.0. ! Undefined control sequence. l.31352 If \code {replace} is false, these probabilities are applied ! Undefined control sequence. l.31355 of nonzero weights must be at least \code {size} in this case. ! Undefined control sequence. l.31357 \code {sample.int} is a bare interface in which both \code{n} and ! Undefined control sequence. l.31357 ...is a bare interface in which both \code {n} and ! Undefined control sequence. l.31358 \code {size} must be supplied as integers. ! Undefined control sequence. l.31360 Argument \code {n} can be larger than the largest integer of ! Undefined control sequence. l.31361 type \code {integer}, up to the largest representable integer in type ! Undefined control sequence. l.31362 \code {double}. Only uniform sampling is supported. Two ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31364 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31366 \begin{Value} ! Undefined control sequence. l.31367 For \code {sample} a vector of length \code{size} with elements ! Undefined control sequence. l.31367 For \code{sample} a vector of length \code {size} with elements ! Undefined control sequence. l.31368 drawn from either \code {x} or from the integers \code{1:x}. ! Undefined control sequence. l.31368 ...her \code{x} or from the integers \code {1:x}. ! Undefined control sequence. l.31370 For \code {sample.int}, an integer vector of length \code{size} with ! Undefined control sequence. l.31370 ...int}, an integer vector of length \code {size} with ! Undefined control sequence. l.31371 elements from \code {1:n}, or a double vector if ! Undefined control sequence. l.31372 \eqn {n \ge 2^{31}}{}. ! Missing $ inserted. $ l.31372 \eqn{n \ge 2^{31}}{}. ! Extra }, or forgotten $. l.31372 \eqn{n \ge 2^{31}} {}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31373 \end{Value} ! Missing $ inserted. $ l.31373 \end{Value} ! Missing } inserted. } l.31373 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31375 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31381 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31383 \begin{SeeAlso} \relax ! Undefined control sequence. l.31384 \code {\LinkA{RNG}{RNG}} about random number generation. ! Undefined control sequence. l.31384 \code{\LinkA {RNG}{RNG}} about random number generation. ! Undefined control sequence. l.31386 CRAN package \Rhref {https://CRAN.R-project.org/package=sampling}{\pk... ! Undefined control sequence. l.31386 ...AN.R-project.org/package=sampling}{\pkg {sampling}} for other meth... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31388 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31390 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31391 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.31393 # a random permutation ! You can't use `macro parameter character #' in horizontal mode. l.31395 # bootstrap resampling -- only if length(x) > 1 ! Underfull \hbox (badness 2213) in paragraph at lines 31386--31397 []\OT1/cmr/m/n/10 CRAN pack-age https://CRAN.R-project.org/package=samplingsamp ling ! You can't use `macro parameter character #' in vertical mode. l.31398 # 100 Bernoulli trials ! You can't use `macro parameter character #' in vertical mode. l.31401 # # More careful bootstrapping -- Consider this when using sample() ! You can't use `macro parameter character #' in vertical mode. l.31401 ## More careful bootstrapping -- Consider this when using sample() ! You can't use `macro parameter character #' in horizontal mode. l.31402 # # programmatically (i.e., in your function or simulation)! ! You can't use `macro parameter character #' in horizontal mode. l.31402 ## programmatically (i.e., in your function or simulation)! ! You can't use `macro parameter character #' in vertical mode. l.31404 # sample()'s surprise -- example ! You can't use `macro parameter character #' in horizontal mode. l.31406 sample(x[x > 8]) # length 2 ! You can't use `macro parameter character #' in horizontal mode. l.31407 sample(x[x > 9]) # oops -- length 10! ! You can't use `macro parameter character #' in horizontal mode. l.31408 sample(x[x > 10]) # length 0 ! You can't use `macro parameter character #' in vertical mode. l.31410 # # safer version: ! You can't use `macro parameter character #' in vertical mode. l.31410 ## safer version: ! You can't use `macro parameter character #' in horizontal mode. l.31412 resample(x[x > 8]) # length 2 ! You can't use `macro parameter character #' in horizontal mode. l.31413 resample(x[x > 9]) # length 1 ! You can't use `macro parameter character #' in horizontal mode. l.31414 resample(x[x > 10]) # length 0 ! You can't use `macro parameter character #' in vertical mode. l.31416 # # R 3.x.y only ! You can't use `macro parameter character #' in vertical mode. l.31416 ## R 3.x.y only ! You can't use `macro parameter character #' in horizontal mode. l.31418 sample.int(1e10, 12) # not that there is much chance of duplicates ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31419 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31420 \end{Examples} ! Undefined control sequence. l.31421 \HeaderA {save}{Save R Objects}{save} ! Undefined control sequence. l.31422 \methaliasA {save.image}{save}{save.image} ! Undefined control sequence. l.31423 \keyword {file}{save} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31425 \begin{Description} \relax ! Undefined control sequence. l.31426 \code {save} writes an external representation of \R{} objects to the ! Undefined control sequence. l.31426 ...writes an external representation of \R {} objects to the ! Undefined control sequence. l.31428 date by using the function \code {\LinkA{load}{load}} or \code{\LinkA... ! Undefined control sequence. l.31428 date by using the function \code{\LinkA {load}{load}} or \code{\LinkA... ! Undefined control sequence. l.31428 ...tion \code{\LinkA{load}{load}} or \code {\LinkA{attach}{attach}} ! Undefined control sequence. l.31428 ...ode{\LinkA{load}{load}} or \code{\LinkA {attach}{attach}} ! Undefined control sequence. l.31429 (or \code {\LinkA{data}{data}} in some cases). ! Undefined control sequence. l.31429 (or \code{\LinkA {data}{data}} in some cases). ! Undefined control sequence. l.31431 \code {save.image()} is just a short-cut for `save my current ! Undefined control sequence. l.31432 workspace', i.e., \code {save(list = ls(all.names = TRUE), file = ! Undefined control sequence. l.31434 It is also what happens with \code {\LinkA{q}{q}("yes")}. ! Undefined control sequence. l.31434 It is also what happens with \code{\LinkA {q}{q}("yes")}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31435 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31437 \begin{Usage} [304] [45 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31448 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31450 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31451 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31452 \item[\code{...}] the names of the objects to be saved (as symbols or ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31454 \item[\code{list}] A character vector containing the names of object... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31456 \item[\code{file}] a (writable binary-mode) \LinkA{connection}{conne... ! Undefined control sequence. l.31456 ...{file}] a (writable binary-mode) \LinkA {connection}{connection} o... ! Undefined control sequence. l.31457 ...ere the data will be saved (when \LinkA {tilde expansion}{tilde ex... ! Undefined control sequence. l.31458 is done). Must be a file name for \code {save.image} or ! Undefined control sequence. l.31459 \code {version = 1}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31460 \item[\code{ascii}] if \code{TRUE}, an ASCII representation of the d... ! Undefined control sequence. l.31460 \item[\code{ascii}] if \code {TRUE}, an ASCII representation of the d... ! Undefined control sequence. l.31461 written. The default value of \code {ascii} is \code{FALSE} which ! Undefined control sequence. l.31461 ... default value of \code{ascii} is \code {FALSE} which ! Undefined control sequence. l.31462 ... a binary file being written. If \code {NA} and ! Undefined control sequence. l.31463 \code {version >= 2}, a different ASCII representation is used which ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31465 \item[\code{version}] the workspace format version to use. \code{NULL} ! Undefined control sequence. l.31465 ...workspace format version to use. \code ] {NULL} ! Undefined control sequence. l.31466 ...fault format. The version used from \R {} ! Undefined control sequence. l.31467 0.99.0 to \R {} 1.3.1 was version 1. The default format as from \R{} ! Undefined control sequence. l.31467 ...rsion 1. The default format as from \R {} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31469 \item[\code{envir}] environment to search for objects to be saved. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31470 \item[\code{compress}] logical or character string specifying whethe... ! Undefined control sequence. l.31471 ...amed file is to use compression. \code {TRUE} corresponds to ! Undefined control sequence. l.31472 \command {gzip} compression, and character strings \code{"gzip"}, ! Undefined control sequence. l.31472 ...ompression, and character strings \code {"gzip"}, ! Undefined control sequence. l.31473 \code {"bzip2"} or \code{"xz"} specify the type of ! Undefined control sequence. l.31473 \code{"bzip2"} or \code {"xz"} specify the type of ! Undefined control sequence. l.31474 compression. Ignored when \code {file} is a connection and ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31476 \item[\code{compression\_level}] integer: the level of compression t... ! Undefined control sequence. l.31477 used. Defaults to \code {6} for \command{gzip} compression and to ! Undefined control sequence. l.31477 used. Defaults to \code{6} for \command {gzip} compression and to ! Undefined control sequence. l.31478 \code {9} for \command{bzip2} or \command{xz} compression. ! Undefined control sequence. l.31478 \code{9} for \command {bzip2} or \command{xz} compression. ! Undefined control sequence. l.31478 \code{9} for \command{bzip2} or \command {xz} compression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31479 \item[\code{eval.promises}] logical: should objects which are promis... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31481 \item[\code{precheck}] logical: should the existence of the objects be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31484 \item[\code{safe}] logical. If \code{TRUE}, a temporary file is use... ! Undefined control sequence. l.31484 \item[\code{safe}] logical. If \code {TRUE}, a temporary file is use... ! Undefined control sequence. l.31486 \code {file} if the save succeeds. This preserves an existing ! Undefined control sequence. l.31487 workspace \code {file} if the save fails, but at the cost of using ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31489 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31490 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31492 \begin{Details} \relax ! Undefined control sequence. l.31494 strings) in \code {...} or as a character vector in \code{list} are ! Undefined control sequence. l.31494 ...{...} or as a character vector in \code {list} are ! Undefined control sequence. l.31495 ...k up the objects from environment \code {envir}. By default ! Undefined control sequence. l.31496 \LinkA {promises}{promises} are evaluated, but if \code{eval.promises... ! Undefined control sequence. l.31496 ...}{promises} are evaluated, but if \code {eval.promises = FALSE} ! Undefined control sequence. l.31500 All \R {} platforms use the XDR (bigendian) representation of C ints and ! Undefined control sequence. l.31501 ...s, and these are portable across all \R {} ! Undefined control sequence. l.31510 on the \R {} platform. [305] ! Undefined control sequence. l.31512 Default values for the \code {ascii}, \code{compress}, \code{safe} and ! Undefined control sequence. l.31512 Default values for the \code{ascii}, \code {compress}, \code{safe} and ! Undefined control sequence. l.31512 ...he \code{ascii}, \code{compress}, \code {safe} and ! Undefined control sequence. l.31513 \code {version} arguments can be modified with the ! Undefined control sequence. l.31514 \code {"save.defaults"} option (used both by \code{save} and ! Undefined control sequence. l.31514 ...e.defaults"} option (used both by \code {save} and ! Undefined control sequence. l.31515 \code {save.image}), see also the `Examples' section. If a ! Undefined control sequence. l.31516 \code {"save.image.defaults"} option is set it is used in preference to ! Undefined control sequence. l.31517 \code {"save.defaults"} for function \code{save.image} (which allows ! Undefined control sequence. l.31517 \code{"save.defaults"} for function \code {save.image} (which allows ! Undefined control sequence. l.31519 \code {compression\_level} can be part of the \code{"save.defaults"} ! Undefined control sequence. l.31519 ...ession\_level} can be part of the \code {"save.defaults"} ! Undefined control sequence. l.31523 \code {"wb"}. Supplying a connection which is open and not in binary ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31525 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31527 \begin{Section} {Compression} ! Undefined control sequence. l.31529 particular 46MB \R {} object was saved as 35MB without compression in 2 ! Undefined control sequence. l.31530 seconds, 22MB with \command {gzip} compression in 8 secs, 19MB with ! Undefined control sequence. l.31531 \command {bzip2} compression in 13 secs and 9.4MB with \command{xz} ! Undefined control sequence. l.31531 ...sion in 13 secs and 9.4MB with \command {xz} ! Undefined control sequence. l.31534 ... do depend on the actual file: \command {xz} compressed ! Undefined control sequence. l.31537 ...ssible to compress later (with \command {gzip}, \command{bzip2} ! Undefined control sequence. l.31537 ...ss later (with \command{gzip}, \command {bzip2} ! Undefined control sequence. l.31538 or \command {xz}) a file saved with \code{compress = FALSE}: the effect ! Undefined control sequence. l.31538 or \command{xz}) a file saved with \code {compress = FALSE}: the effect ! Undefined control sequence. l.31541 (and see \code {\LinkA{resaveRdaFiles}{resaveRdaFiles}} for a way to ... ! Undefined control sequence. l.31541 (and see \code{\LinkA {resaveRdaFiles}{resaveRdaFiles}} for a way to ... ! Undefined control sequence. l.31541 ...les}} for a way to do so from within \R {}). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. [46> Type H for immediate help. ... l.31542 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31544 \begin{Section} {Parallel compression} ! Undefined control sequence. l.31545 That \code {file} can be a connection can be exploited to make use of ! Undefined control sequence. l.31546 ...el compression utility such as \command {pigz} ! Undefined control sequence. l.31547 (\url {http://zlib.net/pigz/}) or \command{pbzip2} ! Undefined control sequence. l.31547 (\url{http://zlib.net/pigz/}) or \command {pbzip2} ! Undefined control sequence. l.31548 (\url {http://compression.ca/pbzip2/}) \emph{via} a \code{\LinkA{pipe... ! Undefined control sequence. l.31548 ...ression.ca/pbzip2/}) \emph{via} a \code {\LinkA{pipe}{pipe}} ! Undefined control sequence. l.31548 ....ca/pbzip2/}) \emph{via} a \code{\LinkA {pipe}{pipe}} ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31550 \begin{alltt} con <- pipe("pigz -p8 > fname.gz", "wb") ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31558 \end{alltt} ! Undefined control sequence. l.31560 where the last requires \command {xz} 5.1.1 or later built with support ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31563 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31565 \begin{Section} {Warnings} ! Undefined control sequence. l.31566 The \code {...} arguments only give the \emph{names} of the objects ! Undefined control sequence. l.31568 \code {envir} argument, and the actual objects given as arguments need ! Undefined control sequence. l.31571 Saved \R {} objects are binary files, even those saved with ! Undefined control sequence. l.31572 \code {ascii = TRUE}, so ensure that they are transferred without ! Undefined control sequence. l.31576 ...efault version has not changed since \R {} 1.4.0, this ! Undefined control sequence. l.31578 ...ved image into an earlier version of \R {} ! Undefined control sequence. l.31582 ...ion' was long vectors, introduced in \R {} ! Undefined control sequence. l.31585 Loading files saved with \code {ASCII = NA} requires a C99-compliant C ! Undefined control sequence. l.31586 function \code {sscanf}: this is a problem on Windows, first worked ! Undefined control sequence. l.31587 around in \R {} 3.1.2: they should be readable in earlier versions of.. [37]. ! Undefined control sequence. l.31587 ...d be readable in earlier versions of \R {} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31589 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31591 \begin{Note} \relax ! Undefined control sequence. l.31593 current directory. For \code {save.image} and for saving at the end of ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31595 \begin{alltt} Error in gzfile(file, "wb") : unable to open connec... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31600 \end{alltt} [306] [38]] [47 ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31602 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31604 \begin{SeeAlso} \relax ! Undefined control sequence. l.31605 \code {\LinkA{dput}{dput}}, \code{\LinkA{dump}{dump}}, \code{\LinkA{l... ! Undefined control sequence. l.31605 \code{\LinkA {dput}{dput}}, \code{\LinkA{dump}{dump}}, \code{\LinkA{l... ! Undefined control sequence. l.31605 \code{\LinkA{dput}{dput}}, \code {\LinkA{dump}{dump}}, \code{\LinkA{l... ! Undefined control sequence. l.31605 \code{\LinkA{dput}{dput}}, \code{\LinkA {dump}{dump}}, \code{\LinkA{l... ! Undefined control sequence. l.31605 ...put}}, \code{\LinkA{dump}{dump}}, \code {\LinkA{load}{load}}, ! Undefined control sequence. l.31605 ...\code{\LinkA{dump}{dump}}, \code{\LinkA {load}{load}}, ! Undefined control sequence. l.31606 \code {\LinkA{data}{data}}. ! Undefined control sequence. l.31606 \code{\LinkA {data}{data}}. ! Undefined control sequence. l.31609 \code {\LinkA{serialize}{serialize}} and \code{\LinkA{saveRDS}{saveRD... ! Undefined control sequence. l.31609 \code{\LinkA {serialize}{serialize}} and \code{\LinkA{saveRDS}{saveRD... ! Undefined control sequence. l.31609 ...\LinkA{serialize}{serialize}} and \code {\LinkA{saveRDS}{saveRDS}}. ! Undefined control sequence. l.31609 ...serialize}{serialize}} and \code{\LinkA {saveRDS}{saveRDS}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31610 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31612 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31613 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.31621 # set save defaults using option: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31625 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31626 \end{Examples} ! Undefined control sequence. l.31627 \HeaderA {scale}{Scaling and Centering of Matrix-like Objects}{scale} ! Undefined control sequence. l.31628 \methaliasA {scale.default}{scale}{scale.default} ! Undefined control sequence. l.31629 \keyword Chapter 9 [39] {array}{scale} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31631 \begin{Description} \relax ! Undefined control sequence. l.31632 \code {scale} is generic function whose default method centers and/or ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31634 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31636 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31640 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31642 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31643 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31644 \item[\code{x}] a numeric matrix(like object). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31645 \item[\code{center}] either a logical value or a numeric vector of l... ! Undefined control sequence. l.31646 equal to the number of columns of \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31647 \item[\code{scale}] either a logical value or a numeric vector of le... ! Undefined control sequence. l.31648 equal to the number of columns of \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31649 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31650 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.31652 \begin{Details} \relax ! Undefined control sequence. l.31653 The value of \code {center} determines how column centering is ! Undefined control sequence. l.31654 performed. If \code {center} is a numeric vector with length equal to ! Undefined control sequence. l.31655 the number of columns of \code {x}, then each column of \code{x} has ! Undefined control sequence. l.31655 ... of \code{x}, then each column of \code {x} has ! Undefined control sequence. l.31656 the corresponding value from \code {center} subtracted from it. If ! Undefined control sequence. l.31657 \code {center} is \code{TRUE} then centering is done by subtracting the ! Undefined control sequence. l.31657 \code{center} is \code {TRUE} then centering is done by subtracting the ! Undefined control sequence. l.31658 column means (omitting \code {NA}s) of \code{x} from their ! Undefined control sequence. l.31658 ...mn means (omitting \code{NA}s) of \code {x} from their ! Undefined control sequence. l.31659 corresponding columns, and if \code {center} is \code{FALSE}, no ! Undefined control sequence. l.31659 ... columns, and if \code{center} is \code {FALSE}, no ! Undefined control sequence. l.31662 The value of \code {scale} determines how column scaling is performed ! Undefined control sequence. l.31663 (after centering). If \code {scale} is a numeric vector with length ! Undefined control sequence. l.31664 equal to the number of columns of \code {x}, then each column of ! Undefined control sequence. l.31665 \code {x} is divided by the corresponding value from \code{scale}. ! Undefined control sequence. l.31665 ...d by the corresponding value from \code {scale}. ! Undefined control sequence. l.31666 If \code {scale} is \code{TRUE} then scaling is done by dividing the ! Undefined control sequence. l.31666 If \code{scale} is \code {TRUE} then scaling is done by dividing the ! Undefined control sequence. l.31667 (centered) columns of \code {x} by their standard deviations if ! Undefined control sequence. l.31668 \code {center} is \code{TRUE}, and the root mean square otherwise. ! Undefined control sequence. l.31668 \code{center} is \code {TRUE}, and the root mean square otherwise. ! Undefined control sequence. l.31669 If \code {scale} is \code{FALSE}, no scaling is done. ! Undefined control sequence. l.31669 If \code{scale} is \code {FALSE}, no scaling is done. ! Undefined control sequence. l.31672 \eqn {\sqrt{\sum(x^2)/(n-1)}}{}, where \eqn{x}{} is ! Missing $ inserted. $ l.31672 \eqn{\sqrt{ \sum(x^2)/(n-1)}}{}, where \eqn{x}{} is ! Extra }, or forgotten $. l.31672 \eqn{\sqrt{\sum(x^2)/(n-1)}} {}, where \eqn{x}{} is ! Undefined control sequence. l.31672 \eqn{\sqrt{\sum(x^2)/(n-1)}}{}, where \eqn {x}{} is ! Undefined control sequence. l.31673 ...ctor of the non-missing values and \eqn {n}{} is the number of ! Undefined control sequence. l.31674 non-missing values. In the case \code {center = TRUE}, this is the ! Undefined control sequence. l.31677 \code {scale(x, center = FALSE, scale = apply(x, 2, sd, na.rm = TRUE)... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31678 \end{Details} ! Missing $ inserted. $ l.31678 \end{Details} ! Missing } inserted. } l.31678 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31680 \begin{Value} ! Undefined control sequence. l.31681 For \code {scale.default}, the centered, scaled matrix. The numeric ! Undefined control sequence. l.31683 \code {"scaled:center"} and \code{"scaled:scale"} ! Undefined control sequence. l.31683 \code{"scaled:center"} and \code {"scaled:scale"} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31684 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31686 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31690 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31692 \begin{SeeAlso} \relax ! Undefined control sequence. l.31693 \code {\LinkA{sweep}{sweep}} which allows centering (and scaling) with ! Undefined control sequence. l.31693 \code{\LinkA {sweep}{sweep}} which allows centering (and scaling) with Underfull \hbox (badness 10000) in paragraph at lines 31671--31695 []\OT1/cmr/m/n/10 The root-mean-square for a (pos-si-bly cen-tered) col-umn Underfull \hbox (badness 10000) in paragraph at lines 31671--31695 \OT1/cmr/m/n/10 is de-fined as $[][]\OML/cmm/m/it/10 ; wherex[]isavectoroftheno n \OMS/cmsy/m/n/10 ^^@ Overfull \hbox (832.02692pt too wide) in paragraph at lines 31671--31695 \OML/cmm/m/it/10 missingvaluesandn[]isthenumberofnon \OMS/cmsy/m/n/10 ^^@ \OML/ cmm/m/it/10 missingvalues:Inthecase[]; thisisthesameasthestandarddeviation; but ingeneralitisnot:\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Toscalebythestandarddeviatio nswithoutcentering; use[]:\OT1/cmr/m/n/10 )$ ! Undefined control sequence. l.31696 ...ing with the scale of a plot, see \code {\LinkA{par}{par}}. ! Undefined control sequence. l.31696 ...h the scale of a plot, see \code{\LinkA {par}{par}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31697 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31699 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31700 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.31704 cov(centered.scaled.x <- scale(x)) # all 1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31705 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31706 \end{Examples} ! Undefined control sequence. l.31707 \HeaderA {scan}{Read Data Values}{scan} ! Undefined control sequence. l.31708 \keyword {file}{scan} ! Undefined control sequence. l.31709 \keyword {connection}{scan} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31711 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31713 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31715 \begin{Usage} [307 [48] [40 Overfull \hbox (11.99689pt too wide) in paragraph at lines 31724--31724 [] \OT1/cmtt/m/n/10 fileEncoding = "", encoding = "unknown", text, skipNul = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31725 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31727 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31728 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31729 \item[\code{file}] the name of a file to read data values from. If the ! Undefined control sequence. l.31730 specified file is \code {""}, then input is taken from the keyboard ! Undefined control sequence. l.31731 (or whatever \code {\LinkA{stdin}{stdin}()} reads if input is redirec... ! Undefined control sequence. l.31731 (or whatever \code{\LinkA {stdin}{stdin}()} reads if input is redirec... ! Undefined control sequence. l.31732 \R {} is embedded). ! Undefined control sequence. l.31734 signal, \samp {Ctrl-D} on Unix and \samp{Ctrl-Z} on Windows.) ! Undefined control sequence. l.31734 signal, \samp{Ctrl-D} on Unix and \samp {Ctrl-Z} on Windows.) ! Undefined control sequence. l.31737 current working directory (given by \code {\LinkA{getwd}{getwd}()}), ! Undefined control sequence. l.31737 ...orking directory (given by \code{\LinkA {getwd}{getwd}()}), ! Undefined control sequence. l.31740 When running \R {} from a script, \code{file = "stdin"} can be used to ! Undefined control sequence. l.31740 When running \R{} from a script, \code {file = "stdin"} can be used to ! Undefined control sequence. l.31741 refer to the process's \code {stdin} file stream. ! Undefined control sequence. l.31743 This can be a compressed file (see \code {\LinkA{file}{file}}). ! Undefined control sequence. l.31743 ... be a compressed file (see \code{\LinkA {file}{file}}). ! Undefined control sequence. l.31745 Alternatively, \code {file} can be a \code{\LinkA{connection}{connect... ! Undefined control sequence. l.31745 Alternatively, \code{file} can be a \code {\LinkA{connection}{connect... ! Undefined control sequence. l.31745 ...vely, \code{file} can be a \code{\LinkA {connection}{connection}}, ! Undefined control sequence. l.31749 and so will match \code {sep = "\bsl{}n"}. ! Undefined control sequence. l.31749 and so will match \code{sep = "\bsl {}n"}. ! Undefined control sequence. l.31751 \code {file} can also be a complete URL. (For the supported URL ! Undefined control sequence. l.31753 \code {\LinkA{url}{url}}.) ! Undefined control sequence. l.31753 \code{\LinkA {url}{url}}.) ! Undefined control sequence. l.31757 \code {\LinkA{file}{file}} connection setting its \code{encoding} arg... ! Undefined control sequence. l.31757 \code{\LinkA {file}{file}} connection setting its \code{encoding} arg... ! Undefined control sequence. l.31757 ...le}{file}} connection setting its \code {encoding} argument ! Undefined control sequence. l.31758 (or \code {scan}'s \code{fileEncoding} argument). ! Undefined control sequence. l.31758 (or \code{scan}'s \code {fileEncoding} argument). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31761 \item[\code{what}] the \LinkA{type}{type} of \code{what} gives the t... ! Undefined control sequence. l.31761 \item[\code{what}] the \LinkA {type}{type} of \code{what} gives the t... ! Undefined control sequence. l.31761 ...{what}] the \LinkA{type}{type} of \code {what} gives the type of d... ! Undefined control sequence. l.31763 \code {\LinkA{typeof}{typeof}}.) The supported types are \code{logic... ! Undefined control sequence. l.31763 \code{\LinkA {typeof}{typeof}}.) The supported types are \code{logic... ! Undefined control sequence. l.31763 ...peof}}.) The supported types are \code {logical}, ! Undefined control sequence. l.31764 \code {integer}, \code{numeric}, \code{complex}, \code{character}, ! Undefined control sequence. l.31764 \code{integer}, \code {numeric}, \code{complex}, \code{character}, ! Undefined control sequence. l.31764 \code{integer}, \code{numeric}, \code {complex}, \code{character}, ! Undefined control sequence. l.31764 ..., \code{numeric}, \code{complex}, \code {character}, ! Undefined control sequence. l.31765 \code {raw} and \code{\LinkA{list}{list}}. If \code{what} is a list,... ! Undefined control sequence. l.31765 \code{raw} and \code {\LinkA{list}{list}}. If \code{what} is a list,... ! Undefined control sequence. l.31765 \code{raw} and \code{\LinkA {list}{list}}. If \code{what} is a list,... ! Undefined control sequence. l.31765 ...nd \code{\LinkA{list}{list}}. If \code {what} is a list, it is ! Undefined control sequence. l.31767 \code {length(what)} items (`fields') and the list components ! Undefined control sequence. l.31768 ... which are one of the first six (\LinkA {atomic}{atomic}) ! Undefined control sequence. l.31769 types listed or \code {NULL}, see section `Details' below. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31771 \item[\code{nmax}] integer: the maximum number of data values to be ... ! Undefined control sequence. l.31772 \code {what} is a list, the maximum number of records to be read. If ! Undefined control sequence. l.31774 (and \code {nlines} is not set to a positive value), \code{scan} will ! Undefined control sequence. l.31774 ... is not set to a positive value), \code {scan} will ! Undefined control sequence. l.3]]1775 read to the end of \code {file}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31777 \item[\code{n}] integer: the maximum number of data values to be rea... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31780 \item[\code{sep}] by default, scan expects to read `white-space' ! Undefined control sequence. l.31781 ...ted input fields. Alternatively, \code {sep} can be used to ! Undefined control sequence. l.31786 or \code {NULL} or a character string containing just one single-byte ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31790 \item[\code{quote}] the set of quoting characters as a single character ! Undefined control sequence. l.31791 string or \code {NULL}. In a multibyte locale the quoting characters ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31794 \item[\code{dec}] decimal point character. This should be a charact... ! Undefined control sequence. l.31795 ...just one single-byte character. (\code {NULL} and a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31799 \item[\code{skip}] the number of lines of the input file to skip be... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31802 \item[\code{nlines}] if positive, the maximum number of lines of dat... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31804 \item[\code{na.strings}] character vector. Elements of this vector ... ! Undefined control sequence. l.31805 interpreted as missing (\code {\LinkA{NA}{NA}}) values. Blank fields... ! Undefined control sequence. l.31805 interpreted as missing (\code{\LinkA {NA}{NA}}) values. Blank fields... ! Undefined control sequence. l.31808 ...ce is stripped from the input, so \code {na.strings} values [308 Chapter 10 [41] [49] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31811 \item[\code{flush}] logical: if \code{TRUE}, \code{scan} will flush ... ! Undefined control sequence. l.31811 \item[\code{flush}] logical: if \code {TRUE}, \code{scan} will flush ... ! Undefined control sequence. l.31811 ...{flush}] logical: if \code{TRUE}, \code {scan} will flush to the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31816 \item[\code{fill}] logical: if \code{TRUE}, \code{scan} will implici... ! Undefined control sequence. l.31816 \item[\code{fill}] logical: if \code {TRUE}, \code{scan} will implici... ! Undefined control sequence. l.31816 ...e{fill}] logical: if \code{TRUE}, \code {scan} will implicitly add ! Undefined control sequence. l.31818 \code {what}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31820 \item[\code{strip.white}] vector of logical value(s) corresponding t... ! Undefined control sequence. l.31821 in the \code {what} argument. It is used only when \code{sep} has ! Undefined control sequence. l.31821 ...} argument. It is used only when \code {sep} has ! Undefined control sequence. l.31823 `white space' from \code {character} fields (\code{numeric} fields ! Undefined control sequence. l.31823 ...ce' from \code{character} fields (\code {numeric} fields ! Undefined control sequence. l.31827 If \code {strip.white} is of length 1, it applies to all fields; ! Undefined control sequence. l.31828 otherwise, if \code {strip.white[i]} is \code{TRUE} \emph{and} the ! Undefined control sequence. l.31828 ...wise, if \code{strip.white[i]} is \code {TRUE} \emph{and} the ! Undefined control sequence. l.31829 \code {i}-th field is of mode character (because \code{what[i]} is) ! Undefined control sequence. l.31829 ...eld is of mode character (because \code {what[i]} is) ! Undefined control sequence. l.31830 ...g unquoted white space from field \code {i} is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31834 \item[\code{quiet}] logical: if \code{FALSE} (default), scan() will ... ! Undefined control sequence. l.31834 \item[\code{quiet}] logical: if \code {FALSE} (default), scan() will ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31837 \item[\code{blank.lines.skip}] logical: if \code{TRUE} blank lines i... ! Undefined control sequence. l.31837 ...de{blank.lines.skip}] logical: if \code {TRUE} blank lines in the ! Undefined control sequence. l.31838 ...are ignored, except when counting \code {skip} and \code{nlines}. ! Undefined control sequence. l.31838 ...ept when counting \code{skip} and \code {nlines}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31840 \item[\code{multi.line}] logical. Only used if \code{what} is a lis... ! Undefined control sequence. l.31840 ...lti.line}] logical. Only used if \code {what} is a list. If ! Undefined control sequence. l.31841 \code {FALSE}, all of a record must appear on one line (but more than ! Undefined control sequence. l.31842 ... a single line). Note that using \code {fill = TRUE} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31845 \item[\code{comment.char}] character: a character vector of length one ! Undefined control sequence. l.31846 ...haracter or an empty string. Use \code {""} to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31849 \item[\code{allowEscapes}] logical. Should C-style escapes such as ! Undefined control sequence. l.31850 \samp {\bsl{}n} be processed (the default) or read verbatim? Note t... ! Undefined control sequence. l.31850 \samp{\bsl {}n} be processed (the default) or read verbatim? Note t... ! Undefined control sequence. l.31855 \samp {\bsl{}a, \bsl{}b, \bsl{}f, \bsl{}n, \bsl{}r, \bsl{}t, \bsl{}v}... ! Undefined control sequence. l.31855 \samp{\bsl {}a, \bsl{}b, \bsl{}f, \bsl{}n, \bsl{}r, \bsl{}t, \bsl{}v}... ! Undefined control sequence. l.31855 \samp{\bsl{}a, \bsl {}b, \bsl{}f, \bsl{}n, \bsl{}r, \bsl{}t, \bsl{}v}... ! Undefined control sequence. l.31855 \samp{\bsl{}a, \bsl{}b, \bsl {}f, \bsl{}n, \bsl{}r, \bsl{}t, \bsl{}v}... ! Undefined control sequence. l.31855 \samp{\bsl{}a, \bsl{}b, \bsl{}f, \bsl {}n, \bsl{}r, \bsl{}t, \bsl{}v}... ! Undefined control sequence. l.31855 ...bsl{}a, \bsl{}b, \bsl{}f, \bsl{}n, \bsl {}r, \bsl{}t, \bsl{}v} and... ! Undefined control sequence. l.31855 ...bsl{}b, \bsl{}f, \bsl{}n, \bsl{}r, \bsl {}t, \bsl{}v} and octal and ! Undefined control sequence. l.31855 ...bsl{}f, \bsl{}n, \bsl{}r, \bsl{}t, \bsl {}v} and octal and ! Undefined control sequence. l.31856 hexadecimal representations like \samp {\bsl{}040} and \samp{\bsl{}0x... ! Undefined control sequence. l.31856 ...decimal representations like \samp{\bsl {}040} and \samp{\bsl{}0x2... ! Undefined control sequence. l.31856 ...tations like \samp{\bsl{}040} and \samp {\bsl{}0x2A}. Any ! Undefined control sequence. l.31856 ...ns like \samp{\bsl{}040}] [42 and \samp{\bsl {}0x2A}. Any ! Undefined control sequence. l.31858 Note that Unicode escapes (starting \samp {\bsl{}u} or \samp{\bsl{}U}... ! Undefined control sequence. l.31858 ...at Unicode escapes (starting \samp{\bsl {}u} or \samp{\bsl{}U}: see ! Undefined control sequence. l.31858 ...capes (starting \samp{\bsl{}u} or \samp {\bsl{}U}: see ! Undefined control sequence. l.31858 ... (starting \samp{\bsl{}u} or \samp{\bsl {}U}: see ! Undefined control sequence. l.31859 \LinkA {Quotes}{Quotes}) are never processed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31862 \item[\code{fileEncoding}] character string: if non-empty declares the ! Undefined control sequence. l.31865 of the help for \code {\LinkA{file}{file}}, and the `R Data ! Undefined control sequence. l.31865 of the help for \code{\LinkA {file}{file}}, and the `R Data ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31869 \item[\code{encoding}] encoding to be assumed for input strings. If... ! Undefined control sequence. l.31870 value is \code {"latin1"} or \code{"UTF-8"} it is used to mark ! Undefined control sequence. l.31870 value is \code{"latin1"} or \code {"UTF-8"} it is used to mark ! Undefined control sequence. l.31872 to re-encode the input (see \code {fileEncoding}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31876 \item[\code{text}] character string: if \code{file} is not supplied ... ! Undefined control sequence. l.31876 ...\code{text}] character string: if \code {file} is not supplied and... ! Undefined control sequence. l.31877 then data are read from the value of \code {text} via a text connection. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31880 \item[\code{skipNul}] logical: should nuls be skipped when reading c... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31882 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31883 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31885 \begin{Details} \relax ! Undefined control sequence. l.31886 The value of \code {what} can be a list of types, in which case ! Undefined control sequence. l.31887 \code {scan} returns a list of vectors with the types given by the ! Undefined control sequence. l.31888 types of the elements in \code {what}. This provides a way of reading ! Undefined control sequence. l.31889 ...nar data. If any of the types is \code {NULL}, the corresponding ! Undefined control sequence. l.31890 field is skipped (but a \code {NULL} component appears in the result). [309]] [50 ! Undefined control sequence. l.31892 The type of \code {what} or its components can be one of the six ! Undefined control sequence. l.31893 atomic vector types or \code {NULL} (see \code{\LinkA{is.atomic}{is.a... ! Undefined control sequence. l.31893 ... vector types or \code{NULL} (see \code {\LinkA{is.atomic}{is.atom... ! Undefined control sequence. l.31893 ... types or \code{NULL} (see \code{\LinkA {is.atomic}{is.atomic}}). ! Undefined control sequence. l.31899 ...' includes the non-breaking space \samp {"\bsl{}xa0"}. ! Undefined control sequence. l.31899 ...udes the non-breaking space \samp{"\bsl {}xa0"}. ! Undefined control sequence. l.31903 \code {na.strings} contains \code{""} when they are regarded as missing ! Undefined control sequence. l.31903 \code{na.strings} contains \code {""} when they are regarded as missing ! Undefined control sequence. l.31907 either \code {NA} or an optional sign followed by a decimal or ! Undefined control sequence. l.31908 hexadecimal constant (see \LinkA {NumericConstants}{NumericConstants}... ! Undefined control sequence. l.31908 ...Constants}{NumericConstants}), or \code {NaN}, ! Undefined control sequence. l.31909 \code {Inf} or \code{infinity} (ignoring case). Out-of-range values ! Undefined control sequence. l.31909 \code{Inf} or \code {infinity} (ignoring case). Out-of-range values ! Undefined control sequence. l.31910 are recorded as \code {Inf}, \code{-Inf} or \code{0}. ! Undefined control sequence. l.31910 are recorded as \code{Inf}, \code {-Inf} or \code{0}. ! Undefined control sequence. l.31910 ...ded as \code{Inf}, \code{-Inf} or \code {0}. ! Undefined control sequence. l.31913 followed by either \code {NA} or an optional sign and one or more ! Undefined control sequence. l.31914 digits (\samp {0-9}): all out-of-range values are converted to ! Undefined control sequence. l.31915 \code {NA\_integer\_}. ! Undefined control sequence. l.31917 If \code {sep} is the default (\code{""}), the character \samp{\bsl{}} ! Undefined control sequence. l.31917 If \code{sep} is the default (\code {""}), the character \samp{\bsl{}} ! Undefined control sequence. l.31917 ...efault (\code{""}), the character \samp {\bsl{}} ! Undefined control sequence. l.31917 ...t (\code{""}), the character \samp{\bsl {}} ! Undefined control sequence. l.31921 If \code {sep} is non-default, the fields may be quoted in the style of ! Undefined control sequence. l.31922 \file {.csv} files where separators inside quotes (\code{''} or ! Undefined control sequence. l.31922 ...s where separators inside quotes (\code {''} or ! Undefined control sequence. l.31923 \code {""}) are ignored and quotes may be put inside strings by ! Undefined control sequence. l.31924 doubling them. However, if \code {sep = "\bsl{}n"} it is assumed ! Undefined control sequence. l.31924 ...ng them. However, if \code{sep = "\bsl {}n"} it is assumed ! Undefined control sequence. l.31927 ...preted in character fields and in \code {NULL} ! Undefined control sequence. l.31930 Note that since \code {sep} is a separator and not a terminator, ! Undefined control sequence. l.31931 reading a file by \code {scan("foo", sep = "\bsl{}n", blank.lines.ski... ! Undefined control sequence. l.31931 ...a file by \code{scan("foo", sep = "\bsl {}n", blank.lines.skip = F... ! Undefined control sequence. l.31934 \code {\LinkA{readLines}{readLines}}. ! Undefined control sequence. l.31934 \code{\LinkA {readLines}{readLines}}. ! Undefined control sequence. l.31936 If \code {comment.char} occurs (except inside a quoted character ! Undefined control sequence. l.31946 ...ser interrupt every 1000 lines if \code {what} ! Undefined control sequence. l.31949 If \code {file} is a character string and \code{fileEncoding} is ! Undefined control sequence. l.31949 ...e{file} is a character string and \code {fileEncoding} is ! Undefined control sequence. l.31950 ..., or if it is a not-already-open \LinkA {connection}{connection} w... ! Undefined control sequence. l.31951 non-default \code {encoding} argument, the text is converted to UTF-8 ! Undefined control sequence. l.31952 and declared as such (and the \code {encoding} argument to \code{scan} ! Undefined control sequence. l.31952 ...d the \code{encoding} argument to \code {scan} ! Undefined control sequence. l.31953 is ignored). See the examples of \code {\LinkA{readLines}{readLines}}. ! Undefined control sequence. l.31953 ...red). See the examples of \code{\LinkA {readLines}{readLines}}. ! Undefined control sequence. l.31956 ..., with a warning once per call to \code {scan}. Setting ! Undefined control sequence. l.31957 \code {skipNul = TRUE} causes them to be ignored. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31958 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31960 \begin{Value} ! Undefined control sequence. l.31961 if \code {what} is a list, a list of the same length and same names (as ! Undefined control sequence. l.31962 any) as \code {what}. ! Undefined control sequence. l.31964 Otherwise, a vector of the type of \code {what}. ! Undefined control sequence. l.31967 \code {encoding} is \code{"latin1"} or \code{"UTF-8"}. ! Undefined control sequence. l.31967 \code{encoding} is \code {"latin1"} or \code{"UTF-8"}. ! Undefined control sequence. l.31967 ...e{encoding} is \code{"latin1"} or \code {"UTF-8"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31968 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31970 \begin{Note} \relax ! Undefined control sequence. l.31971 The default for \code {multi.line} differs from S. To read one record ! Undefined control sequence. l.31972 per line, use \code {flush = TRUE} and \code{multi.line = FALSE}. ! Undefined control sequence. l.31972 ...line, use \code{flush = TRUE} and \code {multi.line = FALSE}. [310] [43]] ! Undefined control sequence. l.31978 copies.) If you can, specify either \code {n} or \code{nmax} whenever ! Undefined control sequence. l.31978 ...u can, specify either \code{n} or \code {nmax} whenever ! Undefined control sequence. l.31979 inputting a large vector, and \code {nmax} or \code{nlines} when ! Undefined control sequence. l.31979 ... large vector, and \code{nmax} or \code {nlines} when ! Undefined control sequence. l.31982 Using \code {scan} on an open connection to read partial lines can lose ! Undefined control sequence. l.31985 Having \code {nul} bytes in fields (including \samp{\bsl{}0} if ! Undefined control sequence. l.31985 ...e{nul} bytes in fields (including \samp {\bsl{}0} if ! Undefined control sequence. l.31985 ...} bytes in fields (including \samp{\bsl {}0} if ! Undefined control sequence. l.31986 \code {allowEscapes = TRUE}) may lead to interpretation of the ! Undefined control sequence. l.31987 field being terminated at the \code {nul}. They not normally present ! Undefined control sequence. l.31988 in text files -- see \code {\LinkA{readBin}{readBin}}. ! Undefined control sequence. l.31988 in text files -- see \code{\LinkA {readBin}{readBin}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31989 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31991 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31995 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31997 \begin{SeeAlso} \relax ! Undefined control sequence. l.31998 \code {\LinkA{read.table}{read.table}} for more user-friendly reading... ! Undefined control sequence. l.31998 \code{\LinkA {read.table}{read.table}} for more user-friendly reading... ! Undefined control sequence. l.32000 \code {\LinkA{readLines}{readLines}} to read a file a line at a time. ! Undefined control sequence. l.32000 \code{\LinkA {readLines}{readLines}} to read a file a line at a time. ! Undefined control sequence. l.32001 \code {\LinkA{write}{write}}. ! Undefined control sequence. l.32001 \code{\LinkA {write}{write}}. ! Undefined control sequence. l.32003 \code {Quotes} for the details of C-style escape sequences. ! Undefined control sequence. l.32005 \code {\LinkA{readChar}{readChar}} and \code{\LinkA{readBin}{readBin}... ! Undefined control sequence. l.32005 \code{\LinkA {readChar}{readChar}} and \code{\LinkA{readBin}{readBin}... ! Undefined control sequence. l.32005 ...e{\LinkA{readChar}{readChar}} and \code {\LinkA{readBin}{readBin}}... ! Undefined control sequence. l.32005 ...A{readChar}{readChar}} and \code{\LinkA {readBin}{readBin}} to rea... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32008 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32010 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32011 \begin{ExampleCode} ! Undefined control sequence. l.32012 ..."11 13 17", file = "ex.data", sep = "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.32015 scan("ex.data", skip = 1, nlines = 1) # only 1 line after the skippe... ! You can't use `macro parameter character #' in horizontal mode. l.32016 scan("ex.data", what = list("","","")) # flush is F -> read "7" ! You can't use `macro parameter character #' in horizontal mode. l.32018 unlink("ex.data") # tidy up ! You can't use `macro parameter character #' in vertical mode. l.32020 # # "inline" usage ! You can't use `macro parameter character #' in vertical mode. l.32020 ## "inline" usage ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32023 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32024 \end{Examples} ! Undefined control sequence. l.32025 \HeaderA {search}{Give Search Path for R Objects}{search} ! Undefined control sequence. l.32026 \aliasA {.rmpkg}{search}{.rmpkg} ! Undefined control sequence. l.32027 \aliasA {searchpaths}{search}{searchpaths} ! Undefined control sequence. l.32028 \keyword {data}{search} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32030 \begin{Description} \relax ! Undefined control sequence. l.32031 Gives a list of \code {\LinkA{attach}{attach}}ed \emph{packages} ! Undefined control sequence. l.32031 Gives a list of \code{\LinkA {attach}{attach}}ed \emph{packages} ! Undefined control sequence. l.32032 (see \code {\LinkA{library}{library}}), and \R{} objects, usually ! Undefined control sequence. l.32032 (see \code{\LinkA {library}{library}}), and \R{} objects, usually ! Undefined control sequence. l.32032 ...code{\LinkA{library}{library}}), and \R {} objects, usually ! Undefined control sequence. l.32033 \code {\LinkA{data.frame}{data.frame}s}. ! Undefined control sequence. l.32033 \code{\LinkA {data.frame}{data.frame}s}. ! LaTeX Error: \begin{document} ended by \end{Descript Overfull \hbox (32.24495pt too wide) in paragraph at lines 4536--4536 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4538--4538 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4539--4539 [] @texttt if(jvn < 1.8) stop("Java 8 is needed for this package but not avai lable")[] [51ion}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32034 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32036 \begin{Usage} Underfull \hbox (badness 1082) in paragraph at lines 32025--32037 \OT1/cmr/m/n/10 searchGive Search Path for R Ob-jectssearch .rmp-kgsearch.rmpkg search- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32041 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32043 \begin{Value} ! Undefined control sequence. l.32044 A character vector, starting with \code {"\LinkA{.GlobalEnv}{.GlobalE... ! Undefined control sequence. l.32044 ...ter vector, starting with \code{"\LinkA {.GlobalEnv}{.GlobalEnv}"}... ! Undefined control sequence. l.32045 ending with \code {"package:base"} which is \R{}'s \pkg{base} package ! Undefined control sequence. l.32045 ... with \code{"package:base"} which is \R {}'s \pkg{base} package ! Undefined control sequence. l.32045 ...de{"package:base"} which is \R{}'s \pkg {base} package ! Undefined control sequence. l.32048 \code {searchpaths} gives a similar character vector, with the ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32051 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32053 \begin{References} \relax ! Undefined control sequence. l.32056 Wadsworth \& Brooks/Cole. (\code {search}.) ! Undefined control sequence. l.32060 Springer. (\code {searchPaths}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32061 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32063 \begin{SeeAlso} \relax ! Undefined control sequence. l.32064 \code {\LinkA{.packages}{.packages}} to list just the packages on sea... ! Undefined control sequence. l.32064 \code{\LinkA {.packages}{.packages}} to list just the packages on sea... ! Undefined control sequence. l.32066 \code {\LinkA{loadedNamespaces}{loadedNamespaces}} to list loaded nam... ! Undefined control sequence. l.32066 \code{\LinkA {loadedNamespaces}{loadedNamespaces}} to list loaded nam... ! Undefined control sequence. l.32068 \code {\LinkA{attach}{attach}} and \code{\LinkA{detach}{detach}} to c... ! Undefined control sequence. l.32068 \code{\LinkA {attach}{attach}} and \code{\LinkA{detach}{detach}} to c... ! Undefined control sequence. l.32068 \code{\LinkA{attach}{attach}} and \code {\LinkA{detach}{detach}} to c... ! Undefined control sequence. l.32068 ...LinkA{attach}{attach}} and \code{\LinkA {detach}{detach}} to chang... ! Undefined control sequence. l.32069 search path, \code {\LinkA{objects}{objects}} to find \R{} objects in... ! Undefined control sequence. l.32069 search path, \code{\LinkA {objects}{objects}} to find \R{} objects in... ! Undefined control sequence. l.32069 ...de{\LinkA{objects}{objects}} to find \R {} objects in there. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32070 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32072 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32073 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32076 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32077 \end{Examples} ! Undefined control sequence. l.32078 \HeaderA {seek}{Functions to Reposition Connections}{seek} ! Undefined control sequence. l.32079 \aliasA {isSeekable}{seek}{isSeekable} ! Undefined control sequence. l.32080 \methaliasA {seek.connection}{seek}{seek.connection} ! Undefined control sequence. l.32081 \aliasA {truncate}{seek}{truncate} ! Undefined control sequence. l.32082 \methaliasA {truncate.connection}{seek}{truncate.connection} ! Undefined control sequence. l.32083 \keyword {file}{seek} ! Undefined control sequence. l.32084 \keyword {connection}{seek} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32086 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32088 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32090 \begin{Usage} Underfull \hbox (badness 1466) in paragraph at lines 32068--32091 \OT1/cmr/m/n/10 Con-nec-tion-sseek is-Seek-able-seekisSeek-able seek.connection seekseek.connection [311 [44]]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32100 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32102 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32103 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32104 \item[\code{con}] a \LinkA{connection}{connection}. ! Undefined control sequence. l.32104 \item[\code{con}] a \LinkA {connection}{connection}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32105 \item[\code{where}] numeric. A file position (relative to the origin ! Undefined control sequence. l.32106 specified by \code {origin}), or \code{NA}. ! Undefined control sequence. l.32106 specified by \code{origin}), or \code {NA}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32107 \item[\code{rw}] character string. Empty or \code{"read"} or \code{... ! Undefined control sequence. l.32107 ...{rw}] character string. Empty or \code {"read"} or \code{"write"}, ! Undefined control sequence. l.32107 ...tring. Empty or \code{"read"} or \code {"write"}, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32109 \item[\code{origin}] character string. One of \code{"start"}, \code... ! Undefined control sequence. l.32109 ...rigin}] character string. One of \code {"start"}, \code{"current"}, ! Undefined control sequence. l.32109 ...r string. One of \code{"start"}, \code {"current"}, ! Undefined control sequence. l.32110 \code {"end"}: see `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32111 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32112 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32113 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32115 \begin{Details} \relax ! Undefined control sequence. l.32116 \code {seek} with \code{where = NA} returns the current byte offset ! Undefined control sequence. l.32116 \code{seek} with \code {where = NA} returns the current byte offset ! Undefined control sequence. l.32117 ...eginning), and with a non-missing \code {where} ! Undefined control sequence. l.32119 specified position. \code {isSeekable} returns whether the connection ! Undefined control sequence. l.32120 in principle supports \code {seek}: currently only (possibly ! Undefined control sequence. l.32123 \code {where} is stored as a real but should represent an integer: ! Undefined control sequence. l.32125 ...e largest representable number in an \R {} ! Undefined control sequence. l.32126 \code {integer} on 64-bit builds, and on some 32-bit builds. ! Undefined control sequence. l.32129 \R {} keeps separate positions for reading and writing. Which \code{... ! Undefined control sequence. l.32129 ...s for reading and writing. Which \code {seek} ! Undefined control sequence. l.32130 refers to can be set by its \code {rw} argument: the default is the ! Undefined control sequence. l.32138 for modes \code {"r+"} and \code{"r+b"}, otherwise at the end of the ! Undefined control sequence. l.32138 for modes \code{"r+"} and \code {"r+b"}, otherwise at the end of the ! Undefined control sequence. l.32144 \code {gzfile} connections support \code{seek} with a number of ! Undefined control sequence. l.32144 \code{gzfile} connections support \code {seek} with a number of ! Undefined control sequence. l.32146 They do not support \code {origin = "end"}. When writing, seeking is ! Undefined control sequence. l.32150 If \code {seek} is called with a non-\code{NA} value of \code{where}, ! Undefined control sequence. l.32150 If \code{seek} is called with a non-\code {NA} value of \code{where}, ! Undefined control sequence. l.32150 ...led with a non-\code{NA} value of \code {where}, ! Undefined control sequence. l.32153 \code {truncate} truncates a file opened for writing at its current ! Undefined control sequence. l.32154 position. It works only for \code {file} connections, and is not ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32160 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32162 \begin{Value} ! Undefined control sequence. l.32163 \code {seek} returns the current position (before [52any move), as a ! Undefined control sequence. l.32164 ... from the origin, if relevant, or \code {0} if ! Undefined control sequence. l.32166 number in an \R {} \code{integer} on 64-bit builds, and on some 32-bit ! Undefined control sequence. l.32166 number in an \R{} \code {integer} on 64-bit builds, and on some 32-bit ! Undefined control sequence. l.32169 \code {truncate} returns \code{NULL}: it stops with an error if ! Undefined control sequence. l.32169 \code{truncate} returns \code {NULL}: it stops with an error if ! Undefined control sequence. l.32172 \code {isSeekable} returns a logical value, whether the connection ! Undefined control sequence. l.32173 supports \code {seek}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32174 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32176 \begin{Section} {Warning} ! Undefined control sequence. l.32177 Use of \code {seek} on Windows is discouraged. We have found so many ! Undefined control sequence. l.32180 the \R {} developers' time with bug reports on Windows' deficiencies. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32181 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32183 \begin{SeeAlso} \relax ! Undefined control sequence. l.32184 \code {\LinkA{connections}{connections}} ! Undefined control sequence. l.32184 \code{\LinkA {connections}{connections}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32185 \end{SeeAlso} ! Undefined control sequence. l.32186 \HeaderA {seq}{Sequence Generation}{seq} ! Undefined control sequence. l.32187 \methaliasA {seq.default}{seq}{seq.default} ! Undefined control sequence. l.32188 \methaliasA {seq.int}{seq}{seq.int} ! Undefined control sequence. l.32189 \aliasA {seq\_along}{seq}{seq.Rul.along} ! Undefined control sequence. l.32190 \aliasA {seq\_len}{seq}{seq.Rul.len} ! Undefined control sequence. l.32191 \keyword {manip}{seq} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32193 \begin{Description} \relax ! Undefined control sequence. l.32194 Generate regular sequences. \code {seq} is a standard generic with a ! Undefined control sequence. l.32195 default method. \code {seq.int} is a primitive which can be ! Undefined control sequence. l.32196 ...ster but has a few restrictions. \code {seq\_along} [45 and ! Undefined control sequence. l.32197 \code {seq\_len} are very fast primitives for two common cases. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32198 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32200 \begin{Usage} [312]]] [46 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32213 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32215 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32216 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32217 \item[\code{...}] arguments passed to or from methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32218 \item[\code{from, to}] the starting and (maximal) end values of the ! Undefined control sequence. l.32219 sequence. Of length \code {1} unless just \code{from} is supplied as ! Undefined control sequence. l.32219 .... Of length \code{1} unless just \code {from} is supplied as ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32221 \item[\code{by}] number: increment of the sequence. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32222 \item[\code{length.out}] desired length of the sequence. A ! Undefined control sequence. l.32223 non-negative number, which for \code {seq} and \code{seq.int} will be ! Undefined control sequence. l.32223 ... number, which for \code{seq} and \code {seq.int} will be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32225 \item[\code{along.with}] take the length from the length of this arg... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32226 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32227 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32229 \begin{Details} \relax ! Undefined control sequence. l.32230 Numerical inputs should all be \LinkA {finite}{finite} (that is, not ... ! Undefined control sequence. l.32231 \code {\LinkA{NaN}{NaN}} or \code{NA}). ! Undefined control sequence. l.32231 \code{\LinkA {NaN}{NaN}} or \code{NA}). ! Undefined control sequence. l.32231 \code{\LinkA{NaN}{NaN}} or \code {NA}). ! Undefined control sequence. l.32233 ...ation of the unnamed arguments of \code {seq} and ! Undefined control sequence. l.32234 \code {seq.int} is \emph{not} standard, and it is recommended always to ! Undefined control sequence. l.32237 \code {seq} is generic, and only the default method is described here. ! Undefined control sequence. l.32238 ... dispatches on the class of the \strong {first} argument ! Undefined control sequence. l.32241 \code {along.with}: it is much better to use \code{seq\_along} in that ! Undefined control sequence. l.32241 ...g.with}: it is much better to use \code {seq\_along} in that ! Undefined control sequence. l.32244 \code {seq.int} is an \LinkA{internal generic}{internal generic} whic... ! Undefined control sequence. l.32244 \code{seq.int} is an \LinkA {internal generic}{internal generic} whic... ! Undefined control sequence. l.32245 methods for \code {"seq"} based on the class of the first supplied ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32249 \begin{alltt} seq(from, to) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32255 \end{alltt} Underfull \hbox (badness 1231) in paragraph at lines 32248--32256 []\OT1/cmr/m/n/10 Typical us-ages are seq(from, to) seq(from, to, by= ) seq(fro m, to, ! Undefined control sequence. l.32257 ...first form generates the sequence \code {from, from+/-1, ..., to} ! Undefined control sequence. l.32258 (identical to \code {from:to}). ! Undefined control sequence. l.32260 The second form generates \code {from, from+by}, \ldots, up to the ! Undefined control sequence. l.32261 sequence value less than or equal to \code {to}. Specifying \code{to - ! Undefined control sequence. l.32261 ...r equal to \code{to}. Specifying \code {to - ! Undefined control sequence. l.32262 from} and \code {by} of opposite signs is an error. Note that the ! Undefined control sequence. l.32263 ...ed final value can go just beyond \code {to} to allow for ! Undefined control sequence. l.32264 rounding error, but is truncated to \code {to}. (`Just beyond' ! Undefined control sequence. l.32265 is by up to \eqn {10^{-10}}{} times \code{abs(from - to)}.) ! Missing $ inserted. $ l.32265 is by up to \eqn{10^ {-10}}{} times \code{abs(from - to)}.) ! Extra }, or forgotten $. l.32265 is by up to \eqn{10^{-10}} {} times \code{abs(from - to)}.) ! Undefi [53]ned control sequence. l.32265 is by up to \eqn{10^{-10}}{} times \code {abs(from - to)}.) ! Missing $ inserted. $ l.32266 ! Undefined control sequence. l.32267 The third generates a sequence of \code {length.out} equally spaced ! Undefined control sequence. l.32268 values from \code {from} to \code{to}. (\code{length.out} is usually ! Undefined control sequence. l.32268 values from \code{from} to \code {to}. (\code{length.out} is usually ! Undefined control sequence. l.32268 ... from \code{from} to \code{to}. (\code {length.out} is usually ! Undefined control sequence. l.32269 abbreviated to \code {length} or \code{len}, and \code{seq\_len} is much ! Undefined control sequence. l.32269 abbreviated to \code{length} or \code {len}, and \code{seq\_len} is much ! Undefined control sequence. l.32269 ... \code{length} or \code{len}, and \code {seq\_len} is much ! Undefined control sequence. l.32272 ...rm generates the integer sequence \code {1, 2, ..., ! Undefined control sequence. l.32273 length(along.with)}. (\code {along.with} is usually abbreviated to ! Undefined control sequence. l.32274 \code {along}, and \code{seq\_along} is much faster.) ! Undefined control sequence. l.32274 \code{along}, and \code {seq\_along} is much faster.) ! Undefined control sequence. l.32276 ...fifth form generates the sequence \code {1, 2, ..., length(from)} ! Undefined control sequence. l.32277 (as if argument \code {along.with} had been specified), \emph{unless} ! Undefined control sequence. l.32279 \code {1:from} (even for \code{seq(0)} for compatibility with S). ! Undefined control sequence. l.32279 \code{1:from} (even for \code {seq(0)} for compatibility with S). ! Undefined control sequence. l.32280 Using either \code {seq\_along} or \code{seq\_len} is much preferred ! Undefined control sequence. l.32280 Using either \code{seq\_along} or \code {seq\_len} is much preferred [313 [47]] ! Undefined control sequence. l.32283 ...rm generates the integer sequence \code {1, 2, ..., ! Undefined control sequence. l.32284 length.out} unless \code {length.out = 0}, when it generates ! Undefined control sequence. l.32285 \code {integer(0)}. ! Undefined control sequence. l.32287 Very small sequences (with \code {from - to} of the order of \eqn{10^... ! Undefined control sequence. l.32287 ...h \code{from - to} of the order of \eqn {10^{-14}}{} ! Missing $ inserted. $ l.32287 ...ode{from - to} of the order of \eqn{10^ {-14}}{} ! Extra }, or forgotten $. l.32287 ...om - to} of the order of \eqn{10^{-14}} {} ! Undefined control sequence. l.32288 ...e larger of the ends) will return \code {from}. ! Missing $ inserted. $ l.32289 Underfull \hbox (badness 10000) in paragraph at lines 32287--32289 []\OT1/cmr/m/n/10 Very small se-quences (with from - to of the or-der of ! Undefined control sequence. l.32290 For \code {seq} (only), up to two of \code{from}, \code{to} and ! Undefined control sequence. l.32290 For \code{seq} (only), up to two of \code {from}, \code{to} and ! Undefined control sequence. l.32290 ...(only), up to two of \code{from}, \code {to} and ! Undefined control sequence. l.32291 \code {by} can be supplied as complex values provided \code{length.out} ! Undefined control sequence. l.32291 ...pplied as complex values provided \code {length.out} ! Undefined control sequence. l.32292 or \code {along.with} is specified. More generally, the default method ! Undefined control sequence. l.32293 of \code {seq} will handle classed objects with methods for ! Undefined control sequence. l.32294 the \code {Math}, \code{Ops} and \code{Summary} group generics. ! Undefined control sequence. l.32294 the \code{Math}, \code {Ops} and \code{Summary} group generics. ! Undefined control sequence. l.32294 the \code{Math}, \code{Ops} and \code {Summary} group generics. ! Undefined control sequence. l.32296 \code {seq.int}, \code{seq\_along} and \code{seq\_len} are ! Undefined control sequence. l.32296 \code{seq.int}, \code {seq\_along} and \code{seq\_len} are ! Undefined control sequence. l.32296 ...e{seq.int}, \code{seq\_along} and \code {seq\_len} are ! Undefined control sequence. l.32297 \LinkA {primitive}{primitive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32298 \end{Details} ! Missing } inserted. } l.32298 \end{Details} ! Missing } inserted. } l.32298 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32300 \begin{Value} ! Undefined control sequence. l.32301 \code {seq.int} and the default method of \code{seq} for numeric ! Undefined control sequence. l.32301 ...eq.int} and the default method of \code ] {seq} for numeric ! Undefined control sequence. l.32302 arguments return a vector of type \code {"integer"} or \code{"double"}: ! Undefined control sequence. l.32302 ...ector of type \code{"integer"} or \code {"double"}: ! Undefined control sequence. l.32305 \code {seq\_along} and \code{seq\_len} return an integer vector, unless ! Undefined control sequence. l.32305 \code{seq\_along} and \code {seq\_len} return an integer vector, unless ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32307 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32309 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32313 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32315 \begin{SeeAlso} \relax ! Undefined control sequence. l.32316 The methods \code {\LinkA{seq.Date}{seq.Date}} and \code{\LinkA{seq.P... ! Undefined control sequence. l.32316 The methods \code{\LinkA {seq.Date}{seq.Date}} and \code{\LinkA{seq.P... ! Undefined control sequence. l.32316 ...e{\LinkA{seq.Date}{seq.Date}} and \code {\LinkA{seq.POSIXt}{seq.PO... ! Undefined control sequence. l.32316 ...A{seq.Date}{seq.Date}} and \code{\LinkA {seq.POSIXt}{seq.POSIXt}}. ! Undefined control sequence. l.32318 \code {\LinkA{:}{:}}, ! Undefined control sequence. l.32318 \code{\LinkA {:}{:}}, ! Undefined control sequence. l.32319 \code {\LinkA{rep}{rep}}, ! Undefined control sequence. l.32319 \code{\LinkA {rep}{rep}}, ! Undefined control sequence. l.32320 \code {\LinkA{sequence}{sequence}}, ! Undefined control sequence. l.32320 \code{\LinkA {sequence}{sequence}}, ! Undefined control sequence. l.32321 \code {\LinkA{row}{row}}, ! Undefined control sequence. l.32321 \code{\LinkA {row}{row}}, ! Undefined control sequence. l.32322 \code {\LinkA{col}{col}}. ! Undefined control sequence. l.32322 \code{\LinkA {col}{col}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32323 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32325 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32326 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.32328 seq(stats::rnorm(20)) # effectively 'along' ! You can't use `macro parameter character #' in horizontal mode. l.32329 seq(1, 9, by = 2) # matches 'end' ! You can't use `macro parameter character #' in horizontal mode. l.32330 seq(1, 9, by = pi) # stays below 'end' ! You can't use `macro parameter character #' in horizontal mode. l.32333 seq(17) # same as 1:17, or even better seq_len(17) ! Missing $ inserted. $ l.32333 ...17) # same as 1:17, or even better seq_ len(17) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32334 \end{ExampleCode} ! Missing $ inserted. $ l.32334 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32335 \end{Examples} ! Undefined control sequence. l.32336 \HeaderA {seq.Date}{Generate Regular Sequences of Dates}{seq.Date} ! Undefined control sequence. l.32337 \keyword {manip}{seq.Date} ! Undefined control sequence. l.32338 \keyword {chron}{seq.Date} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32340 \begin{Description} \relax ! Undefined control sequence. l.32341 The method for \code {\LinkA{seq}{seq}} for objects of class class ! Undefined control sequence. l.32341 The method for \code{\LinkA {seq}{seq}} for objects of class class ! Undefined control sequence. l.32342 \code {"\LinkA{Date}{Date}"} representing calendar dates. ! Undefined control sequence. l.32342 \code{"\LinkA {Date}{Date}"} representing calendar dates. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32343 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32345 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32350 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32352 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32353 \begin{ldescription} [54 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32354 \item[\code{from}] starting date. Required ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32355 \item[\code{to}] end date. Optional. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32356 \item[\code{by}] increment of the sequence. Optional. See `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32357 \item[\code{length.out}] integer, optional. Desired length of the s... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32358 \item[\code{along.with}] take the length from the length of this arg... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32359 \item[\code{...}] arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32360 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32361 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32363 \begin{Details} \relax ! Undefined control sequence. l.32364 \code {by} can be specified in several ways. ! Undefined control sequence. l.32368 \item A object of class \code {\LinkA{difftime}{difftime}} ! Undefined control sequence. l.32368 \item A object of class \code{\LinkA {difftime}{difftime}} ! Undefined control sequence. l.32369 ...aracter string, containing one of \code {"day"}, ! Undefined control sequence. l.32370 \code {"week"}, \code{"month"}, \code{"quarter"} or \code{"year"}. ! Undefined control sequence. l.32370 \code{"week"}, \code {"month"}, \code{"quarter"} or \code{"year"}. ! Undefined control sequence. l.32370 \code{"week"}, \code{"month"}, \code {"quarter"} or \code{"year"}. ! Undefined control sequence. l.32370 ...ode{"month"}, \code{"quarter"} or \code [48 {"year"}. ! Undefined control sequence. l.32372 and a space, or followed by \code {"s"}. ! Undefined control sequence. l.32374 See \code {\LinkA{seq.POSIXt}{seq.POSIXt}} for the details of \code{"... ! Undefined control sequence. l.32374 See \code{\LinkA {seq.POSIXt}{seq.POSIXt}} for the details of \code{"... ! Undefined control sequence. l.32374 ...}{seq.POSIXt}} for the details of \code {"month"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32378 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32380 \begin{Value} ! Undefined control sequence. l.32381 A vector of class \code {"Date"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32382 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32384 \begin{SeeAlso} \relax ! Undefined control sequence. l.32385 \code {\LinkA{Date}{Date}} ! Undefined control sequence. l.32385 \code{\LinkA {Date}{Date}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32386 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32388 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32389 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.32390 # # first days of years ! You can't use `macro parameter character #' in horizontal mode. l.32390 ## first days of years ! You can't use `macro parameter character #' in horizontal mode. l.32392 # # by month ! You can't use `macro parameter character #' in horizontal mode. l.32392 ## by month ! You can't use `macro parameter character #' in horizontal mode. l.32394 # # quarters ! You can't use `macro parameter character #' in horizontal mode. l.32394 ## quarters Underfull \hbox (badness 6944) in paragraph at lines 32381--32396 \OT1/cmr/m/n/10 A vec-tor of class "Date". Date-Date first days of Underfull \hbox (badness 1062) in paragraph at lines 32381--32396 \OT1/cmr/m/n/10 years seq(as.Date("1910/1/1"), as.Date("1999/1/1"), "years") b y month Underfull \hbox (badness 3482) in paragraph at lines 32381--32396 \OT1/cmr/m/n/10 seq(as.Date("2000/1/1"), by = "month", length.out = 12) quar-t ers ! You can't use `macro parameter character #' in vertical mode. l.32397 # # find all 7th of the month between two dates, the last bei]ng a 7th. ! You can't use `macro parameter character #' in vertical mode. l.32397 ## find all 7th of the month between two dates, the last being a 7th. ! Misplaced alignment tab character &. l.32401 rev(ll[ll > st & ll < en]) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32402 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32403 \end{Examples} ! Undefined control sequence. l.32404 \HeaderA {seq.POSIXt}{Generate Regular Sequences of Times}{seq.POSIXt} ! Undefined control sequence. l.32405 \keyword {manip}{seq.POSIXt} ! Undefined control sequence. l.32406 \keyword {chron}{seq.POSIXt} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32408 \begin{Description} \relax ! Undefined control sequence. l.32409 The method for \code {\LinkA{seq}{seq}} for date-time classes. ! Undefined control sequence. l.32409 The method for \code{\LinkA {seq}{seq}} for date-time classes. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32410 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32412 \begin{Usage} [314]] [49 Underfull \hbox (badness 3826) in paragraph at lines 4914--4917 []@textrm Some (but not all) ex-ten-sions are listed at [][]@texttt https://gc c.gnu.org/onlinedocs/ Underfull \hbox (badness 10000) in paragraph at lines 4914--4917 @texttt gcc/C-Extensions.html[][][] @textrm and [][]@texttt https://gcc.gnu.or g/onlinedocs/gcc/C_002b_ [55 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32417 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32419 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32420 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32421 \item[\code{from}] starting date. Required. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32422 \item[\code{to}] end date. Optional. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32423 \item[\code{by}] increment of the sequence. Optional. See `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32424 \item[\code{length.out}] integer, optional. Desired length of the s... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32425 \item[\code{along.with}] take the length from the length of this arg... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32426 \item[\code{...}] arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32427 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32428 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32430 \begin{Details} \relax ! Undefined control sequence. l.32431 \code {by} can be specified in several ways. ! Undefined control] Chapter 11 [50 sequence. l.32435 \item A object of class \code {\LinkA{difftime}{difftime}} ! Undefined control sequence. l.32435 \item A object of class \code{\LinkA {difftime}{difftime}} ! Undefined control sequence. l.32436 ...aracter string, containing one of \code {"sec"}, ! Undefined control sequence. l.32437 \code {"min"}, \code{"hour"}, \code{"day"}, \code{"DSTday"}, ! Undefined control sequence. l.32437 \code{"min"}, \code {"hour"}, \code{"day"}, \code{"DSTday"}, ! Undefined control sequence. l.32437 \code{"min"}, \code{"hour"}, \code {"day"}, \code{"DSTday"}, ! Undefined control sequence. l.32437 ...n"}, \code{"hour"}, \code{"day"}, \code {"DSTday"}, ! Undefined control sequence. l.32438 \code {"week"}, \code{"month"}, \code{"quarter"} or \code{"year"}. ! Undefined control sequence. l.32438 \code{"week"}, \code {"month"}, \code{"quarter"} or \code{"year"}. ! Undefined control sequence. l.32438 \code{"week"}, \code{"month"}, \code {"quarter"} or \code{"year"}. ! Undefined control sequence. l.32438 ...ode{"month"}, \code{"quarter"} or \code {"year"}. ! Undefined control sequence. l.32440 and a space, or followed by \code {"s"}. ! Undefined control sequence. l.32444 The difference between \code {"day"} and \code{"DSTday"} is that the ! Undefined control sequence. l.32444 ...fference between \code{"day"} and \code {"DSTday"} is that the ! Undefined control sequence. l.32446 the same clock time each day. (\code {"week"} ignores DST (it is a ! Undefined control sequence. l.32447 period of 144 hours), but \code {"7 DSTdays"}) can be used as an ! Undefined control sequence. l.32448 alternative. \code {"month"} and \code{"year"} allow for DST.) ! Undefined control sequence. l.32448 alternative. \code{"month"} and \code {"year"} allow for DST.) ! Undefined control sequence. l.32450 The \LinkA {time zone}{time zone} of the result is taken from \code{f... ! Undefined control sequence. l.32450 ...zone} of the result is taken from \code {from}: remember ! Undefined control sequence. l.32454 Using \code {"month"} first advances the month without changing the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32457 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32459 \begin{Value} ! Undefined control sequence. l.32460 A vector of class \code {"POSIXct"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32461 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32463 \begin{Se]eAlso} \relax ! Undefined control sequence. l.32464 \code {\LinkA{DateTimeClasses}{DateTimeClasses}} ! Undefined control sequence. l.32464 \code{\LinkA {DateTimeClasses}{DateTimeClasses}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32465 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32467 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32468 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.32469 # # first days of years ! You can't use `macro parameter character #' in horizontal mode. l.32469 ## first days of years ! You can't use `macro parameter character #' in horizontal mode. l.32471 # # by month ! You can't use `macro parameter character #' in horizontal mode. l.32471 ## by month ! You can't use `macro parameter character #' in horizontal mode. l.32474 # # quarters ! You can't use `macro parameter character #' in horizontal mode. l.32474 ## quarters ! You can't use `macro parameter character #' in horizontal mode. l.32475 ...), ISOdate(2000,1,1), by = "quarter") # or "3 months" ! You can't use `macro parameter character #' in horizontal mode. l.32476 # # days vs DSTdays: use c() to lose the time zone. ! You can't use `macro parameter character #' in horizontal mode. l.32476 ## days vs DSTdays: use c() to lose the time zone. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32480 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32481 \end{Examples} ! Undefined control sequence. l.32482 \HeaderA {sequence}{Create A Vector of Sequences}{sequence} ! Undefined control sequence. l.32483 \keyword {manip}{sequence} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32485 \begin{Description} \relax ! Undefined control sequence. l.32486 For each element of \code {nvec} the sequence \code{\LinkA{seq\_len}{... ! Undefined control sequence. l.32486 ...ement of \code{nvec} the sequence \code {\LinkA{seq\_len}{seq.Rul.... ! Undefined control sequence. l.32486 ...f \code{nvec} the sequence \code{\LinkA {seq\_len}{seq.Rul.len}(nv... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32488 \end{Description} ] ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32490 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32494 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32496 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32497 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32498 \item[\code{nvec}] a non-negative integer vector each element of which ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32500 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32501 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32503 \begin{Details} \relax ! Undefined control sequence. l.32504 Earlier versions of \code {sequence} used to work for 0 or negative i... ! Undefined control sequence. l.32505 \code {seq(x) == 1:x}. ! Undefined control sequence. l.32507 Note that \code {sequence <- function(nvec) unlist(lapply(nvec, seq\_... ! Undefined control sequence. l.32508 ...verence to the very early history of \R {}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32509 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32511 \begin{SeeAlso} \relax ! Undefined control sequence. l.32512 \code {\LinkA{gl}{gl}}, \code{\LinkA{seq}{seq}}, \code{\LinkA{rep}{re... ! Undefined control sequence. l.32512 \code{\LinkA {gl}{gl}}, \code{\LinkA{seq}{seq}}, \code{\LinkA{rep}{re... ! Undefined control sequence. l.32512 \code{\LinkA{gl}{gl}}, \code {\LinkA{seq}{seq}}, \code{\LinkA{rep}{re... ! Undefined control sequence. l.32512 \code{\LinkA{gl}{gl}}, \code{\LinkA {seq}{seq}} [56, \code{\LinkA{rep}{re... ! Undefined control sequence. l.32512 ...l}{gl}}, \code{\LinkA{seq}{seq}}, \code {\LinkA{rep}{rep}}. ! Undefined control sequence. l.32512 ..., \code{\LinkA{seq}{seq}}, \code{\LinkA {rep}{rep}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32513 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32515 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32516 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.32517 sequence(c(3, 2)) # the concatenated sequences 1:3 and 1:2. ! You can't use `macro parameter character #' in horizontal mode. l.32518 # > [1] 1 2 3 1 2 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32519 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32520 \end{Examples} ! Undefined control sequence. l.32521 \HeaderA {serialize}{Simple Serialization Interface}{serialize} ! Undefined control sequence. l.32522 \aliasA {unserialize}{serialize}{unserialize} ! Undefined control sequence. l.32523 \keyword {file}{serialize} ! Undefined control sequence. l.32524 \keyword {connection}{serialize} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32526 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32528 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32530 \begin{Usage} [315 [51]]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32537 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32539 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32540 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32541 \item[\code{object}] \R{} object to serialize. ! Undefined control sequence. l.32541 \item[\code{object}] \R {} object to serialize. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32542 \item[\code{connection}] an open \LinkA{connection}{connection} or (... ! Undefined control sequence. l.32542 \item[\code{connection}] an open \LinkA {connection}{connection} or (... ! Undefined control sequence. l.32542 ...A{connection}{connection} or (for \code {serialize}) ! Undefined control sequence. l.32543 \code {NULL} or (for \code{unserialize}) a raw vector ! Undefined control sequence. l.32543 \code{NULL} or (for \code {unserialize}) a raw vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32545 \item[\code{ascii}] a logical. If \code{TRUE} or \code{NA}, an ASCII ! Undefined control sequence. l.32545 \item[\code{ascii}] a logical. If \code {TRUE} or \code{NA}, an ASCII ! Undefined control sequence. l.32545 ...i}] a logical. If \code{TRUE} or \code {NA}, an ASCII ! Undefined control sequence. l.32547 ...also the comments in the help for \code {\LinkA{save}{save}}. ! Undefined control sequence. l.32547 ...e comments in the help for \code{\LinkA {save}{save}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32548 \item[\code{xdr}] a logical: if a binary representation is used, sho... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32550 \item[\code{version}] the workspace format version to use. \code{NULL} ! Undefined control sequence. l.32550 ...workspace format version to use. \code {NULL} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32553 \item[\code{refhook}] a hook function for handling reference objects. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32554 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32555 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32557 \begin{Details} \relax ! Undefined control sequence. l.32558 The function \code {serialize} serializes \code{object} to the specified ! Undefined control sequence. l.32558 ...ction \code{serialize} serializes \code {object} to the specified ! Undefined control sequence. l.32559 connection. If \code {connection} is \code{NULL} then \code{object} is ! Undefined control sequence. l.32559 connection. If \code{connection} is \code {NULL} then \code{object} is ! Undefined control sequence. l.32559 ...e{connection} is \code{NULL} then \code {object} is ! Undefined control sequence. l.32561 \code {serialize}. ! Undefined control sequence. l.32564 across separate calls to \code {serialize}. ! Undefined control sequence. l.32566 \code {unserialize} reads an object (as written by \code{serialize}) ! Undefined control sequence. l.32566 ...e} reads an object (as written by \code {serialize}) ! Undefined control sequence. l.32567 from \code {connection} or a raw vector. ! Undefined control sequence. l.32569 The \code {refhook} functions can be used to customize handling of ! Undefined control sequence. l.32572 environments and \code {.GlobalEnv}). The hook function for ! Undefined control sequence. l.32573 \code {serialize} should return a character vector for references it ! Undefined control sequence. l.32574 ...andle; otherwise it should return \code {NULL}. The hook for ! Undefined control sequence. l.32575 \code {unserialize} will be called with character vectors supplied to ! Undefined control sequence. l.32576 \code {serialize} and should return an appropriate object. ! Undefined control sequence. l.32578 ... connection, the default value of \code {ascii} is set ! Undefined control sequence. l.32579 to \code {TRUE}: only ASCII representations can be written to text-mode ! Undefined control sequence. l.32580 connections and attempting to use \code {ascii = FALSE} will throw an ! Undefined control sequence. l.32584 line contains a single character: \code {X} for binary serialization ! Undefined control sequence. l.32585 and \code {A} for ASCII serialization, followed by a new line. (The ! Undefined control s [52equence. l.32586 ...used is identical to that used by \code {\LinkA{readRDS}{readRDS}}.) ! Undefined control sequence. l.32586 ... identical to that used by \code{\LinkA {readRDS}{readRDS}}.) ! Undefined control sequence. l.32588 ...in current use are little-endian, \code {xdr = ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32594 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32596 \begin{Value} ! Undefined control sequence. l.32597 For \code {serialize}, \code{NULL} unless \code{connection = NULL}, when ! Undefined control sequence. l.32597 For \code{serialize}, \code {NULL} unless \code{connection = NULL}, when ! Undefined control sequence. l.32597 ...de{serialize}, \code{NULL} unless \code {connection = NULL}, when ! Undefined control sequence. l.32600 For \code {unserialize} an \R{} object. ! Undefined control sequence. l.32600 For \code{unserialize} an \R {} object. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32601 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32603 \begin{Section} {Warning} ! Undefined control sequence. l.32604 ...ve provided a stable interface since \R {} 2.4.0 (when ! Undefined control sequence. l.32607 versions of \R {}, so this interface should not be used for long-term ! Undefined control sequence. l.32608 storage of \R {} objects. [316 [57]]] ! Undefined control sequence. l.32610 ...atforms a raw vector is limited to \eqn {2^{31} - 1}{} bytes, but ... ! Missing $ inserted. $ l.32610 ...orms a raw vector is limited to \eqn{2^ {31} - 1}{} bytes, but \R{... ! Extra }, or forgotten $. l.32610 ...w vector is limited to \eqn{2^{31} - 1} {} bytes, but \R{} objects... ! Undefined control sequence. l.32610 ...ted to \eqn{2^{31} - 1}{} bytes, but \R {} objects can exceed this... ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32612 \end{Section} ! Missing $ inserted. $ l.32612 \end{Section} ! Missing } inserted. } l.32612 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32614 \begin{SeeAlso} \relax ! Undefined control sequence. l.32615 \code {\LinkA{saveRDS}{saveRDS}} for a more convenient interface to s... ! Undefined control sequence. l.32615 \code{\LinkA {saveRDS}{saveRDS}} for a more convenient interface to s... Underfull \hbox (badness 10000) in paragraph at lines 32610--32617 []\OT1/cmr/m/n/10 On 32-bit plat-forms a raw vec-tor is lim-ited to 2$[] \OMS/c msy/m/n/10 ^^@ Overfull \hbox (59.16486pt too wide) in paragraph at lines 32610--32617 \OT1/cmr/m/n/10 1[]\OML/cmm/m/it/10 bytes; but[]objectscanexceedthisandtheirser ializationswillnormallybelargerthantheobjects:$ ! Undefined control sequence. l.32618 \code {\LinkA{save}{save}} and \code{\LinkA{load}{load}} to serialize... ! Undefined control sequence. l.32618 \code{\LinkA {save}{save}} and \code{\LinkA{load}{load}} to serialize... ! Undefined control sequence. l.32618 \code{\LinkA{save}{save}} and \code {\LinkA{load}{load}} to serialize... ! Undefined control sequence. l.32618 \code{\LinkA{save}{save}} and \code{\LinkA {load}{load}} to serialize... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32622 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32624 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32625 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.32629 # # see also the examples for saveRDS ! You can't use `macro parameter character #' in vertical mode. l.32629 ## see also the examples for saveRDS ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32630 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32631 \end{Examples} ! Undefined control sequence. l.32632 \HeaderA {sets}{Set Operations}{sets} ! Undefined control sequence. l.32633 \aliasA {intersect}{sets}{intersect} ! Undefined control sequence. l.32634 \aliasA {intersection}{sets}{intersection} ! Undefined control sequence. l.32635 \aliasA {is.element}{sets}{is.element} ! Undefined control sequence. l.32636 \aliasA {setdiff}{sets}{setdiff} ! Undefined control sequence. l.32637 \aliasA {setequal}{sets}{setequal} ! Undefined control sequence. l.32638 \aliasA {union}{sets}{union} ! Undefined control sequence. l.32639 \keyword {misc}{sets} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32641 \begin{Description} \relax ! Undefined control sequence. l.32642 Performs \bold {set} union, intersection, (asymmetric!) difference, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32644 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32646 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32655 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32657 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32658 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32659 \item[\code{x, y, el, set}] vectors (of the same mode) containing a ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32661 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32662 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32664 \begin{Details} \relax ! Undefined control sequence. l.32665 Each of \code {union}, \code{intersect}, \code{setdiff} and ! Undefined control sequence. l.32665 Each of \code{union}, \code {intersect}, \code{setdiff} and ! Undefined control sequence. l.32665 ...f \code{union}, \code{intersect}, \code {setdiff} and ! Undefined control sequence. l.32666 \code {setequal} will discard any duplicated values in the arguments, ! Undefined control sequence. l.32667 and they apply \code {\LinkA{as.vector}{as.vector}} to their argument... ! Undefined control sequence. l.32667 and they apply \code{\LinkA {as.vector}{as.vector}} to their argument... ! Undefined control sequence. l.32670 \code {is.element(x, y)} is identical to \code{x \%in\% y}. ! Undefined control sequence. l.32670 ...is.element(x, y)} is identical to \code {x \%in\% y}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32671 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32673 \begin{Value} ! Undefined control sequence. l.32674 A vector of the same \code {\LinkA{mode}{mode}} as \code{x} or \code{... ! Undefined control sequence. l.32674 A vector of the same \code{\LinkA {mode}{mode}} as \code{x} or \code{... ! Undefined control sequence. l.32674 ...same \code{\LinkA{mode}{mode}} as \code {x} or \code{y} for ! Undefined control sequence. l.32674 ...LinkA{mode}{mode}} as \code{x} or \code {y} for ! Undefined control sequence. l.32675 \code {setdiff} and \code{intersect}, respectively, and ! Undefined control sequence. l.32675 \code{setdiff} and \code {intersect}, respectively, and ! Undefined control sequence. l.32676 of a common mode for \code {union}. ! Undefined control sequence. l.32678 A logical scalar for \code {setequal} and a logical of the same ! Undefined control sequence. l.32679 length as \code {x} for \code{is.element}. ! Undefined control sequence. l.32679 length as \code{x} for \code {is.element}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32680 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32682 \begin{SeeAlso} \relax ! Undefined control sequence. l.32683 \code {\LinkA{\Rpercent{}in\Rpercent{}}{.Rpcent.in.Rpcent.}} ! Undefined control sequence. l.32683 \code{\LinkA {\Rpercent{}in\Rpercent{}}{.Rpcent.in.Rpcent.}} ! Undefined control sequence. l.32683 \code{\LinkA{\Rpercent {}in\Rpercent{}}{.Rpcent.in.Rpcent.}} ! Undefined control sequence. l.32683 \code{ [53\LinkA{\Rpercent{}in\Rpercent {}}{.Rpcent.in.Rpcent.}} ! Undefined control sequence. l.32685 `\LinkA {plotmath}{plotmath}' for the use of \code{union} and ! Undefined control sequence. l.32685 ...otmath}{plotmath}' for the use of \code {union} and ! Undefined control sequence. l.32686 \code {intersect} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32687 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32689 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32690 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.32699 # # True for all possible x & y : ! You can't use `macro parameter character #' in vertical mode. l.32699 ## True for all possible x & y : ! Misplaced alignment tab character &. l.32699 ## True for all possible x & y : ! You can't use `macro parameter character #' in horizontal mode. l.32703 is.element(x, y) # length 10 ! You can't use `macro parameter character #' in horizontal mode. l.32704 is.element(y, x) # length 8 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32705 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32706 \end{Examples} ! Undefined control sequence. l.32707 \HeaderA {setTimeLimit}{Set CPU and/or Elapsed Time Limits}{setTimeLi... ! Undefined control sequence. l.32708 \aliasA {setSessionTimeLimit}{setTimeLimit}{setSessionTimeLimit} ! Undefined control sequence. l.32709 \keyword {utilities}{setTimeLimit} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32711 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32714 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32716 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32722 \end{Usage} [58 ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32724 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32725 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32726 \item[\code{cpu, elapsed}] double (of length one). Set a limit on ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32728 \item[\code{transient}] logical. If \code{TRUE}, the limits apply o... ! Undefined control sequence. l.32728 \item[\code{transient}] logical. If \code {TRUE}, the limits apply o... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32730 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32731 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32733 \begin{Details} \relax ! Undefined control sequence. l.32734 \code {setTimeLimit} sets limits which apply to each top-level ! Undefined control sequence. l.32738 (unless \code {transient = TRUE}) to subsequent top-level computations. [317]]] ! Undefined control sequence. l.32740 \code {setSessionTimeLimit} sets limits for the rest of the ! Undefined control sequence. l.32741 ...n limit is reached it is reset to \code {Inf}. ! Undefined control sequence. l.32747 This will happen frequently in \R {} code and during \code{\LinkA{Sys... ! Undefined control sequence. l.32747 ...requently in \R{} code and during \code {\LinkA{Sys.sleep}{Sys.sle... ! Undefined control sequence. l.32747 ...ly in \R{} code and during \code{\LinkA {Sys.sleep}{Sys.sleep}}, ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32753 \end{Details} ! Undefined control sequence. l.32754 \HeaderA {showConnections}{Display Connections}{showConnections} ! Undefined control sequence. l.32755 \aliasA {closeAllConnections}{showConnections}{closeAllConnections} ! Undefined control sequence. l.32756 \aliasA {getAllConnections}{showConnections}{getAllConnections} ! Undefined control sequence. l.32757 \aliasA {getConnection}{showConnections}{getConnection} ! Undefined control sequence. l.32758 \aliasA {isatty}{showConnections}{isatty} ! Undefined control sequence. l.32759 \aliasA {stderr}{showConnections}{stderr} ! Undefined control sequence. l.32760 \aliasA {stdin}{showConnections}{stdin} ! Undefined control sequence. l.32761 \aliasA {stdout}{showConnections}{stdout} ! Undefined control sequence. l.32762 \keyword {connection}{showConnections} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32764 \begin{Description} \relax ! Undefined control sequence. l.32765 Display aspects of \LinkA {connections}{connections}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32766 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32768 \begin{Usage} Underfull \hbox (badness 1436) in paragraph at lines 32751--32769 \OT1/cmr/m/n/10 Con-nec-tion-sshow-Con-nec-tion-scloseAll-Con-nec-tions getAll- Con-nec-tion-sshow-Con- Underfull \hbox (badness 1377) in paragraph at lines 32751--32769 \OT1/cmr/m/n/10 tyshow-Con-nec-tion-sisatty stderrshow-Con-nec-tion-sst-derr st din-show-Con-nec-tion- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32780 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32782 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [59 l.32783 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32784 \item[\code{all}] logical: if true all connections, including closed... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32788 \item[\code{what}] integer: a row number of the table given by ! Undefined control sequence. l.32789 \code {showConnections}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32791 \item[\code{con}] a connection. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32792 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32793 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32795 \begin{Details} \relax ! Undefined control sequence. l.32796 \code {stdin()}, \code{stdout()} and \code{stderr()} are standard ! Undefined control sequence. l.32796 \code{stdin()}, \code {stdout()} and \code{stderr()} are standard ! Undefined control sequence. l.32796 \code{stdin()}, \code{stdout()} and \code {stderr()} are standard ! Undefined control sequence. l.32799 connections of class \code {"terminal"} which cannot be opened or ! Undefined control sequence. l.32801 The \code {stdout()} and \code{stderr()} connections can be ! Undefined control sequence. l.32801 The \code{stdout()} and \code {stderr()} connections can be ! Undefined control sequence. l.32802 re-directed by \code {\LinkA{sink}{sink}} (and in some circumstances the ! Undefined control sequence. l.32802 re-directed by \code{\LinkA {sink}{sink}} (and in some circumstances the ! Undefined control sequence. l.32803 output from \code {stdout()} can be split: see the help page). ! Undefined control sequence. l.32805 The encoding for \code {\LinkA{stdin}{stdin}()} when redirected can ! Undefined control sequence. l.32805 The encoding for \code{\LinkA {stdin}{stdin}()} when redirected can ! Undefined control sequence. l.32806 be set by the command-line flag \option {--encoding}. ! Undefined control sequence. l.32808 \code {showConnections} returns a matrix of information. If a ! Undefined control sequence. l.32809 ...bject has been lost or forgotten, \code {getConnection} ! Undefined control sequence. l.32812 for example. However, if there is no \R {} level object referring to... ! Undefined control sequence. l.32814 collection (except for \code {\LinkA{gzcon}{gzcon}} connections). ! Undefined control sequence. l.32814 collection (except for \code{\LinkA {gzcon}{gzcon}} connections). ! Undefined control sequence. l.32816 \code {closeAllConnections} closes (and destroys) all user ! Undefined control sequence. l.32817 connections, restoring all \code {\LinkA{sink}{sink}} diversions as i... ! Undefined control sequence. l.32817 connections, restoring all \code{\LinkA {sink}{sink}} diversions as i... ! Undefined control sequence. l.32820 \code {isatty} returns true if the connection is one of the class ! Undefined control sequence. l.32821 \code {"terminal"} connections and it is apparently connected to a ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32824 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32826 \begin{Value} ! Undefined control sequence. l.32827 \code {stdin()}, \code{stdout()} and \code{stderr()} return connection ! Undefined control sequence. l.32827 \code{stdin()}, \code {stdout()} and \code{stderr()} return connection ! Undefined control sequence. l.32827 \code{stdin()}, \code{stdout()} and \code {stderr()} return connection [318 [54]]] ! Undefined control sequence. l.32830 \code {showConnections} returns a character matrix of information with ! Undefined control sequence. l.32833 \code {getConnection} returns a connection object, or \code{NULL}. ! Undefined control sequence. l.32833 ...} returns a connection object, or \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32834 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32836 \begin{Note} \relax ! Undefined control sequence. l.32837 \code {stdin()} refers to the `console' and not to the C-level ! Undefined control sequence. l.32838 \file {stdin} of the process. The distinction matters in GUI consoles ! Undefined control sequence. l.32839 (which may not have an active \file {stdin}, and if they do it may not ! Undefined control sequence. l.32841 ...access to the C-level file stream \file {stdin}, use ! Undefined control sequence. l.32842 \code {\LinkA{file}{file}("stdin")}. ! Undefined control sequence. l.32842 \code{\LinkA {file}{file}("stdin")}. ! Undefined control sequence. l.32844 When \R {} is reading a script from a file, the \emph{file} is the ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32847 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32849 \begin{SeeAlso} \relax ! Undefined control sequence. l.32850 \code {\LinkA{connections}{connections}} ! Undefined control sequence. l.32850 \code{\LinkA {connections}{connections}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32851 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32853 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32854 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.32856 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.32856 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.32858 # oops, I forgot to record that one ! You can't use `macro parameter character #' in horizontal mode. l.32860 # class description mode text isopen can read can write ! You can't use `macro parameter character #' in horizontal mode. l.32861 # 3 "letters" "textConnection" "r" "text" "opened" "yes" "no" ! You can't use `macro parameter character #' in vertical mode. l.32864 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.32864 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32867 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32868 \end{Examples} ! Undefined control sequence. l.32869 \HeaderA {shQuote}{Quote Strings for Use in OS Shells}{shQuote} ! Undefined control sequence. l.32870 \keyword {utilities}{shQuote} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32872 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32874 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32876 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32880 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32882 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32883 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32884 \item[\code{string}] a character vector, usually of length one. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32885 \item[\code{type}] character: the type of shell quoting. Partial ma... ! Undefined control sequence. l.32886 supported. \code {"cmd"} and \code{"cmd2"} refer to the Windows shell. ! Undefined control sequence. l.32886 supported. \code{"cmd"} and \code {"cmd2"} refer to the Windows shell. ! Undefined control sequence. l.32887 \code {"cmd"} is the default under Windows. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. [60 ... l.32888 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32889 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32891 \begin{Details} \relax ! Undefined control sequence. l.32893 the Bourne shell \code {sh}. If the string does not contain single ! Undefined control sequence. l.32898 ...f quoting is also appropriate for \code {bash}, \code{ksh} and ! Undefined control sequence. l.32898 ...also appropriate for \code{bash}, \code {ksh} and ! Undefined control sequence. l.32899 \code {zsh}. ! Undefined control sequence. l.32901 ...pe of quoting is for the C-shell (\code {csh} and ! Undefined control sequence. l.32902 \code {tcsh}). Once again, if the string does not contain single ! Undefined control sequence. l.32913 \url {https://msdn.microsoft.com/library/ms880421}. It may depend on ! Undefined control sequence. l.32915 documentation. The \code {type = "cmd"} quoting surrounds the string ! Undefined control sequence. l.32918 \code {shQuote} safe for use with many applications when used with ! Undefined control sequence. l.32919 \code {\LinkA{system}{system}} or \code{\LinkA{system2}{system2}}. T... ! Undefined control sequence. l.32919 \code{\LinkA {system}{system}} or \code{\LinkA{system2}{system2}}. T... ! Undefined control sequence. l.32919 \code{\LinkA{system}{system}} or \code {\LinkA{system2}{system2}}. T... ! Undefined control sequence. l.32919 ...\LinkA{system}{system}} or \code{\LinkA {system2}{system2}}. The ... ! Undefined control sequence. l.32920 \command {cmd.exe} shell (used by default with \code{\LinkA{shell}{sh... ! Undefined control sequence. l.32920 ....exe} shell (used by default with \code {\LinkA{shell}{shell}}) ! Undefined control sequence. l.32920 ...hell (used by default with \code{\LinkA {shell}{shell}}) ! Undefined control sequence. l.32921 uses \code {type = "cmd2"} quoting: special characters are prefixed ! Undefined control sequence. l.32922 with \code {"\textasciicircum{}"}. In some cases, two types of quoti... ! Undefined control sequence. l.32923 ...rst for the application, and then \code {type = "cmd2"} ! Undefined control sequence. l.32924 for \command {cmd.exe}. See the examples below. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32925 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32927 \begin{References} \relax ! Undefined control sequence. l.32931 Discussion in \Rhref ] {https://bugs.R-project.org/bugzilla3/show_bug.c... ! Missing $ inserted. $ l.32931 ...ps://bugs.R-project.org/bugzilla3/show_ bug.cgi?id=16636}{PR\#16636}. ! Extra }, or forgotten $. l.32931 ...ct.org/bugzilla3/show_bug.cgi?id=16636} {PR\#16636}. ! Missing $ inserted. $ l.32932 Underfull \hbox (badness 10000) in paragraph at lines 32931--32932 []\OT1/cmr/m/n/10 Discussion in https://bugs.R-project.org/bugzilla3/show$[]\OM L/cmm/m/it/10 ug:cgi\OT1/cmr/m/n/10 ?\OML/cmm/m/it/10 id \OT1/cmr/m/n/10 = [319 [55]] ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32935 \end{References} ! Missing } inserted. } l.32935 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32937 \begin{SeeAlso} \relax ! Undefined control sequence. l.32938 \LinkA {Quotes}{Quotes} for quoting \R{} code. ! Undefined control sequence. l.32938 \LinkA{Quotes}{Quotes} for quoting \R {} code. ! Undefined control sequence. l.32940 \code {\LinkA{sQuote}{sQuote}} for quoting English text. ! Undefined control sequence. l.32940 \code{\LinkA {sQuote}{sQuote}} for quoting English text. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32941 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32943 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32944 \begin{ExampleCode} ! Undefined control sequence. l.32946 cat(shQuote(test), "\n ") ! You can't use `macro parameter character #' in math mode. l.32947 # # Not run: system(paste("echo", shQuote(test))) ! You can't use `macro parameter character #' in math mode. l.32947 ## Not run: system(paste("echo", shQuote(test))) ! Undefined control sequence. l.32949 cat(shQuote(test), "\n ") ! Missing $ inserted. $ l.32950 ! Undefined control sequence. l.32951 ...("use the", sQuote("-c"), "switch\nlike this") ! Undefined control sequence. l.32952 cat(shQuote(tryit), "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.32953 # # Not run: system(paste("echo", shQuote(tryit))) ! You can't use `macro parameter character #' in horizontal mode. l.32953 ## Not run: system(paste("echo", shQuote(tryit))) ! Undefined control sequence. l.32954 cat(shQuote(tryit, type = "csh"), "\n ") ! You can't use `macro parameter character #' in vertical mode. l.32956 # # Windows-only example, assuming cmd.exe: ! You can't use `macro parameter character #' in vertical mode. l.32956 ## Windows-only example, assuming cmd.exe: ! You can't use `macro parameter character #' in horizontal mode. l.32958 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.32958 ## Not run: ! You can't use `macro parameter character #' in vertical mode. l.32963 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.32963 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32964 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32965 \end{Examples} ! Undefined control sequence. l.32966 \HeaderA {sign}{Sign Function}{sign} ! Undefined control sequence. l.32967 \keyword {arith}{sign} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32969 \begin{Description} \relax ! Undefined control sequence. l.32970 \code {sign} returns a vector with the signs of the corresponding ! Undefined control sequence. l.32971 elements of \code {x} (the sign of a real number is 1, 0, or \eqn{-1}{} ! Undefined control sequence. l.32971 ... sign of a real number is 1, 0, or \eqn {-1}{} ! Undefined control sequence. l.32974 Note that \code {sign} does not operate on complex vectors. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32975 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32977 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32981 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32983 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32984 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32985 \item[\code{x}] a numeric vector ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32986 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32987 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32989 \begin{Details} \relax ! Undefined control sequence. l.32990 This is an \LinkA {internal generic}{internal generic} \LinkA{primiti... ! Undefined control sequence. l.32990 ...ernal generic}{internal generic} \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.32992 \code {\LinkA{Math}{S3groupGeneric}} group generic. ! Undefined control sequence. l.32992 \code{\LinkA {Math}{S3groupGeneric}} group generic. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32993 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32995 \begin{SeeAlso} \relax ! Undefined control sequence. l.32996 \code {\LinkA{abs}{abs}} ! Undefined control sequence. l.32996 \code{\LinkA {abs}{abs}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32997 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32999 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33000 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.33001 sign(pi) # == 1 ! You can't use `macro parameter character #' in horizontal mode. l.33002 sign(-2:3) # -1 -1 0 1 1 1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33003 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33004 \end{Examples} ! Undefined control sequence. l.33005 \HeaderA {Signals}{Interrupting Execution of R}{Signals} ! Undefined control sequence. l.33006 \keyword {utilities}{Signals} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33008 \begin{Description} \relax ! Undefined control sequence. l.33009 On receiving \code {SIGUSR1} \R{} will save the workspace and quit. ! Undefined control sequence. l.33009 On receiving \code{SIGUSR1} \R {} will save the workspace and quit. ! Undefined control sequence. l.33010 \code {SIGUSR2} has the same result except that the \code{\LinkA{.Las... ! Undefined control sequence. l.33010 ...s the same result except that the \code {\LinkA{.Last}{.Last}} ! Un [61defined control sequence. l.33010 ...ame result except that the \code{\LinkA {.Last}{.Last}} ! Undefined control sequence. l.33011 function and \code {\LinkA{on.exit}{on.exit}} expressions will not be... ! Undefined control sequence. l.33011 function and \code{\LinkA {on.exit}{on.exit}} expressions will not be... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33012 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33014 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33019 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33021 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33022 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33023 \item[\code{pid}] The process ID of the \R{} process. ! Undefined control sequence. l.33023 \item[\code{pid}] The process ID of the \R {} process. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33024 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33025 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33027 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33033 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33035 \begin{Section} {Warning} ! Undefined control sequence. l.33036 It is possible that one or more \R {} objects will be undergoing ! LaTeX Erro [56]r: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33039 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33041 \begin{SeeAlso} \relax ! Undefined control sequence. l.33042 \code {\LinkA{Sys.getpid}{Sys.getpid}} to report the process ID for f... ! Undefined control sequence. l.33042 \code{\LinkA {Sys.getpid}{Sys.getpid}} to report the process ID for f... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33043 \end{SeeAlso} ! Undefined control sequence. l.33044 \HeaderA {sink}{Send R Output to a File}{sink} ! Undefined control sequence. l.33045 \methaliasA {sink.number}{sink}{sink.number} ! Undefined control sequence. l.33046 \keyword {file}{sink} ! Undefined control sequence. l.33047 \keyword {connection}{sink} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33049 \begin{Description} \relax ! Undefined control sequence. l.33050 \code {sink} diverts \R{} output to a connection (and stops such dive... ! Undefined control sequence. l.33050 \code{sink} diverts \R {} output to a connection (and stops such dive... ! Undefined control sequence. l.33052 \code {sink.number()} reports how many diversions are in use. ! Undefined control sequence. l.33054 \code {sink.number(type = "message")} reports the number of the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33056 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33058 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33065 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33067 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33068 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33069 \item[\code{file}] a writable \LinkA{connection}{connection} or a ch... ! Undefined control sequence. l.33069 \item[\code{file}] a writable \LinkA {connection}{connection} or a ch... ! Undefined control sequence. l.33070 file to write to, or \code {NULL} to stop sink-ing. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33071 \item[\code{append}] logical. If \code{TRUE}, output will be append... ! Undefined control sequence. l.33071 \item[\code{append}] logical. If \code {TRUE}, output will be append... ! Undefined control sequence. l.33072 \code {file}; otherwise, it will overwrite the contents of ! Undefined control sequence. l.33073 \code {file}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33074 \item[\code{type}] character string. Either the output stream or th... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33076 \item[\code{split}] logical: if \code{TRUE}, output will be sent to ... ! Undefined control sequence. l.33076 \item[\code{split}] logical: if \code {TRUE}, output will be sent to ... ! Undefined control sequence. l.33077 ...put stream, like the Unix program \code {tee}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33078 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33079 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33081 \begin{Details} \relax ! Undefined control sequence. l.33082 \code {sink} diverts \R{} output to a connection (and must be used again ! Undefined control sequence. l.33082 \code{sink} diverts \R {} output to a connection (and must be used again ! Undefined control sequence. l.33083 ...uch a diversion, see below!). If \code {file} is a [320]] ! Undefined control sequence. l.33087 Normal \R {} output (to connection \code{\LinkA{stdout}{stdout}}) is ... ! Undefined control sequence. l.33087 Normal \R{} output (to connection \code {\LinkA{stdout}{stdout}}) is ... ! Undefined control sequence. l.33087 ...\R{} output (to connection \code{\LinkA {stdout}{stdout}}) is dive... ! Undefined control sequence. l.33088 the default \code {type = "output"}. Only prompts and (most) ! Undefined control sequence. l.33090 \code {\LinkA{stderr}{stderr}()} (including those from \code{\LinkA{m... ! Undefined control sequence. l.33090 \code{\LinkA {stderr}{stderr}()} (including those from \code{\LinkA{m... ! Undefined control sequence. l.33090 ...{stderr}()} (including those from \code {\LinkA{message}{message}}, ! Undefined control sequence. l.33090 ...}()} (including those from \code{\LinkA {message}{message}}, ! Undefined control sequence. l.33091 \code {\LinkA{warning}{warning}} and \code{\LinkA{stop}{stop}}) can b... ! Undefined control sequence. l.33091 \code{\LinkA {warning}{warning}} and \code{\LinkA{stop}{stop}}) can b... ! Undefined control sequence. l.33091 \code{\LinkA{warning}{warning}} and \code {\LinkA{stop}{stop}}) can b... ! Undefined control sequence. l.33091 ...nkA{warning}{warning}} and \code{\LinkA {stop}{stop}}) can be dive... ! Undefined control sequence. l.33092 \code {sink(type = "message")} (see below). ! Undefined control sequence. l.33094 \code {sink()} or \code{sink(file = NULL)} ends the last diversion (of ! Undefined control sequence. l.33094 \code{sink()} or \code {sink(file = NULL)} ends the last diversion (of ! Undefined control sequence. l.33099 If \code {file} is a connection it will be opened if necessary (in ! Undefined control sequence. l.33100 \code {"wt"} mode) and closed once it is removed from the stack of ! Undefined control sequence. l.33103 \code {split = TRUE} only splits \R{} output (via \code{Rvprintf}) and ! Undefined control sequence. l.33103 \code{split = TRUE} only splits \R {} output (via \code{Rvprintf}) and ! Undefined control sequence. l.33103 ...RUE} only splits \R{} output (via \code {Rvprintf}) and ! Undefined control sequence. l.33104 the default output from \code {\LinkA{writeLines}{writeLines}}: it do... ! Undefined control sequence. l.33104 the default output from \code{\LinkA {writeLines}{writeLines}}: it do... ! Undefined control sequence. l.33105 all output that might be sent to \code {\LinkA{stdout}{stdout}()}. ! Undefined control sequence. l.33105 ...tput that might be sent to \code{\LinkA {stdout}{stdout}()}. ! Undefined control sequence. l.33108 For that stream \code {file} must be an already open connection, and ! Undefined control sequence. l.33111 If \code {file} is a character string, the file will be opened using ! Undefined control sequence. l.33114 \code {\LinkA{file}{file}} connection --- but some ways to produce \R... ! Undefined control sequence. l.33114 \code{\LinkA {file}{file}} connection --- but some ways to produce \R... ! Undefined control sequence. l.33114 ...nection --- but some ways to produce \R {} output ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Comp [62 [57anion for explanation. Type H for immediate help. ... l.33116 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33118 \begin{Value} ! Undefined control sequence. l.33119 \code {sink} returns \code{NULL}. ! Undefined control sequence. l.33119 \code{sink} returns \code {NULL}. ! Undefined control sequence. l.33121 For \code {sink.number()} the number (0, 1, 2, \dots) of diversions of ! Undefined control sequence. l.33124 For \code {sink.number("message")} the connection number used for ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33126 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33128 \begin{Section} {Warning} ! Undefined control sequence. l.33129 ...use a connection that is open for \code {sink} for any other ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33134 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33136 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33144 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33146 \begin{SeeAlso} \relax ! Undefined control sequence. l.33147 \code {\LinkA{capture.output}{capture.output}} ! Undefined control sequence. l.33147 \code{\LinkA {capture.output}{capture.output}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33148 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33150 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33151 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.33158 # # capture all the ]output to a file. ! You can't use `macro parameter character #' in vertical mode. l.33158 ## capture all the output to a file. ! You can't use `macro parameter character #' in horizontal mode. l.33163 # # revert output back to the console -- only then access the file! ! You can't use `macro parameter character #' in horizontal mode. l.33163 ## revert output back to the console -- only then access the file! ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33167 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33168 \end{Examples} ! Undefined control sequence. l.33169 \HeaderA {slice.index}{Slice Indexes in an Array}{slice.index} ! Undefined control sequence. l.33170 \keyword {array}{slice.index} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33172 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33175 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33177 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33181 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33183 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33184 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33185 \item[\code{x}] an array. If \code{x} has no dimension attribute, i... ! Undefined control sequence. l.33185 \item[\code{x}] an array. If \code {x} has no dimension attribute, i... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33187 \item[\code{MARGIN}] an integer giving the dimension number to slice... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33188 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33189 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33191 \begin{Value} ! Undefined control sequence. l.33192 An integer array \code {y} with dimensions corresponding to those of ! Undefined control sequence. l.33193 \code {x} such that all elements of slice number \code{i} with respect ! Undefined control sequence. l.33193 ...that all elements of slice number \code {i} with respect ! Undefined control sequence. l.33194 to dimension \code {MARGIN} have value \code{i}. ! Undefined control sequence. l.33194 ...imension \code{MARGIN} have value \code {i}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33195 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33197 \begin{SeeAlso} \relax ! Undefined control sequence. l.33198 \code {\LinkA{row}{row}} and \code{\LinkA{col}{col}} for determining ... ! Undefined control sequence. l.33198 \code{\LinkA {row}{row}} and \code{\LinkA{col}{col}} for determining ... ! Undefined control sequence. l.33198 \code{\LinkA{row}{row}} and \code {\LinkA{col}{col}} for determining ... ! Undefined control sequence. l.33198 \code{\LinkA{row}{row}} and \code{\LinkA {col}{col}} for determining ... ! Undefined control sequence. l.33199 ... fact, these are special cases of \code {slice.index} ! Undefined control sequence. l.33200 corresponding to \code {MARGIN} equal to 1 and 2, respectively when \... ! Undefined control sequence. l.33200 ...ual to 1 and 2, respectively when \code {x} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33202 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33204 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33205 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33208 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33209 \end{Examples} ! Undefined control sequence. l.33210 \HeaderA {slotOp}{Extract or Replace A Slot}{slotOp} ! Undefined control sequence. l.33211 \aliasA {@}{slotOp}{@} ! Undefined control sequence. l.33212 \aliasA {@<\Rdash{}}{slotOp}{@<.Rdash.} ! Undefined control sequence. l.33212 \aliasA{@<\Rdash {}}{slotOp}{@<.Rdash.} ! Undefined control sequence. l.33213 \keyword {manip}{slotOp} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33215 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33218 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33220 \begin{Usage} [321 [58] [64 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33225 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33227 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33228 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33229 \item[\code{object}] An object from a formally defined (S4) class. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33230 \item[\code{name}] The character-string name of the slot, quoted or ! Undefined control sequence. l.33232 of \code {object}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33233 \item[\code{value}] A replacement value for the slot, which must be ... ! Undefined control sequence. l.33235 definition of the class of \code {object}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33236 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33237 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33239 \begin{Details} \relax ! Undefined control sequence. l.33240 ...port the formal classes of package \pkg {methods}, ! Undefined control sequence. l.33241 and are enabled only when package \pkg {methods} is loaded (as per ! Undefined control sequence. l.33242 default). See \code {\LinkA{slot}{slot}} for further details, in par... ! Undefined control sequence. l.33242 default). See \code{\LinkA {slot}{slot}} for further details, in par... ! Undefined control sequence. l.33243 for the differences between \code {slot()} and the \code{@} operator. ! Undefined control sequence. l.33243 ...ces between \code{slot()} and the \code {@} operator. ! Undefined control sequence. l.33245 It is checked that \code {obj]]ect} is an S4 object (see ! Undefined control sequence. l.33246 \code {\LinkA{isS4}{isS4}}), and it is an error to attempt to use \co... ! Undefined control sequence. l.33246 \code{\LinkA {isS4}{isS4}}), and it is an error to attempt to use \co... ! Undefined control sequence. l.33246 ... it is an error to attempt to use \code {@} on ! Undefined control sequence. l.33247 ... (There is an exception for name \code {.Data} for ! Undefined control sequence. l.33252 ... internal generic operators: see \LinkA {InternalMethods}{Internal... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33253 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33255 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33257 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33259 \begin{SeeAlso} \relax ! Undefined control sequence. l.33260 \code {\LinkA{Extract}{Extract}}, \code{\LinkA{slot}{slot}} ! Undefined control sequence. l.33260 \code{\LinkA {Extract}{Extract}}, \code{\LinkA{slot}{slot}} ! Undefined control sequence. l.33260 \code{\LinkA{Extract}{Extract}}, \code {\LinkA{slot}{slot}} ! Undefined control sequence. l.33260 ...\LinkA{Extract}{Extract}}, \code{\LinkA {slot}{slot}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33261 \end{SeeAlso} ! Undefined control sequence. l.33262 \HeaderA {socketSelect}{Wait on Socket Connections}{socketSelect} ! Undefined control sequence. l.33263 \keyword {connection}{socketSelect} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33265 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33267 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33269 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33273 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33275 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33276 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33277 \item[\code{socklist}] list of open socket connections ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33278 \item[\code{write}] logical. If \code{TRUE} wait for corresponding ... ! Undefined control sequence. l.33278 \item[\code{write}] logical. If \code {TRUE} wait for corresponding ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33281 \item[\code{timeout}] numeric or \code{NULL}. Time in seconds to wai... ! Undefined control sequence. l.33281 \item[\code{timeout}] numeric or \code {NULL}. Time in seconds to wai... ! Undefined control sequence. l.33282 socket to become available; \code {NULL} means wait ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33284 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33285 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33287 \begin{Details} \relax ! Undefined control sequence. l.33288 The values in \code {write} are recycled if necessary to make up a ! Undefined control sequence. l.33289 logical vector the same length as \code {socklist}. Socket connections ! Undefined control sequence. l.33290 can appear more than once in \code {socklist}; this can be useful if ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33293 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33295 \begin{Value} ! Undefined control sequence. l.33296 Logical the same length as \code {socklist} indicating ! Undefined control sequence. l.33298 ...ing on the corresponding value of \code {write}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33299 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33301 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33302 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.33303 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.33303 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.33304 # # test whether socket connection s is available for writing or reading ! You can't use `macro parameter character #' in horizontal mode. l.33304 ## test whether socket connection s is available for writing or reading ! You can't use `macro parameter character #' in vertical mode. l.33307 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.33307 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33308 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33309 \end{Examples} ! Undefined control sequence. l.33310 \HeaderA {solve}{Solve a System of Equations}{solve} ! Undefined control sequence. l.33311 \methaliasA {solve.default}{solve}{solve.default} ! Undefined control sequence. l.33312 \keyword {algebra}{solve} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33314 \begin{Description} \relax ! Undefined control sequence. l.33315 ...eric function solves the equation \code {a \%*\% x = b} for \code{x}, ! Undefined control sequence. l.33315 ...equation \code{a \%*\% x = b} for \code {x}, ! Undefined control sequence. l.33316 where \code {b} can be either a vector or a matrix. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33317 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3 [59 [653319 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 33307--33320 []\OT1/cmr/m/n/10 End(Not run) solve-Solve a Sys-tem of Equa-tion-s-solve Underfull \hbox (badness 7291) in paragraph at lines 33307--33320 \OT1/cmr/m/n/10 solve.defaultsolvesolve.default al-ge-bra-solve This generic fu nc-tion solves ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33326 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33328 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33329 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33330 \item[\code{a}] a square numeric or complex matrix containing the co... [322]]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33332 \item[\code{b}] a numeric or complex vector or matrix giving the rig... ! Undefined control sequence. l.33333 ...f the linear system. If missing, \code {b} is taken to be ! Undefined control sequence. l.33334 an identity matrix and \code {solve} will return the inverse of \code... ! Undefined control sequence. l.33334 ...solve} will return the inverse of \code {a}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33335 \item[\code{tol}] the tolerance for detecting linear dependencies in... ! Undefined control sequence. l.33336 columns of \code {a}. The default is \code{.Machine\$double.eps}. Not ! Undefined control sequence. l.33336 columns of \code{a}. The default is \code {.Machine\$double.eps}. Not ! Undefined control sequence. l.33337 currently used with complex matrices \code {a}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33338 \item[\code{LINPACK}] logical. Defunct and ignored. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33339 \item[\code{...}] further arguments passed to or from other methods ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33340 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33341 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33343 \begin{Details} \relax ! Undefined control sequence. l.33344 \code {a} or \code{b} can be complex, but this uses double complex ! Undefined control sequence. l.33344 \code{a} or \code {b} can be complex, but this uses double complex ! Undefined control sequence. l.33348 of \code {a} and of \code{b} respectively. If \code{b} is missing the ! Undefined control sequence. l.33348 of \code{a} and of \code {b} respectively. If \code{b} is missing the ! Undefined control sequence. l.33348 ...and of \code{b} respectively. If \code {b} is missing the ! Undefined control sequence. l.33349 ...f the result are the row names of \code {a}. No check is ! Undefined control sequence. l.33350 made that the column names of \code {a} and the row names of \code{b} ! Undefined control sequence. l.33350 ... of \code{a} and the row names of \code {b} ! Undefined control sequence. l.33353 For back-compatibility \code {a} can be a (real) QR decomposition, ! Undefined control sequence. l.33354 although \code {\LinkA{qr.solve}{qr.solve}} should be called in that ... ! Undefined control sequence. l.33354 although \code{\LinkA {qr.solve}{qr.solve}} should be called in that ... ! Undefined control sequence. l.33355 \code {\LinkA{qr.solve}{qr.solve}} can handle non-square systems. ! Undefined control sequence. l.33355 \code{\LinkA {qr.solve}{qr.solve}} can handle non-square systems. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33360 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33362 \begin{Source} \relax ! Undefined control sequence. l.33363 ... interface to the LAPACK routines \code {DGESV} ! Undefined control sequence. l.33364 and \code {ZGESV}. ! Undefined control sequence. l.33366 LAPACK is from \url {http://www.netlib.org/lapack}. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33367 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33369 \begin{References} \relax ! Undefined control sequence. l.33373 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.33373 ...ttp://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.33373 ....netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.33374 ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33378 \end{References} ! Missing } inserted. } l.33378 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33380 \begin{SeeAlso} \relax ! Undefined control sequence. l.33381 \code {\LinkA{solve.qr}{solve.qr}} for the \code{qr} method, ! Undefined control sequence. l.33381 \code{\LinkA {solve.qr}{solve.qr}} for the \code{qr} method, ! Undefined control sequence. l.33381 ...inkA{solve.qr}{solve.qr}} for the \code {qr} method, ! Undefined control sequence. l.33382 \code {\LinkA{chol2inv}{chol2inv}} for inver [60ting from the Choleski fa... ! Undefined control sequence. l.33382 \code{\LinkA {chol2inv}{chol2inv}} for inverting from the Choleski fa... ! Undefined control sequence. l.33383 \code {\LinkA{backsolve}{backsolve}}, \code{\LinkA{qr.solve}{qr.solve}}. ! Undefined control sequence. l.33383 \code{\LinkA {backsolve}{backsolve}}, \code{\LinkA{qr.solve}{qr.solve}}. ! Undefined control sequence. l.33383 \code{\LinkA{backsolve}{backsolve}}, \code {\LinkA{qr.solve}{qr.solve}}. ! Undefined control sequence. l.33383 ...kA{backsolve}{backsolve}}, \code{\LinkA {qr.solve}{qr.solve}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33384 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33386 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33387 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.33395 # # might not be supported on all platforms ! You can't use `macro parameter character #' in horizontal mode. l.33395 ## might not be supported on all platforms ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33397 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33398 \end{Examples} ! Undefined control sequence. l.33399 \HeaderA {sort}{Sorting or Ordering Vectors}{sort} ! Undefined control sequence. l.33400 \methaliasA {sort.default}{sort}{sort.default} ! Undefined control sequence. l.33401 \methaliasA {sort.int}{sort}{sort.int} ! Undefined control sequence. l.33402 \methaliasA {sort.POSIXlt}{sort}{sort.POSIXlt} ! Undefined control sequence. l.33403 \keyword {univar}{sort} ! Undefined control sequence. l.33404 \keyword {manip}{sort} ! Undefined control sequence. l.33405 \keyword {arith}{sort} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33407 \begin{Description} \relax ! Undefined control sequence. l.33410 ....g., for sorting data frames, see \code {\LinkA{order}{order}}. ! Undefined control sequence. l.33410 ...r sorting data frames, see \code{\LinkA {order}{order}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33411 \end{Description} ! LaTeX Error: Environment] [66 Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33413 \begin{Usage} Overfull \hbox (59.24648pt too wide) in paragraph at lines 33422--33422 [] \OT1/cmtt/m/n/10 method = c("auto", "shell", "quick", "radix"), inde x.return = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33423 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33425 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33426 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33427 \item[\code{x}] for \code{sort} an \R{} object with a class or a num... ! Undefined control sequence. l.33427 \item[\code{x}] for \code {sort} an \R{} object with a class or a num... ! Undefined control sequence. l.33427 \item[\code{x}] for \code{sort} an \R {} object with a class or a num... ! Undefined control sequence. l.33428 ...character or logical vector. For \code {sort.int}, a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33430 \item[\code{decreasing}] logical. Should the sort be increasing or ... ! Undefined control sequence. l.33431 For the \code {"radix"} method, this can be a vector of ! Undefined control sequence. l.33432 ...ual to the number of arguments in \code {...}. For the [323]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33434 \item[\code{...}] arguments to be passed to or from methods or (for the ! Undefined control sequence. l.33435 ...s and objects without a class) to \code {sort.int}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33436 \item[\code{na.last}] for controlling the treatment of \code{NA}s. ! Undefined control sequence. l.33436 ... for controlling the treatment of \code {NA}s. ! Undefined control sequence. l.33437 If \code {TRUE}, missing values in the data are put last; if ! Undefined control sequence. l.33438 \code {FALSE}, they are put first; if \code{NA}, they are removed. ! Undefined control sequence. l.33438 \code{FALSE}, they are put first; if \code {NA}, they are removed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33439 \item[\code{partial}] \code{NULL} or a vector of indices for partia... ! Undefined control sequence. l.33439 \item[\code{partial}] \code {NULL} or a vector of indices for partia... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33440 \item[\code{method}] character string specifying the algorithm used.... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33442 \item[\code{index.return}] logical indicating if the ordering index ... ! Undefined control sequence. l.33443 be returned as well. Supported by \code {method == "radix"} for any ! Undefined control sequence. l.33444 \code {na.last} mode and data type, and the other methods when ! Undefined control sequence. l.33445 \code {na.last = NA} (the default) and fully sorting non-factors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33446 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33447 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33449 \begin{Details} \relax ! Undefined control sequence. l.33450 \code {sort} is a generic function for which methods can [67be written, ! Undefined control sequence. l.33451 and \code {sort.int} is the internal method which is compatible ! Undefined control sequence. l.33454 The default \code {sort} method makes use of \code{\LinkA{order}{orde... ! Undefined control sequence. l.33454 ...t \code{sort} method makes use of \code {\LinkA{order}{order}} for ! Undefined control sequence. l.33454 ...{sort} method makes use of \code{\LinkA {order}{order}} for ! Undefined control sequence. l.33456 \code {\LinkA{xtfrm}{xtfrm}} (and can be slow unless a \code{xtfrm} m... ! Undefined control sequence. l.33456 \code{\LinkA {xtfrm}{xtfrm}} (and can be slow unless a \code{xtfrm} m... ! Undefined control sequence. l.33456 ...xtfrm}} (and can be slow unless a \code {xtfrm} method has ! Undefined control sequence. l.33457 been defined or \code {\LinkA{is.numeric}{is.numeric}(x)} is true). ! Undefined control sequence. l.33457 been defined or \code{\LinkA {is.numeric}{is.numeric}(x)} is true). ! Undefined control sequence. l.33462 The \code {"auto"} method selects \code{"radix"} for short (less than ! Undefined control sequence. l.33462 The \code{"auto"} method selects \code {"radix"} for short (less than ! Undefined control sequence. l.33463 \eqn {2^{31}}{} elements) numeric vectors, integer vectors, logical ! Missing $ inserted. $ l.33463 \eqn{2^ {31}}{} elements) numeric vectors, integer vectors, logical ! Extra }, or forgotten $. l.33463 \eqn{2^{31}} {} elements) numeric vectors, integer vectors, logical ! Undefined control sequence. l.33464 vectors and factors; otherwise, \code {"shell"}. ! Missing $ inserted. $ l.33465 Underfull \hbox (badness 10000) in paragraph at lines 33462--33465 []\OT1/cmr/m/n/10 The "auto" method se-lects "radix" for short (less than Overfull \hbox (52.62856pt too wide) in paragraph at lines 33462--33465 \OT1/cmr/m/n/10 2$[][]\OML/cmm/m/it/10 elements\OT1/cmr/m/n/10 )\OML/cmm/m/it/1 0 numericvectors; integervectors; logicalvectorsandfactors\OT1/cmr/m/n/10 ; \OM L/cmm/m/it/10 otherwise; []:$ ! Undefined control sequence. l.33466 Except for method \code {"radix"}, ! Undefined control sequence. l.33468 sequence of the locale in use: see \code {\LinkA{Comparison}{Comparis... ! Undefined control sequence. l.33468 ... of the locale in use: see \code{\LinkA {Comparison}{Comparison}}. ! Undefined control sequence. l.33473 If \code {partial} is not \code{NULL}, it is taken to contain indices ! Undefined control sequence. l.33473 If \code{partial} is not \code {NULL}, it is taken to contain indices ! Undefined control sequence. l.33481 substantially more efficient if \code {partial} has a handful of ! Undefined control sequence. l.33485 Method \code {"shell"} uses Shellsort (an \eqn{O(n^{4/3})}{} variant ... ! Undefined control sequence. l.33485 ... \code{"shell"} uses Shellsort (an \eqn {O(n^{4/3})}{} variant from ! Missing $ inserted. $ l.33485 ...e{"shell"} uses Shellsort (an \eqn{O(n^ {4/3})}{} variant from ! Extra }, or forgotten $. l.33485 ...l"} uses Shellsort (an \eqn{O(n^{4/3})} {} variant from ! Undefined control sequence. l.33486 Sedgewick (1986)). If \code {x} has names a stable modification is ! Missing $ inserted. $ l.33489 Overfull \hbox (447.87828pt too wide) in paragraph at lines 33485--33489 []\OT1/cmr/m/n/10 Method "shell" uses Shell-sort (an O(n$[])[]\OML/cmm/m/it/10 variantfromSedgewick\OT1/cmr/m/n/10 (1986))\OML/cmm/m/it/10 :Ifxhasnamesastable modificationisused; sotiesarenotreordered:\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Thi sonlymattersifnamesarepresent:\OT1/cmr/m/n/10 )$ ! Undefined control sequence. l.33490 Method \code {"quick"} uses Singleton (1969)'s implementation of ! Undefined control sequence. l.33491 ...method and is only available when \code {x} is ! Undefined control sequence. l.33492 numeric (double or integer) and \code {partial} is \code{NULL}. (For ! Undefined control sequence. l.33492 ...or integer) and \code{partial} is \code {NULL}. (For ! Undefined control sequence. l.33493 other types of \code {x} Shellsort is used, silently.) It is normally ! Undefined control sequence. l.33500 Method \code {"radix"} relies on simple hashing to scale time linearly [324]] [61 ! Undefined control sequence. l.33511 The \code {"radix"} method generally outperforms the other methods, ! Undefined control sequence. l.33515 \code {na.last} options). The implementation is orders of magnitude ! Undefined control sequence. l.33517 use of the internal \code {CHARSXP} table. ! Undefined control sequence. l.33523 If \code {x} is a \code{character} vector, all elements must share ! Undefined control sequence. l.33523 If \code{x} is a \code {character} vector, all elements must share ! Undefined control sequence. l.33528 ...textasciicircum{}32 elements) and \code {complex} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33534 \end{Details} ! Missing } inserted. } l.33534 \end{Details} ! Missing } inserted. } l.33534 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33536 \begin{Value} ! Undefined control sequence. l.33537 For \code {sort}, the result depends on the S3 method which is ! Undefined control sequence. l.33538 dispatched. If \code {x} does not have a class \code{sort.int} is used ! Undefined control sequence. l.33538 ...If \code{x} does not have a class \code {sort.int} is used ! Undefined control sequence. l.33541 \code {x[order(x, ...)]}: this depends on the class having a suitable ! Undefined control sequence. l.33542 method for \code {[} (and also that \code{\LinkA{order}{order}} will ... ! Undefined control sequence. l.33542 method for \code{[} (and also that \code {\LinkA{order}{order}} will ... ! Undefined control sequence. l.33542 ...or \code{[} (and also that \code{\LinkA {order}{order}} will work, ! Undefined control sequence. l.33543 which requires a \code {\LinkA{xtfrm}{xtfrm}} method). ! Undefined control sequence. l.33543 which requires a \code{\LinkA {xtfrm}{xtfrm}} method). ! Undefined control sequence. l.33545 For \code {sort.int} the value is the sorted vector unless ! Undefined control sequence. l.33546 \code {index.return} is true, when the result is a list with components ! Undefined control sequence. l.33547 named \code {x} and \code{ix} containing the sorted numbers and the ! Undefined control sequence. l.33547 named \code{x} and \code {ix} containing the sorted numbers and the ! Undefined control sequence. l.33548 ...x vector. In the latter case, if \code {method == ! Undefined control sequence. l.33550 \code {sort.list}) as quicksort is not stable. For \code{method == ! Undefined control sequence. l.33550 ... as quicksort is not stable. For \code {method == ! Undefined control sequence. l.33551 "radix"}, \code {index.return} is supported for all \code{na.last} ! Undefined control sequence. l.33551 ...ndex.return} is supported for all \code {na.last} ! Undefined control sequence. l.33552 ...s. The other methods only support \code {index.return} ! Undefined control sequence. l.33553 when \code {na.last} is \code{NA}. The index vector ! Undefined control sequence. l.33553 when \code{na.last} is \code {NA}. The index vector ! Undefined control sequence. after removal of \code {NA}s l.33554 ...bers \emph{after removal of \code{NA}s} : see ! Undefined control sequence. l.33555 \code {\LinkA{order}{order}} if you want the original element numbers. ! Undefined control sequence. l.33555 \code{\LinkA {order}{order}} if you want the original element numbers. ! Undefined control sequence. l.33559 \code {partial} is specified even the names are removed.) Note that ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33563 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33565 \begin{References} \relax ! Undefined control sequence. l.33576 \emph{J. Algorithms} \bold {7}, 159--173. ! Undefined control sequence. l.33580 \emph{Communications of the ACM} \bold {12}, 185--187. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33581 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33583 \begin{SeeAlso} \relax ! Undefined control sequence. l.33584 `\LinkA {Comparison}{Comparison}' for how character strings are colla... ! Undefined control sequence. l.33586 \code {\LinkA{order}{order}} for sorting on or reordering multiple va... ! Undefined control sequence. l.33586 \code{\LinkA {order}{order}} for sorting on or reordering multiple va... ! Undefined control sequence. l.33588 \code {\LinkA{is.unsorted}{is.unsorted}}. \code{\LinkA{rank}{rank}}. ! Undefined control sequence. l.33588 \code{\LinkA {is.unsorted}{is.unsorted}}. \code{\LinkA{rank}{rank}}. ! Undefined control sequence. l.33588 ...LinkA{is.unsorted}{is.unsorted}}. \code {\LinkA{rank}{rank}}. ! Undefined control sequence. l.33588 ...s.unsorted}{is.unsorted}}. \code{\LinkA {rank}{rank}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33589 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33591 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33592 \begin{ExampleCode} [68] Chapter 12 ! Missing $ inserted. $ l.33597 ! You can't use `macro parameter character #' in vertical mode. l.33598 # # illustrate 'stable' sorting (of ties): ! You can't use `macro parameter character #' in vertical mode. l.33598 ## illustrate 'stable' sorting (of ties): ! You can't use `macro parameter character #' in horizontal mode. l.33599 ...ethod = "shell", index.return = TRUE) # is stable ! You can't use `macro parameter character #' in horizontal mode. l.33600 # # $x : 2 3 3 4 4 5 5 6 6 7 7 8 8 9 9 10 10 11 12 ! You can't use `macro parameter character #' in horizontal mode. l.33600 ## $x : 2 3 3 4 4 5 5 6 6 7 7 8 8 9 9 10 10 11 12 ! You can't use `macro parameter character #' in math mode. l.33601 # # $ix: 9 8 10 7 11 6 12 5 13 4 14 3 15 2 16 1 17 18 19 ! You can't use `macro parameter character #' in math mode. l.33601 ## $ix: 9 8 10 7 11 6 12 5 13 4 14 3 15 2 16 1 17 18 19 ! You can't use `macro parameter character #' in horizontal mode. l.33602 ...ethod = "quick", index.return = TRUE) # is not ! You can't use `macro parameter character #' in horizontal mode. l.33603 # # $x : 2 3 3 4 4 5 5 6 6 7 7 8 8 9 9 10 10 11 12 ! You can't use `macro parameter character #' in horizontal mode. l.33603 ## $x : 2 3 3 4 4 5 5 6 6 7 7 8 8 9 9 10 10 11 12 ! You can't use `macro parameter character #' in math mode. l.33604 # # $ix: 9 10 8 7 11 6 12 5 13 4 14 3 15 16 2 17 1 18 19 ! You can't use `macro parameter character #' in math mode. l.33604 ## $ix: 9 10 8 7 11 6 12 5 13 4 14 3 15 16 2 17 1 18 19 [325 [62]]] ! You can't use `macro parameter character #' in horizontal mode. l.33607 is.unsorted(x) # FALSE: is sorted ! You can't use `macro parameter character #' in horizontal mode. l.33608 is.unsorted(x, strictly = TRUE) # TRUE : is not (and cannot be) ! You can't use `macro parameter character #' in horizontal mode. l.33609 # sorted strictly ! You can't use `macro parameter character #' in horizontal mode. l.33610 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.33610 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.33611 # # Small speed comparison simulation: ! You can't use `macro parameter character #' in horizontal mode. l.33611 ## Small speed comparison simulation: ! You can't use `macro parameter character #' in horizontal mode. l.33614 rep <- 1000 # << adjust to your CPU ! Missing $ inserted. $ l.33616 for(is in seq_ len(Sim)){ ! Undefined control sequence. l.33623 cat("Speedup factor of quick sort():\n ") ! Missing $ inserted. $ l.33625 Underfull \hbox (badness 1635) in paragraph at lines 33606--33625 []\OT1/cmr/m/n/10 x <- c(1:3, 3:5, 10) is.unsorted(x) FALSE: is sorted is.unso rted(x, Underfull \hbox (badness 1783) in paragraph at lines 33606--33625 \OT1/cmr/m/n/10 strictly = TRUE) TRUE : is not (and can-not be) sorted strict ly Underfull \hbox (badness 1048) in paragraph at lines 33606--33625 \OT1/cmr/m/n/10 Not run: Small speed com-par-i-son sim-u-la-tion: N <- 2000 Si m <- 20 Overfull \hbox (760.38943pt too wide) in paragraph at lines 33606--33625 \OT1/cmr/m/n/10 seq$[]\OML/cmm/m/it/10 en\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sim\ OT1/cmr/m/n/10 ))[]\OML/cmm/m/it/10 rbind\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Shel lSort \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 33606--33625 \OML/cmm/m/it/10 c\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; QuickSort \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 c\OT1/cmr/m/n/10 2)\OML/cmm/m/it/10 cat\OT1/cmr/m/n/10 ("\O ML/cmm/m/it/10 Speedupfactorofquicksort\OT1/cmr/m/n/10 () : ! You can't use `macro parameter character #' in vertical mode. l.33626 # # A larger test ! You can't use `macro parameter character #' in vertical mode. l.33626 ## A larger test ! You can't use `macro parameter character #' in vertical mode. l.33634 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.33634 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33635 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33636 \end{Examples} ! Undefined control sequence. l.33637 \HeaderA {source}{Read R Code from a File, a Connection or Expression... ! Undefined control sequence. l.33638 \aliasA {withAutoprint}{source}{withAutoprint} ! Undefined control sequence. l.33639 \keyword {file}{source} ! Undefined control sequence. l.33640 \keyword {programming}{source} ! Undefined control sequence. l.33641 \keyword {connection}{source} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [69 l.33643 \begin{Description} \relax ! Undefined control sequence. l.33644 \code {source} causes \R{} to accept its input from the named file or... ! Undefined control sequence. l.33644 \code{source} causes \R {} to accept its input from the named file or... ! Undefined control sequence. l.33646 \code {\LinkA{parse}{parse}}d from that file ! Undefined control sequence. l.33646 \code{\LinkA {parse}{parse}}d from that file ! Undefined control sequence. l.33650 \code {withAutoprint(exprs)} is a wrapper for \code{source(exprs = ! Undefined control sequence. l.33650 ...utoprint(exprs)} is a wrapper for \code {source(exprs = ! Undefined control sequence. l.33653 \R {} console. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33654 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33656 \begin{Usage} Overfull \hbox (6.74693pt too wide) in paragraph at lines 33674--33674 [] \OT1/cmtt/m/n/10 print. = TRUE, echo = TRUE, max.deparse.length = Inf,[] Overfull \hbox (38.24666pt too wide) in paragraph at lines 33674--33674 [] \OT1/cmtt/m/n/10 deparseCtrl = c("keepInteger", "showAttributes ", "keepNA"),[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33675 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33677 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33678 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33679 \item[\code{file}] a \LinkA{connection}{connection} or a character s... ! Undefined control sequence. l.33679 \item[\code{file}] a \LinkA {connection}{connection} or a character s... ! Undefined control sequence. l.33680 ...of the file or URL to read from. \code {""} indicates the ! Undefined control sequence. l.33681 connection \code {\LinkA{stdin}{stdin}()}. ! Undefined control sequence. l.33681 connection \code{\LinkA {stdin}{stdin}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33682 \item[\code{local}] \code{TRUE}, \code{FALSE} or an environment, det... ! Undefined control sequence. l.33682 \item[\code{local}] \code {TRUE}, \co [63]de{FALSE} or an environment, det... ! Undefined control sequence. l.33682 \item[\code{local}] \code{TRUE}, \code {FALSE} or an environment, det... ! Undefined control sequence. l.33683 ...arsed expressions are evaluated. \code {FALSE} (the ! Undefined control sequence. l.33685 environment) and \code {TRUE} to the environment from which ! Undefined control sequence. l.33686 \code {source} is called. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33687 \item[\code{echo}] logical; if \code{TRUE}, each expression is printed ! Undefined control sequence. l.33687 \item[\code{echo}] logical; if \code {TRUE}, each expression is printed ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33689 \item[\code{print.eval, print.}] logical; if \code{TRUE}, the result of ! Undefined control sequence. l.33689 ...{print.eval, print.}] logical; if \code {TRUE}, the result of ! Undefined control sequence. l.33690 \code {eval(i)} is printed for each expression \code{i}; defaults ! Undefined control sequence. l.33690 ...)} is printed for each expression \code {i}; defaults ! Undefined control sequence. l.33691 to the value of \code {echo}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33692 \item[\code{exprs}] for \code{source()} and \code{withAutoprint(*, e... ! Undefined control sequence. l.33692 \item[\code{exprs}] for \code {source()} and \code{withAutoprint(*, e... ! Undefined control sequence. l.33692 ...e{exprs}] for \code{source()} and \code {withAutoprint(*, evaluate... ! Undefined control sequence. l.33693 \emph{instead} of specifying \code {file}, an ! Undefined control sequence. l.33694 \code {\LinkA{expression}{expression}}, \code{\LinkA{call}{call}}, or... ! Undefined control sequence. l.33694 \code{\LinkA {expression}{expression}}, \code{\LinkA{call}{call}}, or... ! Undefined control sequence. l.33694 ...{\LinkA{expression}{expression}}, \code {\LinkA{call}{call}}, or \... ! Undefined control sequence. l.33694 ...{expression}{expression}}, \code{\LinkA {call}{call}}, or \code{\L... ! Undefined control sequence. l.33694 ...}}, \code{\LinkA{call}{call}}, or \code {\LinkA{list}{list}} ! Undefined control sequence. l.33694 ...de{\LinkA{call}{call}}, or \code{\LinkA {list}{list}} ! Undefined control sequence. l.33695 of \code {\LinkA{call}{call}}'s, but \emph{not} an unevaluated ``expr... ! Undefined control sequence. l.33695 of \code{\LinkA {call}{call}}'s, but \emph{not} an unevaluated ``expr... [326]] ! Undefined control sequence. l.33697 for \code {withAutoprint()} (with default \code{evaluated=FALSE}): ! Undefined control sequence. l.33697 ...de{withAutoprint()} (with default \code {evaluated=FALSE}): ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33700 \item[\code{evaluated}] logical indicating that \code{exprs} is pass... ! Undefined control sequence. l.33700 ...aluated}] logical indicating that \code {exprs} is passed to ! Undefined control sequence. l.33701 \code {source(exprs= *)} and hence must be evaluated, i.e., a formal ! Undefined control sequence. l.33702 \code {expression}, \code{call} or \code{list} of calls. ! Undefined control sequence. l.33702 \code{expression}, \code {call} or \code{list} of calls. ! Undefined control sequence. l.33702 \code{expression}, \code{call} or \code {list} of calls. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33703 \item[\code{spaced}] logical indicating if newline (hence empty line... ! Undefined control sequence. l.33704 ...nted before each expression (when \code {echo = TRUE}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33705 \item[\code{verbose}] if \code{TRUE}, more diagnostics (than just ! Undefined control sequence. l.33705 \item[\code{verbose}] if \code {TRUE}, more diagnostics (than just ! Undefined control sequence. l.33706 \code {echo = TRUE}) are printed during parsing and evaluation of ! Undefined control sequence. l.33707 input, including extra info for \bold {each} expression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33708 \item[\code{prompt.echo}] character; gives the prompt to be used if ! Undefined control sequence. l.33709 \code {echo = TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33710 \item[\code{max.deparse.length}] integer; is used only if \code{echo... ! Undefined control sequence. l.33710 ...length}] integer; is used only if \code {echo} is ! Undefined control sequence. l.33711 \code {TRUE} and gives the maximal number of characters output for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33713 \item[\code{width.cutoff}] integer, passed to \code{\LinkA{deparse}{... ! Undefined control sequence. l.3371 [703 ...width.cutoff}] integer, passed to \code {\LinkA{deparse}{deparse}(... ! Undefined control sequence. l.33713 ...utoff}] integer, passed to \code{\LinkA {deparse}{deparse}()} which ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33715 \item[\code{deparseCtrl}] \code{\LinkA{character}{character}} vector... ! Undefined control sequence. l.33715 \item[\code{deparseCtrl}] \code {\LinkA{character}{character}} vector... ! Undefined control sequence. l.33715 \item[\code{deparseCtrl}] \code{\LinkA {character}{character}} vector... ! Undefined control sequence. l.33716 \code {control} to \code{\LinkA{deparse}{deparse}()}, see also ! Undefined control sequence. l.33716 \code{control} to \code {\LinkA{deparse}{deparse}()}, see also ! Undefined control sequence. l.33716 \code{control} to \code{\LinkA {deparse}{deparse}()}, see also ! Undefined control sequence. l.33717 \code {\LinkA{.deparseOpts}{.deparseOpts}}. In \R{} version <= 3.3.x... ! Undefined control sequence. l.33717 \code{\LinkA {.deparseOpts}{.deparseOpts}}. In \R{} version <= 3.3.x... ! Undefined control sequence. l.33717 ...kA{.deparseOpts}{.deparseOpts}}. In \R {} version <= 3.3.x, this was ! Undefined control sequence. l.33718 hardcoded to \code {"showAttributes"}, which is the default ! Undefined control sequence. l.33719 currently; \code {deparseCtrl = "all"} may be preferable, when strict ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33721 \item[\code{chdir}] logical; if \code{TRUE} and \code{file} is a pat... ! Undefined control sequence. l.33721 \item[\code{chdir}] logical; if \code {TRUE} and \code{file} is a pat... ! Undefined control sequence. l.33721 ...dir}] logical; if \code{TRUE} and \code {file} is a pathname, ! Undefined control sequence. l.33722 the \R {} working directory is temporarily changed to the directory ! Undefined control sequence. l.33723 containing \code {file} for evaluating. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33724 \item[\code{encoding}] character vector. The encoding(s) to be assu... ! Undefined control sequence. l.33725 \code {file} is a character string: see \code{\LinkA{file}{file}}. A ! Undefined control sequence. l.33725 ...{file} is a character string: see \code {\LinkA{file}{file}}. A ! Undefined control sequence. l.33725 ...is a character string: see \code{\LinkA {file}{file}}. A ! Undefined control sequence. l.33726 possible value is \code {"unknown"} when the encoding is guessed: see ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [64 l.33728 \item[\code{continue.echo}] character; gives the prompt to use on ! Undefined control sequence. l.33729 continuation lines if \code {echo = TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33730 \item[\code{skip.echo}] integer; how many comment lines at the start... ! Undefined control sequence. l.33731 file to skip if \code {echo = TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33732 \item[\code{keep.source}] logical: should the source formatting be r... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33734 \item[\code{...}] (for \code{withAutoprint()}:) further (non-file re... ! Undefined control sequence. l.33734 \item[\code{...}] (for \code {withAutoprint()}:) further (non-file re... ! Undefined control sequence. l.33735 arguments to be passed to \code {source(.)}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33736 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33737 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33739 \begin{Details} \relax ! Undefined control sequence. l.33740 Note that running code via \code {source} differs in a few respects ! Undefined control sequence. l.33741 from entering it at the \R {} command line. Since expressions are not ! Undefined control sequence. l.33743 need to include explicit \code {print} calls for things you want to be ! Undefined control sequence. l.33744 ...r that this includes plotting by \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.33744 ...RAN.R-project.org/package=lattice}{\pkg {lattice}}, ! Undefined control sequence. l.33750 \code {\LinkA{traceback}{traceback}()} will contain additional calls to ! Undefined control sequence. l.33750 \code{\LinkA {traceback}{traceback}()} will contain additional calls to ! Undefined control sequence. l.33751 \code {\LinkA{withVisible}{withVisible}}. ! Undefined control sequence. l.33751 \code{\LinkA {withVisible}{withVisible}}. ! Undefined control sequence. l.33753 All versions of \R {} accept input from a connection with end of line ! Undefined control sequence. l.33758 If \code {keep.source} is true (the default in interactive use), the [327]]] ! Undefined control sequence. l.33771 When \code {skip.echo > 0}, that many comment lines at the start of ! Undefined control sequence. l.33774 \code {skip.echo} lines, echoing will start with the first of them. ! Undefined control sequence. l.33776 If \code {echo} is true and a deparsed expression exceeds ! Undefined control sequence. l.33777 \code {max.deparse.length}, that many characters are output followed by ! Undefined control sequence. l.33778 \code { .... [TRUNCATED] }. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33779 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33781 \begin{Section} {Encodings} ! Undefined control sequence. l.33783 the \R {} session. This is usually what it required, but occasionally ! Undefined control sequence. l.33787 ...rest of this paragraph applies if \code {file} is an actual ! Undefined control sequence. l.33788 filename or URL (and not \code {""} nor a connection). If ! Undefined control sequence. l.33789 \code {encoding = "unknown"}, an attempt is made to guess the encoding: ! Undefined control sequence. l.33790 the result of \code {\LinkA{localeToCharset}{localeToCharset}()} is u... ! Undefined control sequence. l.33790 the result of \code{\LinkA {localeToCharset}{localeToCharset}()} is u... ! Undefined control sequence. l.33791 \code {encoding} has two or more elements, they are tried in turn until ! Undefined control sequence. l.33793 actual \code {encoding} is specified (rather than the default or ! Undefined control sequence. l.33794 \code {"unknown"}) in a Latin-1 or UTF-8 locale then character strings ! Undefined control sequence. l.33796 such (see \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.33796 such (see \code{\LinkA {Encoding}{Encoding}}). ! Undefined control sequence. l.33798 If \code {file} is a connection (including one specified by \code{""}, ! Undefined control sequence. l.33798 ...ction (including one specified by \code {""}, ! Undefined control sequence. l.33799 ...ble to re-encode the input inside \code {source}, and so ! Undefined control sequence. l.33800 the \code {encoding} argument is just used to mark character strings ... ! Undefined control sequence. l.33801 ...in Latin-1 and UTF-8 locales: see \code {\LinkA{parse}{parse}}. ! Undefined control sequence. l.33801 ...n-1 and UTF-8 locales: see \code{\LinkA {parse}{parse}}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33802 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33804 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33808 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33810 \begin{SeeAlso} \relax ! Undefined control sequence. l.33811 \code {\LinkA{demo}{demo}} which uses \code{source}; ! Undefined control sequence. l.33811 \code{\LinkA {demo}{demo}} which uses \code{source}; ! Undefined control sequence. l.33811 \code{\LinkA{demo}{demo}} which uses \code {source}; ! Undefined control sequence. l.33812 \code {\LinkA{eval}{eval}}, \code{\LinkA{parse}{parse}} and \code{\Li... ! Undefined control sequence. l.33812 \code{\LinkA {eval}{eval}}, \code{\LinkA{parse}{parse}} and \code{\Li... ! Undefined control sequence. l.33812 \code{\LinkA{eval}{eval}}, \code {\LinkA{parse}{parse}} and \code{\Li... ! Undefined control sequence. l.33812 \code{\LinkA{eval}{eval}}, \code{\LinkA {parse}{parse}} and \code{\Li... ! Undefined control sequence. l.33812 ..., \code{\LinkA{parse}{parse}} and \code {\LinkA{scan}{scan}}; ! Undefined control sequence. l.33812 ...{\LinkA{parse}{parse}} and \code{\LinkA {scan}{scan}}; ! Undefined control sequence. l.33813 \code {\LinkA{options}{options}("keep.source")}. ! Undefined control sequence. l.33813 \code{\LinkA {options}{options}("keep.source")}. ! Undefined control sequence. l.33815 \code {\LinkA{sys.source}{sys.source}} which is a streamlined version... ! Undefined control sequence. l.33815 \code{\LinkA {sys.source}{sys.source}} which is a streamlined version... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33820 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33822 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33823 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.33825 # # want an if-clause to behave "as top level" wrt auto-printing : ! You can't use `macro parameter character #' in horizontal mode. l.33825 ## want an if-clause to behave "as top level" wrt auto-printing : ! You can't use `macro parameter character #' in horizontal mode. l.33826 # # (all should look "as if on top level", e.g. non-assignments shoul... ! You can't use `macro parameter character #' in horizontal mode. l.33826 ## (all should look "as if on top level", e.g. non-assignments shoul... ! Missing $ inserted. $ l.33830 (y <- (x-5)^ 2) ! Extra }, or forgotten $. l.33833 } ) ! Missing $ inserted. $ l.33834 ! You can't use `macro parameter character #' in vertical mode. l.33835 # # If you want to source() a bunch of files, somethi Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71ng like ! You can't use `macro parameter character #' in vertical mode. l.33835 ## If you want to source() a bunch of files, something like ! You can't use `macro parameter character #' in horizontal mode. l.33836 # # the following may be useful: ! You can't use `macro parameter character #' in horizontal mode. l.33836 ## the following may be useful: ! Undefined control sequence. l.33841 if(trace) cat("\n ") ! Extra }, or forgotten $. l.33843 } ! Missing $ inserted. $ l.33844 Underfull \hbox (badness 10000) in paragraph at lines 33835--33844 []\OT1/cmr/m/n/10 If you want to source() a bunch of files, some-thing like Underfull \hbox (badness 10000) in paragraph at lines 33835--33844 \OT1/cmr/m/n/10 the fol-low-ing may be use-ful: sourceDir <- func-tion(path, Underfull \hbox (badness 7168) in paragraph at lines 33835--33844 \OT1/cmr/m/n/10 trace = TRUE, ...) for (nm in list.files(path, pat-tern = Overfull \hbox (25.80028pt too wide) in paragraph at lines 33835--33844 \OT1/cmr/m/n/10 "[.][RrSsQq]$"))[]$ ! You can't use `macro parameter character #' in horizontal mode. l.33845 suppressWarnings( rm(x,y) ) # remove 'x' or 'y' from global env ! Undefined control sequence. l.33846 withAutoprint({ x <- 1:2; cat("x=",x,"\n "); y <- x^2 }) ! Missing $ inserted. $ l.33846 ...t({ x <- 1:2; cat("x=",x,"\n"); y <- x^ 2 }) ! Extra }, or forgotten $. l.33846 ... x <- 1:2; cat("x=",x,"\n"); y <- x^2 } ) ! You can't use `macro parameter character #' in math mode. l.33847 # # x and y now exist: ! You can't use `macro parameter character #' in math mode. l.33847 ## x and y now exist: ! Missing $ inserted. $ l.33849 Underfull \hbox (badness 3514) in paragraph at lines 33845--33849 []\OT1/cmr/m/n/10 suppressWarnings( rm(x,y) ) re-move 'x' or 'y' from global e nv Underfull \hbox (badness 5637) in paragraph at lines 33845--33849 \OT1/cmr/m/n/10 with-Au-to-print( x <- 1:2; cat("x=",x,""); y <- x$[])\OML/cmm/ m/it/10 xandynowexist \OT1/cmr/m/n/10 : ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33853 \end{ExampleCode} ! Missing } inserted. } l.33853 \end{ExampleCode} ! Missing } inserted. } l.33853 \end{ExampleCode} ! Missing } inserted. } l.33853 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33854 \end{Examples} ! Undefined control sequence. l.33855 \HeaderA {Special}{Special Functions of Mathematics}{Special} ! Undefined control sequence. l.33856 \aliasA {beta}{Special}{beta} ! Undefined control sequence. l.33857 \aliasA {choose}{Special}{choose} ! Undefined control sequence. l.33858 \aliasA {digamma}{Special}{digamma} ! Undefined control sequence. l.33859 \aliasA {factorial}{Special}{factorial} ! Undefined control sequence. l.33860 \aliasA {gamma}{Special}{gamma} ! Undefined control sequence. l.33861 \aliasA {lbeta}{Special}{lbeta} ! Undefined control sequence. l.33862 \aliasA {lchoose}{Special}{lchoose} ! Undefined control sequence. l.33863 \aliasA [65 {lfactorial}{Special}{lfactorial} ! Undefined control sequence. l.33864 \aliasA {lgamma}{Special}{lgamma} ! Undefined control sequence. l.33865 \aliasA {psigamma}{Special}{psigamma} ! Undefined control sequence. l.33866 \aliasA {trigamma}{Special}{trigamma} ! Undefined control sequence. l.33867 \keyword {math}{Special} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33869 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33872 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33874 \begin{Usage} [328]]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33890 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33892 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33893 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33894 \item[\code{a, b}] non-negative numeric vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33895 \item[\code{x, n}] numeric vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33896 \item[\code{k, deriv}] integer vectors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33897 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33898 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33900 \begin{Details} \relax ! Undefined control sequence. l.33901 The functions \code {beta} and \code{lbeta} return the beta function ! Undefined control sequence. l.33901 The functions \code{beta} and \code {lbeta} return the beta function ! Undefined control sequence. l.33903 \deqn {B(a,b) = \frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)}.}{} ! Missing $ inserted. $ l.33903 ... \frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)} .}{} ! Missing $ inserted. $ l.33903 ... \frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)} .}{} ! Missing $ inserted. $ l.33903 ... \frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)} .}{} ! Extra }, or forgotten $. \frac #1#2->{\begingroup #1\endgroup \over #2} l.33903 ... \frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)} .}{} ! Extra }, or forgotten $. l.33903 ...frac{\Gamma(a)\Gamma(b)}{\Gamma(a+b)}.} {} ! Undefined control sequence. l.33905 \deqn {B(a, b) = \int_0^1 t^{a-1} (1-t)^{b-1} dt}{} ! Undefined control sequence. l.33907 defined in \R {} for non-negative \code{a} and \code{b}, and is infinite ! Undefined control sequence. l.33907 defined in \R{} for non-negative \code {a} and \code{b}, and is infinite ! Undefined control sequence. l.33907 ...R{} for non-negative \code{a} and \code {b}, and is infinite ! Missing $ inserted. $ l.33909 Underfull \hbox (badness 1337) in paragraph at lines 33896--33909 []\OT1/cmr/m/n/10 integer vec-tors. The func-tions beta and lbeta re-turn the beta Underfull \hbox (badness 3547) in paragraph at lines 33896--33909 \OT1/cmr/m/n/10 func-tion and the nat-u-ral log-a-rithm of the beta func-tion, B(a,b) = Overfull \hbox (359.40034pt too wide) in paragraph at lines 33896--33909 \OT1/cmr/m/n/10 ^^@(\OML/cmm/m/it/10 a\OT1/cmr/m/n/10 )^^@(\OML/cmm/m/it/10 b\O T1/cmr/m/n/10 )$$[]$ ! Undefined control sequence. l.33910 The functions \code {gamma} and \code{lgamma} return the gamma function ! Undefined control sequence. l.33910 The functions \code{gamma} and \code {lgamma} return the gamma function ! Undefined control sequence. l.33911 \eqn {\Gamma(x)}{} and the natural logarithm of \emph{the absolute va... ! Missing $ inserted. $ l.33911 \eqn{\Gamma (x)}{} and the natural logarithm of \emph{the absolute va... ! Extra }, or forgotten $. l.33911 \eqn{\Gamma(x)} {} and the natural logarithm of \emph{the absolute va... ! Undefined control sequence. l.33914 \deqn {\Gamma(x) = \int_0^\infty t^{x-1} e^{-t} dt}{} ! Undefined control sequence. l.33915 for all real \code {x} except zero and negative integers (when ! Undefined control sequence. l.33916 \code {NaN} is returned). There will be a warning on possible loss of ! Undefined control sequence. l.33918 \eqn {10^{-8}}{})) to a negative integer less than \samp{-10}. ! Undefined control sequence. l.33918 ...) to a negative integer less than \samp {-10}. ! Missing $ inserted. $ l.33919 Underfull \hbox (badness 7186) in paragraph at lines 33910--33919 []\OT1/cmr/m/n/10 The func-tions gamma and lgamma re-turn the gamma func-tion Overfull \hbox (1268.38385pt too wide) in paragraph at lines 33910--33919 \OT1/cmr/m/n/10 ^^@(\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )[]\OML/cmm/m/it/10 andth enaturallogarithmof[]thegammafunction:Thegammafunctionisdefinedby\OT1/cmr/m/n/1 0 (\OML/cmm/m/it/10 AbramowitzandStegunsection\OT1/cmr/m/n/10 6\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; page\O T1/cmr/m/n/10 255)[][]\OML/cmm/m/it/10 forallrealxexceptzeroandnegativeintegers \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 when[]isreturned\OT1/cmr/m/n/10 )\OML/cmm/m/i t/10 :Therewillbeawarningonpossiblelossofprecisionforvalueswhicharetooclose\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 withinabout[][]\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 toanegativeintegerlessthan[]:$ ! Undefined control sequence. l.33920 \code {factorial(x)} (\eqn{x!}{} for non-negative integer \code{x}) ! Undefined control sequence. l.33920 \code{factorial(x)} (\eqn {x!}{} for non-negative integer \code{x}) ! Undefined control sequence. l.33920 ...qn{x!}{} for non-negative integer \code {x}) ! Undefined control sequence. l.33921 is defined to be \code {gamma(x+1)} and \code{lfactorial} to be ! Undefined control sequence. l.33921 ...fined to be \code{gamma(x+1)} and \code {lfactorial} to be ! Undefined control sequence. l.33922 \code [66 {lgamma(x+1)}. ! Undefined control sequence. l.33924 The functions \code {digamma} and \code{trigamma} return the first an... ! Undefined control sequence. l.33924 The functions \code{digamma} and \code {trigamma} return the first an... ! Undefined control sequence. l.33926 \code {psigamma(x, deriv)} (\code{deriv >= 0}) computes the ! Undefined control sequence. l.33926 \code{psigamma(x, deriv)} (\code {deriv >= 0}) computes the ! Undefined control sequence. l.33927 \code {deriv}-th derivative of \eqn{\psi(x)}{}. ! Undefined control sequence. l.33927 \code{deriv}-th derivative of \eqn {\psi(x)}{}. ! Missing $ inserted. $ l.33927 \code{deriv}-th derivative of \eqn{\psi (x)}{}. ! Extra }, or forgotten $. l.33927 ...e{deriv}-th derivative of \eqn{\psi(x)} {}. ! Undefined control sequence. l.33928 \deqn {\code{digamma(x)} = \psi(x) = \frac{d}{dx}\ln\Gamma(x) = ! Undefined control sequence. l.33928 \deqn{\code {digamma(x)} = \psi(x) = \frac{d}{dx}\ln\Gamma(x) = ! Undefined control sequence. l.33930 \eqn {\psi}{} and its derivatives, the \code{psigamma()} functions, are ! Undefined control sequence. l.33930 ...{\psi}{} and its derivatives, the \code {psigamma()} functions, are ! Undefined control sequence. l.33933 derivatives (\code {deriv = 2:4}) have occasionally been called ! Missing $ inserted. $ l.33935 Underfull \hbox (badness 10000) in paragraph at lines 33924--33935 []\OT1/cmr/m/n/10 The func-tions digamma and trigamma re-turn the first and Underfull \hbox (badness 10000) in paragraph at lines 33924--33935 \OT1/cmr/m/n/10 sec-ond deriva-tives of the log-a-rithm of the gamma func-tion. Underfull \hbox (badness 2582) in paragraph at lines 33924--33935 \OT1/cmr/m/n/10 psigamma(x, de-riv) (de-riv >= 0) com-putes the deriv-th deriva -tive of Overfull \hbox (977.173pt too wide) in paragraph at lines 33924--33935 \OML/cmm/m/it/10 \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )[]\OML/cm m/m/it/10 :[][] []anditsderivatives; the[]functions; areoftencalledthe\OT1/cmr/ m/n/10 `\OML/cmm/m/it/10 polygamma[]functions; e:g: []inAbramowitzandStegun\OT1 /cmr/m/n/10 (\OML/cmm/m/it/10 section\OT1/cmr/m/n/10 6\OML/cmm/m/it/10 :\OT1/cm r/m/n/10 4\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; page\OT1/cmr/m/ n/10 260); \OML/cmm/m/it/10 andhigherderivatives\OT1/cmr/m/n/10 ([])\OML/cmm/m/ it/10 haveoccasionallybeencalled\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 tetragamma[]; \OT1/cmr/m/n/10 `\OML/cmm/m/it/10 pentagamma[]; and\OT1/cmr/m/n/10 `\OML/cmm/m /it/10 hexagamma[]:$ ! Undefined control sequence. l.33936 The functions \code {choose} and \code{lchoose} return binomial ! Undefined control sequence. l.33936 The functions \code{choose} and \code {lchoose} return binomial ! Undefined control sequence. l.33938 \code {choose(n, k)} is defined for all real numbers \eqn{n}{} and in... ! Undefined control sequence. l.33938 ...)} is defined for all real numbers \eqn {n}{} and integer ! Undefined control sequence. l.33939 \eqn {k}{}. For \eqn{k \ge 1}{} it is defined as ! Undefined control sequence. l.33939 \eqn{k}{}. For \eqn {k \ge 1}{} it is defined as ! Missing $ inserted. $ l.33939 \eqn{k}{}. For \eqn{k \ge 1}{} it is defined as ! Extra }, or forgotten $. l.33939 \eqn{k}{}. For \eqn{k \ge 1} {} it is defined as ! Undefined control sequence. l.33940 \eqn {n(n-1)\cdots(n-k+1) / k!}{}, ! Undefined control sequence. l.33941 as \eqn {1}{} for \eqn{k = 0}{} and as \eqn{0}{} for negative \eqn{k}{}. ! Undefined control sequence. l.33941 as \eqn{1}{} for \eqn {k = 0}{} and as \eqn{0}{} for negative \eqn{k}{}. ! Undefined control sequence. l.33941 as \eqn{1}{} for \eqn{k = 0}{} and as \eqn {0}{} for negative \eqn{k}{}. ! Undefined control sequence. l.33941 ...0}{} and as \eqn{0}{} for negative \eqn {k}{}. ! Undefined control sequence. l.33942 Non-integer values of \code {k} are rounded to an integer, with a war... ! Undefined control sequence. l.33943 \\{} \code {choose(*, k)} uses direct arithmetic (instead of ! Undefined control sequence. l.33944 \code {[l]gamma} calls) for small \code{k}, for speed and accuracy ! Undefined control sequence. l.33944 \code{[l]gamma} calls) for small \code {k}, for speed and accuracy ! Undefined control sequence. l.33945 reasons. Note the function \code {\LinkA{combn}{combn}} (package ! Undefined control sequence. l.33945 reasons. Note the function \code{\LinkA {combn}{combn}} (package ! Undefined control sequence. l.33946 \pkg {utils}) for enumeration of all possible combinations. ! Missing $ inserted. $ l.33947 Underfull \hbox (badness 10000) in paragraph at lines 33936--33947 []\OT1/cmr/m/n/10 The func-tions choose and lchoose re-turn bi-no-mial co-ef-fi -cients Underfull \hbox (badness 4217) in paragraph at lines 33936--33947 \OT1/cmr/m/n/10 and the log-a-rithms of their ab-so-lute val-ues. Note that cho ose(n, Underfull \hbox (badness 4765) in paragraph at lines 33936--33947 \OT1/cmr/m/n/10 k) is de-fined for all real num-bers n and in-te-ger k. For k $ \OMS/cmsy/m/n/10 ^^U Overfull \hbox (14.3513pt too wide) in paragraph at lines 33936--33947 \OT1/cmr/m/n/10 1[]\OML/cmm/m/it/10 itisdefinedas[][]; as\OT1/cmr/m/n/10 1[]\OM L/cmm/m/it/10 for[][]andas\OT1/cmr/m/n/10 0[]\OML/cmm/m/it/10 fornegativek[]:No n \OMS/cmsy/m/n/10 ^^@ Overfull \hbox (488.02985pt too wide) in paragraph at lines 33936--33947 [][]\OML/cmm/m/it/10 usesdirectarithmetic\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 inst eadof[]calls\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 forsmallk; forspeedandaccuracyrea sons:Notethefunction[]\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 package[]\OT1/cmr/m/n/1 0 )\OML/cmm/m/it/10 forenumerationofallpossiblecombinations:$ ! Undefined control sequence. l.33948 The \code {gamma}, \code{lgamma}, \code{digamma} and \code{trigamma} ! Undefined control sequence. l.33948 The \code{gamma}, \code {lgamma}, \code{digamma} and \code{trigamma} ! Undefined control sequence. l.33948 The \code{gamma}, \code{lgamma}, \code {digamma} and \code{trigamma} ! Undefined control sequence. l.33948 ...\code{lgamma}, \code{digamma} and \code {trigamma} ! Undefined control sequence. l.33949 functions are \LinkA {internal generic}{internal generic} \LinkA{prim... ! Undefined control sequence. l.33949 ...ernal generic}{internal generic} \LinkA {primitive}{primitive} fun... ! Undefined control sequence. l.33951 \code {\LinkA{Math}{S3groupGeneric}} group generic. ! Undefined control sequence. l.33951 \code{\LinkA {Math}{S3groupGeneric}} group generic. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33952 \end{Details} ! Missing } [72]inserted. } l.33952 \end{Details} ! Missing } inserted. } l.33952 \end{Details} ! Missing } inserted. } l.33952 \end{Details} ! Missing } inserted. } l.33952 \end{Details} ! Missing } inserted. } l.33952 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33954 \begin{Source} \relax ! Undefined control sequence. l.33955 \code {gamma}, \code{lgamma}, \code{beta} and \code{lbeta} are based on ! Undefined control sequence. l.33955 \code{gamma}, \code {lgamma}, \code{beta} and \code{lbeta} are based on ! Undefined control sequence. l.33955 \code{gamma}, \code{lgamma}, \code {beta} and \code{lbeta} are based on ! Undefined control sequence. l.33955 ...}, \code{lgamma}, \code{beta} and \code {lbeta} are based on ! Undefined control sequence. l.33959 \code {digamma}, \code{trigamma} and \code{psigamma} are based on ! Undefined control sequence. l.33959 \code{digamma}, \code {trigamma} and \code{psigamma} are based on ! Undefined control sequence. l.33959 \code{digamma}, \code{trigamma} and \code {psigamma} are based on ! Undefined control sequence. l.33963 ...actions on Mathematical Software} \bold {9(4)}, 494--502. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33965 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33967 \begin{References} \relax ! Undefined control sequence. l.33970 Wadsworth \& Brooks/Cole. (For \code {gamma} and \code{lgamma}.) ! Undefined control sequence. l.33970 ...rooks/Cole. (For \code{gamma} and \code {lgamma}.) ! Undefined control sequence. l.33974 \url {https://en.wikipedia.org/wiki/Abramowitz_and_Stegun} provides ! Missing $ inserted. $ l.33974 ...tps://en.wikipedia.org/wiki/Abramowitz_ and_Stegun} provides ! Extra }, or forgotten $. l.33974 ...kipedia.org/wiki/Abramowitz_and_Stegun} provides ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33977 \end{References} ! Missing $ inserted. $ l.33977 \end{References} ! Missing } inserted. } l.33977 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33979 \begin{SeeAlso} \relax ! Undefined control sequence. l.33980 \code {\LinkA{Arithmetic}{Arithmetic}} for simple, \code{\LinkA{sqrt}... ! Undefined control sequence. l.33980 \code{\LinkA {Arithmetic}{Arithmetic}} for simple, \code{\LinkA{sqrt}... ! Undefined control sequence. l.33980 ...thmetic}{Arithmetic}} for simple, \code {\LinkA{sqrt}{sqrt}} for ! Undefined control sequence. l.33980 ...}{Arithmetic}} for simple, \code{\LinkA {sqrt}{sqrt}} for ! Undefined control sequence. l.33981 ...aneous mathematical functions and \code {\LinkA{Bessel}{Bessel}} f... ! Undefined control sequence. l.33981 ...mathematical functions and \code{\LinkA {Bessel}{Bessel}} for the Underfull \hbox (badness 10000) in paragraph at lines 33972--33983 []\OT1/cmr/m/n/10 Abramowitz, M. and Ste-gun, I. A. (1972) \OT1/cmr/m/it/10 Han d- Underfull \hbox (badness 10000) in paragraph at lines 33972--33983 \OT1/cmr/m/it/10 book of Math-e-mat-i-cal Func-tions\OT1/cmr/m/n/10 . New York: Dover. Overfull \hbox (115.34146pt too wide) in paragraph at lines 33972--33983 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Abramowitz$[]\OML/cmm/m/it/10 nd[ ]tegunprovideslinkstothefulltextwhichisinpublicdomain:[] ! Undefined control sequence. l.33984 ...the incomplete gamma function see \code {\LinkA{pgamma}{pgamma}}. ! Undefined control sequence. l.33984 ...omplete gamma function see \code{\LinkA {pgamma}{pgamma}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33985 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33987 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33988 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.33997 # # gamma has 1st order poles at 0, -1, -2, ... ! You can't use `macro parameter character #' in vertical mode. l.33997 ## gamma has 1st order poles at 0, -1, -2, ... [329] [67]] ! You can't use `macro parameter character #' in horizontal mode. l.33998 # # this will generate loss of precision warnings, so turn off ! You can't use `macro parameter character #' in horizontal mode. l.33998 ## this will generate loss of precision warnings, so turn off ! You can't use `macro parameter character #' in horizontal mode. l.34013 dy <- diff(y) / dx # finite difference ! Undefined control sequence. l.34016 ...2) nm2 else paste(nm, nm2, sep = " ==\n ") ! You can't use `macro parameter character #' in vertical mode. l.34027 # # "Extended" Pascal triangle: ! You can't use `macro parameter character #' in vertical mode. l.34027 ## "Extended" Pascal triangle: ! Undefined control sequence. l.34031 cat("\n ") ! You can't use `macro parameter character #' in vertical mode. l.34034 # # R code version of choose() [simplistic; warning for k < 0]: ! You can't use `macro parameter character #' in vertical mode. l.34034 ## R code version of choose() [simplistic; warning for k < 0]: ! You can't use `macro parameter character #' in vertical mode. l.34041 # # Binomial theorem for n = 1/2 ; ! You can't use `macro parameter character #' in vertical mode. l.34041 ## Binomial theorem for n = 1/2 ; ! You can't use `macro parameter character #' in horizontal mode. l.34042 # # sqrt(1+x) = (1+x)^(1/2) = sum_{k=0}^Inf choose(1/2, k) * x^k : ! You can't use `macro parameter character #' in horizontal mode. l.34042 ## sqrt(1+x) = (1+x)^(1/2) = sum_{k=0}^Inf choose(1/2, k) * x^k : ! Missing $ inserted. $ l.34042 ## sqrt(1+x) = (1+x)^ (1/2) = sum_{k=0}^Inf choose(1/2, k) * x^k : ! You can't use `macro parameter character #' in math mode. l.34043 k <- 0:10 # 10 is sufficient for ~ 9 digit precision: ! Missing $ inserted. $ l.34046 Underfull \hbox (badness 3503) in paragraph at lines 34041--34046 []\OT1/cmr/m/n/10 Binomial the-o-rem for n = 1/2 ; sqrt(1+x) = (1+x)$[]1\OML/c mm/m/it/10 =\OT1/cmr/m/n/10 2) = ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34048 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34049 \end{Examples} ! Undefined control sequence. l.34050 \HeaderA {split}{Divide into Groups and Reassemble}{split} ! Undefined control sequence. l.34051 \methaliasA {split.data.frame}{split}{split.data.frame} ! Undefined control sequence. l.34052 \methaliasA {split.default}{split}{split.default} ! Undefined control sequence. l.34053 \aliasA {split<\Rdash{}}{split}{split<.Rdash.} ! Undefined control sequence. l.34053 \aliasA{split<\Rdash {}}{split}{split<.Rdash.} ! Undefined control sequence. l.34054 \methaliasA {split<\Rdash{}.data.frame}{split}{split<.Rdash..data.frame} ! Undefined control sequence. l.34054 \methaliasA{split<\Rdash {}.data.frame}{split}{split<.Rdash..data.frame} ! Undefined control sequence. l.34055 \methaliasA {split<\Rdash{}.default}{split}{split<.Rdash..default} ! Undefined control sequence. l.34055 \methaliasA{split<\Rdash {}.default}{split}{split<.Rdash..default} ! Undefined control sequence. l.34056 \aliasA {unsplit}{split}{unsplit} ! Undefined control sequence. l.34057 \keyword {category}{split} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34059 \begin{Description} \relax ! Undefined control sequence. l.34060 \code {split} divides the data in the vector \code{x} into the groups ! Undefined control sequence. l.34060 ...t} divides the data in the vector \code {x} into the groups ! Undefined control sequence. l.34061 defined by \code {f}. The replacement forms replace values ! Undefined control sequence. l.34062 corresponding to such a division. \code {unsplit} reverses the effec... ! Undefined control sequence. l.34063 \code {split}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34064 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34066 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 34050--34067 \OT1/cmr/m/n/10 splitDivide into Groups and Re-assem-ble-split Underfull \hbox (badness 10000) in paragraph at lines 34050--34067 \OT1/cmr/m/n/10 split.data.framesplitsplit.data.frame split.defaultsplitsplit.d efault Underfull \hbox (badness 10000) in paragraph at lines 34050--34067 \OT1/cmr/m/n/10 split for immediate help. ... l.34075 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34077 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34078 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34079 \item[\code{x}] vector or data frame containing values to be divided... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34080 \item[\code{f}] a `factor' in the sense that \code{\LinkA{as.factor}... ! Undefined control sequence. l.34080 ...{f}] a `factor' in the sense that \code {\LinkA{as.factor}{as.fact... ! Undefined control sequence. l.34080 ...`factor' in the sense that \code{\LinkA [73 {as.factor}{as.factor}(f)} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34083 \item[\code{drop}] logical indicating if levels that do not occur sh... ! Undefined control sequence. l.34084 (if \code {f} is a \code{factor} or a list). ! Undefined control sequence. l.34084 (if \code{f} is a \code {factor} or a list). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34085 \item[\code{value}] a list of vectors or data frames compatible with a ! Undefined control sequence. l.34086 splitting of \code {x}. Recycling applies if the lengths do not match. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34087 \item[\code{sep}] character string, passed to \code{\LinkA{interacti... ! Undefined control sequence. l.34087 ...sep}] character string, passed to \code {\LinkA{interaction}{inter... ! Undefined control sequence. l.34087 ...haracter string, passed to \code{\LinkA {interaction}{interaction}... ! Undefined control sequence. l.34088 case where \code {f} is a \code{\LinkA{list}{list}}. ! Undefined control sequence. l.34088 case where \code{f} is a \code {\LinkA{list}{list}}. ! Undefined control sequence. l.34088 case where \code{f} is a \code{\LinkA {list}{list}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34089 \item[\code{lex.order}] logical, passed to \code{\LinkA{interaction}... ! Undefined control sequence. l.34089 ...de{lex.order}] logical, passed to \code {\LinkA{interaction}{inter... ! Undefined control sequence. l.34089 ...order}] logical, passed to \code{\LinkA {interaction}{interaction}... ! Undefined control sequence. l.34090 \code {f} is a list. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34091 \item[\code{...}] further potential arguments passed to methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34092 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34093 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34095 \begin{Details} \relax ! Undefined control sequence. l.34096 \code {split} and \code{split<-} are generic functions with default and ! Undefined control sequence. l.34096 \code{split} and \code {split<-} are generic functions with default and ! Undefined control sequence. l.34097 \code {data.frame} methods. The data frame method can also be used to ! Undefined control sequence. l.34101 \code {unsplit} works with lists of vectors or data frames (assumed to [330 [68]] ! Undefined control sequence. l.34102 ...tible structure, as if created by \code {split}). It puts ! Undefined control sequence. l.34103 ...ws back in the positions given by \code {f}. In the data ! Undefined control sequence. l.34105 vectors from the elements of \code {value}. ! Undefined control sequence. l.34107 \code {f} is recycled as necessary and if the length of \code{x} is not ! Undefined control sequence. l.34107 ...as necessary and if the length of \code {x} is not ! Undefined control sequence. l.34108 a multiple of the length of \code {f} a warning is printed. ! Undefined control sequence. l.34110 Any missing values in \code {f} are dropped together with the ! Undefined control sequence. l.34111 corresponding values of \code {x}. ! Undefined control sequence. l.34113 The default method calls \code {\LinkA{interaction}{interaction}} whe... ! Undefined control sequence. l.34113 The default method calls \code{\LinkA {interaction}{interaction}} whe... ! Undefined control sequence. l.34113 ...A{interaction}{interaction}} when \code {f} is a ! Undefined control sequence. l.34114 \code {\LinkA{list}{list}}. If the levels of the factors contain \sa... ! Undefined control sequence. l.34114 \code{\LinkA {list}{list}}. If the levels of the factors contain \sa... ! Undefined control sequence. l.34114 ...the levels of the factors contain \samp {.} ! Undefined control sequence. l.34115 ... not be split as expected, unless \code {sep} is set to ! Undefined control sequence. l.34116 string not present in the factor \code {\LinkA{levels}{levels}}. ! Undefined control sequence. l.34116 ... not present in the factor \code{\LinkA {levels}{levels}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34117 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34119 \begin{Value} ! Undefined control sequence. l.34120 The value returned from \code {split} is a list of vectors containing ! Undefined control sequence. l.34122 the levels of \code {f} (after converting to a factor, or if already a ! Undefined control sequence. l.34123 factor and \code {drop = TRUE}, dropping unused levels). ! Undefined control sequence. l.34125 ...ms return their right hand side. \code {unsplit} ! Undefined control sequence. l.34126 ... a vector or data frame for which \code {split(x, f)} equals ! Undefined control sequence. l.34127 \code {value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34129 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explan]ation. Type H for immediate help. ... l.34131 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34135 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34137 \begin{SeeAlso} \relax ! Undefined control sequence. l.34138 \code {\LinkA{cut}{cut}} to categorize numeric values. ! Undefined control sequence. l.34138 \code{\LinkA {cut}{cut}} to categorize numeric values. ! Undefined control sequence. l.34140 \code {\LinkA{strsplit}{strsplit}} to split strings. ! Undefined control sequence. l.34140 \code{\LinkA {strsplit}{strsplit}} to split strings. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34141 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34143 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34144 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.34154 # ## Calculate 'z-scores' by group (standardize to mean zero, varianc... ! You can't use `macro parameter character #' in vertical mode. l.34154 ## # Calculate 'z-scores' by group (standardize to mean zero, varianc... ! You can't use `macro parameter character #' in vertical mode. l.34154 ### Calculate 'z-scores' by group (standardize to mean zero, varianc... ! You can't use `macro parameter character #' in vertical mode. l.34157 # or ! You can't use `macro parameter character #' in vertical mode. l.34162 # and check that the within-group std dev is indeed one ! You can't use `macro parameter character #' in vertical mode. l.34167 # ## data frame variation ! You can't use `macro parameter character #' in vertical mode. l.34167 ## # data frame variation ! You can't use `macro parameter character #' in vertical mode. l.34167 ### data frame variation ! You can't use `macro parameter character #' in vertical mode. l.34169 # # Notice that assignment form is not used since a variable is being... ! You can't use `macro parameter character #' in vertical mode. l.34169 ## Notice that assignment form is not used since a variable is being... ! Missing $ inserted. $ l.34177 Underfull \hbox (badness 10000) in paragraph at lines 34171--34177 []\OT1/cmr/m/n/10 g <- airquality$\OML/cmm/m/it/10 Monthl < \OMS/cmsy/m/n/10 ^^ @\OML/cmm/m/it/10 split\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 airquality; g\OT1/cmr/ m/n/10 )\OML/cmm/m/it/10 l < Underfull \hbox (badness 10000) in paragraph at lines 34171--34177 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 lapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 l; transform; Oz:Z \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 scale\OT1/cmr/m/n/10 (\OML/ cmm/m/it/10 Ozone\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 aq\OT1/cmr/m/n/10 2 \OML/cm m/m/it/10 < ! You can't use `macro parameter character #' in vertical mode. l.34179 # ## Split a matrix into a list by columns ! You can't use `macro parameter character #' in vertical mode. l.34179 ## # Split a matrix into a list by columns ! You can't use `macro parameter character #' in vertical mode. l.34179 ### Split a matrix into a list by columns ! Missing $ inserted. $ l.34180 ma <- cbind(x = 1:10, y = (-4:5)^ 2) ! Missing $ inserted. $ l.34182 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34184 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34185 \end{Examples} ! Undefined control sequence. l.34186 \HeaderA {sprintf}{Use C-style String Formatting Commands}{sprintf} ! Undefined control sequence. l.34187 \aliasA {gettextf}{sprintf}{gettextf} ! Undefined control sequence. l.34188 \keyword {print}{sprintf} ! Undefined control sequence. l.34189 \keyword {character}{sprintf} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34191 \begin{Description} \relax ! Undefined control sequence. l.34192 A wrapper for the C function \code {sprintf}, that returns a character ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34194 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34196 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34201 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34203 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34204 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34205 \item[\code{fmt}] a character vector of format strings, each of up t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34206 \item[\code{...}] values to be passed into \code{fmt}. Only logical, ! Undefined control sequence. l.34206 ...de{...}] values to be passed into \code {fmt}. Only logical, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34209 \item[\code{domain}] see \code{\LinkA{gettext}{gettext}}. ! Undefined control sequence. l.34209 \item[\code{domain}] see \code {\LinkA{gettext}{gettext}}. ! Undefined control sequence. l.34209 \item[\code{domain}] see \code{\LinkA {gettext}{gettext}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34210 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34211 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34213 \begin{Details} \relax ! Undefined control sequence. l.34214 \code {sprintf} is a wrapper for the system \code{sprintf} C-library ! Undefined control sequence. l.34214 ...intf} is a wrapper for the system \code {sprintf} C-library ! Undefined control sequence. l.34216 passed match the format supplied, and \R {}'s special values (\code{NA}, ! Undefined control sequence. l.34216 ...plied, and \R{}'s special values (\code {NA}, ! Undefined control sequence. l.34217 \code {Inf}, \code{-Inf} and \code{NaN}) are handled correctly. ! Undefined control sequence. l.34217 \code{Inf}, \code {-Inf} and \code{NaN}) are handled correctly. ! Undefined control sequence. l.34217 \code{Inf}, \code{-Inf} and \code {NaN}) are handled correctly. [331 [69 [74]] ! Undefined control sequence. l.34219 \code {gettextf} is a convenience function which provides C-style ! Undefined control sequence. l.34222 The arguments (including \code {fmt}) are recycled if possible a whole ! Undefined control sequence. l.34226 hence some types (e.g., \code {"symbol"} or \code{"language"}, see ! Undefined control sequence. l.34226 ...e types (e.g., \code{"symbol"} or \code {"language"}, see ! Undefined control sequence. l.34227 \code {\LinkA{typeof}{typeof}}) are not allowed. ! Undefined control sequence. l.34227 \code{\LinkA {typeof}{typeof}}) are not allowed. ! Undefined control sequence. l.34234 The string \code {fmt} contains normal characters, ! Undefined control sequence. l.34237 \code {...}. The allowed conversion specifications start with a ! Undefined control sequence. l.34238 \code {\%} and end with one of the letters in the set ! Undefined control sequence. l.34239 \code {aAdifeEgGosxX\%}. These letters denote the following types: ! Undefined control sequence. \code {d}, \code {i}, \code {o}, \code {x}, \code {X} l.34243 ...\code{i}, \code{o}, \code{x}, \code{X}] Integer ! Undefined control sequence. \code {d}, \code {i}, \code {o}, \code {x}, \code {X} l.34243 ...\code{i}, \code{o}, \code{x}, \code{X}] Integer ! Undefined control sequence. \code {d}, \code {i}, \code {o}, \code {x}, \code {X} l.34243 ...\code{i}, \code{o}, \code{x}, \code{X}] Integer ! Undefined control sequence. \code {d}, \code {i}, \code {o}, \code {x}, \code {X} l.34243 ...\code{i}, \code{o}, \code{x}, \code{X}] Integer ! Undefined control sequence. ...de {i}, \code {o}, \code {x}, \code {X} l.34243 ...\code{i}, \code{o}, \code{x}, \code{X}] Integer ! Undefined control sequence. l.34244 value, \code {o} being octal, ! Undefined control sequence. l.34245 \code {x} and \code{X} being hexadecimal (using the same case for ! Undefined control sequence. l.34245 \code{x} and \code {X} being hexadecimal (using the same case for ! Undefined control sequence. l.34246 \code {a-f} as the code). Numeric variables with exactly integer ! Undefined control sequence. l.34247 ...l be coerced to integer. Formats \code {d} and \code{i} ! Undefined control sequence. l.34247 ...to integer. Formats \code{d} and \code {i} ! Undefined control sequence. l.34249 \code {0}, \code{1} or \code{NA}. ! Undefined control sequence. l.34249 \code{0}, \code {1} or \code{NA}. ! Undefined control sequence. l.34249 \code{0}, \code{1} or \code {NA}. ! Undefined control sequence. \code {f} l.34251 \item[\code{f}] Double precision value, in ``\bold{f}ixed ! Undefined control sequence. l.34251 ...{f}] Double precision value, in ``\bold {f}ixed ! Undefined control sequence. l.34255 are converted to \code {NA}, \code{NaN} or (perhaps a sign followed ! Undefined control sequence. l.34255 are converted to \code{NA}, \code {NaN} or (perhaps a sign followed ! Undefined control sequence. l.34256 by) \code {Inf}. ! ]Undefined control sequence. \code {e}, \code {E} l.34258 \item[\code{e}, \code{E}] Double precision value, in ! Undefined control sequence. \code {e}, \code {E} l.34258 \item[\code{e}, \code{E}] Double precision value, in ! Undefined control sequence. l.34259 ``\bold {e}xponential'' decimal notation of the ! Undefined control sequence. l.34260 form \code {[-]m.ddde[+-]xx} or \code{[-]m.dddE[+-]xx}. ! Undefined control sequence. l.34260 form \code{[-]m.ddde[+-]xx} or \code {[-]m.dddE[+-]xx}. ! Undefined control sequence. \code {g}, \code {G} l.34262 \item[\code{g}, \code{G}] Double precision value, in \code{\%e} or ! Undefined control sequence. \code {g}, \code {G} l.34262 \item[\code{g}, \code{G}] Double precision value, in \code{\%e} or ! Undefined control sequence. l.34262 ...de{G}] Double precision value, in \code {\%e} or ! Undefined control sequence. l.34263 \code {\%E} format if the exponent is less than -4 or greater than or ! Undefined control sequence. l.34264 equal to the precision, and \code {\%f} format otherwise. ! Undefined control sequence. l.34266 ...nificant} digits here, whereas in \code {\%f, \%e}, it is ! Undefined control sequence. \code {a}, \code {A} l.34269 \item[\code{a}, \code{A}] Double precision value, in binary notation ! Undefined control sequence. \code {a}, \code {A} l.34269 \item[\code{a}, \code{A}] Double precision value, in binary notation ! Undefined control sequence. l.34270 of the form \code {[-]0xh.hhhp[+-]d}. This is a binary fraction ! Undefined control sequence. l.34274 ...on-finite values are converted to \code {NA}, ! Undefined control sequence. l.34275 \code {NaN} or (perhaps a sign followed by) \code{Inf}. Format ! Undefined control sequence. l.34275 ...} or (perhaps a sign followed by) \code {Inf}. Format ! Undefined control sequence. l.34276 \code {\%a} uses lower-case for \code{x}, \code{p} and the hex ! Undefined control sequence. l.34276 \code{\%a} uses lower-case for \code {x}, \code{p} and the hex ! Undefined control sequence. l.34276 ...%a} uses lower-case for \code{x}, \code {p} and the hex ! Undefined control sequence. l.34277 values: format \code {\%A} uses upper-case. ! Undefined control sequence. l.34281 to make the leading \code {h} always zero or one, this is not [332 [70]] ! Undefined control sequence. \code {s} l.34288 \item[\code{s}] Character string. Character \code{NA}s are ! Undefined control sequence. l.34288 ...{s}] Character string. Character \code {NA}s are ! Undefined control sequence. l.34289 converted to \code {"NA"}. ! Undefined control sequence. \code {\%} l.34291 \item[\code{\%}] Literal \code{\%} (none of the extra formatting ! Undefined control sequence. l.34291 \item[\code{\%}] Literal \code {\%} (none of the extra formatting ! Undefined control sequence. l.34297 Conversion by \code {\LinkA{as.character}{as.character}} is used for ... ! Undefined control sequence. l.34297 Conversion by \code{\LinkA {as.character}{as.character}} is used for ... ! Undefined control sequence. l.34298 arguments with \code {s} and by \code{\LinkA{as.double}{as.double}} for ! Undefined control sequence. l.34298 arguments with \code{s} and by \code {\LinkA{as.double}{as.double}} for ! Undefined control sequence. l.34298 ...ments with \code{s} and by \code{\LinkA {as.double}{as.double}} for ! Undefined control sequence. l.34299 non-double arguments with \code {f, e, E, g, G}. NB: the length is ! Undefined control sequence. l.34302 once, so if \code {length(fmt) > 1} then all elements must expect the ! Undefined control sequence. l.34305 In addition, between the initial \code {\%} and the terminating ! Undefined control sequence. \code {m.n} l.34310 \item[\code{m.n}] Two numbers separated by a period, denoting the ! Undefined control sequence. l.34311 field width (\code {m}) and the precision (\code{n}). ! Undefined control sequence. l.34311 ...dth (\code{m}) and the precision (\code {n}). ! Undefined control sequence. \code {-} l.34312 \item[\code{-}] Left adjustment of converted argument in its field. ! Undefined control sequence. \code {+} l.34313 \item[\code{+}] Always print number with sign: by default only ! Undefined control sequence. \code {0} l.34316 \item[\code{0}] For numbers, pad to the field width with leading ! Undefined control sequence. \code {\#} l.34319 \item[\code{\#}] specifies ``alternate output'' for numbers, its ! Undefined control sequence. l.34321 For \code {x} or \code{X}, \code{0x} or \code{0X} will be prefixed ! Undefined control sequence. l.34321 For \code{x} or \code {X}, \code{0x} or \code{0X} will be prefixed ! Undefined control sequence. l.34321 For \code{x} or \code{X}, \code {0x} or \code{0X} will be prefixed ! Undefined control sequence. l.34321 ...code{x} or \code{X}, \code{0x} or \code {0X} will be prefixed ! Undefined control sequence. l.34322 to a non-zero result. For \code {e}, \code{e}, \code{f}, \code{g} ! Undefined control sequence. l.34322 to a non-zero result. For \code{e}, \code {e}, \code{f}, \code{g} ! Undefined control sequence. l.34322 ... result. For \code{e}, \code{e}, \code {f}, \code{g} ! Undefined control sequence. l.34322 ...For \code{e}, \code{e}, \code{f}, \code {g} ! Un Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75 for immediate help. ... l.34354 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34356 \begin{Value} ! Undefined control sequence. l.34358 element of \code {fmt} or any character argument is declared as UTF-8, ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34362 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34364 \begin{Section} {Warning} ! Undefined control sequence. l.34365 ...at string is passed down the OS's \code {sprintf} function, and ! Undefined control sequence. l.34366 ...ts can cause the latter to crash the \R {} process . \R{} ! Undefined control sequence. l.34366 ... latter to crash the \R{} process . \R {} [333]] ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34372 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34374 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34376 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34378 \begin{References} \relax ! Undefined control sequence. l.34384 can be found at \url {https://developer.r-project.org/Portability.html}. ! Undefined control sequence. l.34386 \command {man sprintf} on a Unix-alike system. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34387 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34389 \begin{SeeAlso} \relax ! Undefined control sequence. l.34390 \code {\LinkA{formatC}{formatC}} for a way of formatting vectors of n... ! Undefined control sequence. l.34390 \code{\LinkA {formatC}{formatC}} for a way of formatting vectors of n... ! Undefined control sequence. l.34393 \code {\LinkA{paste}{paste}} for another way of creating a vector com... ! Undefined control sequence. l.34393 \code{\LinkA {paste}{paste}} for another way of creating a vector com... ! Undefined control sequence. l.34396 \code {\LinkA{gettext}{gettext}} for the mechanisms for the automated... ! Undefined control sequence. l.34396 \code{\LinkA {gettext}{gettext}} for the mechanisms for the automated... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34398 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34400 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34401 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.34402 # # be careful with the format: most things in R are floats ! You can't use `macro parameter character #' in horizontal mode. l.34402 ## be careful with the format: most things in R are floats ! You can't use `macro parameter character #' in horizontal mode. l.34403 # # only integer-valued reals get coerced to integer. ! You can't use `macro parameter character #' in horizontal mode. l.34403 ## only integer-valued reals get coerced to integer. ! You can't use `macro parameter character #' in vertical mode. l.34409 # # use a literal % : ! You can't use `macro parameter character #' in vertical mode. l.34409 ## use a literal % : ! You can't use `macro parameter character #' in vertical mode. l.34413 # # various formats of pi : ! You can't use `macro parameter character #' in vertical mode. l.34413 ## various formats of pi : Overfull \hbox (192.27908pt too wide) in paragraph at lines 34415--34429 []\OT1/cmr/m/n/10 sprintf("sprintf("sprintf("sprintf("sprintf("sprintf("sprintf ("sprintf("sprintf("sprintf("sprintf("sprintf("sprintf("sprintf(" ! You can't use `macro parameter character #' in vertical mode. l.34430 # # no truncation: ! You can't use `macro parameter character #' in vertical mode. l.34430 ## no truncation: ! You can't use `macro parameter character #' in vertical mode. l.34433 # # re-use one argument three times, show difference between %x and %X ! You can't use `macro parameter character #' in vertical mode. l.34433 ## re-use one argument three times, show difference between %x and %X ! You can't use `macro parameter character #' in vertical mode. l.34438 # # More sophisticated: ! You can't use `macro parameter character #' in vertical mode. l.34438 ## More sophisticated: ! You can't use `macro parameter character #' in vertical mode. l.34443 # # Platform-dependent bad example from qdapTools 1.0.0: ! You can't use `macro parameter character #' in vertical mode. l.34443 ## Platform-dependent bad example from qdapTools 1.0.0: ! You can't use `macro parameter character #' in horizontal mode. l.34444 # # may pad with spaces or zeroes. ! You can't use `macro parameter character #' in horizontal mode. l.34444 ## may pad with spaces or zeroes. ! You can't use `macro parameter character #' in vertical mode. l.34450 # # Using arguments out of order ! You can't use `macro parameter character #' in vertical mode. l.34450 ## Using arguments out of order ! You can't use `macro parameter character #' in vertical mode. l.34453 # # Using asterisk for width or precision ! You can't use `macro parameter character #' in vertical mode. l.34453 ## Using asterisk for width or precision ! You can't use `macro parameter character #' in vertical mode. l.34456 # # Asterisk and argument re-use, 'e' example reiterated: ! You can't use `macro parameter character #' in vertical mode. l.34456 ## Asterisk and argument re-use, 'e' example reiterated: ! You can't use `macro parameter character #' in vertical mode. l.34459 # # re-cycle arguments ! You can't use `macro parameter character #' in vertical mode. l.34459 ## re-cycle arguments ! You can't use `macro parameter character #' in vertical mode. l.34462 # # binary output showing rounding/representation errors ! You can't use `macro parameter character #' in vertical mode. l.34462 ## binary output showing rounding/representation errors ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34465 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34466 \end{Examples} ! Undefined control sequence. l.34467 \HeaderA {sQuote}{Quote Text}{sQuote} ! Undefined control sequence. l.34468 \aliasA {dQuote}{sQuote}{dQuote} ! Undefined control sequence. l.34469 \keyword {character}{sQuote} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34471 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34474 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34476 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34481 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34483 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34484 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34485 \item[\code{x}] an \R{} object, to be coerced to a character vector. ! Undefined control sequence. l.34485 \item[\code{x}] an \R {} object, to be coerced to a character vector. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34486 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34487 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34489 \begin{Details} \relax [334 [76] ! Undefined control sequence. l.34515 What rendering is used depend on the \code {\LinkA{options}{options}}... ! Undefined control sequence. l.34515 ...ring is used depend on the \code{\LinkA {options}{options}} settin... ! Undefined control sequence. l.34516 \code {useFancyQuotes}. If this is \code{FALSE} then the undirectional ! Undefined control sequence. l.34516 \code{useFancyQuotes}. If this is \code {FALSE} then the undirectional ! Undefined control sequence. l.34517 ...tation style is used. If this is \code {TRUE} (the default), ! Undefined control sequence. l.34520 except \code {C}): if set to \code{"UTF-8"} UTF-8 markup is used ! Undefined control sequence. l.34520 except \code{C}): if set to \code {"UTF-8"} UTF-8 markup is used ! Undefined control sequence. l.34521 ...er the current locale). If set to \code {"TeX"}, TeX-style ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34532 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34534 \begin{Value} ! Undefined control sequence. l.34535 ...cter vector of the same length as \code {x} (after any coercion) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34537 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34539 \begin{References} \relax ! Undefined control sequence. l.34541 \url {https://www.cl.cam.ac.uk/~mgk25/ucs/quotes.html} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34542 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34544 \begin{SeeAlso} \relax ! Undefined control sequence. l.34545 \LinkA {Quotes}{Quotes} for quoting \R{} code. ! Undefined control sequence. l.34545 \LinkA{Quotes}{Quotes} for quoting \R {} code. ! Undefined control sequence. l.34547 \code {\LinkA{shQuote}{shQuote}} for quoting OS commands. ! Undefined control sequence. l.34547 \code{\LinkA {shQuote}{shQuote}} for quoting OS commands. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34548 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type ]H for immediate help. ... l.34550 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34551 \begin{ExampleCode} ! Undefined control sequence. l.34555 cat("\ndistinguish plain", sQuote("single"), "and", ! Undefined control sequence. l.34556 dQuote("double"), "quotes\n ") ! Undefined control sequence. l.34558 cat("\ndistinguish fancy", sQuote("single"), "and", ! Undefined control sequence. l.34559 dQuote("double"), "quotes\n ") ! Undefined control sequence. l.34561 cat("\ndistinguish TeX", sQuote("single"), "and", ! Undefined control sequence. l.34562 dQuote("double"), "quotes\n ") ! Missing $ inserted. $ l.34563 if(l10n_ info()$`Latin-1`) { ! Undefined control sequence. l.34564 options(useFancyQuotes = c("\xab ", "\xbb", "\xbf", "?")) ! Undefined control sequence. l.34564 ...ptions(useFancyQuotes = c("\xab", "\xbb ", "\xbf", "?")) ! Undefined control sequence. l.34564 ...seFancyQuotes = c("\xab", "\xbb", "\xbf ", "?")) ! Undefined control sequence. l.34565 cat("\n ", sQuote("guillemet"), "and", ! Undefined control sequence. l.34566 ... dQuote("Spanish question"), "styles\n ") ! Missing $ inserted. $ l.34567 } else if(l10n_ info()$`UTF-8`) { ! Undefined control sequence. l.34568 options(useFancyQuotes = c("\xc 2\xab", "\xc2\xbb", "\xc2\xbf", "... ! Undefined control sequence. l.34568 options(useFancyQuotes = c("\xc2\xab ", "\xc2\xbb", "\xc2\xbf", "... ! Undefined control sequence. l.34568 ...ons(useFancyQuotes = c("\xc2\xab", "\xc 2\xbb", "\xc2\xbf", "?")) ! Undefined control sequence. l.34568 ...seFancyQuotes = c("\xc2\xab", "\xc2\xbb ", "\xc2\xbf", "?")) ! Undefined control sequence. l.34568 ...Quotes = c("\xc2\xab", "\xc2\xbb", "\xc 2\xbf", "?")) ! Undefined control sequence. l.34568 ...s = c("\xc2\xab", "\xc2\xbb", "\xc2\xbf ", "?")) ! Undefined control sequence. l.34569 cat("\n ", sQuote("guillemet"), "and", ! Undefined control sequence. l.34570 ... dQuote("Spanish question"), "styles\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34573 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34574 \end{Examples} ! Undefined control sequence. l.34575 \HeaderA {srcfile}{References to Source Files and Code}{srcfile} ! Undefined control sequence. l.34576 \aliasA {.isOpen}{srcfile}{.isOpen} ! Undefined control sequence. l.34577 \aliasA {as.character.srcref}{srcfile}{as.character.srcref} ! Undefined control sequence. l.34578 \aliasA {close.srcfile}{srcfile}{close.srcfile} ! Undefined control sequence. l.34579 \aliasA {close.srcfilealias}{srcfile}{close.srcfilealias} ! Undefined control sequence. l.34580 \aliasA {getSrcLines}{srcfile}{getSrcLines} ! Undefined control sequence. l.34581 \aliasA {open.srcfile}{srcfile}{open.srcfile} ! Undefined control sequence. l.34582 \aliasA {open.srcfilealias}{srcfile}{open.srcfilealias} ! Undefined control sequence. l.34583 \aliasA {open.srcfilecopy}{srcfile}{open.srcfilecopy} ! Undefined control sequence. l.34584 \aliasA {print.srcfile}{srcfile}{print.srcfile} ! Undefined control sequence. l.34585 \aliasA {print.srcref}{srcfile}{print.srcref} ! Undefined control sequence. l.34586 \aliasA {srcfile-class}{srcfile}{srcfile.Rdash.class} ! Undefined control sequence. l.34587 \aliasA {srcfilealias}{srcfile}{srcfilealias} ! Undefined control sequence. l.34588 \aliasA {srcfilealias-class}{srcfile}{srcfilealias.Rdash.class} ! Undefined control sequence. l.34589 \aliasA {srcfilecopy}{srcfile}{srcfilecopy} ! Undefined control sequence. l.34590 \aliasA {srcfilecopy-class}{srcfile}{srcfilecopy.Rdash.class} ! Undefined control sequence. l.34591 \aliasA {srcref}{srcfile}{srcref} ! Undefined control sequence. l.34592 \aliasA {srcref-class}{srcfile}{srcref.Rdash.class} ! Undefined control sequence. l.34593 \aliasA {summary.srcfile}{srcfile}{summary.srcfile} ! Undefined control sequence. l.34594 \aliasA {summary.srcref}{srcfile}{summary.srcref} ! Undefined control sequence. l.34595 \keyword {debugging}{srcfile} ! Undefined control sequence. l.34596 \keyword {utilities}{srcfile} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34598 \begin{Description} \relax ! Undefined control sequence. l.34600 with ``source references'' (\code {"srcref"}), i.e., references to ! Undefined control sequence. l.34602 ...s typically available in interactive \R {} sessions, ! Undefined control sequence. l.34603 namely when \code {\LinkA{options}{options}(keep.source = TRUE)}. ! Undefined control sequence. l.34603 namely when \code{\LinkA {options}{options}(keep.source = TRUE)}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34604 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34606 \begin{Usage} Underfull \hbox (badness 2042) in paragraph at lines 34547--34607 []\OT1/cmr/m/n/10 shQuoteshQuote for quot-ing OS com-mands. op <- op- Underfull \hbox (badness 1533) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 op-tions(useFancyQuotes = FALSE) cat("plain", sQuote("single"), "and", Underfull \hbox (badness 1584) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 sQuote("guillemet"), "and", dQuote("Spanish ques-tion"), "style s") else Underfull \hbox (badness 1077) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 if(l10n$[]\OML/cmm/m/it/10 nfo\OT1/cmr/m/n/10 ()$`UTF-8`) op-t ions(useFancyQuotes = c("2", "2", "2", "?")) Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 as.character.srcrefsrcfileas.character.srcref close.srcfilesrcf ileclose.srcfile Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 close.srcfilealiassrcfileclose.srcfilealias get-Sr-cLi-ness-r-c -fi-leget-Sr-cLines Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 open.srcfilesrcfileopen.srcfile open.srcfilealiassrcfileopen.sr cfilealias Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 open.srcfilecopysrcfileopen.srcfilecopy print.srcfilesrcfilepri nt.srcfile Underfull \hbox (badness 2582) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 print.srcrefsrcfileprint.srcref srcfile-classsrcfilesrcfile.Rda sh.class sr-c-filealiassr- Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 c-filesr-c-filealias srcfilealias-classsrcfilesrcfilealias.Rdas h.class sr-c-file-copy-s-r-c- Underfull \hbox (badness 10000) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 filesr-c-file-copy srcfilecopy-classsrcfilesrcfilecopy.Rdash.cl ass sr-cref-s-r-c-filesr-cref Underfull \hbox (badness 1515) in paragraph at lines 34547--34607 \OT1/cmr/m/n/10 srcref-classsrcfilesrcref.Rdash.class sum-mary.srcfilesrcfilesu mmary.srcfile sum- [335] Overfull \hbox (11.99689pt too wide) in paragraph at lines 34628--34628 []\OT1/cmtt/m/n/10 srcfile(filename, encoding = getOption("encoding"), Enc = "u nknown")[] Overfull \hbox (11.99689pt too wide) in paragraph at lines 34628--34628 []\OT1/cmtt/m/n/10 srcfilecopy(filename, lines, timestamp = Sys.time(), isFile = FALSE)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34629 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34631 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34632 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34633 \item[\code{filename}] The name of a file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34634 \item[\code{encoding}] The character encoding to assume for the file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34635 \item[\code{Enc}] The encoding with which to make strings: see the ! Undefined control sequence. l.34636 \code {encoding} argument of \code{\LinkA{parse}{parse}}. ! Undefined control sequence. l.34636 \code{encoding} argument of \code {\LinkA{parse}{parse}}. ! Undefined control sequence. l.34636 \code{encoding} argument of \code{\LinkA {parse}{parse}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34637 \item[\code{lines}] A character vector of source lines. Other \R{}... ! Undefined control sequence. l.34637 ...acter vector of source lines. Other \R {} objects ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34639 \item[\code{timestamp}] The timestamp to use on a copy of a file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34640 \item[\code{isFile}] Is this \code{srcfilecopy} known to come from ... ! Undefined control sequence. l.34640 \item[\code{isFile}] Is this \code {srcfilecopy Underfull \hbox (badness 10000) in paragraph at lines 6762--6768 []@textrm The @texttt \out{@textttsl literal@texttt }[] @textrm macro would usu -ally be used within the @textsl text @textrm part of [77} known to come from ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34641 \item[\code{srcfile}] A \code{srcfile} object. ! Undefined control sequence. l.34641 \item[\code{srcfile}] A \code {srcfile} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34642 \item[\code{first, last, line}] Line numbers. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34643 \item[\code{lloc}] A vector of four, six or eight values giving a s... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34645 \item[\code{x, object, con}] An object of the appropriate class. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34646 \item[\code{useSource}] Whether to read the \code{srcfile} to obtai... ! Undefined control sequence. l.34646 ...{useSource}] Whether to read the \code {srcfile} to obtain the ! Undefined control sequence. l.34647 text of a \code {srcref}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34648 \item[\code{to}] An optional second \code{srcref} object to mark th... ! Undefined control sequence. l.34648 \item[\code{to}] An optional second \code {srcref} object to mark th... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34650 \item[\code{...}] Additional arguments to the methods; these will b... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34651 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34652 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34654 \begin{Details} \relax ! Undefined control sequence. l.34657 The \code {srcfile} function produces an object of class ! Undefined control sequence. l.34658 \code {srcfile}, which contains the name and directory of a source code ! Undefined control sequence. l.34661 saved; see \code {\LinkA{file}{file}} for a discussion of encodings, and ! Undefined control sequence. l.34661 saved; see \code{\LinkA {file}{file}} for a discussion of encodings, and ! Undefined control sequence. l.34662 \code {\LinkA{iconvlist}{iconvlist}} for a list of allowable encoding... ! Undefined control sequence. l.34662 \code{\LinkA {iconvlist}{iconvlist}} for a list of allowable encoding... ! Undefined control sequence. l.34664 The \code {srcfilecopy} function produces an object of the descendant ! Undefined control sequence. l.34665 class \code {srcfilecopy}, which saves the source lines in a character ! Undefined control sequence. l.34666 vector. It copies the value of the \code {isFile} argument, to help [336]] ! Undefined control sequence. l.34670 The \code {srcfilealias} function produces an object of the descendant ! Undefined control sequence. l.34671 class \code {srcfilealias}, which gives an alternate name to another ! Undefined control sequence. l.34672 ... is produced by the parser when a \code {\#line} directive ! Undefined control sequence. l.34675 The \code {getSrcLines} function reads the specified lines from ! Undefined control sequence. l.34676 \code {srcfile}. ! Undefined control sequence. l.34678 The \code {srcref} function produces an object of class ! Undefined control sequence. l.34679 \code {srcref}, which describes a range of characters in a ! Undefined control sequence. l.34680 \code {srcfile}. ! Undefined control sequence. l.34681 The \code {lloc} value gives the following values: ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34682 \begin{alltt} c(first_line, first_byte, last_line, last_byte, first_c... ! Missing $ inserted. $ l.34682 \begin{alltt}c(first_ line, first_byte, last_line, last_byte, first_c... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34684 \end{alltt} ! Missing $ inserted. $ l.34684 \end{alltt} Overfull \hbox (43.3625pt too wide) in paragraph at lines 34678--34685 \OT1/cmr/m/n/10 c(first$[]\OML/cmm/m/it/10 ine; first[]yte; last[]ine; last[]yt e; first[]olumn; last[]olumn; first[]arsed; last[]arsed\OT1/cmr/m/n/10 )$ ! Undefined control sequence. l.34690 elements 7, 8) may differ if a \code {\#line} directive is used in ! Undefined control sequence. l.34695 Methods are defined for \code {print}, \code{summary}, \code{open}, ! Undefined control sequence. l.34695 ...ods are defined for \code{print}, \code {summary}, \code{open}, ! Undefined control sequence. l.34695 ...for \code{print}, \code{summary}, \code {open}, ! Undefined control sequence. l.34696 and \code {close} for classes \code{srcfile} and \code{srcfilecopy}. ! Undefined control sequence. l.34696 and \code{close} for classes \code {srcfile} and \code{srcfilecopy}. ! Undefined control sequence. l.34696 ...e} for classes \code{srcfile} and \code {srcfilecopy}. ! Undefined control sequence. l.34697 The \code {open} method opens its internal \code{\LinkA{file}{file}} ... ! Undefined control sequence. l.34697 ...e{open} method opens its internal \code {\LinkA{file}{file}} conne... ! Undefined control sequence. l.34697 ... method opens its internal \code{\LinkA {file}{file}} connection at ! Undefined control sequence. l.34701 Methods are defined for \code {print}, \code{summary} and ! Undefined control sequence. l.34701 ...ods are defined for \code{print}, \code {summary} and ! Undefined control sequence. l.34702 \code {as.character} for class \code{srcref}. The \code{as.character} ! Undefined control sequence. l.34702 \code{as.character} for class \code {srcref}. The \code{as.character} ! Undefined control sequence. l.34702 ...er} for class \code{srcref}. The \code {as.character} ! Undefined control sequence. l.34704 ...ponding to the reference. If the \code {to} argument is given, ! Undefined control sequence. l.34705 it should be a second \code {srcref} that follows the first, in the ! Undefined control sequence. l.34709 class \code {srcfilecopy}, the lines are taken from the saved copy ! Undefined control sequence. l.34712 \code {srcref} record (i.e., elements 1 and 3) are used. If an error ! Undefined control sequence. l.34714 \code {} will be returned instead, ! Undefined control sequence. l.34715 indicating the \code {line:column} ranges of the first and last ! Undefined control sequence. l.34716 character. The \code {summary} method defaults to this type of ! Undefined control sequence. l.34719 Lists of \code {srcref} objects may be attached to expressions as the ! Undefined control sequence. l.34720 \code {"srcref"} attribute. (The list of \code{srcref} objects shoul... ! Undefined control sequence. l.34720 ...srcref"} attribute. (The list of \code {srcref} objects should be... ! Undefined control sequence. l.34722 \code {\LinkA{print.default}{print.default}} using the associated \co... ! Undefined control sequence. l.34722 \code{\LinkA {print.default}{print.default}} using the associated \co... ! Undefined control sequence. l.34722 ...nt.default}} using the associated \code {srcref}. To ! Undefined control sequence. l.34723 see deparsed code instead, call \code {\LinkA{print}{print}} with arg... ! Undefined control sequence. l.34723 ...eparsed code instead, call \code{\LinkA {print}{print}} with argument ! Undefined control sequence. l.34724 \code {useSource = FALSE}. If a \code{srcref} object ! Undefined control sequence. l.34724 \code{useSource = FALSE}. If a \code {srcref} object ! Undefined control sequence. l.34725 is printed with \code {useSource = FALSE}, the \code{} ! Undefined control sequence. l.34725 ...ith \code{useSource = FALSE}, the \code {} ! Undefined control sequence. l.34728 \code {.isOpen} is intended for internal use: it checks whether the ! Undefined control sequence. l.34729 connection associated with a \code {srcfile} object is open. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34730 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34732 \begin{Value} ! Undefined control sequence. l.34733 \code {srcfile} returns a \code{srcfile} object. ! Undefined control sequence. l.34733 \code{srcfile} returns a \code {srcfile} object. ! Undefined control sequence. l.34735 \code {srcfilecopy} returns a \code{srcfilecopy} object. ! Undefined control sequence. l.34735 \code{srcfilecopy} returns a \code {srcfilecopy} object. ! Undefined control sequence. l.34737 \code {getSrcLines} returns a character vector of source code lines. ! Undefined control sequence. l.34739 \code {srcref} returns a \code{srcref} object. ! Undefined control sequence. l.34739 \code{srcref} returns a \code {srcref} object. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34740 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34742 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34744 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34746 \begin{SeeAlso} \relax ! Undefined control sequence. l.34747 \code {\LinkA{getSrcFilename}{getSrcFilename}} for extracting informa... ! Undefined control sequence. l.34747 \code{\LinkA {getSrcFilename}{getSrcFilename}} for extracting informa... ! Undefined control sequence. l.34748 reference, or \code {\LinkA{removeSource}{removeSource}} to remove it... ! Undefined control sequence. l.34748 reference, or \code{\LinkA {removeSource}{removeSource}} to remove it... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34750 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34752 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34753 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.34754 # has timestamp ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34761 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34762 \end{Examples} ! Undefined control sequence. l.34763 \HeaderA {standardGeneric}{Formal Method System -- Dispatching S4 Met... ! Undefined control sequence. l.34764 \keyword {programming}{standardGeneric} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [78 l.34766 \begin{Description} \relax ! Undefined control sequence. l.34767 The function \code {standardGeneric} initiates dispatch of S4 ! Undefined control sequence. l.34769 \pkg {methods} package. Usually, calls to this function are ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34771 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34773 \begin{Usage} [337]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34777 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34779 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34780 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34781 \item[\code{f}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34784 \item[\code{fdef}] ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34788 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34789 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34791 \begin{Details} \relax ! Undefined control sequence. l.34792 \code {standardGeneric} dispatches the method defined for a generic ! Undefined control sequence. l.34793 function named \code {f}, using the actual arguments in the frame fro... ! Undefined control sequence. l.34796 The argument \code {fdef} is inserted (automatically) when dispatching ! Undefined control sequence. l.34802 For more, use the \pkg {methods} package, and see the documentation in ! Undefined control sequence. l.34803 \code {\LinkA{GenericFunctions}{GenericFunctions}}. ! Undefined control sequence. l.34803 \code{\LinkA {GenericFunctions}{GenericFunctions}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34804 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34806 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34808 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34810 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34818 \end{References} ! Undefined control sequence. l.34819 \HeaderA {startsWith}{Does String Start or End With Another String?}{... ! Undefined control sequence. l.34820 \aliasA {endsWith}{startsWith}{endsWith} ! Undefined control sequence. l.34821 \keyword {character}{startsWith} ! Undefined control sequence. l.34822 \keyword {utilities}{startsWith} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34824 \begin{Description} \relax ! Undefined control sequence. l.34825 Determines if entries of \code {x} start or end with string (entries of) ! Undefined control sequence. l.34826 \code {prefix} or \code{suffix} respectively, where strings are ! Undefined control sequence. l.34826 \code{prefix} or \code {suffix} respectively, where strings are Underfull \hbox (badness 2753) in paragraph at lines 34815--34828 \OT1/cmr/m/n/10 orig-i-nal S4 ver-sion.) startsWith-Does String Start or End W ith ! Undefined control sequence. l.34829 \code {startsWith()} is equivalent to but much faster than ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34830 \begin{alltt} substring(x, 1, nchar(prefix)) == prefix\end{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34830 ... 1, nchar(prefix)) == prefix\end{alltt} Underfull \hbox (badness 2150) in paragraph at lines 34829--34831 []\OT1/cmr/m/n/10 startsWith() is equiv-a-lent to but much faster than sub-stri ng(x, 1, ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34832 or also \begin{alltt} grepl("^", x)\end{alltt} ! Missing $ inserted. $ l.34832 or also \begin{alltt}grepl("^ ", x)\end{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34832 ...{alltt}grepl("^", x)\end{alltt} ! Missing $ inserted. $ l.34832 ...{alltt}grepl("^", x)\end{alltt} ! Undefined control sequence. l.34833 where \code {prefix} is ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Underfull \hbox (badness 10000) in paragraph at lines 6904--6908 []@textrm As of R ver-sion 3.2.0, a num-ber of macros are de-fined in the file Underfull \hbox (badness 4686) in paragraph at lines 6904--6908 @textrm `@texttt share/Rd/macros/system.Rd[]@textrm '[] of the R source or home di-rec-tory, and these will [79 l.34835 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34837 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34842 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34844 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34845 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34846 \item[\code{x}] vector of \code{\LinkA{character}{character}} string... ! Undefined control sequence. l.34846 \item[\code{x}] vector of \code {\LinkA{character}{character}} string... ! Undefined control sequence. l.34846 \item[\code{x}] vector of \code{\LinkA {character}{character}} string... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34848 \item[\code{prefix, suffix}] \code{\LinkA{character}{character}} vec... ! Undefined control sequence. l.34848 \item[\code{prefix, suffix}] \code {\LinkA{character}{character}} vec... ! Undefined control sequence. l.34848 \item[\code{prefix, suffix}] \code{\LinkA {character}{character}} vec... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34849 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34850 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34852 \begin{Details} \relax ! Undefined control sequence. l.34854 \code {prefix} or \code{suffix} is of length one, and is further ! Undefined control sequence. l.34854 \code{prefix} or \code {suffix} is of length one, and is further ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34856 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34858 \begin{Value} ! Undefined control sequence. l.34859 A \code {\LinkA{logical}{logical}} vector, of ``common length'' of \c... ! Undefined control sequence. l.34859 A \code{\LinkA {logical}{logical}} vector, of ``common length'' of \c... ! Undefined control sequence. l.34859 ...} vector, of ``common length'' of \code {x} ! Undefined control sequence. l.34860 and \code {prefix} (or \code{suffix}), i.e., of the longer of the two ! Undefined control sequence. l.34860 and \code{prefix} (or \code {suffix}), i.e., of the longer of the two ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34863 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34865 \begin{SeeAlso} \relax ! Undefined control sequence. l.34866 \code {\LinkA{grepl}{grepl}}, \code{\LinkA{substring}{substring}}; th... ! Undefined control sequence. l.34866 \code{\LinkA {grepl}{grepl}}, \code{\LinkA{substring}{substring}}; th... ! Undefined control sequence. l.34866 \code{\LinkA{grepl}{grepl}}, \code {\LinkA{substring}{substring}}; th... ! Undefined control sequence. l.34866 \code{\LinkA{grepl}{grepl}}, \code{\LinkA {substring}{substring}}; th... ! Undefined control sequence. l.34867 matching functions \code {\LinkA{charmatch}{charmatch}} and \code{\Li... ! Undefined control sequence. l.34867 matching functions \code{\LinkA {charmatch}{charmatch}} and \code{\Li... ! Undefined control sequence. l.34867 ...\LinkA{charmatch}{charmatch}} and \code {\LinkA{pmatch}{pmatch}} ! Undefined control sequence. l.34867 ...charmatch}{charmatch}} and \code{\LinkA {pmatch}{pmatch}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34869 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34871 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34872 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.34873 startsWith(search(), "package:") # typically at least two FALSE, now... ! You can't use `macro parameter character #' in horizontal mode. l.34876 "blau blüht der Enzian")# non-ASCII ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaT]eX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34885 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34886 \end{Examples} ! Undefined control sequence. l.34887 \HeaderA {Startup}{Initialization at Start of an R Session}{Startup} ! Undefined control sequence. l.34888 \aliasA {.First}{Startup}{.First} ! Undefined control sequence. l.34889 \methaliasA {.First.sys}{Startup}{.First.sys} ! Undefined control sequence. l.34890 \aliasA {.OptRequireMethods}{Startup}{.OptRequireMethods} ! Undefined control sequence. l.34891 \aliasA {.Renviron}{Startup}{.Renviron} ! Undefined control sequence. l.34892 \aliasA {.Rprofile}{Startup}{.Rprofile} ! Undefined control sequence. l.34893 \aliasA {Renviron}{Startup}{Renviron} ! Undefined control sequence. l.34894 \methaliasA {Renviron.site}{Startup}{Renviron.site} ! Undefined control sequence. l.34895 \aliasA {Rprofile}{Startup}{Rprofile} ! Undefined control sequence. l.34896 \methaliasA {Rprofile.site}{Startup}{Rprofile.site} ! Undefined control sequence. l.34897 \aliasA {R\_DEFAULT\_PACKAGES}{Startup}{R.Rul.DEFAULT.Rul.PACKAGES} ! Undefined control sequence. l.34898 \aliasA {R\_ENVIRON}{Startup}{R.Rul.ENVIRON} ! Undefined control sequence. l.34899 \aliasA {R\_ENVIRON\_USER}{Startup}{R.Rul.ENVIRON.Rul.USER} ! Undefined control sequence. l.34900 \aliasA {R\_PROFILE}{Startup}{R.Rul.PROFILE} ! Undefined control sequence. l.34901 \aliasA {R\_PROFILE\_USER}{Startup}{R.Rul.PROFILE.Rul.USER} ! Undefined control sequence. l.34902 \keyword {environment}{Startup} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34904 \begin{Description} \relax ! Undefined control sequence. l.34905 In \R {}, the startup mechanism is as follows. Underfull \hbox (badness 2173) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 "blau blht der En-zian") non-ASCII x2 <- cbind( startsWith(x1, "b"), Underfull \hbox (badness 10000) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 .First.sysStartup.First.sys .Op-tRe-quireMeth-od-sStartup.OptRe quireMethods Underfull \hbox (badness 10000) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 .Ren-vi-ron-Startup.Renviron .Rpro-fileStartup.Rprofile Ren- Underfull \hbox (badness 10000) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 vi-ron-Star-tupRen-v-i-ron Ren-v-i-ron.siteStartupRenviron.site Underfull \hbox (badness 10000) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 Rpro-fileStar-tupRpro-file Rpro-file.siteStartupRprofile.site Underfull \hbox (badness 10000) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 R[]DEFAULT[]PACKAGESStartupR.Rul.DEFAULT.Rul.PACKAGES Overfull \hbox (73.49414pt too wide) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 R[]ENVIRONStartupR.Rul.ENVIRON R[]ENVIRON[]USERStartupR.Rul.ENV IRON.Rul.USER Overfull \hbox (61.82751pt too wide) in paragraph at lines 34875--34906 \OT1/cmr/m/n/10 R[]PROFILEStartupR.Rul.PROFILE R[]PROFILE[]USERStartupR.Rul.PRO FILE.Rul.USER [338] ! Undefined control sequence. l.34907 Unless \option {--no-environ} was given on the command line, \R{} ! Undefined control sequence. l.34907 ...iron} was given on the command line, \R {} ! Undefined control sequence. l.34910 environment variable \env {R\_ENVIRON}; if this is unset, ! Undefined control sequence. l.34911 \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron.site} is used (... ! Undefined control sequence. l.34911 \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron.site} is used (... ! Undefined control sequence. l.34911 \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc/Renviron.site} is used (... ! Undefined control sequence. l.34913 ... user file can be specified by the \env {R\_ENVIRON\_USER} ! Undefined control sequence. l.34915 \file {.Renviron} in the current or in the user's home directory (in ! Undefined control sequence. l.34918 Then \R {} searches for the site-wide startup profile file of \R{} code ! Undefined control sequence. l.34918 ...he site-wide startup profile file of \R {} code ! Undefined control sequence. l.34919 unless the command line option \option {--no-site-file} was given. The ! Undefined control sequence. l.34920 ...ile is taken from the value of the \env {R\_PROFILE} ! Undefined control sequence. l.34921 environment variable (after \LinkA {tilde expansion}{tilde expansion}... ! Undefined control sequence. l.34922 is unset, the default is \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc... ! Undefined control sequence. l.34922 is unset, the default is \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc... ! Undefined control sequence. l.34922 is unset, the default is \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc... ! Undefined control sequence. l.34925 This code is sourced into the \pkg {base} package. Users need to be ! Undefined control sequence. l.34926 ...intentionally overwrite objects in \pkg {base}, and it ! Undefined control sequence. l.34927 is normally advisable to use \code {\LinkA{local}{local}} if code nee... ! Undefined control sequence. l.34927 is normally advisable to use \code{\LinkA {local}{local}} if code nee... ! Undefined control sequence. l.34930 Then, unless \option {--no-init-file} was given, \R{} searches for a ... ! Undefined control sequence. l.34930 ...s \option{--no-init-file} was given, \R {} searches for a user ! Undefined control sequence. l.34931 profile, a file of \R {} code. The path of this file can be specifie... ! Undefined control sequence. l.34932 the \env {R\_PROFILE\_USER} environment variable (and ! Undefined control sequence. l.34933 \LinkA {tilde expansion}{tilde expansion} will be performed). If thi... ! Undefined control sequence. l.34934 called \file {.Rprofile} is searched for in the current directory or in ! Undefined control sequence. l.34939 \pkg {base} package is loaded, so objects in other packages need to be ! Undefined control sequence. l.34940 referred to by e.g.~\code {utils::dump.frames} or after explicitly ! Undefined control sequence. l.34943 \R {} then loads a saved image of the user workspace from \file{.RData} ! Undefined control sequence. l.34943 ... image of the user workspace from \file {.RData} ! Undefined control sequence. l.34945 \option {--no-restore-data} or \option{--no-restore} was specified on ! Undefined control sequence. l.34945 \option{--no-restore-data} or \option {--no-restore} was specified on ! Undefined control sequence. l.34948 Next, if a function \code {.First} is found on the search path, ! Undefined control sequence. l.34949 it is executed as \code {.First()}. Finally, function ! Undefined control sequence. l.34950 \code {.First.sys()} in the \pkg{base} package is run. This calls ! Undefined control sequence. l.34950 \code{.First.sys()} in the \pkg {base} package is run. This calls ! Undefined control sequence. l.34951 \code {\LinkA{require}{require}} to attach the default packages speci... ! Undefined control sequence. l.34951 \code{\LinkA {require}{require}} to attach the default packages speci... ! Undefined control sequence. l.34952 \code {\LinkA{options}{options}("defaultPackages")}. If the \pkg{met... ! Undefined control sequence. l.34952 \code{\LinkA {options}{options}("defaultPackages")}. If the \pkg{met... ! Undefined control sequence. l.34952 ...ions}("defaultPackages")}. If the \pkg {methods} ! Undefined control sequence. l.34954 \code {.OptRequireMethods()}) so that namespace initializations such ! Undefined control sequence. l.34957 A function \code {.First} (and \code{\LinkA{.Last}{.Last}}) can be de... ! Undefined control sequence. l.34957 A function \code{.First} (and \code {\LinkA{.Last}{.Last}}) can be de... ! Undefined control sequence. l.34957 A function \code{.First} (and \code{\LinkA {.Last}{.Last}}) can be de... ! Undefined control sequence. l.34958 appropriate \file {.Rprofile} or \file{Rprofile.site} files or have ! Undefined control sequence. l.34958 appropriate \file{.Rprofile} or \file {Rprofile.site} files or have ! Undefined control sequence. l.34959 been saved in \file {.RData}. If you want a different set of packages ! Undefined control sequence. l.34961 \code {\LinkA{options}{options}} in the \file{.Rprofile} or \file{Rpr... ! Undefined control sequence. l.34961 \code{\LinkA {options}{options}} in the \file{.Rprofile} or \file{Rpr... ! Undefined control sequence. l.34961 ...{\LinkA{options}{options}} in the \file {.Rprofile} or \file{Rprof... ! Undefined control sequence. l.34961 ...ions}} in the \file{.Rprofile} or \file {Rprofile.site} ! Undefined control sequence. l.34962 file. For example, \code {options(defaultPackages = character())} will ! Undefined control sequence. l.34963 ...xtra packages on startup (only the \pkg {base} package) (or ! Undefined control sequence. l.34964 set \code {R\_DEFAULT\_PACKAGES=NULL} as an environment variable before ! Undefined control sequence. l.34965 running \R {}). Using \code{options(defaultPackages = "")} or ! Undefined control sequence. l.34965 running \R{}). Using \code {options(defaultPackages = "")} or ! Undefined control sequence. l.34966 \code {R\_DEFAULT\_PACKAGES=""} enforces the R \emph{system} default. ! Undefined control sequence. l.34969 ...cified by the environment variable \env {R\_HISTFILE} (default ! Undefined control sequence. l.34970 \file {.Rhistory [80} in the current directory) unless ! Undefined control sequence. l.34971 \option {--no-restore-history} or \option{--no-restore} was specified. ! Undefined control sequence. l.34971 \option{--no-restore-history} or \option {--no-restore} was specified. ! Undefined control sequence. l.34973 The command-line option \option {--vanilla} implies ! Undefined control sequence. l.34974 \option {--no-site-file}, \option{--no-init-file}, ! Undefined control sequence. l.34974 \option{--no-site-file}, \option {--no-init-file}, ! Undefined control sequence. l.34975 \option {--no-environ} and (except for \command{R CMD}) ! Undefined control sequence. l.34975 ...{--no-environ} and (except for \command {R CMD}) ! Undefined control sequence. l.34976 \option {--no-restore} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34977 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34979 \begin{Details} \relax ! Undefined control sequence. l.34982 ...d \emph{profile files} which contain \R {} code. [339]] Overfull \hbox (3.59178pt too wide) in paragraph at lines 7074--7077 []@textrm Another is the Eclipse IDE with the Stat-ET plu-gin ([][]@texttt http ://www.walware.de/goto/statet[][][]@textrm ), Underfull \hbox (badness 3029) in paragraph at lines 7081--7083 []@textrm Some R front-ends pro-vide edit-ing sup-port for `@texttt .Rd[]@textr m '[] files, for ex-am-ple RStu-dio Chapter 3 [81 ! Undefined control sequence. l.34985 lines starting with \code {\#}, or lines of the form ! Undefined control sequence. l.34986 \code {\var{name}=\var{value}}. The latter sets the environmental ! Undefined control sequence. l.34986 \code{\var {name}=\var{value}}. The latter sets the environmental ! Undefined control sequence. l.34986 \code{\var{name}=\var {value}}. The latter sets the environmental ! Undefined control sequence. l.34987 variable \code {\var{name}} to \code{\var{value}}, overriding an ! Undefined control sequence. l.34987 variable \code{\var {name}} to \code{\var{value}}, overriding an ! Undefined control sequence. l.34987 variable \code{\var{name}} to \code {\var{value}}, overriding an ! Undefined control sequence. l.34987 variable \code{\var{name}} to \code{\var {value}}, overriding an ! Undefined control sequence. l.34988 existing value. If \code {\var{value}} contains an expression of the ! Undefined control sequence. l.34988 existing value. If \code{\var {value}} contains an expression of the ! Undefined control sequence. l.34989 form \code {\$\{foo-bar\}}, the value is that of the environmental ! Undefined control sequence. l.34990 variable \code {foo} if that exists and is set to a non-empty value, ! Undefined control sequence. l.34991 otherwise \code {bar}. (If it is of the form \code{\$\{foo\}}, the ! Undefined control sequence. l.34991 ...code{bar}. (If it is of the form \code {\$\{foo\}}, the ! Undefined control sequence. l.34992 default is \code {""}.) This construction can be nested, so \code{bar} ! Undefined control sequence. l.34992 ...is construction can be nested, so \code {bar} ! Undefined control sequence. l.34993 can be of the same form (as in \code {\$\{foo-\$\{bar-blah\}\}}). No... ! Undefined control sequence. l.34994 ...braces are essential: for example \code {\$HOME} will not be inter... ! Undefined control sequence. l.34996 Leading and trailing white space in \code {\var{value}} are stripped. ! Undefined control sequence. l.34996 ... and trailing white space in \code{\var {value}} are stripped. ! Undefined control sequence. l.34997 \code {\var{value}} is then processed in a similar way to a Unix shell: ! Undefined control sequence. l.34997 \code{\var {value}} is then processed in a similar way to a Unix shell: ! Undefined control sequence. l.35002 files \file {Renviron.site} and \file{Rprofile.site} are looked for ! Undefined control sequence. l.35002 files \file{Renviron.site} and \file {Rprofile.site} are looked for ! Undefined control sequence. l.35004 e.g.~\file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc/i386/Renviron.site}. ! Undefined control sequence. l.35004 e.g.~\file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc/i386/Renviron.site}. ! Undefined control sequence. l.35004 e.g.~\file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc/i386/Renviron.site}. ! Undefined control sequence. l.35005 And e.g.~\file {.Renviron.i386} will be used in preference ! Undefined control sequence. l.35006 to \file {.Renviron}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.35007 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35009 \begin{Note} \relax ! Undefined control sequence. l.35011 .... Attempting to do so can crash the \R {} process. ! Undefined control sequence. l.35013 On Unix versions of \R {} here is also a file ! Undefined control sequence. l.35014 \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron} which is read ... ! Undefined control sequence. l.35014 \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron} which is read ... ! Undefined control sequence. l.35014 \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc/Renviron} which is read ... ! Undefined control sequence. l.35015 ...ontains environment variables set by \R {} ! Undefined control sequence. l.35018 \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron} itself. Note ... ! Undefined control sequence. l.35018 \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron} itself. Note ... ! Undefined control sequence. l.35018 \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc/Renviron} itself. Note ... ! Undefined control sequence. l.35019 distinct from \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron.s... ! Undefined control sequence. l.35019 distinct from \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/etc/Renviron.s... ! Undefined control sequence. l.35019 distinct from \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/etc/Renviron.s... ! Undefined control sequence. l.35022 they do not apply to \command {R.app} on macOS. ! Undefined control sequence. l.35024 \command {R CMD check} and \command{R CMD build} do not always read the ! Undefined control sequence. l.35024 \command{R CMD check} and \command {R CMD build} do not always read the ! Undefined control sequence. l.35026 \samp {Renviron} files. The location of these can be controlled by the ! Undefined control sequence. l.35027 environment variables \env {R\_CHECK\_ENVIRON} and \env{R\_BUILD\_ENV... ! Undefined control sequence. l.35027 ...iables \env{R\_CHECK\_ENVIRON} and \env {R\_BUILD\_ENVIRON}. ! Undefined control sequence. l.35029 \samp {Renviron} file; otherwise, files \file{\textasciitilde{}/.R/ch... ! Undefined control sequence. l.35029 ...{Renviron} file; otherwise, files \file {\textasciitilde{}/.R/chec... ! Undefined control sequence. l.35030 \file {\textasciitilde{}/.R/build.Renviron} or sub-architecture-speci... ! Undefined control sequence. l.35033 If you want \file {\textasciitilde{}/.Renviron} or \file{\textasciiti... ! Undefined control sequence. l.35033 ...e{\textasciitilde{}/.Renviron} or \file {\textasciitilde{}/.Rprofi... ! Undefined control sequence. l.35034 child \R {} processes (such as those run by \command{R CMD check} and ! Undefined control sequence. l.35034 ...rocesses (such as those run by \command {R CMD check} and ! Undefined control sequence. l.35035 \command {R CMD build}), set the appropriate environment variable ! Undefined control sequence. l.35036 \env {R\_ENVIRON\_USER} or \env{R\_PROFILE\_USER} to (if possible, wh... ! Undefined control sequence. l.35036 \env{R\_ENVIRON\_USER} or \env {R\_PROFILE\_USER} to (if possible, wh... ! Undefined control sequence. l.35037 is not on Windows) \code {""} or to the name of a non-existent file. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35038 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35040 \begin{SeeAlso} \relax ! Undefined control sequence. l.35042 \file {rw-FAQ} Q2.14. It can be found from a running \R{} by ! Undefined control sequence. l.35042 ....14. It can be found from a running \R {} by ! Undefined control sequence. l.35043 \code {Sys.getenv("R\_USER")}. ! Undefined control sequence. l.35045 \code {\LinkA{.Last}{.Last}} for final actions at the close of an \R{... ! Undefined control sequence. l.35045 \code{\LinkA {.Last}{.Last}} for final actions at the close of an \R{... ! Undefined control sequence. l.35045 ...for final actions at the close of an \R {} session. ! Undefined control sequence. l.35046 \code {\LinkA{commandArgs}{commandArgs}} for accessing the command li... ! Undefined control sequence. l.35046 \code{\LinkA {commandArgs}{commandArgs}} for accessing the command li... ! Undefined control sequence. l.35050 \code {\LinkA{X11}{X11}} and \code{\LinkA{quartz}{quartz}}. ! Undefined control sequence. l.35050 \code{\LinkA {X11}{X11}} and \code{\LinkA{quartz}{quartz}}. ! Undefined control sequence. l.35050 \code{\LinkA{X11}{X11}} and \code {\LinkA{quartz}{quartz}}. ! Undefined control sequence. l.35050 \code{\LinkA{X11}{X11}} and \code{\LinkA {quartz}{quartz}}. ! Undefined control sequence. l.35054 \LinkA {Memory}{Memory}. ! Undefined control sequence. l.35056 \code {\LinkA{readRenviron}{readRenviron}} to read \file{.Renviron} f... ! Undefined control sequence. l.35056 \code{\LinkA {readRenviron}{readRenviron}} to read \file{.Renviron} f... ! Undefined control sequence. l.35056 ...dRenviron}{readRenviron}} to read \file {.Renviron} files. ! Undefined control sequence. l.35058 For profiling code, see \code {\LinkA{Rprof}{Rprof}}. ! Undefined control sequence. l.35058 For profiling code, see \code{\LinkA {Rprof}{Rprof}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35059 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35061 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35062 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.35063 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.35063 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.35064 # # Example ~/.Renviron on Unix ! You can't use `macro parameter character #' in horizontal mode. l.35064 ## Example ~/.Renviron on Unix ! Missing $ inserted. $ l.35065 R_ LIBS=~/R/library ! Missing $ inserted. $ l.35067 ! You can't use `macro parameter character #' in vertical mode. l.35068 # # Example .Renviron on Windows ! You can't use `macro parameter character #' in vertical mode. l.35068 ## Example .Renviron on Windows ! Missing $ inserted. $ l.35069 R_ LIBS=C:/R/library ! Missing $ inserted. $ l.35071 ! You can't use `macro parameter character #' in vertical mode. l.35072 # # Example of setting R_DEFAULT_PACKAGES (from R CMD check) ! You can't use `macro parameter character #' in vertical mode. l.35072 ## Example of setting R_DEFAULT_PACKAGES (from R CMD check) ! Missing $ inserted. $ l.35072 ## Example of setting R_ DEFAULT_PACKAGES (from R CMD check) ! You can't use `macro parameter character #' in math mode. l.35074 # this loads the packages in the order given, so they appear on ! You can't use `macro parameter character #' in math mode. l.35075 # the search path in reverse order. ! Missing $ inserted. $ l.35076 Overfull \hbox (97.10692pt too wide) in paragraph at lines 35072--35076 []\OT1/cmr/m/n/10 Example of set-ting R$[]\OML/cmm/m/it/10 EFAULT[]ACKAGES\OT1/ cmr/m/n/10 (\OML/cmm/m/it/10 fromRCMDcheck\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 R[] EFAULT[]ACKAGES \OT1/cmr/m/n/10 =[] Overfull \hbox (171.2708pt too wide) in paragraph at lines 35072--35076 \OML/cmm/m/it/10 utils; grDevices; graphics; stats[]thisloadsthepackagesintheor dergiven; sotheyappearonthesearchpathinreverseorder:$ [340 [82] ! You can't use `macro parameter character #' in vertical mode. l.35077 # # Example of .Rprofile ! You can't use `macro parameter character #' in vertical mode. l.35077 ## Example of .Rprofile ! Undefined control sequence. l.35083 .First <- function() cat("\n Welcome to R!\n\n") ! Undefined control sequence. l.35083 ...<- function() cat("\n Welcome to R!\n \n") ! Undefined control sequence. l.35083 ... function() cat("\n Welcome to R!\n\n ") ! Undefined control sequence. l.35084 .Last <- function() cat("\n Goodbye!\n\n") ! Undefined control sequence. l.35084 .Last <- function() cat("\n Goodbye!\n \n") ! Undefined control sequence. l.35084 ...t <- function() cat("\n Goodbye!\n\n ") Underfull \hbox (badness 10000) in paragraph at lines 35077--35085 []\OT1/cmr/m/n/10 Example of .Rpro-file op-tions(width=65, dig-its=5) op- Underfull \hbox (badness 10000) in paragraph at lines 35077--35085 \OT1/cmr/m/n/10 tions(show.signif.stars=FALSE) setHook(packageEvent("grDevices" , "on- ! You can't use `macro parameter character #' in vertical mode. l.35086 # # Example of Rprofile.site ! You can't use `macro parameter character #' in vertical mode. l.35086 ## Example of Rprofile.site ! You can't use `macro parameter character #' in horizontal mode. l.35088 # add MASS to the default packages, set a CRAN mirror ! You can't use `macro parameter character #' in horizontal mode. l.35092 # # (for Unix terminal users) set the width from COLUMNS if set ! You can't use `macro parameter character #' in horizontal mode. l.35092 ## (for Unix terminal users) set the width from COLUMNS if set ! You can't use `macro parameter character #' in horizontal mode. l.35095 # interactive sessions get a fortune cookie (needs fortunes package) Underfull \hbox (badness 1028) in paragraph at lines 35086--35099 []\OT1/cmr/m/n/10 Example of Rpro-file.site lo-cal( add MASS to the de-fault p ack-ages, Underfull \hbox (badness 2653) in paragraph at lines 35086--35099 \OT1/cmr/m/n/10 set a CRAN mir-ror old <- getOp-tion("defaultPackages"); r <- g etOp- Underfull \hbox (badness 1137) in paragraph at lines 35086--35099 \OT1/cmr/m/n/10 c(old, "MASS"), re-pos = r) (for Unix ter-mi-nal users) set th e width ! You can't use `macro parameter character #' in vertical mode. l.35100 # # if .Renviron contains ! You can't use `macro parameter character #' in vertical mode. l.35100 ## if .Renviron contains ! Missing $ inserted. $ l.35101 FOOBAR="coo\bar "doh\ex"abc\"def'" ! Undefined control sequence. l.35101 FOOBAR="coo\bar"doh\ex "abc\"def'" LaTeX Warning: Command \" invalid in math mode on input line 35101. ! Please use \mathaccent for accents in math mode. \add@accent ...@spacefactor \spacefactor }\accent #1 #2\egroup \spacefactor ... l.35101 FOOBAR="coo\bar"doh\ex"abc\"d ef'" ! You can't use `\spacefactor' in math mode. \add@accent ...}\accent #1 #2\egroup \spacefactor \accent@spacefactor l.35101 FOOBAR="coo\bar"doh\ex"abc\"d ef'" ! Missing $ inserted. $ l.35102 ! You can't use `macro parameter character #' in vertical mode. l.35103 # # then we get ! You can't use `macro parameter character #' in vertical mode. l.35103 ## then we get ! You can't use `macro parameter character #' in horizontal mode. l.35104 # > cat(Sys.getenv("FOOBAR"), "\n") ! Undefined control sequence. l.35104 # > cat(Sys.getenv("FOOBAR"), "\n ] ") ! You can't use `macro parameter character #' in horizontal mode. l.35105 # coo\bardoh\exabc"def' ! Undefined control sequence. l.35105 # coo\bardoh \exabc"def' ! Undefined control sequence. l.35105 # coo\bardoh\exabc "def' ! You can't use `macro parameter character #' in vertical mode. l.35107 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.35107 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35108 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35109 \end{Examples} ! Undefined control sequence. l.35110 \HeaderA {stop}{Stop Function Execution}{stop} ! Undefined control sequence. l.35111 \aliasA {geterrmessage}{stop}{geterrmessage} ! Undefined control sequence. l.35112 \keyword {environment}{stop} ! Undefined control sequence. l.35113 \keyword {programming}{stop} ! Undefined control sequence. l.35114 \keyword {error}{stop} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35116 \begin{Description} \relax ! Undefined control sequence. l.35117 \code {stop} stops execution of the current expression and executes ! Undefined control sequence. l.35120 \code {geterrmessage} gives the last error message. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35121 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35123 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35128 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35130 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35131 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35132 \item[\code{...}] zero or more objects which can be coerced to chara... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35135 \item[\code{call.}] logical, indicating if the call should become pa... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35137 \item[\code{domain}] see \code{\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.35137 \item[\code{domain}] see \code {\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.35137 \item[\code{domain}] see \code{\LinkA {gettext}{gettext}}. If \code{... ! Undefined control sequence. l.35137 ...de{\LinkA{gettext}{gettext}}. If \code {NA}, messages will ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35139 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35140 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35142 \begin{Details} \relax ! Undefined control sequence. l.35145 \code {options(error=)}. The error is first signaled as if using ! Undefined control sequence. l.35146 \code {\LinkA{signalCondition}{signalCondition}()}. If there are no ... ! Undefined control sequence. l.35146 \code{\LinkA {signalCondition}{signalCondition}()}. If there are no ... ! Undefined control sequence. l.35148 \code {options("show.error.messages")} is true) and the default error ! Undefined control sequence. l.35149 ...used. The default behaviour (the \code {NULL} ! Undefined control sequence. l.35152 (effectively) call \code {\LinkA{q}{q}("no", status = 1, runLast = FA... ! Undefined control sequence. l.35152 (effectively) call \code{\LinkA {q}{q}("no", status = 1, runLast = FA... ! Undefined control sequence. l.35154 retrieved by \code {geterrmessage()}. It also stores a trace of ! Undefined control sequence. l.35155 ...ll stack that can be retrieved by \code {\LinkA{traceback}{traceba... ! Undefined control sequence. l.35155 ...k that can be retrieved by \code{\LinkA {traceback}{traceback}()}. ! Undefined control sequence. l.35157 Errors will be truncated to \code {getOption("warning.length")} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35162 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35164 \begin{Value} ! Undefined con [83trol sequence. l.35165 \code {geterrmessage} gives the last error message, as a character st... ! Undefined control sequence. l.35166 ending in \code {"\bsl{}n"}. ! Undefined control sequence. l.35166 ending in \code{"\bsl {}n"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35167 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35169 \begin{Note} \relax ! Undefined control sequence. l.35170 Use \code {domain = NA} whenever \code{...} contain a ! Undefined control sequence. l.35170 Use \code{domain = NA} whenever \code {...} contain a ! Undefined control sequence. l.35171 result from \code {\LinkA{gettextf}{gettextf}()} as that is translate... ! Undefined control sequence. l.35171 result from \code{\LinkA {gettextf}{gettextf}()} as that is translate... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35172 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35174 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35178 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35180 \begin{SeeAlso} \relax ! Undefined control sequence. l.35181 \code {\LinkA{warning}{warning}}, \code{\LinkA{try}{try}} to catch er... ! Undefined control sequence. l.35181 \code{\LinkA {warning}{warning}}, \code{\LinkA{try}{try}} to catch er... ! Undefined control sequence. l.35181 \code{\LinkA{warning}{warning}}, \code {\LinkA{try}{try}} to catch er... ! Undefined control sequence. l.35181 ...\LinkA{warning}{warning}}, \code{\LinkA {try}{try}} to catch error... ! Undefined control sequence. l.35182 and \code {\LinkA{options}{options}} for setting error handlers. ! Undefined control sequence. l.35182 and \code{\LinkA {options}{options}} for setting error handlers. ! Undefined control sequence. l.35183 \code {\LinkA{stopifnot}{stopifnot}} for validity testing. \code{try... ! Undefined control sequence. l.35183 \code{\LinkA {stopifnot}{stopifnot}} for validity testing. \code{try... ! Undefined control sequence. l.35183 ...topifnot}} for validity testing. \code {tryCatch} ! Undefined control sequence. l.35184 and \code {withCallingHandlers} can be used to establish custom handlers ! Undefined control sequence. l.35187 \code {\LinkA{gettext}{gettext}} for the mechanisms for the automated... ! Undefi]ned control sequence. l.35187 \code{\LinkA {gettext}{gettext}} for the mechanisms for the automated... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35189 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35191 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35192 \begin{ExampleCode} [341] ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35201 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35202 \end{Examples} ! Undefined control sequence. l.35203 \HeaderA {stopifnot}{Ensure the Truth of R Expressions}{stopifnot} ! Undefined control sequence. l.35204 \keyword {environment}{stopifnot} ! Undefined control sequence. l.35205 \keyword {programming}{stopifnot} ! Undefined control sequence. l.35206 \keyword {error}{stopifnot} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35208 \begin{Description} \relax ! Undefined control sequence. l.35209 If any of the expressions in \code {...} are not \code{\LinkA{all}{all}} ! Undefined control sequence. l.35209 ...expressions in \code{...} are not \code {\LinkA{all}{all}} ! Undefined control sequence. l.35209 ...ions in \code{...} are not \code{\LinkA {all}{all}} ! Undefined control sequence. l.35210 \code {TRUE}, \code{\LinkA{stop}{stop}} is called, producing an error... ! Undefined control sequence. l.35210 \code{TRUE}, \code {\LinkA{stop}{stop}} is called, producing an error... ! Undefined control sequence. l.35210 \code{TRUE}, \code{\LinkA {stop}{stop}} is called, producing an error... ! Undefined control sequence. l.35211 ...e \emph{first} of the elements of \code {...} which were ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35213 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35215 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35219 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35221 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35222 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35223 \item[\code{...}] any number of (\code{\LinkA{logical}{logical}}) \R... ! Undefined control sequence. l.35223 \item[\code{...}] any number of (\code {\LinkA{logical}{logical}}) \R... ! Undefined control sequence. l.35223 ...\code{...}] any number of (\code{\LinkA {logical}{logical}}) \R{} ... ! Undefined control sequence. l.35223 ...of (\code{\LinkA{logical}{logical}}) \R {} expressions, ! Undefined control sequence. l.35224 which should evaluate to \code {\LinkA{TRUE}{TRUE}}. ! Undefined control sequence. l.35224 which should evaluate to \code{\LinkA {TRUE}{TRUE}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35225 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35226 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35228 \begin{Details} \relax Underfull \hbox (badness 2478) in paragraph at lines 35223--35231 []\OT1/cmr/m/n/10 any num-ber of (log-i-cal-log-i-cal) ex-pres-sions, which sh ould eval-u-ate to ! Undefined control sequence. l.35232 \code {stopifnot(A, B)} is conceptually equivalent to ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35233 \begin{alltt} \{ if(any(is.na(A)) || !all(A)) stop(...); ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35234 ...B)) || !all(B)) stop(...) \}\end{alltt} ! Undefined control sequence. l.35237 Since \R {} version 3.4.0, when an expression (from \code{...}) is not ! Undefined control sequence. l.35237 ...n 3.4.0, when an expression (from \code {...}) is not ! Undefined control sequence. l.35238 true \emph{and} is a call to \code {\LinkA{all.equal}{all.equal}}, th... ! Undefined control sequence. l.35238 true \emph{and} is a call to \code{\LinkA {all.equal}{all.equal}}, th... ! Undefined control sequence. l.35240 \code {\LinkA{all.equal}{all.equal}(*)}. ! Undefined control sequence. l.35240 \code{\LinkA {all.equal}{all.equal}(*)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35241 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35243 \begin{Value} ! Undefined control sequence. l.35244 (\code [84 {\LinkA{NULL}{NULL}} if all statements in \code{...} are \code... ! Undefined control sequence. l.35244 (\code{\LinkA {NULL}{NULL}} if all statements in \code{...} are \code... ! Undefined control sequence. l.35244 ...NULL}{NULL}} if all statements in \code {...} are \code{TRUE}.) ! Undefined control sequence. l.35244 ... all statements in \code{...} are \code {TRUE}.) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35245 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35247 \begin{SeeAlso} \relax ! Undefined control sequence. l.35248 \code {\LinkA{stop}{stop}}, \code{\LinkA{warning}{warning}}; ! Undefined control sequence. l.35248 \code{\LinkA {stop}{stop}}, \code{\LinkA{warning}{warning}}; ! Undefined control sequence. l.35248 \code{\LinkA{stop}{stop}}, \code {\LinkA{warning}{warning}}; ! Undefined control sequence. l.35248 \code{\LinkA{stop}{stop}}, \code{\LinkA {warning}{warning}}; ! Undefined control sequence. l.35249 \code {\LinkA{assertCondition}{assertCondition}} in package \pkg{tool... ! Undefined control sequence. l.35249 \code{\LinkA {assertCondition}{assertCondition}} in package \pkg{tool... ! Undefined control sequence. l.35249 ...tion}{assertCondition}} in package \pkg {tools} complements ! Undefined control sequence. l.35250 \code {stopifnot()} for testing warnings and errors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35251 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35253 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35254 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.35255 ... 1, all.equal(pi, 3.14159265), 1 < 2) # all TRUE ! You can't use `macro parameter character #' in horizontal mode. l.35258 ...fnot(m == t(m), diag(m) == rep(1, 2)) # all(.) |=> TRUE ! You can't use `macro parameter character #' in horizontal mode. l.35261 # "disabling stop(.)" << Use with CARE! >> Underfull \hbox (badness 2529) in paragraph at lines 35263--35265 []\OT1/cmr/m/n/10 stopifnot(all.equal(pi, 3.141593), 2 < 2, all(1:10 < 12), "a" < "b") ! You can't use `macro parameter character #' in vertical mode. l.35266 # long all.equal() error messages are abbreviated: Underfull \hbox (badness 10000) in paragraph at lines 35266--35268 []\OT1/cmr/m/n/10 long all.equal() er-ror mes-sages are ab-bre-vi-ated: ! You can't use `macro parameter character #' in horizontal mode. l.35269 options(op) # revert to previous error handler ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35270 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35271 \end{Examples} ! Undefined control sequence. l.35272 \HeaderA {strptime}{Date-time Conversion Functions to and from Charac... ! Undefined control sequence. l.35273 \aliasA {as.character.POSIXt}{strptime}{as.character.POSIXt} ! Undefined control sequence. l.35274 \aliasA {format.POSIXct}{strptime}{format.POSIXct} ! Undefined control sequence. l.35275 \aliasA {format.POSIXlt}{strptime}{format.POSIXlt} ! Undefined control sequence. l.35276 \aliasA {strftime}{strptime}{strftime} ! Undefined control sequence. l.35277 \keyword {utilities}{strptime} ! Undefined control sequence. l.35278 \keyword {chron}{strptime} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35280 \begin{Description} \relax ! Undefined control sequence. l.35282 classes \code {"POSIXlt"} and \code{"POSIXct"} representing calendar ! Undefined control sequence. l.35282 classes \code{"POSIXlt"} and \code {"POSIXct"} representing calendar ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35284 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35286 \begin{Usage} Underfull \hbox (badness 7722) in paragraph at lines 35269--35287 []\OT1/cmr/m/n/10 options(op) re-vert to pre-vi-ous er-ror han-dler strptime Date- Underfull \hbox (badness 10000) in paragraph at lines 35269--35287 \OT1/cmr/m/n/10 time Con-ver-sion Func-tions to and from Char-ac-ter-strp- Underfull \hbox (badness 10000) in paragraph at lines 35269--35287 \OT1/cmr/m/n/10 time as.character.POSIXtstrptimeas.character.POSIXt for- Overfull \hbox (1.63976pt too wide) in paragraph at lines 35269--35287 \OT1/cmr/m/n/10 mat.POSIXctstrptimeformat.POSIXct for-mat.POSIXltstrptimeformat .POSIXlt Underfull \hbox (badness 1043) in paragraph at lines 35269--35287 \OT1/cmr/m/n/10 be-tween char-ac-ter rep-re-sen-ta-tions and ob-jects of classe s "POSIXlt" and ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35299 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35301 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.35302 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35303 \item[\code{x}] An object to be converted: a character vector for ! Undefined control sequence. l.35304 \code {strptime}, an object which can be converted to ! Undefined control sequence. l.35305 \code {"\LinkA{POSIXlt}{POSIXlt}"} for \code{strftime}. ! Undefined control sequence. l.35305 \code{"\LinkA {POSIXlt}{POSIXlt}"} for \code{strftime}. ! Undefined control sequence. l.35305 ...e{"\LinkA{POSIXlt}{POSIXlt}"} for \code {strftime}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35306 \item[\code{tz}] A character string specifying the time zone to be u... ! Undefined control sequence. l.35307 ...conversion. System-specific (see \code {\LinkA{as.POSIXlt}{as.POS... ! Undefined control sequence. l.35307 ...ion. System-specific (see \code{\LinkA {as.POSIXlt}{as.POSIXlt}})... ! Undefined control sequence. l.35308 \code {""} is the current time zone, and \code{"GMT"} is UTC. ! Undefined control sequence. l.35308 ...""} is the current time zone, and \code {"GMT"} is UTC. [342] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35311 \item[\code{format}] A character string. The default for the \code{... ! Undefined control sequence. l.35311 ...cter string. The default for the \code {format} ! Undefined control sequence. l.35313 \code {"\%Y-\%m-\%d \%H:\%M:\%S"} if any element has a time ! Undefined control sequence. l.35314 component which is not midnight, and \code {"\%Y-\%m-\%d"} ! Undefined control sequence. l.35315 otherwise. If \code {\LinkA{options}{options}("digits.secs")} is set... ! Undefined control sequence. l.35315 otherwise. If \code{\LinkA {options}{options}("digits.secs")} is set... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35317 \item[\code{...}] Further arguments to be passed from or to other me... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35318 \item[\code{usetz}] logical. Should the time zone abbreviation be a... ! Undefined control sequence. l.35320 than using \code {"\%Z"}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35321 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35322 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35324 \begin{Details} \relax ! Undefined control sequence. l.35325 The \code {format} and \code{as.character} methods and \code{strftime} ! Undefined control sequence. l.35325 The \code{format} and \code {as.character} methods and \code{strftime} ! Undefined control sequence. l.35325 ...d \code{as.character} methods and \code {strftime} ! Undefined control sequence. l.35326 convert objects from the classes \code {"\LinkA{POSIXlt}{POSIXlt}"} and ! Undefined control sequence. l.35326 ... objects from the classes \code{"\LinkA {POSIXlt}{POSIXlt}"} and ! Undefined control sequence. l.35327 \code {"\LinkA{POSIXct}{POSIXct}"} to character vectors. ! Undefined control sequence. l.35327 \code{"\LinkA {POSIXct}{POSIXct}"} to character vectors. ! Undefined control sequence. l.35329 \code {strptime} converts character vectors to class \code{"POSIXlt"}: ! Undefined control sequence. l.35329 ...nverts character vectors to class \code {"POSIXlt"}: ! Undefined control sequence. l.35330 its input \code Underfull \hbox (badness 2443) in paragraph at lines 7432--7435 []@textrm Data frames are slower than ma-tri-ces and this is an ex-am-ple of wh y. Us-ing Underfull \hbox (badness 10000) in paragraph at lines 7455--7460 []@textrm Options in-clude us-ing @texttt sprof[] @textrm for a shared ob-ject, and @texttt oprofile[] @textrm (see Underfull \hbox (badness 4927) in paragraph at lines 7455--7460 [][]@texttt http://oprofile.sourceforge.net/[][][]@textrm ) and @texttt perf[] @textrm (see [][]@texttt https://perf.wiki.kernel.org/ [85 {x} is first converted by \code{\LinkA{as.character}{... ! Undefined control sequence. l.35330 ...ut \code{x} is first converted by \code {\LinkA{as.character}{as.c... ! Undefined control sequence. l.35330 ...e{x} is first converted by \code{\LinkA {as.character}{as.characte... ! Undefined control sequence. l.35334 \code {strftime} is a wrapper for \code{format.POSIXlt}, and it and ! Undefined control sequence. l.35334 \code{strftime} is a wrapper for \code {format.POSIXlt}, and it and ! Undefined control sequence. l.35335 \code {format.POSIXct} first convert to class \code{"POSIXlt"} by ! Undefined control sequence. l.35335 ...t.POSIXct} first convert to class \code {"POSIXlt"} by ! Undefined control sequence. l.35336 calling \code {\LinkA{as.POSIXlt}{as.POSIXlt}} (so they also work for... ! Undefined control sequence. l.35336 calling \code{\LinkA {as.POSIXlt}{as.POSIXlt}} (so they also work for... ! Undefined control sequence. l.35337 \code {"\LinkA{Date}{Date}"}). Note that only that conversion depend... ! Undefined control sequence. l.35337 \code{"\LinkA {Date}{Date}"}). Note that only that conversion depend... ! Undefined control sequence. l.35340 ...r re-cycling rules are applied to \code {x} and ! Undefined control sequence. l.35341 \code {format} so the answer will be of length of the longer of these ! Undefined control sequence. l.35347 formats such as \code {\%x} and \code{\%X}, \emph{via} the setting of ! Undefined control sequence. l.35347 formats such as \code{\%x} and \code {\%X}, \emph{via} the setting of ! Undefined control sequence. l.35348 the \code {\LinkA{LC\_TIME}{LC.Rul.TIME}} locale category. The `current ! Undefined control sequence. l.35348 the \code{\LinkA {LC\_TIME}{LC.Rul.TIME}} locale category. The `current ! Undefined control sequence. l.35350 of the \R {} session or when these functions are first used. (For in... ! Undefined control sequence. l.35352 \code {\LinkA{Sys.setlocale}{Sys.setlocale}} with category \code{LC\_... ! Undefined control sequence. l.35352 \code{\LinkA {Sys.setlocale}{Sys.setlocale}} with category \code{LC\_... ! Undefined control sequence. l.35352 ...le}{Sys.setlocale}} with category \code {LC\_TIME} since \R{} ! Undefined control sequence. l.35352 ... with category \code{LC\_TIME} since \R {} ! Undefined control sequence. l.35353 3.1.0 or \code {LC\_ALL} since \R{} 3.4.1. For output, what happens ! Undefined control sequence. l.35353 3.1.0 or \code{LC\_ALL} since \R {} 3.4.1. For output, what happens ! Undefined control sequence. l.35359 ...n specification} is introduced by \code {\%}, usually ! Undefined control sequence. l.35360 followed by a single letter or \code {O} or \code{E} and then a single ! Undefined control sequence. l.35360 ...by a single letter or \code{O} or \code {E} and then a single ! Undefined control sequence. l.35362 ...ion is interpreted literally (and \code {\%\%} gives ! Undefined control sequence. l.35363 \code {\%}). Widely implemented conversion specifications include ! Undefined control sequence. \code {\%a} l.35366 \item[\code{\%a}] Abbreviated weekday name in the current ! Undefined control sequence. \code {\%A} l.35369 \item[\code{\%A}] Full weekday name in the current locale. (Also ! Undefined control sequence. \code {\%b} l.35371 \item[\code{\%b}] Abbreviated month name in the current locale on ! Undefined control sequence. \code {\%B} l.35374 \item[\code{\%B}] Full month name in the current locale. (Also ! Undefined control sequence. \code {\%c} l.35376 \item[\code{\%c}] Date and time. Locale-specific on output, ! Undefined control sequence. l.35377 \code {"\%a \%b \%e \%H:\%M:\%S \%Y"} on input. [343]]> [86 [71 ! Undefined control sequence. \code {\%C} l.35378 \item[\code{\%C}] Century (00--99): the integer part of the year ! Undefined control sequence. \code {\%d} l.35380 \item[\code{\%d}] Day of the month as decimal number (01--31). ! Undefined control sequence. \code {\%D} l.35381 \item[\code{\%D}] Date format such as \code{\%m/\%d/\%y}: the C99 ! Undefined control sequence. l.35381 ...m[\code{\%D}] Date format such as \code {\%m/\%d/\%y}: the C99 ! Undefined control sequence. \code {\%e} l.35384 \item[\code{\%e}] Day of the month as decimal number (1--31), with ! Undefined control sequence. \code {\%F} l.35386 \item[\code{\%F}] Equivalent to \%Y-\%m-\%d (the ISO 8601 date ! Undefined control sequence. \code {\%g} l.35388 \item[\code{\%g}] The last two digits of the week-based year ! Undefined control sequence. l.35389 (see \code {\%V}). (Accepted but ignored on input.) ! Undefined control sequence. \code {\%G} l.35390 \item[\code{\%G}] The week-based year (see \code{\%V}) as a decimal ! Undefined control sequence. l.35390 ...de{\%G}] The week-based year (see \code {\%V}) as a decimal ! Undefined control sequence. \code {\%h} l.35392 \item[\code{\%h}] Equivalent to \code{\%b}. ! Undefined control sequence. l.35392 \item[\code{\%h}] Equivalent to \code {\%b}. ! Undefined control sequence. \code {\%H} l.35393 \item[\code{\%H}] Hours as decimal number (00--23). As a special ! Undefined control sequence. l.35394 exception strings such as \samp {24:00:00} are accepted for input, ! Undefined control sequence. \code {\%I} l.35396 \item[\code{\%I}] Hours as decimal number (01--12). ! Undefined control sequence. \code {\%j} l.35397 \item[\code{\%j}] Day of year as decimal number (001--366). ! Undefined control sequence. \code {\%m} l.35398 \item[\code{\%m}] Month as decimal number (01--12). ! Undefined control sequence. \code {\%M} l.35399 \item[\code{\%M}] Minute as decimal number (00--59). ! Undefined control sequence. \code {\%n} l.35400 \item[\code{\%n}] Newline on output, arbitrary whitespace on input. ! Undefined control sequence. \code {\%p} l.35401 \item[\code{\%p}] AM/PM indicator in the locale. Used in ! Undefined control sequence. l.35402 conjunction with \code {\%I} and \bold{not} with \code{\%H}. An ! Undefined control sequence. l.35402 conjunction with \code{\%I} and \bold {not} with \code{\%H}. An ! Undefined control sequence. l.35402 ...th \code{\%I} and \bold{not} with \code {\%H}. An ! Undefined control sequence. l.35407 Some platforms accept \code {\%P} for output, which uses a lower-case ! Undefined control sequence. l.35408 version (\code {\%p} may also use lower case): others will output ! Undefined control sequence. l.35409 \code {P}. ! Undefined control sequence. \code {\%r} l.35410 \item[\code{\%r}] For output, the 12-hour clock time (using the ! Undefined control sequence. l.35413 For input, equivalent to \code {\%I:\%M:\%S \%p}. ! Undefined control sequence. \code {\%R} l.35414 \item[\code{\%R}] Equivalent to \code{\%H:\%M}. ! Undefined control sequence. l.35414 \item[\code{\%R}] Equivalent to \code {\%H:\%M}. ! Undefined control sequence. \code {\%S} l.35415 \item[\code{\%S}] Second as integer (00--61), allowing for ! Undefined control sequence. \code {\%t} l.35418 \item[\code{\%t}] Tab on output, arbitrary whitespace on input. ! Undefined control sequence. \code {\%T} l.35419 \item[\code{\%T}] Equivalent to \code{\%H:\%M:\%S}. ! Undefined control sequence. l.35419 \item[\code{\%T}] Equivalent to \code {\%H:\%M:\%S}. ! Undefined control sequence. \code {\%u} l.35420 \item[\code{\%u}] Weekday as a decimal number (1--7, Monday is 1). ! Undefined control sequence. \code {\%U} l.35422 \item[\code{\%U}] Week of the year as decimal number (00--53) using [344]]] \code {\%V} l.35425 \item[\code{\%V}] Week of the year as decimal number (01--53) as ! Undefined control sequence. \code {\%w} l.35431 \item[\code{\%w}] Weekday as decimal number (0--6, Sunday is 0). ! Undefined control sequence. \code {\%W} l.35432 \item[\code{\%W}] Week of the year as decimal number (00--53) using ! Undefined control sequence. \code {\%x} l.35435 \item[\code{\%x}] Date. Locale-specific on output, ! Undefined control sequence. l.35436 \code {"\%y/\%m/\%d"} on input. ! Undefined control sequence. \code {\%X} l.35437 \item[\code{\%X}] Time. Locale-specific on output, ! Undefined control sequence. l.35438 \code {"\%H:\%M:\%S"} on input. ! Undefined control sequence. \code {\%y} l.35439 \item[\code{\%y}] Year without century (00--99). On input, values ! Undefined control sequence. \code {\%Y} l.35444 \item[\code{\%Y}] Year with century. Note that whereas there was no ! Undefined control sequence. l.35447 \url {https://en.wikipedia.org/wiki/0_(year)}. Note that the standards ! Missing $ inserted. $ l.35447 \url{https://en.wikipedia.org/wiki/0_ (year)}. Note that the standards ! Extra }, or forgotten $. l.35447 ...https://en.wikipedia.org/wiki/0_(year)} . Note that the standards ! Missing $ inserted. $ l.35450 ! Missing } inserted. } l.35450 Underfull \hbox (badness 10000) in paragraph at lines 35444--35450 []\OT1/cmr/m/n/10 Year with cen-tury. Note that whereas there was no Underfull \hbox (badness 10000) in paragraph at lines 35444--35450 \OT1/cmr/m/n/10 zero in the orig-i-nal Gre-go-rian cal-en-dar, ISO 8601:2004 Underfull \hbox (badness 10000) in paragraph at lines 35444--35450 \OT1/cmr/m/n/10 de-fines it to be valid (in-ter-preted as 1BC): see Overfull \hbox (377.04672pt too wide) in paragraph at lines 35444--35450 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/0$[]\OML/cmm/m/it/10 year\OT1/cmr /m/n/10 )\OML/cmm/m/it/10 :Notethatthestandardsalsosaythatyearsbefore\OT1/cmr/m /n/10 1582\OML/cmm/m/it/10 initscalendarshouldonlybeusedwithagreementoftheparti esinvolved:[]$ ! Undefined control sequence. l.35451 For input, only years \code {0:9999} are accepted. ! Undefined control sequence. \code {\%z} l.35452 \item[\code{\%z}] Signed offset in hours and minutes ! Undefined control sequence. l.35453 from UTC, so \code {-0800} is 8 hours behind UTC. Values up to ! Undefined control sequence. l.35454 \code {+1400} are accepted. (Standard only for output.) ! Undefined control sequence. \code {\%Z} l.35455 \item[\code{\%Z}] (Output only.) Time zone abbreviation as a ! Undefined control sequence. l.35465 the standards specify that in the \samp {C} locale they must be the ! Undefined control sequence. l.35470 if you wish to use \code {\%a}, \code{\%b} or \code{\%h} as part of an ! Undefined control sequence. l.35470 if you wish to use \code{\%a}, \code {\%b} or \code{\%h} as part of an ! Undefined control sequence. l.35470 ... to use \code{\%a}, \code{\%b} or \code {\%h} as part of an ! Undefined control sequence. l.35474 When \code {\%z} or \code{\%Z} is used for output with an ! Undefined control sequence. l.35474 When \code{\%z} or \code {\%Z} is used for output with an ! Undefined control sequence. \code {\%k} l.35481 \item[\code{\%k}] The 24-hour clock time with single digits preceded ! Undefined control sequence. \code {\%l} l.35483 \item[\code{\%l}] The 12-hour clock time with single digits preceded ! Undefined control sequence. \code {\%s} l.35485 \item[\code{\%s}] (Output only.) The number of seconds since the [345 [88]] Overfull \hbox (310.88272pt too wide) in paragraph at lines 7675--7680 [][]@texttt https://developer.apple.com/library/mac/#documentation/DeveloperToo ls/Conceptual/InstrumentsUserGuide/Introduction/Introduction.html[][][]@textrm ). Chapter 4 [89] ! Undefined control sequence. \code {\%+} l.35487 \item[\code{\%+}] (Output only.) Similar to \code{\%c}, often ! Undefined control sequence. l.35487 ...e{\%+}] (Output only.) Similar to \code {\%c}, often ! Undefined control sequence. l.35488 \code {"\%a \%b \%e \%H:\%M:\%S \%Z \%Y"}. May depend on the locale. ! Undefined control sequence. l.35492 For output there are also \code {\%O[dHImMUVwWy]} which may emit ! Undefined control sequence. l.35494 numerals), and \code {\%E[cCyYxX]} which can use an alternative ! Undefined control sequence. l.35499 Specific to \R {} is \code{\%OSn}, which for output gives the seconds ! Undefined control sequence. l.35499 Specific to \R{} is \code {\%OSn}, which for output gives the seconds ! Undefined control sequence. l.35500 truncated to \code {0 <= n <= 6} decimal places (and if \code{\%OS} is ! Undefined control sequence. l.35500 ...<= n <= 6} decimal places (and if \code {\%OS} is ! Undefined control sequence. l.35502 \code {\LinkA{getOption}{getOption}("digits.secs")}, or if that is un... ! Undefined control sequence. l.35502 \code{\LinkA {getOption}{getOption}("digits.secs")}, or if that is un... ! Undefined control sequence. l.35502 ...its.secs")}, or if that is unset, \code {n = ! Undefined control sequence. l.35503 0}). Further, for \code {strptime} \code{\%OS} will input seconds ! Undefined control sequence. l.35503 0}). Further, for \code{strptime} \code {\%OS} will input seconds ! Undefined control sequence. l.35504 ...ng fractional seconds. Note that \code {\%S} does not read ! Undefined control sequence. l.35508 character sequences commencing with \code {\%} \emph{are} conversion ! Undefined control sequence. l.35510 use of multi-byte characters in \code {format} is unsupported: UTF-8 ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35512 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35514 \begin{Value} ! Undefined control sequence. l.35515 The \code {format} methods and \code{strftime} return character vectors ! Undefined control sequence. l.35515 The \code{format} methods and \code {strftime} return character vectors ! Undefined control sequence. l.35516 representing the time. \code {NA} times are returned as ! Undefined control sequence. l.35517 \code {NA\_character\_}. The elements are restricted to 256 bytes, plus ! Undefined control sequence. l.35518 a time zone abbreviation if \code {usetz} is true. (On known platforms ! Undefined control sequence. l.35522 \code {strptime} turns character representations into an object of ! Undefined control sequence. l.35523 class \code {"\LinkA{POSIXlt}{POSIXlt}"}. The time zone is used to s... ! Undefined control sequence. l.35523 class \code{"\LinkA {POSIXlt}{POSIXlt}"}. The time zone is used to s... ! Undefined control sequence. l.35524 \code {isdst} component and to set the \code{"tzone"} attribute if ! Undefined control sequence. l.35524 ...e{isdst} component and to set the \code {"tzone"} attribute if ! Undefined control sequence. l.35525 \code {tz != ""}. If the specified time is invalid (for example ! Undefined control sequence. l.35526 \samp {"2010-02-30 08:00"}) all the components of the result are ! Undefined control sequence. l.35527 \code {NA}. (NB: this does means exactly what it says -- if it is an ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35530 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35532 \begin{Section} {Printing years} ! Undefined control sequence. l.35540 \url {https://en.wikipedia.org/wiki/0_(year)}, and some OSes get them ! Missing $ inserted. $ l.35540 \url{https://en.wikipedia.org/wiki/0_ (year)}, and some OSes get them ! Extra }, or forgotten $. l.35540 ...https://en.wikipedia.org/wiki/0_(year)} , and some OSes get them ! Undefined control sequence. l.35541 ...etely wrong). Common formats are \code {-45} and \code{-045}. ! Undefined control sequence. l.35541 ...Common formats are \code{-45} and \code {-045}. ! Missing $ inserted. $ l.35542 Underfull \hbox (badness 3942) in paragraph at lines 35538--35542 []\OT1/cmr/m/n/10 OS fa-cil-i-ties will prob-a-bly not print years be-fore 1 CE (aka 1 Underfull \hbox (badness 1496) in paragraph at lines 35538--35542 \OT1/cmr/m/n/10 AD) `cor-rectly' (they tend to as-sume the ex-is-tence of a yea r 0: see Overfull \hbox (162.15245pt too wide) in paragraph at lines 35538--35542 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/0$[]\OML/cmm/m/it/10 year\OT1/cmr /m/n/10 )\OML/cmm/m/it/10 ; andsomeOSesgetthemcompletelywrong\OT1/cmr/m/n/10 )\ OML/cmm/m/it/10 :Commonformatsare[]and[]:$ ! Undefined control sequence. l.35547 Linux the format \code {"\%04Y"} assures a minimum of four characters ! Undefined control sequence. l.35550 \code {\%\_4Y} and \code{\%\_Y} can be used for space padding and no ! Undefined control sequence. l.35550 \code{\%\_4Y} and \code {\%\_Y} can be used for space padding and no ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35552 \end{Section} ! Missing } inserted. } l.35552 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35554 \begin{Section} {Time zone offsets} ! Undefined control sequence. l.35556 between timezones and to/from class \code {"POSIXct"}, but cause ! Undefined control sequence. l.35560 specifications (see \code {\LinkA{Sys.timezone}{Sys.timezone}}): posi... ! Undefined control sequence. l.35560 specifications (see \code{\LinkA {Sys.timezone}{Sys.timezone}}): posi... ! Undefined control sequence. l.35565 \code {-0800} (e.g., used on the Pacific coast of the US in winter). [346 [90]] ! Undefined control sequence. l.35567 Format \code {\%z} can be used for input or output: it is a character ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35572 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35574 \begin{Note} \relax ! Undefined control sequence. l.35576 standard which expresses a day as \code {"2001-02-28"} and a time as ! Undefined control sequence. l.35577 \code {"14:01:02"} using leading zeroes as here. (The ISO form uses no ! Undefined control sequence. l.35578 space to separate dates and times: \R {} does by default.) ! Undefined control sequence. l.35580 For \code {strptime} the input string need not specify the date ! Undefined control sequence. l.35584 specified by \code {\%d} or \code{\%e} since the current day of the ! Undefined control sequence. l.35584 specified by \code{\%d} or \code {\%e} since the current day of the ! Undefined control sequence. l.35586 be returned as \code {NA} (but an unknown \code{tzone} component is ! Undefined control sequence. l.35586 ...rned as \code{NA} (but an unknown \code {tzone} component is ! Undefined control sequence. l.35594 (also known as `summer') time. \code {strptime} does not ! Undefined control sequence. l.35596 conversion by \code {\LinkA{as.POSIXct}{as.POSIXct}} will do so. Con... ! Undefined control sequence. l.35596 conversion by \code{\LinkA {as.POSIXct}{as.POSIXct}} will do so. Con... ! Undefined control sequence. l.35597 \code {strftime} and formatting/printing uses OS facilities and may ! Undefined control sequence. l.35600 In a C locale \code {\%c} is required to be ! Undefined control sequence. l.35601 \code {"\%a \%b \%e \%H:\%M:\%S \%Y"}. As Windows does not comply (and ! Undefined control sequence. l.35603 used by \R {} on Windows in all locales. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35604 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35606 \begin{References} \relax ! Undefined control sequence. l.35611 \url {https://dotat.at/tmp/ISO_8601-2004_E.pdf} and ! Missing $ inserted. $ l.35611 \url{https://dotat.at/tmp/ISO_ 8601-2004_E.pdf} and ! Extra }, or forgotten $. l.35611 ...tps://dotat.at/tmp/ISO_8601-2004_E.pdf} and ! Undefined control sequence. l.35612 \url {http://www.qsl.net/g1smd/isopdf.htm}; for information on the ! Undefined control sequence. l.35613 current official version, see \url {https://www.iso.org/iso/iso8601}. ! Missing $ inserted. $ l.35614 Underfull \hbox (badness 1320) in paragraph at lines 35600--35614 \OT1/ [91cmr/m/n/10 out-side N. Amer-ica), that for-mat is used by on Win-dows in all lo- Underfull \hbox (badness 1762) in paragraph at lines 35600--35614 \OT1/cmr/m/it/10 ISO 8601. Data el-e-ments and in-ter-change for-mats -- In-for -ma-tion in- Underfull \hbox (badness 1466) in paragraph at lines 35600--35614 \OT1/cmr/m/it/10 ter-change -- Rep-re-sen-ta-tion of dates and times. \OT1/cmr/ m/n/10 For links to ver-sions Overfull \hbox (273.18875pt too wide) in paragraph at lines 35600--35614 \OT1/cmr/m/n/10 2004[]\OML/cmm/m/it/10 :pdfand[]\OT1/cmr/m/n/10 ; \OML/cmm/m/it /10 forinformationonthecurrentofficialversion; see[]:$ ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35616 \end{References} ! Missing } inserted. } l.35616 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35618 \begin{SeeAlso} \relax ! Undefined control sequence. l.35619 \LinkA {DateTimeClasses}{DateTimeClasses} for details of the date-tim... ! Undefined control sequence. l.35620 \LinkA {locales}{locales} to query or set a locale. ! Undefined control sequence. l.35622 Your system's help page on \code {strftime} to see how to specify their ! Undefined control sequence. l.35623 ... some systems, including Windows, \code {strftime} is ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35625 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35627 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35628 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.35630 # # locale-specific version of date() ! You can't use `macro parameter character #' in vertical mode. l.35630 ## locale-specific version of date() ! You can't use `macro parameter character #' in vertical mode. l.35633 # # time to sub-second accuracy (if supported by the OS) ! You can't use `macro parameter character #' in vertical mode. l.35633 ## time to sub-second accuracy (if supported by the OS) ! You can't use `macro parameter character #' in vertical mode. l.35636 # # read in date info in format 'ddmmmyyyy' ! You can't use `macro parameter character #' in vertical mode. l.35636 ## read in date info in format 'ddmmmyyyy' ! You can't use `macro parameter character #' in horizontal mode. l.35637 # # This will give NA(s) in some locales; setting the C locale ! You can't use `macro parameter character #' in horizontal mode. l.35637 ## This will give NA(s) in some locales; setting the C locale ! You can't use `macro parameter character #' in horizontal mode. l.35638 # # as in the commented lines will overcome this on most systems. ! You can't use `macro parameter character #' in horizontal mode. l.35638 ## as in the commented lines will overcome this on most systems. ! You can't use `macro parameter character #' in horizontal mode. l.35639 # # lct <- Sys.getlocale("LC_TIME"); Sys.setlocale("LC_TIME", "C") ! You can't use `macro parameter character #' in horizontal mode. l.35639 ## lct <- Sys.getlocale("LC_TIME"); Sys.setlocale("LC_TIME", "C") ! Missing $ inserted. $ l.35639 ## lct <- Sys.getlocale("LC_ TIME"); Sys.setlocale("LC_TIME", "C") ! You can't use `macro parameter character #' in math mode. l.35642 # # Sys.setlocale("LC_TIME", lct) ! You can't use `macro parameter character #' in math mode. l.35642 ## Sys.setlocale("LC_TIME", lct) ! Missing $ inserted. $ l.35644 Underfull \hbox (badness 10000) in paragraph at lines 35636--35644 []\OT1/cmr/m/n/10 read in date info in for-mat 'ddm-m-myyyy' This will give Underfull \hbox (badness 7832) in paragraph at lines 35636--35644 \OT1/cmr/m/n/10 NA(s) in some lo-cales; set-ting the C lo-cale as in the com- Underfull \hbox (badness 7963) in paragraph at lines 35636--35644 \OT1/cmr/m/n/10 mented lines will over-come this on most sys-tems. lct <- Underfull \hbox (badness 10000) in paragraph at lines 35636--35644 \OT1/cmr/m/n/10 Sys.getlocale("LC$[]\OML/cmm/m/it/10 IME\OT1/cmr/m/n/10 "); \OM L/cmm/m/it/10 Sys:setlocale\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 LC[]IME\OT1/cmr/m /n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 C\OT1/cmr/m/n/10 ") \OML/cmm/m/it/10 x < Underfull \hbox (badness 10000) in paragraph at lines 35636--35644 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 c\OT1/cmr/m/n/10 ("1\OML/cmm/m/it/10 jan\O T1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "2\OML/cmm/m/it/10 jan\OT 1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "31\OML/cmm/m/it/10 mar\OT 1/cmr/m/n/10 1960"\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "30\OML/cmm/m/it/10 jul\OT 1/cmr/m/n/10 1960")\OML/cmm/m/it/10 z < ! You can't use `macro parameter character #' in vertical mode. l.35645 # # read in date/time info in format 'm/d/y h:m:s' ! You can't use `macro parameter character #' in vertical mode. l.35645 ## read in date/time info in format 'm/d/y h:m:s' Underfull \hbox (badness 1320) in paragraph at lines 35645--35650 \OT1/cmr/m/n/10 "02/27/92", "01/14/92", "02/28/92", "02/01/92") times <- c("23: 03:20", [347]] [92 ! You can't use `macro parameter character #' in vertical mode. l.35651 # # time with fractional seconds ! You can't use `macro parameter character #' in vertical mode. l.35651 ## time with fractional seconds ! You can't use `macro parameter character #' in horizontal mode. l.35653 z # prints without fractional seconds ! You can't use `macro parameter character #' in vertical mode. l.35658 # # time zones name are not portable, but 'EST5EDT' comes pretty close. ! You can't use `macro parameter character #' in vertical mode. l.35658 ## time zones name are not portable, but 'EST5EDT' comes pretty close. ! You can't use `macro parameter character #' in vertical mode. l.35663 # # An RFC 822 header (Eastern Canada, during DST) ! You can't use `macro parameter character #' in vertical mode. l.35663 ## An RFC 822 header (Eastern Canada, during DST) ! You can't use `macro parameter character #' in vertical mode. l.35666 # # Make sure you know what the abbreviated names are for you if you ... ! You can't use `macro parameter character #' in vertical mode. l.35666 ## Make sure you know what the abbreviated names are for you if you ... ! You can't use `macro parameter character #' in horizontal mode. l.35667 # # to use them for input (they are matched case-insensitively): ! You can't use `macro parameter character #' in horizontal mode. l.35667 ## to use them for input (they are matched case-insensitively): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35670 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35671 \end{Examples} ! Undefined control sequence. l.35672 \HeaderA {strrep}{Repeat the Elements of a Character Vector}{strrep} ! Undefined control sequence. l.35673 \keyword {character}{strrep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35675 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35679 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35681 \begin{Usage} Underfull \hbox (badness 5064) in paragraph at lines 35666--35682 []\OT1/cmr/m/n/10 Make sure you know what the ab-bre-vi-ated names are for you Underfull \hbox (badness 10000) in paragraph at lines 35666--35682 \OT1/cmr/m/n/10 if you wish to use them for in-put (they are matched case- Underfull \hbox (badness 1584) in paragraph at lines 35666--35682 \OT1/cmr/m/n/10 insensitively): format(seq.Date(as.Date('1978-01-01'), by = 'da y', len = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35685 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for ]explanation. Type H for immediate help. ... l.35687 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35688 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35689 \item[\code{x}] a character vector, or an object which can be coerce... ! Undefined control sequence. l.35690 character vector using \code {as.character}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35691 \item[\code{times}] an integer vector giving the (non-negative) numb... ! Undefined control sequence. l.35692 ...repeat the respective elements of \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35693 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35694 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35696 \begin{Details} \relax ! Undefined control sequence. l.35697 The elements of \code {x} and \code{times} will be recycled as ! Undefined control sequence. l.35697 The elements of \code{x} and \code {times} will be recycled as ! Undefined control sequence. l.35699 returned). Missing elements in \code {x} or \code{times} result in ! Undefined control sequence. l.35699 ... Missing elements in \code{x} or \code {times} result in ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35701 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35703 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35706 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35708 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35709 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.35712 # # Create vectors with the given numbers of spaces: ! You can't use `macro parameter character #' in horizontal mode. l.35712 ## Create vectors with the given numbers of spaces: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35714 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35715 \end{Examples} ! Undefined control sequence. l.35716 \HeaderA {strsplit}{Split the Elements of a Character Vector}{strsplit} ! Undefined control sequence. l.35717 \keyword {character}{strsplit} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35719 \begin{Description} \relax ! Undefined control sequence. l.35720 ...he elements of a character vector \code {x} into substrings ! Undefined control sequence. l.35721 ...rding to the matches to substring \code {split} within them. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35722 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35724 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35728 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35730 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35731 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35732 \item[\code{x}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [93 l.35736 \item[\code{split}] ! Undefined control sequence. l.35738 containing \LinkA {regular expression}{regular expression}(s) (unless... ! Undefined control sequence. l.35738 ...n}{regular expression}(s) (unless \code {fixed = TRUE}) ! Undefined control sequence. l.35740 \code {split} has length 0, \code{x} is split into single characters. ! Undefined control sequence. l.35740 \code{split} has length 0, \code {x} is split into single characters. ! Undefined control sequence. l.35741 If \code {split} has length greater than 1, it is re-cycled along ! Undefined control sequence. l.35742 \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35744 \item[\code{fixed}] ! Undefined control sequence. l.35745 logical. If \code {TRUE} match \code{split} exactly, otherwise ! Undefined control sequence. l.35745 logical. If \code{TRUE} match \code {split} exactly, otherwise ! Undefined control sequence. l.35746 ...r expressions. Has priority over \code {perl}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35748 \item[\code{perl}] logical. Should Perl-compatible regexps be used? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35749 \item[\code{useBytes}] logical. If \code{TRUE} the matching is done ! Undefined control sequence. l.35749 \item[\code{useBytes}] logical. If \code {TRUE} the matching is done ! Undefined control sequence. l.35752 ...input is found which is marked as \code {"bytes"} ! Undefined control sequence. l.35753 (see \code {\LinkA{Encoding}{Encoding}}). ! Undefined control sequence. l.35753 (see \code{\LinkA {Encoding}{Encoding}}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35754 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35755 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35757 \begin{Details} \relax ! Undefined control sequence. l.35758 Argument \code {split} will be coerced to character, so ! Undefined control sequence. l.35759 you will see uses with \code {split = NULL} to mean ! Undefined control sequence. l.35760 \code {split = character(0)}, including in the examples below. ! Undefined control sequence. l.35763 \code {split = character(0)} or \code{split = ""}; the two are ! Undefined control sequence. l.35763 \code{split = character(0)} or \code {split = ""}; the two are [348]] ! Undefined control sequence. l.35769 A missing value of \code {split} does not split the corresponding ! Undefined control sequence. l.35770 element(s) of \code {x} at all. ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35773 \begin{alltt} repeat \{ ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35783 \end{alltt} ! Undefined control sequence. l.35786 ...he first element of the output is \code {""}, but ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35791 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35793 \begin{Value} ! Undefined control sequence. l.35794 A list of the same length as \code {x}, the \code{i}-th element of which ! Undefined control sequence. l.35794 ... the same length as \code{x}, the \code {i}-th element of which ! Undefined control sequence. l.35795 contains the vector of splits of \code {x[i]}. ! Undefined control sequence. l.35797 If any element of \code {x} or \code{split} is declared to be in UTF-8 ! Undefined control sequence. l.35797 If any element of \code{x} or \code {split} is declared to be in UTF-8 ! Undefined control sequence. l.35798 (see \code {\LinkA{Encoding}{Encoding}}), all non-ASCII character str... ! Undefined control sequence. l.35798 (see \code{\LinkA {Encoding}{Encoding}}), all non-ASCII character str... ! Undefined control sequence. l.35800 For \code {perl = TRUE, useBytes = FALSE} all non-ASCII strings in a ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35802 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35804 \begin{SeeAlso} \relax ! Undefined control sequence. l.35805 \code {\LinkA{paste}{paste}} for the reverse, ! Undefined control sequence. l.35805 \code{\LinkA {paste}{paste}} for the reverse, ! Undefined control sequence. l.35806 \code {\LinkA{grep}{grep}} and \code{\LinkA{sub}{sub}} for string sea... ! Undefined control sequence. l.35806 \code{\LinkA {grep}{grep}} and \code{\LinkA{sub}{sub}} for string sea... ! Undefined control sequence. l.35806 \code{\LinkA{grep}{grep}} and \code {\LinkA{sub}{sub}} for string sea... ! Undefined control sequence. l.35806 \code{\LinkA{grep}{grep}} and \code{\LinkA {sub}{sub}} for string sea... ! Undefined control sequence. l.35807 manipulation; Underfull \hbox (badness 10000) in paragraph at lines 8057--8066 []@texttt debug[] @textrm can be used for hid-den func-tions and S3 meth-ods by e.g. [94also \code {\LinkA{nchar}{nchar}}, \code{\LinkA{substr}... ! Undefined control sequence. l.35807 manipulation; also \code{\LinkA {nchar}{nchar}}, \code{\LinkA{substr}... ! Undefined control sequence. l.35807 ...also \code{\LinkA{nchar}{nchar}}, \code {\LinkA{substr}{substr}}. ! Undefined control sequence. l.35807 ...ode{\LinkA{nchar}{nchar}}, \code{\LinkA {substr}{substr}}. ! Undefined control sequence. l.35809 `\LinkA {regular expression}{regular expression}' for the details of ... ! Undefined control sequence. l.35812 Option \code {PCRE\_use\_JIT} controls the details when \code{perl = ... ! Undefined control sequence. l.35812 ...e\_JIT} controls the details when \code {perl = TRUE}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35813 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35815 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35816 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.35820 # split x on the letter e ! You can't use `macro parameter character #' in horizontal mode. l.35824 # # [1] "" "" "" "" "" ! You can't use `macro parameter character #' in horizontal mode. l.35824 ## [1] "" "" "" "" "" ! You can't use `macro parameter character #' in horizontal mode. l.35825 # # Note that 'split' is a regexp! ! You can't use `macro parameter character #' in horizontal mode. l.35825 ## Note that 'split' is a regexp! ! You can't use `macro parameter character #' in horizontal mode. l.35826 # # If you really want to split on '.', use ! You can't use `macro parameter character #' in horizontal mode. l.35826 ## If you really want to split on '.', use ! You can't use `macro parameter character #' in horizontal mode. l.35828 # # [1] "a" "b" "c" ! You can't use `macro parameter character #' in horizontal mode. l.35828 ## [1] "a" "b" "c" ! You can't use `macro parameter character #' in horizontal mode. l.35829 # # or ! You can't use `macro parameter character #' in horizontal mode. l.35829 ## or ! You can't use `macro parameter character #' in vertical mode. l.35832 # # a useful function: rev() for strings ! You can't use `macro parameter character #' in vertical mode. l.35832 ## a useful function: rev() for strings Underfull \hbox (badness 2600) in paragraph at lines 35832--35836 []\OT1/cmr/m/n/10 a use-ful func-tion: rev() for strings str-Re-verse <- func-t ion(x) sap- ! You can't use `macro parameter character #' in vertical mode. l.35837 # # get the first names of the members of R-core ! You can't use `macro parameter character #' in vertical mode. l.35837 ## get the first names of the members of R-core ! You can't use `macro parameter character #' in horizontal mode. l.35841 # and reverse them Underfull \hbox (badness 10000) in paragraph at lines 35837--35843 []\OT1/cmr/m/n/10 get the first names of the mem-bers of R-core a <- ! You can't use `macro parameter character #' in vertical mode. l.35844 # # Note that final empty strings are not produced: ]! You can't use `macro parameter character #' in vertical mode. l.35844 ## Note that final empty strings are not produced: ! You can't use `macro parameter character #' in horizontal mode. l.35845 strsplit(paste(c("", "a", ""), collapse="# "), split="#")[[1]] ! You can't use `macro parameter character #' in horizontal mode. l.35845 ...c("", "a", ""), collapse="#"), split="# ")[[1]] ! You can't use `macro parameter character #' in horizontal mode. l.35846 # [1] "" "a" ! You can't use `macro parameter character #' in horizontal mode. l.35847 # # and also an empty string is only produced before a definite match: ! You can't use `macro parameter character #' in horizontal mode. l.35847 ## and also an empty string is only produced before a definite match: ! You can't use `macro parameter character #' in horizontal mode. l.35848 strsplit("", " ")[[1]] # character(0) ! You can't use `macro parameter character #' in horizontal mode. l.35849 strsplit(" ", " ")[[1]] # [1] "" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35850 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35851 \end{Examples} ! Undefined control sequence. l.35852 \HeaderA {strtoi}{Convert Strings to Integers}{strtoi} ! Undefined control sequence. l.35853 \keyword {classes}{strtoi} ! Undefined control sequence. l.35854 \keyword {character}{strtoi} ! Undefined control sequence. l.35855 \keyword {utilities}{strtoi} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35857 \begin{Description} \relax ! Undefined control sequence. l.35859 function \code {strtol}, or choose a suitable base following the C ru... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35860 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35862 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35866 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35868 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35869 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35870 \item[\code{x}] a character vector, or something coercible to this by ! Undefined control sequence. l.35871 \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.35871 \code{\LinkA {as.character}{as.character}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35872 \item[\code{base}] an integer which is between 2 and 36 inclusive, o... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35874 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35875 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35877 \begin{Details} \relax ! Undefined control sequence. l.35878 ...s based on the C library function \code {strtol}. ! Undefined control sequence. l.35880 For the default \code {base = 0L}, the base chosen from the string ! Undefined control sequence. l.35881 representation of that element of \code {x}, so different elements can ! Undefined control sequence. l.35883 ... are that octal constants (prefix \code {0} not ! Undefined control sequence. l.35884 followed by \code {x} or \code{X}) and hexadecimal constants (prefix ! Undefined control sequence. l.35884 followed by \code{x} or \code {X}) and hexadecimal constants (prefix ! Undefined control sequence. l.35885 \code {0x} or \code{0X}) are interpreted as base \code{8} and ! Undefined control sequence. l.35885 \code{0x} or \code {0X}) are interpreted as base \code{8} and ! Undefined control sequence. l.35885 ...code{0X}) are interpreted as base \code {8} and ! Undefined control sequence. l.35886 \code {16}; all other strings are interpreted as base \code{10}. ! Undefined control sequence. l.35886 ...r strings are interpreted as base \code {10}. [349] [95 ! Undefined control sequence. l.35888 For a base greater than \code {10}, letters \code{a} to \code{z} (or ! Undefined control sequence. l.35888 ...e greater than \code{10}, letters \code {a} to \code{z} (or ! Undefined control sequence. l.35888 ...an \code{10}, letters \code{a} to \code {z} (or ! Undefined control sequence. l.35889 \code {A} to \code{Z}) are used to represent \code{10} to \code{35}. ! Undefined control sequence. l.35889 \code{A} to \code {Z}) are used to represent \code{10} to \code{35}. ! Undefined control sequence. l.35889 ...o \code{Z}) are used to represent \code {10} to \code{35}. ! Undefined control sequence. l.35889 ...re used to represent \code{10} to \code {35}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35890 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35892 \begin{Value} ! Undefined control sequence. l.35893 ...eger vector of the same length as \code {x}. Values which cannot ! Undefined control sequence. l.35895 \code {\LinkA{NA\_integer\_}{NA.Rul.integer.Rul.}}. ! Undefined control sequence. l.35895 \code{\LinkA {NA\_integer\_}{NA.Rul.integer.Rul.}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35896 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35898 \begin{SeeAlso} \relax ! Undefined control sequence. l.35899 For decimal strings \code {\LinkA{as.integer}{as.integer}} is equally... ! Undefined control sequence. l.35899 For decimal strings \code{\LinkA {as.integer}{as.integer}} is equally... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35900 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35902 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35903 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35907 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35908 \end{Examples} ! Undefined control sequence. l.35909 \HeaderA {strtrim}{Trim Character Strings to Specified Display Widths... ! Undefined control sequence. l.35910 \keyword {character}{strtrim} ! Undefined control sequence. l.35911 \keyword {utilities}{strtrim} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35913 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35915 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35917 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35921 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35923 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35924 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35925 \item[\code{x}] a character vector, or an object which can be coerce... ! Undefined control sequence. l.35926 character vector by \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.35926 character vector by \code{\LinkA {as.character}{as.character}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35927 \item[\code{width}] Positive integer values: recycled to the length ... ! Undefined control sequence. l.35927 ...values: recycled to the length of \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35928 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35929 \end{Arguments} ] ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35931 \begin{Details} \relax ! Undefined control sequence. l.35937 Using this function rather than \code {\LinkA{substr}{substr}} is imp... ! Undefined control sequence. l.35937 ... this function rather than \code{\LinkA {substr}{substr}} is impor... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35940 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35942 \begin{Value} ! Undefined control sequence. l.35944 as \code {x} (after possible coercion). ! Undefined control sequence. l.35947 the current locale (see \code {\LinkA{Encoding}{Encoding}}) if the co... ! Undefined control sequence. l.35947 the current locale (see \code{\LinkA {Encoding}{Encoding}}) if the co... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35950 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35952 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35953 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35955 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35956 \end{Examples} ! Undefined control sequence. l.35957 \HeaderA {structure}{Attribute Specification}{structure} ! Undefined control sequence. l.35958 \keyword {attribute}{structure} ! Undefined control sequence. l.35959 \keyword {manip}{structure} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35961 \begin{Description} \relax ! Undefined control sequence. l.35962 \code {structure} returns the given object with further ! Undefined control sequence. l.35963 \LinkA {attributes}{attributes} set. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35964 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35966 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35970 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35972 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35973 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35974 \item[\code{.Data}] an object which will have ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35976 \item[\code{...}] attributes, specified in \code{tag = value} ! Undefined control sequence. l.35976 ...de{...}] attributes, specified in \code {tag = value} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35978 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35979 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35981 \begin{Details} \relax ! Undefined control sequence. l.35982 Adding a class \code {"factor"} will ensure that numeric codes are ! Undefined control sequence. l.35986 attributes \code {".Dim"}, \code{".Dimnames"}, \code{".Names"}, ! Undefined control sequence. l.35986 attributes \code{".Dim"}, \code {".Dimnames"}, \code{".Names"}, ! Undefined control sequence. l.35986 ...code{".Dim"}, \code{".Dimnames"}, \code {".Names"}, ! Undefined control sequence. l.35987 \code {".Tsp"} and \code{".Label"} are renamed to \code{"dim"}, ! Undefined control sequence. l.35987 \code{".Tsp"} and \code {".Label"} are renamed to \code{"dim"}, ! Undefined control sequence. l.35987 ...nd \code{".Label"} are renamed to \code {"dim"}, ! Undefined control sequence. l.35988 \code {"dimnames"}, \code{ [96"names"}, \code{"tsp"} and \code{"levels"}. ! Undefined control sequence. l.35988 \code{"dimnames"}, \code {"names"}, \code{"tsp"} and \code{"levels"}. ! Undefined control sequence. l.35988 \code{"dimnames"}, \code{"names"}, \code {"tsp"} and \code{"levels"}. ! Undefined control sequence. l.35988 ... \code{"names"}, \code{"tsp"} and \code {"levels"}. ! Undefined control sequence. l.35992 using \code {tag = NULL} removes attribute \code{tag} from \code{.Dat... ! Undefined control sequence. l.35992 ...ode{tag = NULL} removes attribute \code {tag} from \code{.Data} if ! Undefined control sequence. l.35992 ...removes attribute \code{tag} from \code {.Data} if ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35994 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35996 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36000 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36002 \begin{SeeAlso} \relax ! Undefined control sequence. l.36003 \code {\LinkA{attributes}{attributes}}, \code{\LinkA{attr}{attr}}. ! Undefined control sequence. l.36003 \code{\LinkA {attributes}{attributes}}, \code{\LinkA{attr}{attr}}. ! Undefined control sequence. l.36003 ...{\LinkA{attributes}{attributes}}, \code {\LinkA{attr}{attr}}. ! Undefined control sequence. l.36003 ...{attributes}{attributes}}, \code{\LinkA {attr}{attr}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36004 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36006 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36007 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36009 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36010 \end{Examples} ! Undefined control sequence. l.36011 \HeaderA {strwrap}{Wrap Character Strings to Format Paragraphs}{strwrap} ! Undefined control sequence. l.36012 \keyword {character}{strwrap} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36014 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36020 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36022 \begin{Usage} [350]] Overfull \hbox (6.74693pt too wide) in paragraph at lines 36026--36026 [] \OT1/cmtt/m/n/10 exdent = 0, prefix = "", simplify = TRUE, initial = prefix)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36027 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36029 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36030 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36031 \item[\code{x}] a character vector, or an object which can be conver... ! Undefined control sequence. l.36032 character vector by \code {\LinkA{as.character}{as.character}}. ! Undefined control sequence. l.36032 character vector by \code{\LinkA {as.character}{as.character}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36033 \item[\code{width}] a positive integer giving the target column for ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36035 \item[\code{indent}] a non-negative integer giving the indentation o... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36037 \item[\code{exdent}] a non-negative integer specifying the indentati... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36039 \item[\code{prefix, initial}] a character string to be used as prefi... ! Undefined control sequence. l.36040 ... line except the first, for which \code {initial} is used. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36041 \item[\code{simplify}] a logical. If \code{TRUE}, the result is a s... ! Undefined control sequence. l.36041 ...m[\code{simplify}] a logical. If \code {TRUE}, the result is a si... ! Undefined control sequence. l.36043 length as \code {x} the elements of which are character vectors of ! Undefined control sequence. l.36044 ...from the corresponding element of \code {x}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36047 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36048 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36050 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36059 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36061 \begin{Value} ! Undefined control sequence. l.36062 A character vector (if \code {simplify} is \code{TRUE}), or a list of ! Undefined control sequence. l.36062 ...ter vector (if \code{simplify} is \code {TRUE}), or a list of ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36064 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36066 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36067 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36068 # # Read in file 'THANKS'. ! You can't use `macro parameter character #' in horizontal mode. l.36068 ## Read in file 'THANKS'. ! Undefined control sequence. l.36069 ...home("doc"), "THANKS")), collapse = "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.36070 # # Split into paragraphs and remove the first three ones ! You can't use `macro parameter character #' in horizontal mode. l.36070 ## Split into paragraphs and remove the first three ones ! Undefined control sequence. l.36071 x <- unlist(strsplit(x, "\n [ \t\n]*\n"))[-(1:3)] ! Undefined control sequence. \@use@text@encoding \@curr@enc \n l.36071 x <- unlist(strsplit(x, "\n[ \t\n ]*\n"))[-(1:3)] ! Undefined control sequence. \@use@text@encoding \@curr@enc \n l.36071 x <- unlist(strsplit(x, "\n[ \t\n ]*\n"))[-(1:3)] ! Undefined control sequence. l.36071 x <- unlist(strsplit(x, "\n[ \t\n]*\n "))[-(1: Underfull \hbox (badness 10000) in paragraph at lines 8282--8288 []@texttt valgrind[] @textrm is good at spot-ting the use of unini-tial-ized va l-ues: use op-tion Underfull \hbox (badness 10000) in paragraph at lines 8321--8331 @textrm See [][]@texttt http://clang.llvm.org/docs/UsersManual.html#controlling -code-generation[][][]@textrm , Overfull \hbox (39.30319pt too wide) in paragraph at lines 8335--8336 [][][]@smallrm see [][]@smalltt http://llvm.org/devmtg/2014-04/PDFs/LightningTa lks/EuroLLVM%202014%20--%20container%20overflow.pdf[][][]@smallrm .| [973)] ! You can't use `macro parameter character #' in horizontal mode. l.36072 # # Join the rest ! You can't use `macro parameter character #' in horizontal mode. l.36072 ## Join the rest ! Undefined control sequence. l.36073 x <- paste(x, collapse = "\n \n") ! Undefined control sequence. l.36073 x <- paste(x, collapse = "\n\n ") ! You can't use `macro parameter character #' in horizontal mode. l.36074 # # Now for some fun: ! You can't use `macro parameter character #' in horizontal mode. l.36074 ## Now for some fun: ! You can't use `macro parameter character #' in vertical mode. l.36080 # # Note that messages are wrapped AT the target column indicated by ! You can't use `macro parameter character #' in vertical mode. l.36080 ## Note that messages are wrapped AT the target column indicated by ! You can't use `macro parameter character #' in horizontal mode. l.36081 # # 'width' (and not beyond it). ! You can't use `macro parameter character #' in horizontal mode. l.36081 ## 'width' (and not beyond it). ! You can't use `macro parameter character #' in horizontal mode. l.36082 # # From an R-devel posting by J. Hosking . ! You can't use `macro parameter character #' in horizontal mode. l.36082 ## From an R-devel posting by J. Hosking . ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36088 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36089 \end{Examples} ! Undefined control sequence. l.36090 \HeaderA {subset}{Subsetting Vectors, Matrices and Data Frames}{subset} ! Undefined control sequence. l.36091 \methaliasA {subset.data.frame}{subset}{subset.data.frame} ! Undefined control sequence. l.36092 \methaliasA {subset.default}{subset}{subset.default} ! Undefined control sequence. l.36093 \methaliasA {subset.matrix}{subset}{subset.matrix} ! Undefined control sequence. l.36094 \keyword {manip}{subset} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36096 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36098 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36100 \begin{Usage} Underfull \hbox (badness 2753) in paragraph at lines 36080--36101 \OT1/cmr/m/n/10 x <- paste(sapply(sample(10, 100, re-place = TRUE), func-tion(x ) sub- [351]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36113 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36115 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36116 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36117 \item[\code{x}] object to be subsetted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36118 \item[\code{subset}] logical expression indicating elements or rows ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36120 \item[\code{select}] expression, indicating columns to select from a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36122 \item[\code{drop}] passed on to \code{[} indexing operator. ! Undefined control sequence. l.36122 \item[\code{drop}] passed on to \code {[} indexing operator. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36123 \item[\code{...}] further arguments to be passed to or from other me... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36124 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36125 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36127 \begin{Details} \relax ! Undefined control sequence. l.36133 \code {x[subset \& !is.na(subset)]}. ! Undefined control sequence. l.36135 For data frames, the \code {subset} argument works on the rows. Note ! Undefined control sequence. l.36136 that \code {subset} will be evaluated in the data frame, so columns can ! Undefined control sequence. l.36139 The \code {select} argument exists only for the methods for data frames ! Undefined control sequence. l.36147 The \code {drop} argument is passed on to the indexing method for ! Undefined control sequence. l.36152 not automatically removed. See \code {\LinkA{droplevels}{droplevels}... ! Undefined control sequence. l.36152 ...utomatically removed. See \code{\LinkA {droplevels}{droplevels}} ... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36155 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36157 \begin{Value} ! Undefined control sequence. l.36158 An object similar to \code {x} contain just the selected elements (for ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36160 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36162 \begin{Section} {Warning} ! Undefined control sequence. l.36165 \code {\LinkA{[}{[}}, and in particular the non-standard evaluation of ! Undefined control sequence. l.36165 \code{\LinkA {[}{[}}, and in particular the non-standard evaluation of ! Undefined control sequence. l.36166 argument \code {subset} can have unanticipated consequences. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36167 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36169 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36171 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36173 \begin{SeeAlso} \relax ! Undefined control sequence. l.36174 \code {\LinkA{[}{[}}, ! Undefined control sequence. l.36174 \code{\LinkA {[}{[}}, ! Undefined control sequence. l.36175 \code {\LinkA{transform}{transform}} ! Undefined control sequence. l.36175 \code{\LinkA {transform}{transform}} ! Undefined control sequence. l.36176 \code {\LinkA{droplevels}{droplevels}} ! Undefined control sequence. l.36176 \code{\LinkA {droplevels}{droplevels}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaT Underfull \hbox (badness 4913) in paragraph at lines 8364--8367 [][][]@smallrm installed on some Linux sys-tems as @smalltt asan_symbolize[]@sm allrm , and ob-tain-able from [][]@smalltt https://llvm.org/ Underfull \hbox (badness 10000) in paragraph at lines 8364--8367 @smalltt svn/llvm-project/compiler-rt/trunk/lib/asan/scripts/asan_symbolize.py[ ][][]@smallrm : it makes use of Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 []@textrm For op-tions avail-able @textit via @textrm the en-vi-ron-ment vari-a ble @texttt ASAN_OPTIONS[] @textrm see Underfull \hbox (badness 10000) in paragraph at lines 8403--8408 [][]@texttt https://code.google.com/p/address-sanitizer/wiki/AddressSanitizerFL ags[][][]@textrm . Underfull \hbox (badness 10000) in paragraph at lines 8419--8423 []@textrm Recent ver-sions$[]$ added the flag `@texttt -fsanitize-address-use-a fter-scope[]@textrm '[]: see [98eX Companion for explanation. Type H for immediate help. ... l.36177 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36179 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36180 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.36187 # # sometimes requiring a logical 'subset' argument is a nuisance ! You can't use `macro parameter character #' in vertical mode. l.36187 ## sometimes requiring a logical 'subset' argument is a nuisance ! Missing $ inserted. $ l.36189 start_ with_M <- nm %in% grep("^M", nm, value = TRUE) ! You can't use `macro parameter character #' in math mode. l.36191 # but in recent versions of R this can simply be ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36193 \end{ExampleCode} ! Missing $ inserted. $ l.36193 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36194 \end{Examples} ! Undefined control sequence. l.36195 \HeaderA {substitute}{Substituting and Quoting Expressions}{substitute} ! Undefined control sequence. l.36196 \aliasA {enquote}{substitute}{enquote} ! Undefined control sequence. l.36197 \aliasA {quote}{substitute}{quote} ! Undefined control sequence. l.36198 \keyword {programming}{substitute} ! Undefined control sequence. l.36199 \keyword {data}{substitute} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36201 \begin{Description} \relax ! Undefined control sequence. l.36202 \code {substitute} returns the parse tree for the (unevaluated) ! Undefined control sequence. l.36203 expression \code {expr}, substituting any variables bound in ! Undefined control sequence. l.36204 \code {env}. Overfull \hbox (73.15144pt too wide) in paragraph at lines 36187--36205 \OML/cmm/m/it/10 Murder\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 butinrecentversionsofR thiscansimplybesubset\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 state:x\OT1/cmr/m/n/10 7 7\OML/cmm/m/it/10 ; grepl\OT1/cmr/m/n/10 ("[]"\OML/cmm/m/it/10 ; nm\OT1/cmr/m/n /10 )\OML/cmm/m/it/10 ; Illiteracy \OT1/cmr/m/n/10 : Underfull \hbox (badness 1152) in paragraph at lines 36187--36205 \OT1/cmr/m/n/10 sub-sti-tute re-turns the parse tree for the (un-eval-u-ated) e x-pres-sion expr, ! Undefined control sequence. l.36206 \code {quote} simply returns its argument. The argument is not evaluated ! Undefined control sequence. l.36209 \code {enquote} is a simple one-line utility which transforms a call of ! Undefined control sequence. l.36210 the form \code {Foo(....)} into the call \code{quote(Foo(....))}. This ! Undefined control sequence. l.36210 ...rm \code{Foo(....)} into the call \code {quote(Foo(....))}. This ! Undefined control sequence. l.36211 is typically used to protect a \code {\LinkA{call}{call}} from early ... ! Undefined control sequence. l.36211 ...ypically used to protect a \code{\LinkA {call}{call}} from early e... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36212 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36214 \begin{Usage} [352]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36220 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36222 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36223 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36224 \item[\code{expr}] any syntactically valid \R{} expression ! Undefined control sequence. l.36224 ...\code{expr}] any syntactically valid \R {} expression ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36225 \item[\code{cl}] a \code{\LinkA{call}{call}}, i.e., an \R{} object of ! Undefined control sequence. l.36225 \item[\code{cl}] a \code {\LinkA{call}{call}}, i.e., an \R{} object of ! Undefined control sequence. l.36225 \item[\code{cl}] a \code{\LinkA {call}{call}}, i.e., an \R{} object of ! Undefined control sequence. l.36225 ... \code{\LinkA{call}{call}}, i.e., an \R {} object of ! Undefined control sequence. l.36226 \code {\LinkA{class}{class}} (and \code{\LinkA{mode}{mode}}) \code{"c... ! Undefined control sequence. l.36226 \code{\LinkA {class}{class}} (and \code{\LinkA{mode}{mode}}) \code{"c... ! Undefined control sequence. l.36226 \code{\LinkA{class}{class}} (and \code {\LinkA{mode}{mode}}) \code{"c... ! Undefined control sequence. l.36226 ...\LinkA{class}{class}} (and \code{\LinkA {mode}{mode}}) \code{"call"}. ! Undefined control sequence. l.36226 ...} (and \code{\LinkA{mode}{mode}}) \code {"call"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36227 \item[\code{env}] an environment or a list object. Defaults to the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36229 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36230 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36232 \begin{Details} \relax ! Undefined control sequence. l.36233 The typical use of \code {substitute} is to create informative labels ! Undefined control sequence. l.36235 The \code {myplot} example below shows a simple use of this facility. ! Undefined control sequence. l.36236 It uses the functions \code {\LinkA{deparse}{deparse}} and \code{subs... ! Undefined control sequence. l.36236 It uses the functions \code{\LinkA {deparse}{deparse}} and \code{subs... ! Undefined control sequence. l.36236 ...ode{\LinkA{deparse}{deparse}} and \code {substitute} ! Undefined control sequence. l.36238 ... actual arguments to the function \code {myplot}. ! Undefined control sequence. l.36241 ...s: If it is not a bound symbol in \code {env}, it is ! Undefined control sequence. l.36243 function or explicitly created using \code {\LinkA{delayedAssign}{del... ! Undefined control sequence. l.36243 ...r explicitly created using \code{\LinkA {delayedAssign}{delayedAss... ! Undefined control sequence. l.36245 ... its value is substituted, unless \code {env} is ! Undefined control sequence. l.36246 \code {\LinkA{.GlobalEnv}{.GlobalEnv}} in which case the symbol is le... ! Undefined control sequence. l.36246 \code{\LinkA {.GlobalEnv}{.GlobalEnv}} in which case the symbol is le... ! Undefined control sequence. l.36248 Both \code {quote} and \code{substitute} are `special' ! Undefined control sequence. l.36248 Both \code{quote} and \code {substitute} are `special' ! Undefined control sequence. l.36249 \LinkA {primitive}{primitive} functions which do not evaluate their a... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36250 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36252 \begin{Value} ! Undefined control sequence. l.36253 The \code {\LinkA{mode}{mode}} of the result is generally \code{"call... ! Undefined control sequence. l.36253 The \code{\LinkA {mode}{mode}} of the result is generally \code{"call... ! Undefined control sequence. l.36253 ...mode}} of the result is generally \code {"call"} but ! Undefined control sequence. l.36255 expressions have mode \code {"name"} and constants have the ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36257 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36259 \begin{Note} \relax ! Undefined control sequence. l.36260 \code {substitute} works on a purely lexical basis. There is no ! Undefined control sequence. l.36264 \code {expression(...)}. The result is a call to the ! Undefined control sequence. l.36265 \code {\LinkA{expression}{expression}} constructor function and needs... ! Undefined control sequence. l.36265 \code{\LinkA {expression}{expression}} constructor function and needs... ! Undefined control sequence. l.36266 with \code {\LinkA{eval}{eval}} to give the actual expression object. ! Undefined control sequence. l.36266 with \code{\LinkA {eval}{eval}} to give the actual expression object. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36267 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36269 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36273 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36275 \begin{SeeAlso} \relax ! Undefined control sequence. l.36276 \code {\LinkA{missing}{missing}} for argument `missingness', ! Undefined control sequence. l.36276 \code{\LinkA {missing}{missing}} for argument `missingness', ! Undefined control sequence. l.36277 \code {\LinkA{bquote}{bquote}} for partial substitution, ! Undefined control sequence. l.36277 \code{\LinkA {bquote}{bquote}} for partial substitution, ! Undefined control sequence. l.36278 \code {\LinkA{sQuote}{sQuote}} and \code{\LinkA{dQuote}{dQuote}} for ... ! Undefined control sequence. l.36278 \code{\LinkA {sQuote}{sQuote}} and \code{\LinkA{dQuote}{dQuote}} for ... ! Undefined control sequence. l.36278 \code{\LinkA{sQuote}{sQuote}} and \code {\LinkA{dQuote}{dQuote}} for ... ! Undefined control sequence. l.36278 ...LinkA{sQuote}{sQuote}} and \code{\LinkA {dQuote}{dQuote}} for addi... ! Undefined control sequence. l.36281 \code {\LinkA{all.names}{all.names}} to retrieve the symbol names fro... ! Undefined control sequence. l.36281 \code{\LinkA {all.names}{all.names}} to retrieve the symbol names fro... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36283 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36285 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36286 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36288 ...ute(expression(a + b), list(a = 1))) # Overfull \hbox (56.55324pt too wide) in paragraph at lines 8467--8467 []@texttt setenv ASAN_OPTIONS 'alloc_dealloc_mismatch=0:detect_leaks=0:detect_ odr_violation=0'[] Underfull \hbox (badness 10000) in paragraph at lines 8495--8497 []@textrm This san-i-tizer can be com-bined with the Ad-dress San-i-tizer by Underfull \hbox (badness 6542) in paragraph at lines 8533--8538 []@textrm See [][]@texttt https://gcc.gnu.org/onlinedocs/gcc/Instrumentation-Op tions.html[][][] @textrm (or the [99 > expression(1 + b) ! You can't use `macro parameter character #' in horizontal mode. l.36289 ...ute( a + b, list(a = 1))) # > 1 + b ! You can't use `macro parameter character #' in horizontal mode. l.36290 c(mode(s.e), typeof(s.e)) # "call", "language" ! You can't use `macro parameter character #' in horizontal mode. l.36291 c(mode(s.s), typeof(s.s)) # (the same) ! You can't use `macro parameter character #' in horizontal mode. l.36292 # but: ! You can't use `macro parameter character #' in horizontal mode. l.36293 (e.s.e <- eval(s.e)) # > expression(1 + b) ! You can't use `macro parameter character #' in horizontal mode. l.36294 c(mode(e.s.e), typeof(e.s.e)) # "expression", "expression" ! You can't use `macro parameter character #' in horizontal mode. l.36296 substitute(x <- x + 1, list(x = 1)) # nonsense ! You can't use `macro parameter character #' in vertical mode. l.36302 # # Simple examples about lazy evaluation, etc: ! You can't use `macro parameter character #' in vertical mode. l.36302 ## Simple examples about lazy evaluation, etc: ! You can't use `macro parameter character #' in horizontal mode. l.36308 f1(a) # 11 ! You can't use `macro parameter character #' in horizontal mode. l.36309 s1(a) # 11 ! You can't use `macro parameter character #' in horizontal mode. l.36310 s2(a) # a ! You can't use `macro parameter character #' in horizontal mode. l.36311 typeof(s2(a)) # "symbol" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36312 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36313 \end{Examples} ! Undefined control sequence. l.36314 \HeaderA {substr}{Substrings of a Character Vector}{substr} ! Undefined control sequence. l.36315 \aliasA {substr<\Rdash{}}{substr}{substr<.Rdash.} ! Undefined control sequence. l.36315 \aliasA{substr<\Rdash {}}{substr}{substr<.Rdash.} ! Undefined control sequence. l.36316 \aliasA {substring}{substr}{substring} ! Undefined control sequence. l.36317 \aliasA {substring<\Rdash{}}{substr}{substring<.Rdash.} ! Undefined control sequence. l.36317 \aliasA{substring<\Rdash {}}{substr}{substring<.Rdash.} ! Undefined control sequence. l.36318 \keyword {character}{substr} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36320 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36322 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36324 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36331 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36333 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36334 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36335 \item[\code{x, text}] a character vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36336 \item[\code{start, first}] integer. The first element to be replaced. [353]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36337 \item[\code{stop, last}] integer. The last element to be replaced. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36338 \item[\code{value}] a character vector, recycled if necessary. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36339 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36340 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36342 \begin{Details} \relax ! Undefined control sequence. l.36343 \code {substring} is compatible with S, with \code{first} and ! Undefined control sequence. l.36343 ...tring} is compatible with S, with \code {first} and ! Undefined control sequence. l.36344 \code {last} instead of \code{start} and \code{stop}. ! Undefined control sequence. l.36344 \code{last} instead of \code {start} and \code{stop}. ! Undefined control sequence. l.36344 ...last} instead of \code{start} and \code {stop}. ! Undefined control sequence. l.36348 When extracting, if \code {start} is larger than the string length then ! Undefined control sequence. l.36349 \code {""} is returned. ! Undefined control sequence. l.36351 For the extraction functions, \code {x} or \code{text} will be ! Undefined control sequence. l.36351 ...extraction functions, \code{x} or \code {text} will be ! Undefined control sequence. l.36352 converted to a character vector by \code {\LinkA{as.character}{as.cha... ! Undefined control sequence. l.36352 ...d to a character vector by \code{\LinkA {as.character}{as.characte... ! Undefined control sequence. l.36355 For the replacement functions, if \code {start} is larger than the ! Undefined control sequence. l.36360 If any argument is an \code {NA} element, the corresponding element of ! Undefined control sequence. l.36361 the answer is \code {NA}. ! Undefined control sequence. l.36364 the current locale (see \code {\LinkA{Encoding}{Encoding}} if the cor... ! Undefined control sequence. l.36364 the current locale (see \code{\LinkA {Encoding}{Encoding}} if the cor... ! Undefined control sequence. l.36368 If an input element has declared \code {"bytes"} encoding (see ! Undefined control sequence. l.36369 \code {\LinkA{Encoding}{Encoding}}, the subsetting is done in units o... ! Undefined control sequence. l.36369 \code{\LinkA {Encoding}{Encoding}}, the subsetting is done in units o... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36371 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36373 \begin{Value} ! Undefined control sequence. l.36374 For \code {substr}, a character vector of the same length and with the ! Undefined control sequence. l.36375 same attributes as \code {x} (after possible coercion). ! Undefined control sequence. l.36377 For \code {substring}, a character vector of length the longest of the ! Undefined control sequence. l.36378 ... This will have names taken from \code {x} (if it has any ! Undefined control sequence. l.36380 \code {x} if it is the longest of the arguments). ! Undefined control sequence. l.36382 Elements of \code {x} with a declared encoding (see ! Undefined control sequence. l.36383 \code {\LinkA{Encoding}{Encoding}}) will be returned with the same en... ! Undefined control sequence. l.36383 \code{\LinkA {Encoding}{Encoding}}) will be returned with the same en... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36384 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36386 \begin{Note} \relax ! Undefined control sequence. l.36387 The S4 version of \code {substring<-} ignores \code{last}; this version ! Undefined control sequence. l.36387 ...ion of \code{substring<-} ignores \code {last}; this version ! Undefined control sequence. l.36390 These functions are often used with \code {\LinkA{nchar}{nchar}} to t... ! Undefined control sequence. l.36390 ...ctions are often used with \code{\LinkA {nchar}{nchar}} to truncate a ! Undefined control sequence. l.36393 \code {\LinkA{strtrim}{strtrim}}), but at least make sure you use the... ! Undefined control sequence. l.36393 \code{\LinkA {strtrim}{strtrim}}), but at least make sure you use the... ! Undefined control sequence. l.36394 \code {nchar(type = "c")}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36395 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36397 \begin{References} \relax ! Undefined control sequence. l.36400 Wadsworth \& Brooks/Cole. (\code {substring}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36401 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36403 \begin{SeeAlso} \relax ! Undefined control sequence. l.36404 \code {\LinkA{strsplit}{strsplit}}, \code{\LinkA{paste}{paste}}, \cod... ! Undefined control sequence. l.36404 \code{\LinkA {strsplit}{strsplit}}, \code{\LinkA{paste}{paste}}, \cod... ! Undefined control sequence. l.36404 \code{\LinkA{strsplit}{strsplit}}, \code {\LinkA{paste}{paste}}, \cod... ! Undefined control sequence. l.36404 ...inkA{strsplit}{strsplit}}, \code{\LinkA {paste}{paste}}, \code{\Li... ! Undefined control sequence. l.36404 ...t}}, \code{\LinkA{paste}{paste}}, \code {\LinkA{nchar}{nchar}}. ! Undefined control sequence. l.36404 ...ode{\LinkA{paste}{paste}}, \code{\LinkA {nchar}{nchar}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36405 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36407 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36408 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36411 # # strsplit is more efficient ... ! You can't use `macro parameter character #' in horizontal mode. l.36411 ## strsplit is more efficient ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36420 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36421 \end{Examples} ! Undefined control sequence. l.36422 \HeaderA {sum}{Sum of Vector Elements}{sum} ! Undefined control sequence. l.36423 \keyword {arith}{sum} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36425 \begin{Description} \relax ! Undefined control sequence. l.36426 \code {sum} returns the sum of all the values ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36428 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation Underfull \hbox (badness 10000) in paragraph at lines 8556--8560 []@textrm From GCC 8 @texttt signed-integer-overflow[] @textrm will no longer b e a de-fault part Underfull \hbox (badness 7907) in paragraph at lines 8556--8560 @textrm of `@texttt -fsanitize=undefined[]@textrm '[], but can be spec-i-fied s ep-a-rately. It adds op-tions Underfull \hbox (badness 5878) in paragraph at lines 8583--8587 []@textrm For more de-tails on the topic see [][]@texttt http://blog.regehr.org /archives/213[][][] @textrm and Underfull \hbox (badness 10000) in paragraph at lines 8597--8604 []@textrm Recent ver-sions of @texttt clang[] @textrm on `@texttt x86_64[]@text rm '[] Linux have `Thread-San-i-tizer' Underfull \hbox (badness 4441) in paragraph at lines 8597--8604 @textrm ([][]@texttt https://code.google.com/p/thread-sanitizer/[][][]@textrm ) , a `data race de-tec-tor for C/C@texttt ++ Overfull \hbox (50.80455pt too wide) in paragraph at lines 8626--8626 []@texttt Fortran runtime error: Index '1' of dimension 1 of array 'x' above u pper bound of 0[] [100. Type H for immediate help. ... l.36430 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36434 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36436 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36437 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36438 \item[\code{...}] numeric or complex or logical vectors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36439 \item[\code{na.rm}] logical. Should missing values (including \code... ! Undefined control sequence. l.36439 ... Should missing values (including \code {NaN}) be ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36441 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36442 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36444 \begin{Details} \relax ! Undefined control sequence. l.36446 directly or via the \code {\LinkA{Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.36446 directly or via the \code{\LinkA {Summary}{S3groupGeneric}} group gen... ! Undefined control sequence. l.36447 ...s to work properly, the arguments \code {...} should be ! Undefined control sequence. l.36450 If \code {na.rm} is \code{FALSE} an \code{NA} or \code{NaN} value in ! Undefined control sequence. l.36450 If \code{na.rm} is \code {FALSE} an \code{NA} or \code{NaN} value in ! Undefined control sequence. l.36450 If \code{na.rm} is \code{FALSE} an \code {NA} or \code{NaN} value in ! Undefined control sequence. l.36450 ...} is \code{FALSE} an \code{NA} or \code {NaN} value in ! Undefined control sequence. l.36451 ...e arguments will cause a value of \code {NA} or \code{NaN} to ! Undefined control sequence. l.36451 ...ill cause a value of \code{NA} or \code {NaN} to ! Undefined control sequence. l.36452 be returned, otherwise \code {NA} and \code{NaN} values are ignored. ! Undefined control sequence. l.36452 be returned, otherwise \code{NA} and \code {NaN} values are ignored. ! Undefined control sequence. l.36455 For historical reasons, \code {NULL} is accepted and treated as if it ! Undefined control sequence. l.36456 were \code {integer(0)}. [354]] ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36463 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36465 \begin{Value} ! Undefined control sequence. l.36466 The sum. If all of \code {...} are of type integer or logical, then ! Undefined control sequence. l.36467 ...d in that case the result will be \code {NA} (with a ! Undefined control sequence. l.36471 \strong {NB:} the sum of an empty set is zero, by definition. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36472 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36474 \begin{Section} {S4 methods} ! Undefined control sequence. l.36475 This is part of the S4 \code {\LinkA{Summary}{S4groupGeneric}} ! Undefined control sequence. l.36475 This is part of the S4 \code{\LinkA {Summary}{S4groupGeneric}} ! Undefined control sequence. l.36477 \code {x, ..., na.rm}. ! Undefined control sequence. l.36479 `\LinkA {plotmath}{plotmath}' for the use of \code{sum} in plot annot... ! Undefined control sequence. l.36479 ...otmath}{plotmath}' for the use of \code {sum} in plot annotation. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36480 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36482 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36486 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36488 \begin{SeeAlso} \relax ! Undefined control sequence. l.36489 \code {\LinkA{colSums}{colSums}} for row and column sums. ! Undefined control sequence. l.36489 \code{\LinkA {colSums}{colSums}} for row and column sums. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36490 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate [101> [72 help. ... l.36492 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36493 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.36495 # # Pass a vector to sum, and it will add the elements together. ! You can't use `macro parameter character #' in vertical mode. l.36495 ## Pass a vector to sum, and it will add the elements together. ! You can't use `macro parameter character #' in vertical mode. l.36498 # # Pass several numbers to sum, and it also adds the elements. ! You can't use `macro parameter character #' in vertical mode. l.36498 ## Pass several numbers to sum, and it also adds the elements. ! You can't use `macro parameter character #' in vertical mode. l.36501 # # In fact, you can pass vectors into several arguments, and everyth... ! You can't use `macro parameter character #' in vertical mode. l.36501 ## In fact, you can pass vectors into several arguments, and everyth... ! You can't use `macro parameter character #' in vertical mode. l.36504 # # If there are missing values, the sum is unknown, i.e., also missi... ! You can't use `macro parameter character #' in vertical mode. l.36504 ## If there are missing values, the sum is unknown, i.e., also missi... ! You can't use `macro parameter character #' in horizontal mode. l.36506 # # ... unless we exclude missing values explicitly: ! You can't use `macro parameter character #' in horizontal mode. l.36506 ## ... unless we exclude missing values explicitly: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36508 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36509 \end{Examples} ! Undefined control sequence. l.36510 \HeaderA {summary}{Object Summaries}{summary} ! Undefined control sequence. l.36511 \aliasA {format.summaryDefault}{summary}{format.summaryDefault} ! Undefined control sequence. l.36512 \aliasA {print.summaryDefault}{summary}{print.summaryDefault} ! Undefined control sequence. l.36513 \methaliasA {summary.data.frame}{summary}{summary.data.frame} ! Undefined control sequence. l.36514 \methaliasA {summary.default}{summary}{summary.default} ! Undefined control sequence. l.36515 \methaliasA {summary.factor}{summary}{summary.factor} ! Undefined control sequence. l.36516 \methaliasA {summary.matrix}{summary}{summary.matrix} ! Undefined control sequence. l.36517 \keyword {methods}{summary} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36519 \begin{Description} \relax ! Undefined control sequence. l.36520 \code {summary} is a generic function used to produce result summaries ! Undefined control sequence. l.36522 invokes particular \code {\LinkA{methods}{methods}} which depend on the ! Undefined control sequence. l.36522 invokes particular \code{\LinkA ]] {methods}{methods}} which depend on the ! Undefined control sequence. l.36523 \code {\LinkA{class}{class}} of the first argument. ! Undefined control sequence. l.36523 \code{\LinkA {class}{class}} of the first argument. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36524 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36526 \begin{Usage} Underfull \hbox (badness 2119) in paragraph at lines 36504--36527 []\OT1/cmr/m/n/10 If there are miss-ing val-ues, the sum is un-known, i.e., als o miss- Underfull \hbox (badness 2197) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 ing, .... sum(1:5, NA) ... un-less we ex-clude miss-ing val-ue s ex- Underfull \hbox (badness 6047) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 plic-itly: sum(1:5, NA, na.rm = TRUE) sum-ma-ry-Ob-ject Sum- Underfull \hbox (badness 10000) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 maries-sum-mary for-mat.summaryDefaultsummaryformat.summaryDefa ult Underfull \hbox (badness 10000) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 print.summaryDefaultsummaryprint.summaryDefault Underfull \hbox (badness 10000) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 sum-mary.data.framesummarysummary.data.frame Underfull \hbox (badness 10000) in paragraph at lines 36504--36527 \OT1/cmr/m/n/10 sum-mary.defaultsummarysummary.default sum- [355 [73]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36547 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36549 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36550 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36551 \item[\code{object}] an object for which a summary is desired. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36552 \item[\code{x}] a result of the \emph{default} method of \code{summa... ! Undefined control sequence. l.36552 ...t of the \emph{default} method of \code {summary()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36553 \item[\code{maxsum}] integer, indicating how many levels should be s... ! Undefined control sequence. l.36554 \code {\LinkA{factor}{factor}}s. ! Undefined control sequence. l.36554 \code{\LinkA {factor}{factor}}s. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36555 \item[\code{digits}] integer, used for number formatting with ! Undefined control sequence. l.36556 \code {\LinkA{signif}{signif}()} (for \code{summary.default}) or ! Undefined control sequence. l.36556 \code{\LinkA {signif}{signif}()} (for \code{summary.default}) or ! Undefined control sequence. l.36556 \code{\LinkA{signif}{signif}()} (for \code {summary.default}) or ! Undefined control sequence. l.36557 \code {\LinkA{format}{format}()} (for \code{summary.data.frame}). In ! Undefined control sequence. l.36557 \code{\LinkA {format}{format}()} (for \code{summary.data.frame}). In ! Undefined control sequence. l.36557 \code{\LinkA{format}{format}()} (for \code {summary.data.frame}). In ! Undefined control sequence. l.36558 \code {summary.default}, if not specified (i.e., ! Undefined control sequence. l.36559 \code {\LinkA{missing}{missing}(.)}), \code{signif()} will \emph{not}... ! Undefined control sequence. l.36559 \code{\LinkA {missing}{missing}(.)}), \code{signif()} will \emph{not}... ! Undefined control sequence. l.36559 \code{\LinkA{missing}{missing}(.)}), \code {signif()} will \emph{not}... ! Undefined control sequence. l.36560 anymore (since \R {} >= 3 [102.4.0, where the default has been changed to ! Undefined control sequence. l.36561 only round in the \code {print} and \code{format} methods). ! Undefined control sequence. l.36561 only round in the \code{print} and \code {format} methods). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36562 \item[\code{...}] additional arguments affecting the summary produced. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36563 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36564 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36566 \begin{Details} \relax ! Undefined control sequence. l.36567 For \code {\LinkA{factor}{factor}}s, the frequency of the first \code... ! Undefined control sequence. l.36567 For \code{\LinkA {factor}{factor}}s, the frequency of the first \code... ! Undefined control sequence. l.36567 ...or}}s, the frequency of the first \code {maxsum - 1} ! Undefined control sequence. l.36569 summarized in \code {"(Others)"} (resulting in at most \code{maxsum} ! Undefined control sequence. l.36569 ..."(Others)"} (resulting in at most \code {maxsum} ! Undefined control sequence. l.36572 The functions \code {summary.lm} and \code{summary.glm} are examples ! Undefined control sequence. l.36572 The functions \code{summary.lm} and \code {summary.glm} are examples ! Undefined control sequence. l.36574 \code {\LinkA{lm}{lm}} and \code{\LinkA{glm}{glm}}. ! Undefined control sequence. l.36574 \code{\LinkA {lm}{lm}} and \code{\LinkA{glm}{glm}}. ! Undefined control sequence. l.36574 \code{\LinkA{lm}{lm}} and \code {\LinkA{glm}{glm}}. ! Undefined control sequence. l.36574 \code{\LinkA{lm}{lm}} and \code{\LinkA {glm}{glm}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36575 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36577 \begin{Value} ! Undefined control sequence. l.36578 The form of the value returned by \code {summary} depends on the ! Undefined control sequence. l.36583 \code {c("summaryDefault", "\LinkA{table}{table}")} which has special... ! Undefined control sequence. l.36583 \code{c("summaryDefault", "\LinkA {table}{table}")} which has special... ! Undefined control sequence. l.36584 \code {\LinkA{format}{format}} and \code{\LinkA{print}{print}} method... ! Undefined control sequence. l.36584 \code{\LinkA {format}{format}} and \code{\LinkA{print}{print}} method... ! Undefined control sequence. l.36584 \code{\LinkA{format}{format}} and \code {\LinkA{print}{print}} method... ! Undefined control sequence. l.36584 ...LinkA{format}{format}} and \code{\LinkA {print}{print}} methods. The ! Undefined control sequence. l.36585 \code {\LinkA{factor}{factor}} method returns an integer vector. ! Undefined control sequence. l.36585 \code{\LinkA {factor}{factor}} method returns an integer vector. Underfull \hbox (badness 1389) in paragraph at lines 36582--36586 []\OT1/cmr/m/n/10 The de-fault method re-turns an ob-ject of class c("summaryDe fault", ! Undefined control sequence. l.36588 \code {"\LinkA{table}{table}"}, obtained by applying \code{summary} t... ! Undefined control sequence. l.36588 \code{"\LinkA {table}{table}"}, obtained by applying \code{summary} t... ! Undefined control sequence. l.36588 ...e}{table}"}, obtained by applying \code {summary} to each ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36590 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36592 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36596 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36598 \begin{SeeAlso} \relax ! Undefined control sequence. l.36599 \code {\LinkA{anova}{anova}}, ! Undefined control sequence. l.36599 \code{\LinkA {anova}{anova}}, ! Undefined control sequence. l.36600 \code {\LinkA{summary.glm}{summary.glm}}, ! Undefined control sequence. l.36600 \code{\LinkA {summary.glm}{summary.glm}}, ! Undefined control sequence. l.36601 \code {\LinkA{summary.lm}{summary.lm}}. ! Undefined control sequence. l.36601 \code{\LinkA {summary.lm}{summary.lm}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36602 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36604 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36605 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36606 summary(a]ttenu, digits = 4) # -> summary.data.frame(...), default pre... ! You can't use `macro parameter character #' in math mode. l.36607 summary(attenu $ station, maxsum = 20) # -> summary.factor(...) ! Missing $ inserted. $ l.36608 Underfull \hbox (badness 2213) in paragraph at lines 36587--36608 \OT1/cmr/m/n/10 ob-tained by ap-ply-ing sum-mary to each col-umn and col-lat-in g the re- ! You can't use `macro parameter character #' in math mode. l.36609 lst <- unclass(attenu$station) > 20 # logical with NAs ! You can't use `macro parameter character #' in math mode. l.36610 # # summary.default() for logicals -- different from *.factor: ! You can't use `macro parameter character #' in math mode. l.36610 ## summary.default() for logicals -- different from *.factor: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36613 \end{ExampleCode} ! Missing $ inserted. $ l.36613 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36614 \end{Examples} ! Undefined control sequence. l.36615 \HeaderA {svd}{Singular Value Decomposition of a Matrix}{svd} ! Undefined control sequence. l.36616 \aliasA {La.svd}{svd}{La.svd} ! Undefined control sequence. l.36617 \keyword {algebra}{svd} ! Undefined control sequence. l.36618 \keyword {array}{svd} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36620 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36622 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36624 \begin{Usage} Overfull \hbox (28.96983pt too wide) in paragraph at lines 36609--36625 []\OT1/cmr/m/n/10 lst <- unclass(attenu$\OML/cmm/m/it/10 station\OT1/cmr/m/n/10 ) \OML/cmm/m/it/10 > \OT1/cmr/m/n/10 20\OML/cmm/m/it/10 logicalwithNAssummary: default\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 forlogicals \OMS/cmsy/m/n/10 ^^@ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36630 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36632 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [103 [74 l.36633 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36634 \item[\code{x}] a numeric or complex matrix whose SVD decomposition ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36636 \item[\code{nu}] the number of left singular vectors to be computed. ! Undefined control sequence. l.36637 This must between \code {0} and \code{n = nrow(x)}. ! Undefined control sequence. l.36637 This must between \code{0} and \code {n = nrow(x)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36638 \item[\code{nv}] the number of right singular vectors to be computed. ! Undefined control sequence. l.36639 This must be between \code {0} and \code{p = ncol(x)}. ! Undefined control sequence. l.36639 This must be between \code{0} and \code {p = ncol(x)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36640 \item[\code{LINPACK}] logical. Defunct and ignored. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36641 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36642 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36644 \begin{Details} \relax ! Undefined control sequence. l.36646 statistical techniques. \code {svd} and \code{La.svd} provide two ! Undefined control sequence. l.36646 ...tical techniques. \code{svd} and \code {La.svd} provide two ! Undefined control sequence. l.36650 ...on will be more efficient if both \code {nu <= min(n, p)} ! Undefined control sequence. l.36651 and \code {nv <= min(n, p)}, and even more so if both are zero. ! Undefined control sequence. l.36654 ...a positive error code (most often \code {1}): these can ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36657 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate] help. ... l.36659 \begin{Value} ! Undefined control sequence. l.36660 ...the matrix as computed by LAPACK, \deqn { ! Undefined control sequence. l.36661 \bold {X = U D V'},}{} where \eqn{\bold{U}}{} and \eqn{\bold{V}}{} are ! Undefined control sequence. l.36661 \bold{X = U D V'},}{} where \eqn {\bold{U}}{} and \eqn{\bold{V}}{} are ! Undefined control sequence. l.36661 \bold{X = U D V'},}{} where \eqn{\bold {U}}{} and \eqn{\bold{V}}{} are ! Undefined control sequence. l.36661 ...V'},}{} where \eqn{\bold{U}}{} and \eqn {\bold{V}}{} are ! Undefined control sequence. l.36661 ...} where \eqn{\bold{U}}{} and \eqn{\bold {V}}{} are ! Undefined control sequence. l.36662 orthogonal, \eqn {\bold{V'}}{} means \emph{V transposed} (and conjugated ! Undefined control sequence. l.36662 orthogonal, \eqn{\bold {V'}}{} means \emph{V transposed} (and conjugated ! Undefined control sequence. l.36663 for complex input), and \eqn {\bold{D}}{} is a diagonal matrix with the ! Undefined control sequence. l.36663 for complex input), and \eqn{\bold {D}}{} is a diagonal matrix with the ! Undefined control sequence. l.36664 singular values \eqn {D_{ii}}{}. Equivalently, \eqn{\bold{D = U' ! Missing $ inserted. $ l.36664 singular values \eqn{D_ {ii}}{}. Equivalently, \eqn{\bold{D = U' ! Extra }, or forgotten $. l.36664 singular values \eqn{D_{ii}} {}. Equivalently, \eqn{\bold{D = U' ! Undefined control sequence. l.36664 ...ues \eqn{D_{ii}}{}. Equivalently, \eqn {\bold{D = U' ! Undefined control sequence. l.36664 ...qn{D_{ii}}{}. Equivalently, \eqn{\bold {D = U' ! Missing $ inserted. $ l.36666 [356 Chapter 5] [104]] ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36668 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36669 \item[\code{d}] a vector containing the singular values of \code{x}, of ! Undefined control sequence. l.36669 ...containing the singular values of \code {x}, of ! Undefined control sequence. l.36670 length \code {min(n, p)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36671 \item[\code{u}] a matrix whose columns contain the left singular vec... ! Undefined control sequence. l.36672 \code {x}, present if \code{nu > 0}. Dimension \code{c(n, nu)}. ! Undefined control sequence. l.36672 \code{x}, present if \code {nu > 0}. Dimension \code{c(n, nu)}. ! Undefined control sequence. l.36672 ...sent if \code{nu > 0}. Dimension \code {c(n, nu)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36673 \item[\code{v}] a matrix whose columns contain the right singular ve... ! Undefined control sequence. l.36674 \code {x}, present if \code{nv > 0}. Dimension \code{c(p, nv)}. ! Undefined control sequence. l.36674 \code{x}, present if \code {nv > 0}. Dimension \code{c(p, nv)}. ! Undefined control sequence. l.36674 ...sent if \code{nv > 0}. Dimension \code {c(p, nv)}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36676 \end{ldescription} ! Undefined control sequence. l.36682 For \code {La.svd} the return value replaces \code{v} by \code{vt}, the ! Undefined control sequence. l.36682 ...La.svd} the return value replaces \code {v} by \code{vt}, the ! Undefined control sequence. l.36682 ...return value replaces \code{v} by \code {vt}, the ! Undefined control sequence. l.36683 (conjugated if complex) transpose of \code {v}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36684 \end{Value} ! Missing } inserted. } l.36684 \end{Value} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36686 \begin{Source} \relax ! Undefined control sequence. l.36687 ...ions used are the LAPACK routines \code {DGESDD} and ! Undefined control sequence. l.36688 \code {ZGESDD}. ! Undefined control sequence. l.36690 LAPACK is from \url {http://www.netlib.org/lapack} and its guide is ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36692 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36694 \begin{References} \relax ! Undefined control sequence. l.36698 \url {http://www.netlib.org/lapack/lug/lapack_lug.html}. ! Missing $ inserted. $ l.36698 ...ttp://www.netlib.org/lapack/lug/lapack_ lug.html}. ! Extra }, or forgotten $. l.36698 ....netlib.org/lapack/lug/lapack_lug.html} . ! Missing $ inserted. $ l.36699 ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36703 \end{References} ! Missing } inserted. } l.36703 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36705 \begin{SeeAlso} \relax ! Undefined control sequence. l.36706 \code {\LinkA{eigen}{eigen}}, \code{\LinkA{qr}{qr}}. ! Undefined control sequence. l.36706 \code{\LinkA {eigen}{eigen}}, \code{\LinkA{qr}{qr}}. ! Undefined control sequence. l.36706 \code{\LinkA{eigen}{eigen}}, \code {\LinkA{qr}{qr}}. ! Undefined control sequence. l.36706 \code{\LinkA{eigen}{eigen}}, \code{\LinkA {qr}{qr}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36707 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36709 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36710 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36717 \end{ExampleCode} ! Missing $ inserted. $ l.36717 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [75 l.36718 \end{Examples} ! Undefined control sequence. l.36719 \HeaderA {sweep}{Sweep out Array Summaries}{sweep} ! Undefined control sequence. l.36720 \keyword {array}{sweep} ! Undefined control sequence. l.36721 \keyword {iteration}{sweep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36723 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36726 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36728 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36732 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36734 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36735 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36736 \item[\code{x}] an array. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36737 \item[\code{MARGIN}] a vector of indices giving the extent(s) of \co... ! Undefined control sequence. l.36737 ...f indices giving the extent(s) of \code {x} ! Undefined control sequence. l.36738 which correspond to \code {STATS}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36739 \item[\code{STATS}] the summary statistic which is to be swept out. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36740 \item[\code{FUN}] the function to be used to carry out the sweep. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36741 \item[\code{check.margin}] ] logical. If \code{TRUE} (the default), w... ! Undefined control sequence. l.36741 ...\code{check.margin}] logical. If \code {TRUE} (the default), warn... ! Undefined control sequence. l.36742 length or dimensions of \code {STATS} do not match the specified ! Undefined control sequence. l.36743 dimensions of \code {x}. Set to \code{FALSE} for a small speed gain ! Undefined control sequence. l.36743 dimensions of \code{x}. Set to \code {FALSE} for a small speed gain ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36745 \item[\code{...}] optional arguments to \code{FUN}. ! Undefined control sequence. l.36745 ...\code{...}] optional arguments to \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36746 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36747 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36749 \begin{Details} \relax ! Undefined control sequence. l.36750 \code {FUN} is found by a call to \code{\LinkA{match.fun}{match.fun}}... ! Undefined control sequence. l.36750 \code{FUN} is found by a call to \code {\LinkA{match.fun}{match.fun}}... ! Undefined control sequence. l.36750 ...FUN} is found by a call to \code{\LinkA {match.fun}{match.fun}}. ... ! Undefined control sequence. l.36753 \code {FUN} should be a function of two arguments: it will be called ! Undefined control sequence. l.36754 with arguments \code {x} and an array of the same dimensions generated ! Undefined control sequence. l.36755 from \code {STATS} by \code{\LinkA{aperm}{aperm}}. ! Undefined control sequence. l.36755 from \code{STATS} by \code {\LinkA{aperm}{aperm}}. ! Undefined control sequence. l.36755 from \code{STATS} by \code{\LinkA {aperm}{aperm}}. ! Undefined control sequence. l.36757 The consistency check among \code {STATS}, \code{MARGIN} and \code{x} ! Undefined control sequence. l.36757 ...istency check among \code{STATS}, \code {MARGIN} and \code{x} ! Undefined control sequence. l.36757 ...g \code{STATS}, \code{MARGIN} and \code {x} ! Undefined control sequence. l.36758 is stricter if \code {STATS} is an array than if it is a vector. ! Undefined control sequence. l.36760 warning. Use \code {sweep(x, MARGIN, as.array(STATS))} if \code{STATS} ! Undefined control sequence. l.36760 ...p(x, MARGIN, as.array(STATS))} if \code {STATS} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36762 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36764 \begin{Value} ! Undefined control sequence. l.36765 An array with the same shape as \code {x}, but with the summary ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36767 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36769 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36773 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36775 \begin{SeeAlso} \relax ! Undefined control sequence. l.36776 \code {\LinkA{apply}{apply}} on which \code{sweep} used to be based; ! Undefined control sequence. l.36776 \code{\LinkA {apply}{apply}} on which \code{sweep} used to be based; ! Undefined control sequence. l.36776 \code{\LinkA{apply}{apply}} on which \code {sweep} used to be based; ! Undefined control sequence. l.36777 \code {\LinkA{scale}{scale}} for centering and scaling. ! Undefined control sequence. l.36777 \code{\LinkA {scale}{scale}} for centering and scaling. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36778 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36780 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36781 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36782 require(stats) # for median ! You can't use `macro parameter character #' in horizontal mode. l.36784 ...p(data.matrix(attitude), 2, med.att) # subtract the column medians [357 Underfull \hbox (badness 10000) in paragraph at lines 6412--6415 @textrm and these can be ac-cessed from R via the pack-age [][]@textbf rggobi[] []@textrm , de-scribed at Chapter 13 [105 [76]]] ! You can't use `macro parameter character #' in vertical mode. l.36786 # # More sweeping: ! You can't use `macro parameter character #' in vertical mode. l.36786 ## More sweeping: ! You can't use `macro parameter character #' in vertical mode. l.36789 # # no warnings in normal use ! You can't use `macro parameter character #' in vertical mode. l.36789 ## no warnings in normal use ! You can't use `macro parameter character #' in horizontal mode. l.36791 (A.min <- apply(A, 1, min)) # == 1:4 ! You can't use `macro parameter character #' in vertical mode. l.36795 # # warnings when mismatch ! You can't use `macro parameter character #' in vertical mode. l.36795 ## warnings when mismatch ! You can't use `macro parameter character #' in horizontal mode. l.36796 sweep(A, 1, 1:3) # STATS does not recycle ! You can't use `macro parameter character #' in horizontal mode. l.36797 sweep(A, 1, 6:1) # STATS is longer ! You can't use `macro parameter character #' in vertical mode. l.36799 # # exact recycling: ! You can't use `macro parameter character #' in vertical mode. l.36799 ## exact recycling: ! You can't use `macro parameter character #' in horizontal mode. l.36800 sweep(A, 1, 1:2) # no warning ! You can't use `macro parameter character #' in horizontal mode. l.36801 sweep(A, 1, as.array(1:2)) # warning ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36802 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36803 \end{Examples} ! Undefined control sequence. l.36804 \HeaderA {switch}{Select One of a List of Alternatives}{switch} ! Undefined control sequence. l.36805 \keyword {programming}{switch} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36807 \begin{Description} \relax ! Undefined control sequence. l.36808 \code {switch} evaluates \code{EXPR} and accordingly chooses one of the ! Undefined control sequence. l.36808 \code{switch} evaluates \code {EXPR} and accordingly chooses one of the ! Undefined control sequence. l.36809 further arguments (in \code {...}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36810 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36812 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36816 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36818 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36819 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36820 \item[\code{EXPR}] an expression evaluating to a number or a character ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36822 \item[\code{...}] the list of alternatives. If it is intended that ! Undefined control sequence. l.36823 \code {EXPR} has a character-string value these will be ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36826 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36827 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36829 \begin{Details} \relax ! Undefined control sequence. l.36830 \code {switch} works in two distinct ways depending whether the first ! Undefined control sequence. l.36833 If the value of \code {EXPR} is not a character string it is coerced to ! Undefined control sequence. l.36834 ... Note that this also happens for \code {\LinkA{factor}{factor}}s,... ! Undefined control sequence. l.36834 ...that this also happens for \code{\LinkA {factor}{factor}}s, with ! Undefined control sequence. l.36836 is between 1 and \code {nargs()-1} then the corresponding element of ! Undefined control sequence. l.36837 \code {...} is evaluated and the result returned: thus if the first ! Undefined control sequence. l.36838 argument is \code {3} then the fourth argument is evaluated and ! Undefined control sequence. l.36841 If \code {EXPR} evaluates to a character string then that string is ! Undefined control sequence. l.36842 ...) to the names of the elements in \code {...}. If ! Undefined control sequence. l.36845 example \code {switch("cc", a = 1, cc =, cd =, d = 2)} evaluates to ! Undefined control sequence. l.36846 \code {2}. If there is more than one match, the first matching element ! Undefined control sequence. l.36848 \code {...} its value is returned. (If there is more than one such ! Undefined control sequence. l.36851 ...st argument is always taken to be \code {EXPR}: if it is named ! Undefined control sequence. l.36857 This is implemented as a \LinkA {primi [106tive}{primitive} function that ... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36859 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36861 \begin{Value} ! Undefined control sequence. l.36862 The value of one of the elements of \code {...}, or \code{NULL}, ! Undefined control sequence. l.36862 ...of the elements of \code{...}, or \code {NULL}, ! Undefined control sequence. l.36865 The result has the visibility (see \code {\LinkA{invisible}{invisible... ! Undefined control sequence. l.36865 ...lt has the visibility (see \code{\LinkA {invisible}{invisible}}) o... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36867 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36869 \begin{Section} {Warning} ! Undefined control sequence. l.36870 It is possible to write calls to \code {switch} that can be confusing ! Undefined control sequence. l.36871 ... the same way in earlier versions of \R {}. For ! Undefined control sequence. l.36872 ...bility (and clarity), always have \code {EXPR} as the first ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36876 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36878 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36882 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36884 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36885 \begin{ExampleCode} [358] [77] ! You can't use `macro parameter character #' in horizontal mode. l.36899 # note: cat() produces no output for NULL ! Undefined control sequence. l.36901 ... switch(EXPR = ch, a = 1, b = 2:3), "\n ") ! Undefined control sequence. l.36903 ... A = 1, b = 2:3, "Otherwise: last"),"\n ") ! You can't use `macro parameter character #' in vertical mode. l.36905 # # switch(f, *) with a factor f ! You can't use `macro parameter character #' in vertical mode. l.36905 ## switch(f, *) with a factor f ! You can't use `macro parameter character #' in horizontal mode. l.36907 ff[1] # C ! You can't use `macro parameter character #' in horizontal mode. l.36908 # # so one might expect " is C" here, but ! You can't use `macro parameter character #' in horizontal mode. l.36908 ## so one might expect " is C" here, but ! You can't use `macro parameter character #' in horizontal mode. l.36909 ...1], A = "I am A", B="Bb..", C=" is C")# -> "I am A" ! You can't use `macro parameter character #' in horizontal mode. l.36910 # # so we give a warning ! You can't use `macro parameter character #' in horizontal mode. l.36910 ## so we give a warning ! You can't use `macro parameter character #' in vertical mode. l.36912 # # Numeric EXPR does not allow a default value to be specified ! You can't use `macro parameter character #' in vertical mode. l.36912 ## Numeric EXPR does not allow a default value to be specified ! You can't use `macro parameter character #' in horizontal mode. l.36913 # # -- it is always NULL ! You can't use `macro parameter character #' in horizontal mode. l.36913 ## -- it is always NULL ! You can't use `macro parameter character #' in vertical mode. l.36916 # # visibility ! You can't use `macro parameter character #' in vertical mode. l.36916 ## visibility ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36919 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36920 \end{Examples} ! Undefined control sequence. l.36921 \HeaderA {Syntax}{Operator Syntax and Precedence}{Syntax} ! Undefined control sequence. l.36922 \keyword {documentation}{Syntax} ! Undefined control sequence. l.36923 \keyword {programming}{Syntax} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36925 \begin{Description} \relax ! Undefined control sequence. l.36926 Outlines \R {} syntax and gives the precedence of operators. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36927 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36929 \begin{Details} \relax ! Undefined control sequence. l.36933 \Tabular {ll}{ ! Undefined contro]l sequence. l.36934 \code {:: :::}& access variables in a namespace\\{} ! Misplaced alignment tab character &. l.36934 \code{:: :::}& access variables in a namespace\\{} ! Undefined control sequence. l.36935 \code {\$ @}& component / slot extraction\\{} ! Misplaced alignment tab character &. l.36935 \code{\$ @}& component / slot extraction\\{} ! Undefined control sequence. l.36936 \code {[ [[}& indexing\\{} ! Misplaced alignment tab character &. l.36936 \code{[ [[}& indexing\\{} ! Undefined control sequence. l.36937 \code {\textasciicircum{}}& exponentiation (right to left)\\{} ! Misplaced alignment tab character &. l.36937 \code{\textasciicircum{}}& exponentiation (right to left)\\{} ! Undefined control sequence. l.36938 \code {- +}& unary minus and plus\\{} ! Misplaced alignment tab character &. l.36938 \code{- +}& unary minus and plus\\{} ! Undefined control sequence. l.36939 \code {:}& sequence operator\\{} ! Misplaced alignment tab character &. l.36939 \code{:}& sequence operator\\{} ! Undefined control sequence. l.36940 \code {\%any\%}& special operators (including \code{\%\%} and \code{\... ! Misplaced alignment tab character &. l.36940 \code{\%any\%}& special operators (including \code{\%\%} and \code{\... ! Undefined control sequence. l.36940 ...\%}& special operators (including \code {\%\%} and \code{\%/\%})\\{} ! Undefined control sequence. l.36940 ...rators (including \code{\%\%} and \code {\%/\%})\\{} ! Undefined control sequence. l.36941 \code {* /}& multiply, divide\\{} ! Misplaced alignment tab character &. l.36941 \code{* /}& multiply, divide\\{} ! Undefined control sequence. l.36942 \code {+ -}& (binary) add, subtract\\{} ! Misplaced alignment tab character &. l.36942 \code{+ -}& (binary) add, subtract\\{} ! Undefined control sequence. l.36943 \code {< > <= >= == !=}& ordering and comparison\\{} ! Misplaced alignment tab character &. l.36943 \code{< > <= >= == !=}& ordering and comparison\\{} ! Undefined control sequence. l.36944 \code {!}& negation\\{} ! Misplaced alignment tab character &. l.36944 \code{!}& negation\\{} ! Undefined control sequence. l.36945 \code {\& \&\&}& and\\{} ! Misplaced alignment tab character &. l.36945 \code{\& \&\&}& and\\{} ! Undefined control sequence. l.36946 \code {| ||}& or\\{} ! Misplaced alignment tab character &. l.36946 \code{| ||}& or\\{} ! Undefined control sequence. l.36947 \code {\textasciitilde{}}& as in formulae\\{} ! Misplaced alignment tab character &. l.36947 \code{\textasciitilde{}}& as in formulae\\{} ! Undefined control sequence. l.36948 \code {-> ->{}>}& rightwards assignment\\{} ! Misplaced alignment tab character &. l.36948 \code{-> ->{}>}& rightwards assignment\\{} ! Undefined control sequence. l.36949 \code {<- <{}<-}& assignment (right to left)\\{} ! Misplaced alignment tab character &. l.36949 \code{<- <{}<-}& assignment (right to left)\\{} ! Undefined control sequence. l.36950 \code {=}& assignment (right to left)\\{} ! Misplaced alignment tab character &. l.36950 \code{=}& assignment (right to left)\\{} ! Undefined control sequence. l.36951 \code {?}& help (unary and binary)\\{} ! Misplaced alignment tab character &. l.36951 \code{?}& help (unary and binary)\\{} ! Undefined control sequence. l.36954 ...cept where indicated. (Note that \code {=} is not ! Chapter 14 [78 [107Undefined control sequence. l.36957 The binary operators \code {::}, \code{:::}, \code{\$} and \code{@} r... ! Undefined control sequence. l.36957 The binary operators \code{::}, \code {:::}, \code{\$} and \code{@} r... ! Undefined control sequence. l.36957 ... operators \code{::}, \code{:::}, \code {\$} and \code{@} require ! Undefined control sequence. l.36957 ...de{::}, \code{:::}, \code{\$} and \code {@} require ! Undefined control sequence. l.36961 The links in the \bold {See Also} section cover most other aspects of ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36963 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36965 \begin{Note} \relax ! Undefined control sequence. l.36966 ...ntial precedence differences between \R {} and S. In ! Undefined control sequence. l.36967 particular, in S \code {?} has the same precedence as (binary) \code{... ! Undefined control sequence. l.36967 ...s the same precedence as (binary) \code {+ -} ! Undefined control sequence. l.36968 and \code {\& \&\& | ||} have equal precedence. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36969 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36971 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36975 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36977 \begin{SeeAlso} \relax ! Undefined control sequence. l.36978 \code {\LinkA{Arithmetic}{Arithmetic}}, \code{\LinkA{Comparison}{Comp... ! Undefined control sequence. l.36978 \code{\LinkA {Arithmetic}{Arithmetic}}, \code{\LinkA{Comparison}{Comp... ! Undefined control sequence. l.36978 ...{\LinkA{Arithmetic}{Arithmetic}}, \code {\LinkA{Comparison}{Compar... ! Undefined control sequence. l.36978 ...{Arithmetic}{Arithmetic}}, \code{\LinkA {Comparison}{Comparison}},... ! Undefined control sequence. l.36978 ...{\LinkA{Comparison}{Comparison}}, \code {\LinkA{Control}{Control}}, ! Undefined control sequence. l.36978 ...{Comparison}{Comparison}}, \code{\LinkA {Control}{Control}}, ! Undefined control sequence. l.36979 \code {\LinkA{Extract}{Extract}}, \code{\LinkA{Logic}{Logic}}, ! Undefined control sequence. ]l.36979 \code{\LinkA {Extract}{Extract}}, \code{\LinkA{Logic}{Logic}}, ! Undefined control sequence. l.36979 \code{\LinkA{Extract}{Extract}}, \code {\LinkA{Logic}{Logic}}, ! Undefined control sequence. l.36979 ...\LinkA{Extract}{Extract}}, \code{\LinkA {Logic}{Logic}}, ! Undefined control sequence. l.36980 \code {\LinkA{NumericConstants}{NumericConstants}}, \code{\LinkA{Pare... ! Undefined control sequence. l.36980 \code{\LinkA {NumericConstants}{NumericConstants}}, \code{\LinkA{Pare... ! Undefined control sequence. l.36980 ...ricConstants}{NumericConstants}}, \code {\LinkA{Paren}{Paren}}, ! Undefined control sequence. l.36980 ...tants}{NumericConstants}}, \code{\LinkA {Paren}{Paren}}, ! Undefined control sequence. l.36981 \code {\LinkA{Quotes}{Quotes}}, \code{\LinkA{Reserved}{Reserved}}. ! Undefined control sequence. l.36981 \code{\LinkA {Quotes}{Quotes}}, \code{\LinkA{Reserved}{Reserved}}. ! Undefined control sequence. l.36981 \code{\LinkA{Quotes}{Quotes}}, \code {\LinkA{Reserved}{Reserved}}. ! Undefined control sequence. l.36981 ...e{\LinkA{Quotes}{Quotes}}, \code{\LinkA {Reserved}{Reserved}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36984 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36986 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36987 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.36988 # # Logical AND ("&&") has higher precedence than OR ("||"): ! You can't use `macro parameter character #' in horizontal mode. l.36988 ## Logical AND ("&&") has higher precedence than OR ("||"): ! Misplaced alignment tab character &. l.36988 ## Logical AND ("& &") has higher precedence than OR ("||"): ! Misplaced alignment tab character &. l.36988 ## Logical AND ("&& ") has higher precedence than OR ("||"): ! Misplaced alignment tab character &. l.36989 TRUE || TRUE & & FALSE # is the same as ! Misplaced alignment tab character &. l.36989 TRUE || TRUE && FALSE # is the same as ! You can't use `macro parameter character #' in horizontal mode. l.36989 TRUE || TRUE && FALSE # is the same as ! Misplaced alignment tab character &. l.36990 TRUE || (TRUE & & FALSE) # and different from ! Misplaced alignment tab character &. l.36990 TRUE || (TRUE && FALSE) # and different from ! You can't use `macro parameter character #' in horizontal mode. l.36990 TRUE || (TRUE && FALSE) # and different from ! Misplaced alignment tab character &. l.36991 (TRUE || TRUE) & & FALSE ! Misplaced alignment tab character &. l.36991 (TRUE || TRUE) && FALSE [359]] [79 ! You can't use `macro parameter character #' in vertical mode. l.36993 # # Special operators have higher precedence than "!" (logical NOT). ! You can't use `macro parameter character #' in vertical mode. l.36993 ## Special operators have higher precedence than "!" (logical NOT). ! You can't use `macro parameter character #' in horizontal mode. l.36994 # # You can use this for %in% : ! You can't use `macro parameter character #' in horizontal mode. l.36994 ## You can use this for %in% : ! You can't use `macro parameter character #' in horizontal mode. l.36996 # # but we strongly advise to use the "!( ... )" form in this case! ! You can't use `macro parameter character #' in horizontal mode. l.36996 ## but we strongly advise to use the "!( ... )" form in this case! ! You can't use `macro parameter character #' in vertical mode. l.36999 # # '=' has lower precedence than '<-' ... so you should not mix them ! You can't use `macro parameter character #' in vertical mode. l.36999 ## '=' has lower precedence than '<-' ... so you should not mix them ! You can't use `macro parameter character #' in horizontal mode. l.37000 # # (and '<-' is considered better style anyway): ! You can't use `macro parameter character #' in horizontal mode. l.37000 ## (and '<-' is considered better style anyway): ! You can't use `macro parameter character #' in horizontal mode. l.37001 # # Consequently, this gives a ("non-catchable") error ! You can't use `macro parameter character #' in horizontal mode. l.37001 ## Consequently, this gives a ("non-catchable") error ! You can't use `macro parameter character #' in horizontal mode. l.37002 x <- y = 5 # -> Error in (x <- y) = 5 : .... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37004 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37005 \end{Examples} ! Undefined control sequence. l.37006 \HeaderA {Sys.getenv}{Get Environment Variables}{Sys.getenv} ! Undefined control sequence. l.37007 \keyword {environment}{Sys.getenv} ! Undefined control sequence. l.37008 \keyword {utilities}{Sys.getenv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37010 \begin{Description} \relax ! Undefined control sequence. l.37011 \code {Sys.getenv} obtains the values of the environment variables. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37012 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37014 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37018 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37020 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37021 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37022 \item[\code{x}] a character vector, or \code{NULL}. ! Undefined control sequence. l.37022 ...[\code{x}] a character vector, or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37023 \item[\code{unset}] a character string. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37024 \item[\code{names}] logical: should the result be named? If \code{N... ! Undefined control sequence. l.37024 ...: should the result be named? If \code {NA} (the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37027 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37028 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37030 \begin{Details} \relax ! Undefined control sequence. l.37033 Setting \code {unset = NA} will enable unset variables and those set to ! Undefined control sequence. l.37034 the value \code {""} to be distinguished, \emph{if the OS does}. POSIX ! Undefined control sequence. l.37035 ...o distinguish, and all known current \R {} platforms do. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37036 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37038 \begin{Value} ! Undefined control sequence. l.37039 A vector of the same length as \code {x}, with (if \code{names == ! Undefined control sequence. l.37039 ...same length as \code{x}, with (if \code [108] {names == ! Undefined control sequence. l.37040 TRUE}) the variable names as its \code {names} attribute. Each ele... ! Undefined control sequence. l.37042 component of \code {x} (or the value of \code{unset} if no environment ! Undefined control sequence. l.37042 ...nent of \code{x} (or the value of \code {unset} if no environment ! Undefined control sequence. l.37045 On most platforms \code {Sys.getenv()} will return a named vector ! Undefined control sequence. l.37047 ...y be confused by names containing \code {=} which ! Undefined control sequence. l.37049 there names including \code {=} are truncated just before the first ! Undefined control sequence. l.37050 \code {=}.) ! Undefined control sequence. l.37052 When \code {x} is missing and \code{names} is not false, the result is ! Undefined control sequence. l.37052 When \code{x} is missing and \code {names} is not false, the result is ! Undefined control sequence. l.37053 of class \code {"Dlist"} in order to get a nice ! Undefined control sequence. l.37054 \code {\LinkA{print}{print}} method. ! Undefined control sequence. l.37054 \code{\LinkA {print}{print}} method. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37055 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37057 \begin{SeeAlso} \relax ! Undefined control sequence. l.37058 \code {\LinkA{Sys.setenv}{Sys.setenv}}, ! Undefined control sequence. l.37058 \code{\LinkA {Sys.setenv}{Sys.setenv}}, ! Undefined control sequence. l.37059 \code {\LinkA{Sys.getlocale}{Sys.getlocale}} for the locale in use, ! Undefined control sequence. l.37059 \code{\LinkA {Sys.getlocale}{Sys.getlocale}} for the locale in use, ! Undefined control sequence. l.37060 \code {\LinkA{getwd}{getwd}} for the working directory. ! Undefined control sequence. l.37060 \code{\LinkA {getwd}{getwd}} for the working directory. Underfull \hbox (badness 1681) in paragraph at lines 37052--37061 []\OT1/cmr/m/n/10 When x is miss-ing and names is not false, the re-sult is of class ! Undefined control sequence. l.37062 The help for `\LinkA {environment variables}{environment variables}' ... ! Undefined control sequence. l.37063 environment variables used by \R {}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37064 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37066 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37067 \begin{ExampleCode} ! You can't use `ma]cro parameter character #' in horizontal mode. l.37068 # # whether HOST is set will be shell-dependent e.g. Solaris' csh doe... ! You can't use `macro parameter character #' in horizontal mode. l.37068 ## whether HOST is set will be shell-dependent e.g. Solaris' csh doe... ! Missing $ inserted. $ l.37069 Sys.getenv(c("R_ HOME", "R_PAPERSIZE", "R_PRINTCMD", "HOST")) ! Missing $ inserted. $ l.37070 Underfull \hbox (badness 1337) in paragraph at lines 37062--37070 []\OT1/cmr/m/n/10 The help for `en-vi-ron-ment vari-able-sen-vi-ron-ment vari-a bles' lists many Underfull \hbox (badness 4084) in paragraph at lines 37062--37070 \OT1/cmr/m/n/10 of the en-vi-ron-ment vari-ables used by . whether Underfull \hbox (badness 4792) in paragraph at lines 37062--37070 \OT1/cmr/m/n/10 HOST is set will be shell-dependent e.g. So-laris' csh does not . ! You can't use `macro parameter character #' in horizontal mode. l.37071 names(s <- Sys.getenv()) # all settings (the values could be very long) ! You can't use `macro parameter character #' in horizontal mode. l.37072 head(s, 12)# using the Dlist print() method ! You can't use `macro parameter character #' in vertical mode. l.37074 # # Language and Locale settings -- but rather use Sys.getlocale() ! You can't use `macro parameter character #' in vertical mode. l.37074 ## Language and Locale settings -- but rather use Sys.getlocale() ! Missing $ inserted. $ l.37075 s[grep("^ L(C|ANG)", names(s))] ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37076 \end{ExampleCode} ! Missing $ inserted. $ l.37076 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37077 \end{Examples} ! Undefined control sequence. l.37078 \HeaderA {Sys.getpid}{Get the Process ID of the R Session}{Sys.getpid} ! Undefined control sequence. l.37079 \keyword {utilities}{Sys.getpid} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37081 \begin{Description} \relax ! Undefined control sequence. l.37082 Get the process ID of the \R {} Session. It is guaranteed by the ! Undefined control sequence. l.37083 operating system that two \R {} sessions running simultaneously will ! Undefined control sequence. l.37084 ...fferent IDs, but it is possible that \R {} sessions running at ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37086 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37088 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 37074--37089 []\OT1/cmr/m/n/10 Language and Lo-cale set-tings -- but rather use Sys.getlocal e() ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37092 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37094 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37098 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37100 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37101 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.37105 # # Show files opened from this R process ! You can't use `macro parameter character #' in vertical mode. l.37105 ## Show files opened from this R process ! You can't use `macro parameter character #' in math mode. l.37106 if(.Platform$OS.type == "unix") # # on Unix-alikes such Linux, macOS,... ! You can't use `macro parameter character #' in math mode. l.37106 if(.Platform$OS.type == "unix") ## on Unix-alikes such Linux, macOS,... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37108 \end{ExampleCode} ! Missing $ inserted. $ l.37108 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37109 \end{Examples} ! Undefined control sequence. l.37110 \HeaderA {Sys.glob}{Wildcard Expansion on File Paths}{Sys.glob} ! Undefined control sequence. l.37111 \keyword {utilities}{Sys.glob} ! Undefined control sequence. l.37112 \keyword {file}{Sys.glob} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37114 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37117 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37119 \begin{Usage} Underfull \hbox (badness 5726) in paragraph at lines 37105--37120 []\OT1/cmr/m/n/10 Show files opened from this R pro-cess if(.Platform$\OML/cmm/ m/it/10 OS:type \OT1/cmr/m/n/10 == [360 Underfull \hbox (badness 10000) in paragraph at lines 6647--6652 []@textrm Windows' UNC filepaths (such as `@texttt \\server\dir1\dir2\file[]@t extrm '[] and Underfull \hbox (badness 5189) in paragraph at lines 6647--6652 @textrm `@texttt \\?\UNC\server\dir1\dir2\file[]@textrm '[]) are not sup-porte d, but they may work in [80 [109]] Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 []@textrm There is some con-fu-sion be-tween @texttt xz[] @textrm and @texttt l zma[] @textrm com-pres-sion (see Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 [][]@texttt https://en.wikipedia.org/wiki/Xz[][][] @textrm and [][]@texttt http s://en.wikipedia.org/wiki/LZMA[][][]@textrm ): Appendix A ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37123 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37125 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37126 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37127 \item[\code{paths}] character vector of patterns for relative or abs... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37129 \item[\code{dirmark}] logical: should matches to directories from pa... ! Undefined control sequence. l.37130 that do not already end in \code {/} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37132 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37133 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37135 \begin{Details} \relax ! Undefined control sequence. l.37137 system's documentation on the \code {glob} system call. There is a ! Undefined control sequence. l.37139 \url {http://pubs.opengroup.org/onlinepubs/9699919799/functions/glob.... ! Undefined control sequence. l.37140 but some OSes will go beyond this. The \R {} implementation will always ! Undefined control sequence. l.37141 do \LinkA {tilde expansion}{tilde expansion}. Underfull \hbox (badness 4279) in paragraph at lines 37129--37142 \OT1/cmr/m/n/10 (see http://pubs.opengroup.org/onlinepubs/9699919799/functions/ glob.html) ! Undefined control sequence. l.37143 All systems should interpret \code {*} (match zero or more characters), ! Undefined control sequence. l.37144 \code {?} (match a single character) and (probably) \code{[} (begin a ! Undefined control sequence. l.37144 ... single character) and (probably) \code {[} (begin a ! Undefined control sequence. l.37155 If a filename starts with \code {.} this may need to be matched ! Undefined control sequence. l.37156 explicitly: for example \code {Sys.glob("*.RData")} may or may not ! Undefined control [81]]sequence. l.37157 match \file {.RData} but will not usually match \file{.aa.RData}. Note ! Undefined control sequence. l.37157 ...RData} but will not usually match \file {.aa.RData}. Note ! Undefined control sequence. l.37159 \code {Sys.glob("*.*")} matches \file{.} and \file{..}. ! Undefined control sequence. l.37159 \code{Sys.glob("*.*")} matches \file {.} and \file{..}. ! Undefined control sequence. l.37159 ...glob("*.*")} matches \file{.} and \file {..}. ! Undefined control sequence. l.37161 \code {[} begins a character class. If the first character in ! Undefined control sequence. l.37162 \code {[...]} is not \code{!}, this is a character class which matches ! Undefined control sequence. l.37162 \code{[...]} is not \code {!}, this is a character class which matches ! Undefined control sequence. l.37164 cannot be empty, so \code {]} can be included provided it is first. If ! Undefined control sequence. l.37165 the first character is \code {!}, the character class matches a single ! Undefined control sequence. l.37167 \code {.} in a character class matches a leading \code{.} in the ! Undefined control sequence. l.37167 ...character class matches a leading \code {.} in the ! Undefined control sequence. l.37170 ...lasses can include ranges such as \code {[A-Z]}: include ! Undefined control sequence. l.37171 \code {-} as a character by having it first or last in a class. (The ! Undefined control sequence. l.37175 ...can remove the special meaning of \code {?}, \code{*} and ! Undefined control sequence. l.37175 ... the special meaning of \code{?}, \code {*} and ! Undefined control sequence. l.37176 \code {[} by preceding them by a backslash (except within a ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37178 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37180 \begin{Value} ! Undefined control sequence. l.37182 ...t in the order of the elements of \code {paths}): it ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37189 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37191 \begin{SeeAlso} \relax ! Undefined control sequence. l.37192 \code {\LinkA{path.expand}{path.expand}}. ! Undefined control sequence. l.37192 \code{\LinkA {path.expand}{path.expand}}. ! Undefined control sequence. l.37194 \LinkA {Quotes}{Quotes} for handling backslashes in character strings. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37195 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37197 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37198 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37201 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37202 \end{Examples} ! Undefined control sequence. l.37203 \HeaderA {Sys.info}{Extract System and User Information}{Sys.info} ! Undefined control sequence. l.37204 \keyword {utilities}{Sys.info} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37206 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37208 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37210 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37214 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37216 \begin{Details} \relax ! Undefined control sequence. l.37219 \samp {Darwin} and Solaris as \samp{SunOS}. ! Undefined control sequence. l.37219 \samp{Darwin} and Solaris as \samp {SunOS}. [361 [82 [110]] ! Undefined control sequence. l.37221 \code {Sys.info()} returns details of the platform \R{} is running on, ! Undefined control sequence. l.37221 ...o()} returns details of the platform \R {} is running on, ! Undefined control sequence. l.37222 whereas \code {\LinkA{R.version}{R.version}} gives details of the pla... ! Undefined control sequence. l.37222 whereas \code{\LinkA {R.version}{R.version}} gives details of the pla... ! Undefined control sequence. l.37222 ...sion}} gives details of the platform \R {} was ! Undefined control sequence. l.37223 built on: the \code {release} and \code{version} may well be different. ! Undefined control sequence. l.37223 built on: the \code{release} and \code {version} may well be different. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37224 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37226 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37228 \begin{ldescription} Underfull \hbox (badness 2126) in paragraph at lines 37221--37229 []\OT1/cmr/m/n/10 Sys.info() re-turns de-tails of the plat-form is run-ning on , whereas ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37229 \item[\code{sysname}] The operating system name. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37230 \item[\code{release}] The OS release. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37231 \item[\code{version}] The OS version. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37232 \item[\code{nodename}] A name by which the machine is known on the n... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37234 \item[\code{machine}] A concise description of the hardware, often t... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37235 \item[\code{log]in}] The user's login name, or \code{"unknown"} if it... ! Undefined control sequence. l.37235 ...login}] The user's login name, or \code {"unknown"} if it cannot be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37237 \item[\code{user}] The name of the real user ID, or \code{"unknown"}... ! Undefined control sequence. l.37237 ... The name of the real user ID, or \code {"unknown"} if it ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37239 \item[\code{effective\_user}] The name of the effective user ID, or ! Undefined control sequence. l.37240 \code {"unknown"} if it ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37244 \end{ldescription} ! Undefined control sequence. l.37245 The first five fields come from the \code {uname(2)} system call. The ! Undefined control sequence. l.37246 login name comes from \code {getlogin(2)}, and the user names from ! Undefined control sequence. l.37247 \code {getpwuid(getuid())} and \code{getpwuid(geteuid())} ! Undefined control sequence. l.37247 \code{getpwuid(getuid())} and \code {getpwuid(geteuid())} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37248 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37250 \begin{Note} \relax ! Undefined control sequence. l.37251 The meaning of \code {release} and \code{version} is system-dependent: ! Undefined control sequence. l.37251 The meaning of \code{release} and \code {version} is system-dependent: ! Undefined control sequence. l.37253 \code {release} contains a numeric version and \code{version} gives ! Undefined control sequence. l.37253 ...e} contains a numeric version and \code {version} gives ! Undefined control sequence. l.37254 ...tional information. Examples for \code {release}: ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37255 \begin{alltt} ! Missing $ inserted. $ l.37256 "4.1.3-100.fc21.x86_ 64" # Linux (Fedora) ! You can't use `macro parameter character #' in math mode. l.37256 "4.1.3-100.fc21.x86_64" # Linux (Fedora) ! You can't use `macro parameter character #' in math mode. l.37257 "3.2.0-4-amd64" # Linux (Debian) ! You can't use `macro parameter character #' in math mode. l.37258 "14.5.0" # macOS 10.10.5 ! You can't use `macro parameter character #' in math mode. l.37259 "5.11" # Solaris ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37260 \end{alltt} ! Missing $ inserted. $ l.37260 \end{alltt} ! Undefined control sequence. l.37268 The use of alternatives such as \code {system("whoami")} is not ! Undefined control sequence. l.37269 portable: the POSIX command \code {system("id")} is much more portable ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37272 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37274 \begin{SeeAlso} \relax ! Undefined control sequence. l.37275 \code {\LinkA{.Platform}{.Platform}}, and \code{\LinkA{R.version}{R.v... ! Undefined control sequence. l.37275 \code{\LinkA {.Platform}{.Platform}}, and \code{\LinkA{R.version}{R.v... ! Undefined control sequence. l.37275 ...LinkA{.Platform}{.Platform}}, and \code {\LinkA{R.version}{R.versi... ! Undefined control sequence. l.37275 ...Platform}{.Platform}}, and \code{\LinkA {R.version}{R.version}}. ! Undefined control sequence. l.37276 \code {\LinkA{sessionInfo}{sessionInfo}()} gives a synopsis of both y... ! Undefined control sequence. l.37276 \code{\LinkA {sessionInfo}{sessionInfo}()} gives a synopsis of both y... ! Undefined control sequence. l.37277 the \R {} session (and gives the OS version in a human-readable form). ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37278 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37280 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37281 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37283 # # An alternative (and probably better) way to get the login name on... ! You can't use `macro parameter character #' in horizontal mode. l.37283 ## An alternative (and probably better) way to get the login name on... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37285 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{E [83 Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. If @texttt R_ini t_mypkg[] @textrm calls @texttt R_ [111]xamples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37286 \end{Examples} ! Undefined control sequence. l.37287 \HeaderA {Sys.localeconv}{Find Details of the Numerical and Monetary ... ! Undefined control sequence. l.37288 \aliasA {localeconv}{Sys.localeconv}{localeconv} ! Undefined control sequence. l.37289 \keyword {utilities}{Sys.localeconv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37291 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37294 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37296 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37300 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37302 \begin{Details} \relax ! Undefined control sequence. l.37303 Normally \R {} is run without looking at the value of \env{LC\_NUMERIC}, ! Undefined control sequence. l.37303 ...un without looking at the value of \env {LC\_NUMERIC}, ! Undefined control sequence. l.37304 so the decimal point remains '\code {.}'. So the first three of these ! Undefined control sequence. l.37306 \code {LC\_NUMERIC} using \code{Sys.setlocale} in the current \R{} se... ! Undefined control sequence. l.37306 \code{LC\_NUMERIC} using \code {Sys.setlocale} in the current \R{} se... ! Undefined control sequence. l.37306 ... \code{Sys.setlocale} in the current \R {} session ! Undefined control sequence. l.37307 (when \R {} may not work correctly). ! Undefined control sequence. l.37310 the `Examples' section if the \code {LC\_MONETARY} category is ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37312 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37314 \begin{Value} ! Undefined control sequence. l.37318 It is possible to compile \R {} without support for locales, in which ! Undefined control sequence. l.37319 case the value will be \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37320 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37322 \begin{SeeAlso} \relax ! Undefined control sequence. l.37323 \code {\LinkA{Sys.setlocale}{Sys.setlocale}} for ways to set locales. ! Undefined control sequence. l.37323 \code{\LinkA {Sys.setlocale}{Sys.setlocale}} for ways to set locales. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37324 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37326 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37327 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37329 # # The results in the C locale are ! You can't use `macro parameter character #' in horizontal mode. l.37329 ## The results in the C locale are ! You can't use `macro parameter character #' in horizontal mode. l.37330 # # decimal_point thousands_sep grouping int_curr_s... ! You can't use `macro parameter character #' in horizontal mode. l.37330 ## decimal_point thousands_sep grouping int_curr_s... ! Missing $ inserted. $ l.37330 ## decimal_ point thousands_sep grouping int_curr_s... ! You can't use `macro parameter character #' in math mode. l.37331 # # "." "" "" ... ! You can't use `macro parameter character #' in math mode. l.37331 ## "." "" "" ... ! You can't use `macro parameter character #' in math mode. l.37332 # # currency_symbol mon_decimal_point mon_thousands_sep mon_gro... ! You can't use `macro parameter character #' in math mode. l.37332 ## currency_symbol mon_decimal_point mon_thousands_sep mon_gro... ! You can't use `macro parameter character #' in math mode. l.37333 # # "" "" "" ... ! You can't use `macro parameter character #' in math mode. l.37333 ## "" "" "" ... ! You can't use `macro parameter character #' in math mode. l.37334 # # positive_sign negative_sign int_frac_digits frac_d... ! You can't use `macro parameter character #' in math mode. l.37334 ## positive_sign negative_sign int_frac_digits frac_d... ! You can't use `macro parameter character #' in math mode. l.37335 # # "" "" "127" ... ! You can't use `macro parameter character #' in math mode. l.37335 ## "" "" "127" ... ! You can't use `macro parameter character #' in math mode. l.37336 # # p_cs_precedes p_sep_by_space n_cs_precedes n_sep_by_... ! You can't use `macro parameter character #' in math mode. l.37336 ## p_cs_precedes p_sep_by_space n_cs_precedes n_sep_by_... ! You can't use `macro parameter character #' in math mode. l.37337 # # "127" "127" "127" ... ! You can't use `macro parameter character #' in math mode. l.37337 ## "127" "127" "127" ... ! You can't use `macro parameter character #' in math mode. l.37338 # # p_sign_posn n_sign_posn ! You can't use `macro parameter character #' in math mode. l.37338 ## p_sign_posn n_sign_posn ! You can't use `macro parameter character #' in math mode. l.37339 # # "127" "127" ! You can't use `macro parameter character #' in math mode. l.37339 ## "127" "127" ! Missing $ inserted. $ l.37340 Underfull \hbox (badness 2951) in paragraph at lines 37318--37340 []\OT1/cmr/m/n/10 It is pos-si-ble to com-pile with-out sup-port for lo-cales, in which Underfull \hbox (badness 2772) in paragraph at lines 37318--37340 \OT1/cmr/m/n/10 case the value will be NULL. Sys.setlocaleSys.setlocale for wa ys to Overfull \hbox (971.68364pt too wide) in paragraph at lines 37318--37340 \OT1/cmr/m/n/10 decimal$[]\OML/cmm/m/it/10 ointthousands[]epgroupingint[]urr[]y mbol\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 """""""\OML/cmm/m/it/10 currency[]ymbolmon[]ecimal[]ointmon[]housands[]epmon[]rouping\OT1/cmr/m/n/10 "" """"""\OML/cmm/m/it/10 positive[]ignnegative[]ignint[]rac[]igitsfrac[]igits\OT1 /cmr/m/n/10 """""127""127"\OML/cmm/m/it/10 p[]s[]recedesp[]ep[]y[]pacen[]s[]rec edesn[]ep[]y[]pace\OT1/cmr/m/n/10 "127""127""127""127"\OML/cmm/m/it/10 p[]ign[] osnn[]ign[]osn\OT1/cmr/m/n/10 "127""127"$ [362] Appendix B [84]] ! You can't use `macro parameter character #' in vertical mode. l.37341 # # Now try your default locale (which might be "C"). ! You can't use `macro parameter character #' in vertical mode. l.37341 ## Now try your default locale (which might be "C"). ! You can't use `macro parameter character #' in horizontal mode. l.37343 # # The category may not be set: ! You can't use `macro parameter character #' in horizontal mode. l.37343 ## The category may not be set: ! You can't use `macro parameter character #' in horizontal mode. l.37344 # # the following may do so, but it might not be supported. ! You can't use `macro parameter character #' in horizontal mode. l.37344 ## the following may do so, but it might not be supported. ! Missing $ inserted. $ l.37345 Sys.setlocale("LC_ MONETARY", locale = "") ! You can't use `macro parameter character #' in math mode. l.37347 # # or set an appropriate value yourself, e.g. ! You can't use `macro parameter character #' in math mode. l.37347 ## or set an appropriate value yourself, e.g. ! Missing $ inserted. $ l.37351 Underfull \hbox (badness 2277) in paragraph at lines 37341--37351 \OT1/cmr/m/n/10 The cat-e-gory may not be set: the fol-low-ing may do so, but it Underfull \hbox (badness 5091) in paragraph at lines 37341--37351 \OT1/cmr/m/n/10 might not be sup-ported. Sys.setlocale("LC$[]\OML/cmm/m/it/10 O NETARY\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; locale \OT1/cmr/m/n/10 = Overfull \hbox (272.86038pt too wide) in paragraph at lines 37341--37351 \OT1/cmr/m/n/10 "")\OML/cmm/m/it/10 Sys:localeconv\OT1/cmr/m/n/10 ()\OML/cmm/m/ it/10 orsetanappropriatevalueyourself; e:g:Sys:setlocale\OT1/cmr/m/n/10 ("\OML/ cmm/m/it/10 LC[]ONETARY\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OM L/cmm/m/it/10 de[]T\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 Sys:localeconv\OT1/cmr/m/ n/10 ()\OML/cmm/m/it/10 Sys:setlocale\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 locale \ OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.37352 # # Not run: read.table("foo", dec=Sys.localeconv()["decimal_point"]) ! You can't use `macro parameter character #' in vertical mode. l.37352 ## Not run: read.table("foo", dec=Sys.localeconv()["decimal_point"]) ! Missing $ inserted. $ l.37352 ...e("foo", dec=Sys.localeconv()["decimal_ point"]) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37353 \end{ExampleCode} ! Missing $ inserted. $ l.37353 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37354 \end{Examples} ! Undefined control sequence. l.37355 \HeaderA {sys.parent}{Functions to Access the Function Call Stack}{sy... ! Undefined control sequence. l.37356 \aliasA {parent.frame}{sys.parent}{parent.frame} ! Undefined control sequence. l.37357 \aliasA {sys.call}{sys.parent}{sys.call} ! Undefined control sequence. l.37358 \aliasA {sys.calls}{sys.parent}{sys.calls} ! Undefined control sequence. l.37359 \aliasA {sys.frame}{sys.parent}{sys.frame} ! Undefined control sequence. l.37360 \aliasA {sys.frames}{sys.parent}{sys.frames} ! Undefined control sequence. l.37361 \aliasA {sys.function}{sys.parent}{sys.function} ! Undefined control sequence. l.37362 \aliasA {sys.nframe}{sys.paren [112t}{sys.nframe} ! Undefined control sequence. l.37363 \aliasA {sys.on.exit}{sys.parent}{sys.on.exit} ! Undefined control sequence. l.37364 \aliasA {sys.parents}{sys.parent}{sys.parents} ! Undefined control sequence. l.37365 \aliasA {sys.status}{sys.parent}{sys.status} ! Undefined control sequence. l.37366 \keyword {programming}{sys.parent} ! Undefined control sequence. l.37367 \keyword {data}{sys.parent} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37369 \begin{Description} \relax ! Undefined control sequence. l.37370 These functions provide access to \code {\LinkA{environment}{environm... ! Undefined control sequence. l.37370 ...unctions provide access to \code{\LinkA {environment}{environment}}s ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37373 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37375 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 []\OT1/cmr/m/n/10 Not run: read.table("foo", dec=Sys.localeconv()["decimal$[]\O ML/cmm/m/it/10 oint\OT1/cmr/m/n/10 "])$ Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 sys.parentFunctions to Ac-cess the Func-tion Call Stacksys.pare nt Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 par-ent.framesys.parentparent.frame sys.callsys.parentsys.call Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 sys.callssys.parentsys.calls sys.framesys.parentsys.frame Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 sys.framessys.parentsys.frames sys.functionsys.parentsys.functi on Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 sys.nframesys.parentsys.nframe sys.on.exitsys.parentsys.on.exit Underfull \hbox (badness 10000) in paragraph at lines 37352--37376 \OT1/cmr/m/n/10 sys.parentssys.parentsys.parents sys.statussys.parentsys.status pro-gram- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37390 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37392 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37393 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37394 \item[\code{which}] the frame number if non-negative, the number of ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37396 \item[\code{n}] the number of generations to go back. (See the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37398 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37399 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37401 \begin{Details} \relax ! Undefined control sequence. l.37402 \code {\LinkA{.GlobalEnv}{.GlobalEnv}} is given number 0 in the list ... ! Undefined control sequence. l.37402 \code{\LinkA {.GlobalEnv}{.GlobalEnv}} is given number 0 in the list ... ! Undefined control sequence. l.37405 of that function are returned by \code {sys.call}, \code{sys.function} ! Undefined control sequence. l.37405 ... are returned by \code{sys.call}, \code {sys.function} ! Undefined control sequence. l.37406 and \code {sys.frame} with the appropriate index. ! Undefined control sequence. l.37408 \code {sys.call}, \code{sys.frame} and \code{sys.function} accept ! Undefined control sequence. l.37408 \code{sys.call}, \code {sys.frame} and \code{sys.function} accept ! Undefined control sequence. l.37408 ...e{sys.call}, \code{sys.frame} and \code {sys.function} accept ! Undefined control sequence. l.37409 integer values for the argument \code {which}. Non-negative values of ! Undefined control sequence. l.37410 \code {which} are frame numbers whereas negative values are ! Undefined control sequence. l.37416 ... which the function was defined. \code {sys.parent} returns the ! Undefined control sequence. l.37417 number of the parent frame if \code {n} is 1 (the default), the ! Undefined control sequence. l.37418 grandparent if \code {n} is 2, and so on. See also the `Note'. ! Undefined control sequence. l.37420 \code {sys.nframe} returns an integer, the number of the current frame ! Undefined control sequence. l.37423 \code {sys.calls} and \code{sys.frames} give a pairlist of all the ! Undefined control sequence. l.37423 \code{sys.calls} and \code {sys.frames} give a pairlist of all the ! Undefined control sequence. l.37424 ...lls and frames, respectively, and \code {sys.parents} returns [363] Underfull \hbox (badness 2635) in paragraph at lines 7023--7029 @textrm `@texttt --no-site-file[]@textrm '[] was given. The name of this file is taken from the value Underfull \hbox (badness 2158) in paragraph at lines 7023--7029 @textrm of the @texttt R_PROFILE[] @textrm en-vi-ron-ment vari-able. If that v ari-able is un-set, the de-fault [85]] [113 ! Undefined control sequence. l.37428 Notice that even though the \code {sys.}\emph{xxx} functions (except ! Undefined control sequence. l.37429 \code {sys.status}) are interpreted, their contexts are not counted nor ! Undefined control sequence. l.37432 \code {sys.status()} returns a list with components \code{sys.calls}, ! Undefined control sequence. l.37432 ...)} returns a list with components \code {sys.calls}, ! Undefined control sequence. l.37433 \code {sys.parents} and \code{sys.frames}, the results of calls to ! Undefined control sequence. l.37433 \code{sys.parents} and \code {sys.frames}, the results of calls to ! Undefined control sequence. l.37435 \code {sys.status}: see the first example). Underfull \hbox (badness 1127) in paragraph at lines 37432--37436 []\OT1/cmr/m/n/10 sys.status() re-turns a list with com-po-nents sys.calls, sys .parents and ! Undefined control sequence. l.37437 \code {sys.on.exit()} returns the expression stored for use by ! Undefined control sequence. l.37438 \code {\LinkA{on.exit}{on.exit}} in the function currently being eval... ! Undefined control sequence. l.37438 \code{\LinkA {on.exit}{on.exit}} in the function currently being eval... ! Undefined control sequence. l.37442 \code {parent.frame(n)} is a convenient shorthand for ! Undefined control sequence. l.37443 \code {sys.frame(sys.parent(n))} (implemented slightly more efficient... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37444 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37446 \begin{Value} ! Undefined control sequence. l.37447 \code {sys.call} returns a call, \code{sys.function} a function ! Undefined control sequence. l.37447 \code{sys.call} returns a call, \code {sys.function} a function ! Undefined control sequence. l.37448 definition, and \code {sys.frame} and \code{parent.frame} return an ! Undefined control sequence. l.37448 definition, and \code{sys.frame} and \code {parent.frame} return an ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37452 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37454 \begin{Note} \relax ! Undefined control sequence. l.37455 Strictly, \code {sys.parent} and \code{parent.frame} refer to the ! Undefined control sequence. l.37455 Strictly, \code{sys.parent} and \code {parent.frame} refer to the ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37465 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37467 \begin{References} \relax ! Undefined control sequence. l.37470 Wadsworth \& Brooks/Cole. (Not \code {parent.frame}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37471 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37473 \begin{SeeAlso} \relax ! Undefined control sequence. l.37474 \code {\LinkA{eval}{eval}} for a usage of \code{sys.frame} and \code{... ! Undefined control sequence. l.37474 \code{\LinkA {eval}{eval}} for a usage of \code{sys.frame} and \code{... ! Undefined control sequence. l.37474 ...LinkA{eval}{eval}} for a usage of \code {sys.frame} and \code{pare... ! Undefined control sequence. l.37474 ...r a usage of \code{sys.frame} and \code {parent.frame}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37475 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37477 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37478 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.37482 # # Note: the first two examples will give different results ! You can't use `macro parameter character #' in vertical mode. l.37482 ## Note: the first two examples will give different results ! You can't use `macro parameter character #' in horizontal mode. l.37483 # # if run by example(). ! You can't use `macro parameter character #' in horizontal mode. l.37483 ## if run by example(). ! Undefined control sequence. l.37490 ...t("current frame is", sys.nframe(), "\n ") ! Undefined control sequence. l.37491 ... cat("parents are", sys.parents(), "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.37492 print(sys.function(0)) # ggg ! You can't use `macro parameter character #' in horizontal mode. l.37493 print(sys.function(2)) # gg Underfull \hbox (badness 6876) in paragraph at lines 37488--37498 \OT1/cmr/m/n/10 "") cat("parents are", sys.parents(), "") print(sys.function(0) ) ggg ! You can't use `macro parameter character #' in horizontal mode. l.37502 # # in frame 2 here ! You can't use `macro parameter character #' in horizontal mode. l.37502 ## in frame 2 here ! Undefined control sequence. l.37503 ...t("current frame is", sys.nframe(), "\n ") ! You can't use `macro parameter character #' in horizontal mode. l.37504 str(sys.calls()) # # list with two compon] [86ents t1() and t2() ! You can't use `macro parameter character #' in horizontal mode. l.37504 str(sys.calls()) ## list with two components t1() and t2() ! Undefined control sequence. l.37505 ... are frame numbers", sys.parents(), "\n ") ## 0 1 ! You can't use `macro parameter character #' in horizontal mode. l.37505 ... frame numbers", sys.parents(), "\n") # # 0 1 ! You can't use `macro parameter character #' in horizontal mode. l.37505 ...frame numbers", sys.parents(), "\n") ## 0 1 ! You can't use `macro parameter character #' in horizontal mode. l.37506 print(ls(envir = sys.frame(-1))) # # [1] "aa" "t2" ! You can't use `macro parameter character #' in horizontal mode. l.37506 print(ls(envir = sys.frame(-1))) ## [1] "aa" "t2" ! Undefined control sequence. l.37517 cat("exiting...\n ") ! You can't use `macro parameter character #' in horizontal mode. l.37520 # # gives 'language print(1)', prints 1 on exit ! You can't use `macro parameter character #' in horizontal mode. l.37520 ## gives 'language print(1)', prints 1 on exit ! You can't use `macro parameter character #' in vertical mode. l.37522 # # An example where the parent is not the next frame up the stack ! You can't use `macro parameter character #' in vertical mode. l.37522 ## An example where the parent is not the next frame up the stack ! You can't use `macro parameter character #' in horizontal mode. l.37523 # # since method dispatch uses a frame. ! You can't use `macro parameter character #' in horizontal mode. l.37523 ## since method dispatch uses a frame. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37535 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37536 \end{Examples} ! Undefined control sequence. l.37537 \HeaderA {Sys.readlink}{Read File Symbolic Links}{Sys.readlink} ! Undefined control sequence. l.37538 \keyword {file}{Sys.readlink} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37540 \begin{Description} \relax ! Undefined control sequence. l.37542 ...ed to, \emph{via} the system call \code {readlink}. Underfull \hbox (badness 6284) in paragraph at lines 37522--37543 []\OT1/cmr/m/n/10 An ex-am-ple where the par-ent is not the next frame up the Underfull \hbox (badness 3029) in paragraph at lines 37522--37543 \OT1/cmr/m/n/10 stack since method dis-patch uses a frame. as.double.foo <- fu nc- ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37546 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37548 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37552 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37554 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37555 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37556 \item[\code{paths}] character vector of file paths. Tilde expansion... ! Undefined control sequence. l.37557 see \code {\LinkA{path.expand}{path.expand}}. ! Undefined control sequence. l.37557 see \code{\LinkA {path.expand}{path.expand}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37558 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37559 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37561 \begin{Value} ! Undefined control sequence. l.37562 ...cter vector of the same length as \code {paths}. The ! Undefined control sequence. l.37563 ...e the path of the file linked to, \code {""} if the path is ! Undefined control sequence. l.37564 not a symbolic link, and \code {NA} if there is an error (e.g., the Underfull \hbox (badness 10000) in paragraph at lines 37556--37566 []\OT1/cmr/m/n/10 character vec-tor of file paths. Tilde ex-pan-sion is done: s ee [364] Overfull \hbox (30.03963pt too wide) in paragraph at lines 9771--9771 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [114]] [87 ! Undefined control sequence. l.37567 On platforms without the \code {readlink} system call, all elements are ! Undefined control sequence. l.37568 \code {""}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37569 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37571 \begin{SeeAlso} \relax ! Undefined control sequence. l.37572 \code {\LinkA{file.symlink}{file.symlink}} for the creation of symbol... ! Undefined control sequence. l.37572 \code{\LinkA {file.symlink}{file.symlink}} for the creation of symbol... ! Undefined control sequence. l.37573 their Windows analogues), \code {\LinkA{file.info}{file.info}} ! Undefined control sequence. l.37573 their Windows analogues), \code{\LinkA {file.info}{file.info}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37574 \end{SeeAlso} ! Undefined control sequence. l.37575 \HeaderA {Sys.setenv}{Set or Unset Environment Variables}{Sys.setenv} ! Undefined control sequence. l.37576 \aliasA {Sys.unsetenv}{Sys.setenv}{Sys.unsetenv} ! Undefined control sequence. l.37577 \keyword {environment}{Sys.setenv} ! Undefined control sequence. l.37578 \keyword {utilities}{Sys.setenv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37580 \begin{Description} \relax ! Undefined control sequence. l.37581 \code {Sys.setenv} sets environment variables (for other processes ! Undefined control sequence. l.37582 called from within \R {} or future calls to \code{\LinkA{Sys.getenv}{... ! Undefined control sequence. l.37582 ...om within \R{} or future calls to \code {\LinkA{Sys.getenv}{Sys.ge... ! Undefined control sequence. l.37582 ...in \R{} or future calls to \code{\LinkA {Sys.getenv}{Sys.getenv}} ... ! Undefined control sequence. l.37583 this \R {} process). Underfull \hbox (badness 1005) in paragraph at lines 37567--37584 []\OT1/cmr/m/n/10 On plat-forms with-out the read-link sys-tem call, all el-e-m ents are "". ! Undefined control sequence. l.37585 \code {Sys.unsetenv} removes environment variables. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37586 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37588 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37594 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37596 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37597 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37598 \item[\code{...}] named arguments with values coercible to a charact... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37599 \item[\code{x}] a character vector, or an object coercible to charac... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37600 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37601 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37603 \begin{Details} \relax ! Undefined control sequence. l.37604 Non-standard \R {} names must be quoted in \code{Sys.setenv}: see the ! Undefined control sequence. l.37604 ...dard \R{} names must be quoted in \code {Sys.setenv}: see the ! Undefined control sequence. l.37606 \code {"="}. Windows does, but the facilities provided by \R{} may not ! Undefined control sequence. l.37606 ...does, but the facilities provided by \R {} may not ! Undefined control sequence. l.37608 ...etting an environment variable to \code {""}, but Windows does ! Undefined control sequence. l.37609 not, and there \code {Sys.setenv(FOO = "")} unsets \env{FOO}. ! Undefined control sequence. l.37609 ...\code{Sys.setenv(FOO = "")} unsets \env {FOO}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37613 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37615 \begin{Value} ! Undefined control sequence. l.37617 ...ponding variable succeeded. (For \code {Sys.unsetenv} this ! LaTeX Error: \begin{document} ended by \end{Val]ue}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37619 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37621 \begin{Note} \relax ! Undefined control sequence. l.37622 If \code {Sys.unsetenv} is not supported, it will at least try to ! Undefined control sequence. l.37623 ...ue of the environment variable to \code {""}, with a ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37625 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37627 \begin{SeeAlso} \relax ! Undefined control sequence. l.37628 \code {\LinkA{Sys.getenv}{Sys.getenv}}, \LinkA{Startup}{Startup} for ... ! Undefined control sequence. l.37628 \code{\LinkA {Sys.getenv}{Sys.getenv}}, \LinkA{Startup}{Startup} for ... ! Undefined control sequence. l.37628 ...\LinkA{Sys.getenv}{Sys.getenv}}, \LinkA {Startup}{Startup} for way... ! Undefined control sequence. l.37629 variables for the \R {} session. ! Undefined control sequence. l.37631 \code {\LinkA{setwd}{setwd}} for the working directory. ! Undefined control sequence. l.37631 \code{\LinkA {setwd}{setwd}} for the working directory. ! Undefined control sequence. l.37634 The help for `\LinkA {environment variables}{environment variables}' ... ! Undefined control sequence. l.37635 environment variables used by \R {}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37636 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37638 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37639 \begin{ExampleCode} ! Missing $ inserted. $ l.37640 print(Sys.setenv(R_ TEST = "testit", "A+C" = 123)) # `A+C` could als... ! You can't use `macro parameter character #' in math mode. l.37640 ...env(R_TEST = "testit", "A+C" = 123)) # `A+C` could also be used ! You can't use `macro parameter character #' in math mode. l.37642 Sys.unsetenv("R_TEST") # may warn and not succeed ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37644 \end{ExampleCode} ! Missing $ inserted. $ l.37644 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37645 \end{Examples} ! Undefined control sequence. l.37646 \HeaderA {Sys.setFileTime}{Set File Time}{Sys.setFileTime} ! Undefined control sequence. l.37647 \keyword {file}{Sys.setFileTime} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37649 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37651 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37653 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 37634--37654 []\OT1/cmr/m/n/10 The help for `en-vi-ron-ment vari-able-sen-vi-ron-ment vari- Underfull \hbox (badness 10000) in paragraph at lines 37634--37654 \OT1/cmr/m/n/10 ables' lists many of the en-vi-ron-ment vari-ables used by . Underfull \hbox (badness 10000) in paragraph at lines 37634--37654 \OT1/cmr/m/n/10 print(Sys.setenv(R$[]\OML/cmm/m/it/10 EST \OT1/cmr/m/n/10 = "\O ML/cmm/m/it/10 testit\OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "\OML/ cmm/m/it/10 A \OT1/cmr/m/n/10 + \OML/cmm/m/it/10 C\OT1/cmr/m/n/10 " = 123))`\OM L/cmm/m/it/10 A \OT1/cmr/m/n/10 + Overfull \hbox (197.39403pt too wide) in paragraph at lines 37634--37654 \OML/cmm/m/it/10 C\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 couldalsobeusedSys:getenv\O T1/cmr/m/n/10 ("\OML/cmm/m/it/10 R[]EST\OT1/cmr/m/n/10 ")\OML/cmm/m/it/10 Sys:u nsetenv\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 R[]EST\OT1/cmr/m/n/10 ")\OML/cmm/m/it /10 maywarnandnotsucceedSys:getenv\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 R[]EST\OT1 /cmr/m/n/10 "\OML/cmm/m/it/10 ; unset \OT1/cmr/m/n/10 = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37657 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37659 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37660 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37661 \item[\code{path}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37664 \ [115item[\code{time}] ! Undefined control sequence. l.37665 A date-time of class \code {"\LinkA{POSIXct}{POSIXct}"} or an object ... ! Undefined control sequence. l.37665 A date-time of class \code{"\LinkA {POSIXct}{POSIXct}"} or an object ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37668 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37669 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37671 \begin{Details} \relax ! Undefined control sequence. l.37674 ...nix-alike it uses the system call \code {utimensat} if that is ! Undefined control sequence. l.37675 available, otherwise \code {utimes} or \code{utime}. On a POSIX file ! Undefined control sequence. l.37675 ...lable, otherwise \code{utimes} or \code {utime}. On a POSIX file ! Undefined control sequence. l.37677 Fractional seconds will set as from \R {} 3.4.0 on OSes with the ! Undefined control sequence. l.37680 On Windows it uses the system call \code {SetFileTime} to set the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37683 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37685 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37687 \end{Value} ! Undefined control sequence. l.37688 \HeaderA {Sys.sleep}{Suspend Execution for a Time Interval}{Sys.sleep} ! Undefined control sequence. l.37689 \keyword {utilities}{Sys.sleep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37691 \begin{Description} \relax ! Undefined control sequence. l.37692 Suspend execution of \R {} expressions for a specified time interval. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37693 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Underfull \hbox (badness 4752) in paragraph at lines 7295--7307 []@textrm In ad-di-tion, you can use op-tions `@texttt --arch=[]@textrm '[], `@ texttt --no-environ[]@textrm '[], `@texttt --no-init-file[]@textrm '[], [88 l.37695 \begin{Usage} [365]]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37699 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37701 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37702 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37703 \item[\code{time}] The time interval to suspend execution for, in se... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37704 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37705 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37707 \begin{Details} \relax ! Undefined control sequence. l.37708 Using this function allows \R {} to temporarily be given very low ! Undefined control sequence. l.37710 ... is to allow a process launched from \R {} to set ! Undefined control sequence. l.37711 ...f up and read its input files before \R {} execution is resumed. ! Undefined control sequence. l.37713 ... this function suspends execution of \R {} ! Undefined control sequence. l.37716 (e.g.~by \samp {Ctrl-C} or \samp{Esc} at the \R{} console). ! Undefined control sequence. l.37716 (e.g.~by \samp{Ctrl-C} or \samp {Esc} at the \R{} console). ! Undefined control sequence. l.37716 ...y \samp{Ctrl-C} or \samp{Esc} at the \R {} console). ! Undefined control sequence. l.37722 \code {time} must be non-negative (and not \code{NA} nor \code{NaN}): ! Undefined control sequence. l.37722 ...me} must be non-negative (and not \code {NA} nor \code{NaN}): ! Undefined control sequence. l.37722 ...n-negative (and not \code{NA} nor \code {NaN}): ! Undefined control sequence. l.37723 \code {Inf} is allowed (and might be appropriate if the intention is to ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37727 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explana [89tion. Type H for immediate help. ... l.37729 \begin{Value} ! Undefined control sequence. l.37730 Invisible \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37731 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37733 \begin{Note} \relax ! Undefined control sequence. l.37735 \code {sleep} system call (although on Windows it does make use of ! Undefined control sequence. l.37736 \code {Sleep}). ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37737 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37739 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37740 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37746 proc.time() - p1 # The cpu usage should be negligible ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37749 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37750 \end{Examples} ! Undefined control sequence. l.37751 \HeaderA {sys.source}{Parse and Evaluate Expressions from a File}{sys... ! Undefined control sequence. l.37752 \keyword {file}{sys.source} ! Undefined control sequence. l.37753 \keyword {utilities}{sys.source} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37755 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37758 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37760 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37766 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37768 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37769 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37770 \item[\code{file}] a character string naming the file to be read from ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37771 \item[\code{envir}] an \R{} object specifying the environment in whi... ! Undefined control sequence. l.37771 \item[\code{envir}] an \R {} object specifying the environment in whi... ! Undefined control sequence. l.37773 The default value \code {NULL} corresponds to evaluation in the base ! Undefined control sequence. l.37775 typically supply an explicit \code {envir} argument. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37776 \item[\code{chdir}] logical; if \code{TRUE}, the \R{} working direct... ! Undefined control sequence. l.37776 \item[\code{chdir}] logical; if \code {TRUE}, the \R{} working direct... ! Undefined control sequence. l.37776 ...chdir}] logical; if \code{TRUE}, the \R {} working directory is ! Undefined control sequence. l.37777 changed to the directory containing \code {file} for evaluating. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37778 \item[\code{keep.source}] logical. If \code{TRUE}, functions keep ! Undefined control sequence. l.37778 ...[\code{keep.source}] logical. If \code {TRUE}, functions keep ! Undefined control sequence. l.37780 \code {\LinkA{options}{options}(keep.source = *)} for more details. ! Undefined control sequence. l.37780 \code{\LinkA {options}{options}(keep.source = *)} for more details. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37781 \item[\code{toplevel.env}] an \R{} environment to be used as top lev... ! Undefined control sequence. l.37781 \item[\code{toplevel.env}] an \R {} environment to be used as top lev... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX [116]manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37784 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37785 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37787 \begin{Details} \relax ! Undefined control sequence. l.37788 For large files, \code {keep.source = FALSE} may save quite a bit of ! Undefined control sequence. l.37793 call \code {\LinkA{topenv}{topenv}()}, which will return the namespac... ! Undefined control sequence. l.37793 call \code{\LinkA {topenv}{topenv}()}, which will return the namespac... ! Undefined control sequence. l.37794 the environment set up by \code {sys.source}, or the global environment ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37796 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37798 \begin{SeeAlso} \relax ! Undefined control sequence. l.37799 \code {\LinkA{source}{source}}, and \code{\LinkA{library}{library}} w... ! Undefined control sequence. l.37799 \code{\LinkA {source}{source}}, and \code{\LinkA{library}{library}} w... ! Undefined control sequence. l.37799 \code{\LinkA{source}{source}}, and \code {\LinkA{library}{library}} w... ! Undefined control sequence. l.37799 ...inkA{source}{source}}, and \code{\LinkA {library}{library}} which ... ! Undefined control sequence. l.37800 \code {sys.source}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37801 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37803 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37804 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37805 # # a simple way to put some objects in an environment ! You can't use `macro parameter character #' in horizontal mode. l.37805 ## a simple way to put some objects in an environment ! You can't use `macro parameter character #' in horizontal mode. l.37806 # # high on the search path ! You can't use `macro parameter character #' in horizontal mode. l.37806 ## high on the search path ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37815 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37816 \end{Examples} ! Undefined control sequence. l.37817 \HeaderA {Sys.time}{Get Current Date and Time}{Sys.time} ! Undefined control sequence. l.37818 \aliasA {Sys.Date}{Sys.time}{Sys.Date} ! Undefined control sequence. l.37819 \keyword {utilities}{Sys.time} ! Undefined control sequence. l.37820 \keyword {chron}{Sys.time} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37822 \begin{Description} \relax ! Undefined control sequence. l.37823 \code {Sys.time} and \code{Sys.Date} returns the system's idea of the ! Undefined control sequence. l.37823 \code{Sys.time} and \code {Sys.Date} returns the system's idea of the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37825 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37827 \begin{Usage} [366] [90] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37832 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37834 \begin{Details} \relax ! Undefined control sequence. l.37835 \code {Sys.time} returns an absolute date-time value which can be ! Undefined control sequence. l.37838 \code {Sys.Date} returns the current day in the current \LinkA{time z... ! Undefined control sequence. l.37838 ...s the current day in the current \LinkA {time zone}{time zone}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37839 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37841 \begin{Value} ! Undefined control sequence. l.37842 \code {Sys.time} returns an object of class \code{"POSIXct"} (see ! Undefined control sequence. l.37842 ....time} returns an object of class \code {"POSIXct"} (see ! Undefined control sequence. l.37843 \LinkA {DateTimeClasses}{DateTimeClasses}). On almost all systems it... ! Undefined control sequence. l.37848 \code {Sys.Date} returns an object of class \code{"Date"} (see \LinkA... ! Undefined control sequence. l.37848 ....Date} returns an object of class \code {"Date"} (see \LinkA{Date}... ! Undefined control sequence. l.37848 ...ject of class \code{"Date"} (see \LinkA {Date}{Date}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37849 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37851 \begin{Note} \relax ! Undefined control sequence. l.37852 \code {Sys.time} may return fractional seconds, but they are ignored by ! Undefined control sequence. l.37853 ...rsions (e.g., printing) for class \code {"POSIXct"}. ! Undefined control sequence. l.37854 See the examples and \code {\LinkA{format.POSIXct}{format.POSIXct}} f... ! Undefined control sequence. l.37854 See the examples and \code{\LinkA {format.POSIXct}{format.POSIXct}} f... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37855 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37857 \beg] [117 Appendix C [91]in{SeeAlso} \relax ! Undefined control sequence. l.37858 \code {\LinkA{date}{date}} for the system time in a fixed-format char... ! Undefined control sequence. l.37858 \code{\LinkA {date}{date}} for the system time in a fixed-format char... ! Undefined control sequence. l.37861 \code {\LinkA{Sys.timezone}{Sys.timezone}}. ! Undefined control sequence. l.37861 \code{\LinkA {Sys.timezone}{Sys.timezone}}. ! Undefined control sequence. l.37863 \code {\LinkA{system.time}{system.time}} for measuring elapsed/CPU ti... ! Undefined control sequence. l.37863 \code{\LinkA {system.time}{system.time}} for measuring elapsed/CPU ti... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37864 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37866 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37867 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37870 # # print with possibly greater accuracy: ! You can't use `macro parameter character #' in horizontal mode. l.37870 ## print with possibly greater accuracy: ! You can't use `macro parameter character #' in vertical mode. l.37875 # # locale-specific version of date() ! You can't use `macro parameter character #' in vertical mode. l.37875 ## locale-specific version of date() ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37879 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37880 \end{Examples} ! Undefined control sequence. l.37881 \HeaderA {Sys.which}{Find Full Paths to Executables}{Sys.which} ! Undefined control sequence. l.37882 \keyword {utilities}{Sys.which} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37884 \begin{Description} \relax ! Undefined control sequence. l.37885 ...n interface to the system command \code {which}, or to an ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37887 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37889 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual o]r LaTeX Companion for explanation. Type H for immediate help. ... l.37893 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37895 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37896 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37897 \item[\code{names}] Character vector of names or paths of possible e... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37898 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37899 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37901 \begin{Details} \relax ! Undefined control sequence. l.37902 The system command \command {which} reports on the full path names of ! Undefined control sequence. l.37907 \file {.exe}, \file{.com}, \file{.cmd} or \file{.bat}. Such files need ! Undefined control sequence. l.37907 \file{.exe}, \file {.com}, \file{.cmd} or \file{.bat}. Such files need ! Undefined control sequence. l.37907 \file{.exe}, \file{.com}, \file {.cmd} or \file{.bat}. Such files need ! Undefined control sequence. l.37907 ...exe}, \file{.com}, \file{.cmd} or \file {.bat}. Such files need ! Undefined control sequence. l.37908 ... be executable, but they are what \code {\LinkA{system}{system}} ! Undefined control sequence. l.37908 ...cutable, but they are what \code{\LinkA {system}{system}} ! Undefined control sequence. l.37911 On a Unix-alike the full path to \code {which} (usually ! Undefined control sequence. l.37912 \file {/usr/bin/which}) is found when \R{} is installed. ! Undefined control sequence. l.37912 \file{/usr/bin/which}) is found when \R {} is installed. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37913 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37915 \begin{Value} ! Undefined control sequence. l.37916 ...cter vector of the same length as \code {names}, named by ! Undefined control sequence. l.37917 \code {names}. The elements are either the full path to the ! Undefined control sequence. l.37919 found. Typically the indication is \code {""}, but this does depend on ! Undefined control sequence. l.37920 ...e known exceptions are changed to \code {""}). Missing ! Undefined control sequence. l.37921 values in \code {names} have missing return values. ! Undefined control sequence. l.37924 with \code {\bsl{}} as the path delimiter. ! Undefined control sequence. l.37924 with \code{\bsl {}} as the path delimiter. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37925 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37927 \begin{Note} \relax ! Undefined control sequence. l.37928 ... this calls the system command \command {which}: since ! Undefined control sequence. l.37931 of \command {csh} aliases. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37932 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37934 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37935 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.37936 # # the first two are likely to exist everywhere ! You can't use `macro parameter character #' in horizontal mode. l.37936 ## the first two are likely to exist everywhere ! You can't use `macro parameter character #' in horizontal mode. l.37937 # # texi2dvi exists on most Unix-alikes and under MiKTeX ! You can't use `macro parameter character #' in horizontal mode. l.37937 ## texi2dvi exists on most Unix-alikes and under MiKTeX ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37939 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37940 \end{Examples} ! Undefined control sequence. l.37941 \HeaderA {system}{Invoke a System Command}{system} ! Undefined control sequence. l.37942 \aliasA {shell}{system}{shell} ! Undefined control sequence. l.37943 \keyword {interface}{system} ! Undefined control sequence. l.37944 \keyword {file}{sys [118tem} ! Undefined control sequence. l.37945 \keyword {utilities}{system} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37947 \begin{Description} \relax ! Undefined control sequence. l.37948 \code {system} invokes the OS command specified by \code{command}. ! Undefined control sequence. l.37948 ...vokes the OS command specified by \code {command}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37949 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37951 \begin{Usage} [367]] [92 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37958 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37960 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37961 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37962 \item[\code{command}] the system command to be invoked, as a charact... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37963 \item[\code{intern}] a logical (not \code{NA}) which indicates wheth... ! Undefined control sequence. l.37963 \item[\code{intern}] a logical (not \code {NA}) which indicates wheth... ! Undefined control sequence. l.37964 capture the output of the command as an \R {} character vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37965 \item[\code{ignore.stdout, ignore.stderr}] a logical (not \code{NA}) ! Undefined control sequence. l.37965 ...t, ignore.stderr}] a logical (not \code {NA}) ! Undefined control sequence. l.37966 ...ating whether messages written to \file {stdout} or ! Undefined control sequence. l.37967 \file {stderr} should be ignored. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37968 \item[\code{wait}] a logical (not \code{NA}) indicating whether the ... ! Undefined control sequence. l.37968 \item[\code{wait}] a logical (not \code {NA}) indicating whether the ... ! Undefined control sequence. l.37968 ...ot \code{NA}) indicating whether the \R {} ! Undefined control sequence. l.37971 always wait) if \code {intern = TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37972 \item[\code{input}] if a character vector is supplied, this is copie... ! Undefined control sequence. l.37974 \code {command} is redirected to the file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37975 ...tput.on.console, minimized, invisible}] arguments ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37978 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37979 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37981 \begin{Details} \relax ! Undefined control sequence. l.37983 \code {\LinkA{system2}{system2}} for a more portable and flexible int... ! Undefined control sequence. l.37983 \code{\LinkA {system2}{system2}} for a more portable and flexible int... ! Undefined control sequence. l.37986 \code {command} is parsed as a command plus arguments separated by ! Undefined control sequence. l.37989 \code {\LinkA{shQuote}{shQuote}}. ! Undefined control sequence. l.37989 \code{\LinkA {shQuote}{shQuote}}. ! Undefined control sequence. l.37990 ...command line to a shell (normally \file {/bin/sh}, ! Undefined control sequence. l.37991 and POSIX requires that shell), so \code {command} can be anything the ! Undefined control sequence. l.37993 ...in multiple commands separated by \code {;}. ! Undefined control sequence. l.37995 On Windows, \code {system} does not use a shell and there is a separate ! Undefined control sequence. l.37996 function \code {shell} which passes command lines to a shell. ! Undefined control sequence. l.37998 If \code {intern} is \code{TRUE} then \code{popen} is used to invoke the ! Undefined control sequence. l.37998 If \code{intern} is \code {TRUE} then \code{popen} is used to invoke the ! Undefined control sequence. l.37998 If \code{intern} is \code{TRUE} then \code {popen} is used to invoke the ! Undefined control sequence. l.37999 ...put collected, line by line, into an \R {} ! Undefined control sequence. l.38000 \code {\LinkA{character}{character}} vector. If \code{intern} is \co... ! Undefined control sequence. l.38000 \code{\LinkA {character}{character}} vector. If \code{intern} is \co... ! Undefined control sequence. l.38000 ...haracter}{character}} vector. If \code {intern} is \code{FALSE} then ! Undefined control sequence. l.38000 ...er}} vector. If \code{intern} is \code {FALSE} then ! Undefined control sequence. l.38001 the C function \code {system} is used to invoke the command. ! Undefined control sequence. l.38003 \code {wait} is implemented by appending \code{\&} to the command: this ! Undefined control sequence. l.38003 ...wait} is implemented by appending \code {\&} to the command: this ! Undefined control sequence. l.38010 There are many pitfalls in using \code {system} to ascertain if a ! Undefined control sequence. l.38011 command can be run --- \code {\LinkA{Sys.which}{Sys.which}} is more s... ! Undefined control sequence. l.38011 command can be run --- \code{\LinkA {Sys.which}{Sys.which}} is more s... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38012 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38014 \begin{Value} ! Undefined control sequence. l.38015 If \code {intern = TRUE}, a character vector giving the output of the ! Undefined control sequence. l.38017 ... If the command could not be run an \R {} ! Undefined control sequence. l.38019 If \code {command} runs but gives a non-zero exit status this will be ! Undefined control sequence. l.38020 ...th a warning and in the attribute \code {"status"} of the ! Undefined control sequence. l.38021 result: an attribute \code {"errmsg"} may also be available ! Undefined control sequence. l.38023 If \code {intern = FALSE}, the return value is an error code (\code{0} ! Undefined control sequence. l.38023 ...he return value is an error code (\code {0} ! Undefined control sequence. l.38026 value is \code {127}. Otherwise if \code{wait = TRUE} the value is the ! Undefined control sequence. l.38026 value is \code{127}. Otherwise if \code {wait = TRUE} the value is the ! Undefined control sequence. l.38027 ...s returned by the command, and if \code {wait = FALSE} it is ! Undefined control sequence. l.38028 \code {0} (the conventional success value). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38029 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38031 \begin{Section} {Stdout and stderr} ! Undefined control sequence. l.38032 For command-line \R {}, error messages written to \file{stderr} will be ! Undefined control sequence. l.38032 ...e \R{}, error messages written to \file {stderr} will be ! Undefined control sequence. l.38033 sent to the terminal unless \code {ignore.stderr = TRUE}. They can be ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38035 \begin{alltt} system("some command 2>&1", intern = TRUE) ! Misplaced alignment tab character &. l.38035 \begin{alltt} system("some command 2>& 1", intern = TRUE) ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... Appendix D l.38036 \end{alltt} [368 [93] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.vrs] ! Undefined control sequence. l.38039 ...s, what happens to output sent to \file {stdout} or ! Undefined control sequence. l.38040 \file {stderr} if \code{intern = FALSE} is interface-specific, and it ! Undefined control sequence. l.38040 \file{stderr} if \code {intern = FALSE} is interface-specific, and it ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38043 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38045 \begin{Section} {Differences between Unix and Windows} ! Undefined control sequence. l.38048 which this \R {} function is built. So it should not be surprising that ! Undefined control sequence. l.38049 ...y differences between OSes in how \code {system} behaves. ! Undefined control sequence. l.38056 \code {system} launches a shell which then runs \code{command}. On ! Undefined control sequence. l.38056 ... launches a shell which then runs \code {command}. On ! Undefined control sequence. l.38057 ...he command is run directly -- use \code {shell} for an ! Undefined control sequence. l.38058 interface which runs \code {command} \emph{via} a shell (by default ! Undefined control sequence. l.38059 the Windows shell \command {cmd.exe}, which has many differences from ! Undefined control sequence. l.38063 work in \code {system} (redirection sometimes does, but we have seen ! Undefined control sequence. l.38065 \code {\LinkA{system2}{system2}} (or \code{shell}) must be used on Wi... ! Undefined control sequence. l.38065 \code{\LinkA {system2}{system2}} (or \code{shell}) must be used on Wi... ! Undefined control sequence. l.38065 \code{\LinkA{system2}{system2}} (or \code {shell}) must be used on Wi... ! Undefined control sequence. l.38067 \item What happens to \code {stdout} and \code{stderr} when not ! Undefined control sequence. l.38067 ...What happens to \code{stdout} and \code {stderr} when not ! Undefined control sequence. l.38068 captured depends on how \R {} is running: Windows batch commands behave ! Undefined control sequence. l.38070 generally lost. \code {system(intern = TRUE)} captures \file{stderr} ! Undefined control sequence. l.38070 ...e{system(intern = TRUE)} captures \file {stderr} ! Undefined control sequence. l.38071 ...om the Windows GUI console unless \code {ignore.stderr = ! Undefined control sequence. l.38075 differed between \R {} versions). ! Undefined control sequence. l.38077 \item The quoting conventions for \code {command} differ, but ! Undefined control sequence. l.38078 \code {\LinkA{shQuote}{shQuote}} is a portable interface. ! Undefined control sequence. l.38078 \code{\LinkA {shQuote}{shQuote}} is a portable interface. ! Undefined control sequence. l.38080 \item Arguments \code {show.output.on.console}, \code{minimized}, ! Undefined control sequence. l.38080 ...ts \code{show.output.on.console}, \code Overfull \hbox (61.1125pt too wide) in paragraph at lines 10210--10212 [][][]@smallrm For ex-am-ple, `@smalltt _GLIBCXX_USE_CXX11_ABI[]@smallrm '[] in @smalltt g++[] @smallrm 5.1 and later: [][]@smalltt https://gcc.gnu.org/online docs/libstdc++/manual/using_ [119 {minimized}, ! Undefined control sequence. l.38081 \code {invisible} only do something on Windows (and are most relevant ! Undefined control sequence. l.38082 to \command {Rgui} there). ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38086 \end{Section} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38088 \begin{SeeAlso} \relax ! Undefined control sequence. l.38089 \command {man system} and \command{man sh} for how this is implemented ! Undefined control sequence. l.38089 \command{man system} and \command {man sh} for how this is implemented ! Undefined control sequence. l.38092 \code {\LinkA{.Platform}{.Platform}} for platform-specific variables. ! Undefined control sequence. l.38092 \code{\LinkA {.Platform}{.Platform}} for platform-specific variables. ! Undefined control sequence. l.38094 \code {\LinkA{pipe}{pipe}} to set up a pipe connection. ! Undefined control sequence. l.38094 \code{\LinkA {pipe}{pipe}} to set up a pipe connection. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38095 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38097 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38098 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38099 # list all files in the current directory using the -F flag ! You can't use `macro parameter character #' in horizontal mode. l.38100 # # Not run: system("ls -F") ! You can't use `macro parameter character #' in horizontal mode. l.38100 ## Not run: system("ls -F") ! You can't use `macro parameter character #' in vertical mode. l.38102 # t1 is a character vector, each element giving a line of output fro... ! You can't use `macro parameter character #' in horizontal mode. l.38103 # (if the platform has who) ! You can't use `macro parameter character #' in horizontal mode. l.38107 # zero-length result since file does not exist, and will give warning. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38108 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38109 \end{Examples} ! Undefined control sequence. l.38110 \HeaderA {system.file}{Find Names of R System Files}{system.file} ! Undefined control sequence. l.38111 \keyword {file}{system.file} ! Undefined control sequence. l.38112 \keyword {utilities}{system.file} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38114 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38116 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38118 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38123 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38125 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38126 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38127 \item[\code{...}] character vectors, specifying subdirectory and fil... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38130 \item[\code{package}] a character string with the name of a single p... [369]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38132 \item[\code{lib.loc}] a character vector with path names of \R{} lib... ! Undefined control sequence. l.38132 ... character vector with path names of \R {} libraries. ! Undefined control sequence. l.38133 ...e meaning of the default value of \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38134 \item[\code{mustWork}] logical. If \code{TRUE}, an error is given i... ! Undefined control sequence. l.38134 \item[\code{mustWork}] logical. If \code {TRUE}, an error is given i... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38136 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38137 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38139 \begin{Details} \relax ! Undefined control sequence. l.38141 \code {\LinkA{file.exists}{file.exists}}. So file paths are only ret... ! Undefined control sequence. l.38141 \code{\LinkA {file.exists}{file.exists}}. So file paths are only ret... ! Undefined control sequence. l.38144 The unnamed arguments in \code {...} are usually character strings, but ! Undefined control sequence. l.38147 This uses \code {\LinkA{find.package}{find.package}} to find the pack... ! Undefined control sequence. l.38147 This uses \code{\LinkA {find.package}{find.package}} to find the pack... ! Undefined control sequence. l.38148 with the default \code {lib.loc = NULL} looks first for attached ! Undefined control sequence. l.38149 ...es then in each library listed in \code {\LinkA{.libPaths}{.libPat... ! Undefined control sequence. l.38149 ... in each library listed in \code{\LinkA {.libPaths}{.libPaths}()}. ! Undefined control sequence. l.38151 this will look only on \code {\LinkA{.libPaths}{.libPaths}()}. ! Undefined control sequence. l.38151 this will look only on \code{\LinkA {.libPaths}{.libPaths}()}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38152 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38154 \begin{Value} ! Undefined control sequence. l.38156 that matched \code {...}, or the empty string, \code{""}, if none ! Undefined control sequence. l.38156 ... \code{...}, or the empty string, \code {""}, if none ! Undefined control sequence. l.38157 matched (unless \code {mustWork = TRUE}). ! Undefined control sequence. l.38161 \code {system.file()} with no arguments gives the root of the ! Undefined control sequence. l.38162 \pkg {base} package. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38163 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38165 \begin{SeeAlso} \relax ! Undefined control sequence. l.38166 \code {\LinkA{R.home}{R.home}} for the root directory of the \R{} ! Undefined control sequence. l.38166 \code{\LinkA {R.home}{R.home}} for the root directory of the \R{} ! Undefined control sequence. l.38166 ...home}} for the root directory of the \R {} ! Undefined control sequence. l.38167 installation, \code {\LinkA{list.files}{list.files}}. ! Undefined control sequence. l.38167 installation, \code{\LinkA {list.files}{list.files}}. Underfull \hbox (badness 1132) in paragraph at lines 38161--38168 []\OT1/cmr/m/n/10 system.file() with no ar-gu-ments gives the root of the base pack-age. ! Undefined control sequence. l.38169 \code {\LinkA{Sys.glob}{Sys.glob}} to find paths via wildcards. ! Undefined control sequence. l.38169 \code{\LinkA {Sys.glob}{Sys.glob}} to find paths via wildcards. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38170 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38172 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38173 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38174 system.file() # The root of the 'base' package ! You can't use `macro parameter character #' in horizontal mode. l.38175 system.file(package = "stats") # The root of package 'stats' ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38178 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38179 \end{Examples} ! Undefined control sequence. l.38180 \HeaderA {system.time}{CPU Time Used}{system.time} ! Undefined control sequence. l.38181 \aliasA {unix.time}{system.time}{unix.time} ! Undefined control sequence. l.38182 \keyword {utilities}{system.time} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38184 \begin{Description} \relax ! Undefined control sequence. l.38185 Return CPU (and other) times that \code {expr} used. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38186 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38188 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38193 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38195 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38196 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38197 \item[\code{expr}] Valid \R{} expression to be timed. ! Undefined control sequence. l.38197 \item[\code{expr}] Valid \R {} expression to be timed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38198 \item[\code{gcFirst}] Logical - should a garbage collection be perfo... ! Undefined control sequence. l.38199 ...ly before the timing? Default is \code {TRUE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38200 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38201 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38203 \begin{Details} [94 \relax ! Undefined control sequence. l.38204 \code {system.time} calls the function \code{\LinkA{proc.time}{proc.t... ! Undefined control sequence. l.38204 ...e{system.time} calls the function \code {\LinkA{proc.time}{proc.ti... ! Undefined control sequence. l.38204 ...m.time} calls the function \code{\LinkA {proc.time}{proc.time}}, ! Undefined control sequence. l.38205 evaluates \code {expr}, and then calls \code{proc.time} once more, ! Undefined control sequence. l.38205 ...uates \code{expr}, and then calls \code {proc.time} once more, ! Undefined control sequence. l.38206 ...ng the difference between the two \code {proc.time} calls. ! Undefined control sequence. l.38208 \code {unix.time} has been an alias of \code{system.time}, for ! Undefined control sequence. l.38208 ...e{unix.time} has been an alias of \code {system.time}, for ! Undefined control sequence. l.38213 \code {gcFirst} is \code{TRUE} a garbage collection (\code{\LinkA{gc}... ! Undefined control sequence. l.38213 \code{gcFirst} is \code {TRUE} a garbage collection (\code{\LinkA{gc}... ! Undefined control sequence. l.38213 ...\code{TRUE} a garbage collection (\code {\LinkA{gc}{gc}}) ! Undefined control sequence. l.38213 ...RUE} a garbage collection (\code{\LinkA {gc}{gc}}) ! Undefined control sequence. l.38214 ...ediately before the evaluation of \code {expr}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38216 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38218 \begin{Value} ! Undefined control sequence. l.38219 A object of class \code {"proc\_time"}: see ! Undefined control sequence. l.38220 \code {\LinkA{proc.time}{proc.time}} for details. ! Undefined control sequence. l.38220 \code{\LinkA {proc.time}{proc.time}} for details. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38221 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38223 \begin{SeeAlso} \relax ! Undefined control sequence. l.38224 \code {\LinkA{proc.time}{proc.time}}, \code{\LinkA{time}{time}} which... ! Undefined control sequence. l.38224 \code{\LinkA {proc.time}{proc.time}}, \code{\LinkA{time}{time}} which... ! Undefined control sequence. l.38224 \code{\LinkA{proc.time}{proc.time}}, \code {\LinkA{time}{time}} which... ! Undefined control sequence. l.38224 ...kA{proc.time}{proc.time}}, \code{\LinkA {time}{time}} which is for... ! Undefined control sequence. l.38226 \code {\LinkA{Sys.time}{Sys.time}} to get the current date \& time. ! Undefined control sequence. l.38226 \code{\LinkA {Sys.time}{Sys.time}} to get the current date \& time. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38227 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38229 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38230 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38233 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.38233 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.38235 # Purpose: Test if system.time works ok; n: loop size ! You can't use `macro parameter character #' in horizontal mode. l.38238 # -- Try to interrupt one of the following (using Ctrl-C / Escape): ! You can't use `macro parameter character #' in horizontal mode. l.38239 exT() # - about 4 secs on a 2.5GHz Xeon ! You can't use `macro parameter character #' in horizontal mode. l.38240 system.time(exT()) # ~ +/- same ! You can't use `macro parameter character #' in vertical mode. l.38242 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.38242 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38243 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38244 \end{Examples} ! Undefined control sequence. l.38245 \HeaderA {system2}{Invoke a System Command}{system2} ! Undefined control sequence. l.38246 \keyword {interface}{system2} ! Undefined control sequence. l.38247 \keyword {file}{system2} ! Undefined control sequence. l.38248 \keyword {utilities}{system2} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38250 \begin{Description} \relax ! Undefined control sequence. l.38251 \code {system2} invokes the OS command specified by \code{command}. ! Undefined control sequence. l.38251 ...vokes the OS command specified by \code {command}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38252 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38254 \begin{Usage} [370 Overfull \hbox (16.31242pt too wide) in paragraph at lines 10329--10329 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [120]]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38261 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38263 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38264 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38265 \item[\code{command}] the system command to be invoked, as a charact... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38266 \item[\code{args}] a character vector of arguments to \command{comma... ! Undefined control sequence. l.38266 ...aracter vector of arguments to \command {command}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38267 \item[\code{stdout, stderr}] where output to \file{stdout} or ! Undefined control sequence. l.38267 ...{stdout, stderr}] where output to \file {stdout} or ! Undefined control sequence. l.38268 \file {stderr} should be sent. Possible values are \code{""}, to the... ! Undefined control sequence. l.38268 ...uld be sent. Possible values are \code {""}, to the \R{} ! Undefined control sequence. l.38268 ...ossible values are \code{""}, to the \R {} ! Undefined control sequence. l.38269 console (the default), \code {NULL} or \code{FALSE} (discard output), ! Undefined control sequence. l.38269 ...ole (the default), \code{NULL} or \code {FALSE} (discard output), ! Undefined control sequence. l.38270 \code {TRUE} (capture the output in a character vector) or a ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38272 \item[\code{stdin}] should input be diverted? \code{""} means the d... ! Undefined control sequence. l.38272 ...tdin}] should input be diverted? \code {""} means the default, ! Undefined control sequence. l.38274 if \code {input} is supplied. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38275 \item[\code{input}] if a character vector is supplied, this is copie... ! Undefined control sequence. l.38277 \code {command} is redirected to the file. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38278 \item[\code{env}] character vector of name=value strings to set envi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38280 \item[\code{wait}] a logical (not \code{NA}) indicating whether the ... ! Undefined control sequence. l.38280 \item[\code{wait}] a logical (not \code {NA}) indicating whether the ... ! Undefined control sequence. l.38280 ...ot \code{NA}) indicating whether the \R {} ! Undefined control sequence. l.38283 always wait) if \code {stdout = TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38284 \item[\code{minimized, invisible}] arguments that are accepted on Wi... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38286 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38287 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38289 \begin{Details} \relax ! Undefined control sequence. l.38290 Unlike \code {\LinkA{system}{system}}, \code{command} is always quote... ! Undefined control sequence. l.38290 Unlike \code{\LinkA {system}{system}}, \code{command} is always quote... ! Undefined control sequence. l.38290 ...ke \code{\LinkA{system}{system}}, \code {command} is always quoted by ! Undefined control sequence. l.38291 \code {\LinkA{shQuote}{shQuote}}, so it must be a single command with... ! Undefined control sequence. l.38291 \code{\LinkA {shQuote}{shQuote}}, so it must be a single command with... ! Undefined control sequence. l.38293 For details of how \code {command} is found see \code{\LinkA{system}{... ! Undefined control sequence. l.38293 ...f how \code{command} is found see \code {\LinkA{system}{system}}. ! Undefined control sequence. l.38293 ...code{command} is found see \code{\LinkA {system}{system}}. ! Undefined control sequence. l.38295 On Windows, \code {env} is only supported for commands such as ! Undefined control sequence. l.38296 \command {R} and \command{make} which accept environment variables on ! Undefined control sequence. l.38296 \command{R} and \command {make} which accept environment variables on ! Undefined control sequence. l.38299 ... (such as some implementations of \code {ls}) change ! Undefined control sequence. l.38301 \code {stdout = TRUE} uses a pipe whereas \code{stdout = ! Undefined control sequence. l.38301 ...tdout = TRUE} uses a pipe whereas \code {stdout = ! Undefined control sequence. l.38304 ...t is implemented, on a Unix-alike \code {stderr = ! Undefined control sequence. l.38305 TRUE} implies \code {stdout = TRUE}: a warning is given if this is ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38307 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38309 \begin{Value} ! Undefined control sequence. l.38310 If \code {stdout = TRUE} or \code{stderr = TRUE}, a character vector ! Undefined control sequence. l.38310 If \code{stdout = TRUE} or \code {stderr = TRUE}, a character vector ! Undefined control sequence. l.38313 could not be run an \R {} error is generated. If \code{command} runs... ! Undefined control sequence. l.38313 ...n an \R{} error is generated. If \code {command} runs but ! Undefined control sequence. l.38315 in the attribute \code {"status"} of the result: an attribute ! Undefined control sequence. l.38316 \code {"errmsg"} may also be available. ! Undefined control sequence. l.38318 ...he return value is an error code (\code {0} ! Undefined control sequence. l.38319 for success), given the \LinkA {invisible}{invisible} attribute (so n... ! Undefined control sequence. l.38321 value is \code {127}. Otherwise if \code{wait = TRUE} the value is the ! Undefined control sequence. l.38321 value is \code{127}. Otherwise if \code {wait = TRUE} the value is the ! Undefined control sequence. l.38322 ...s returned by the command, and if \code {wait = FALSE} it is ! Undefined control sequence. l.38323 \code {0} (the conventional success value). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38324 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38326 \begin{Note} \relax ! Undefined control sequence. l.38327 \code {system2} is a more portable and flexible interface than ! Undefined control sequence. l.38328 \code {\LinkA{system}{system}}. It allows redirection of output with... ! Undefined control sequence. l.38328 \code{\LinkA {system}{system}}. It allows redirection of output with... ! Undefined control sequence. l.38330 variables for the execution of \code {command}, and finer control over ! Undefined control sequence. l.38331 the redirection of \code {stdout} and \code{stderr}. Conversely, ! Undefined control sequence. l.38331 the redirection of \code{stdout} and \code {stderr}. Conversely, ! Undefined control sequence. l.38332 \code {system} (and \code{shell} on Windows) allows the invocation of ! Undefined control sequence. l.38332 \code{system} (and \code {shell} on Windows) allows the invocation of ! Undefined control sequence. l.38335 There is no guarantee that if \code {stdout} and \code{stderr} are both ! Undefined control sequence. l.38335 ...arantee that if \code{stdout} and \code {stderr} are both ! Undefined control sequence. l.38336 \code {TRUE} or the same file that the two streams will be interleaved ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38339 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38341 \begin{SeeAlso} \relax ! Undefined control sequence. l.38342 \code {\LinkA{system}{system}}. ! Undefined control sequence. l.38342 \code{\LinkA {system}{system}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38343 \end{SeeAlso} ! Undefined control sequence. l.38344 \HeaderA {t}{Matrix Transpose}{t} ! Undefined control sequence. l.38345 \methaliasA {t.data.frame}{t}{t.data.frame} ! Undefined control sequence. l.38346 \methaliasA {t.default}{t}{t.default} ! Undefined control sequence. l.38347 \keyword {array}{t} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38349 \begin{Description} \relax ! Undefined control sequence. l.38350 Given a matrix or \code {\LinkA{data.frame}{data.frame}} \code{x}, ! Undefined control sequence. l.38350 Given a matrix or \code{\LinkA {data.frame}{data.frame}} \code{x}, ! Undefined control sequence. l.38350 ...e{\LinkA{data.frame}{data.frame}} \code {x}, ! Undefined control sequence. l.38351 \code {t} returns the transpose of \code{x}. ! Undefined control sequence. l.38351 \code{t} returns the transpose of \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38352 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38354 \begin{Usage} [371 [121]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38358 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38360 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38361 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38362 \item[\code{x}] a matrix or data frame, typically. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38363 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38364 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38366 \begin{Details} \relax ! Undefined control sequence. l.38368 ...n here applies to the default and \code {"data.frame"} methods. ! Undefined control sequence. l.38370 ...is first coerced to a matrix: see \code {\LinkA{as.matrix}{as.matr... ! Undefined control sequence. l.38370 ...t coerced to a matrix: see \code{\LinkA {as.matrix}{as.matrix}}. ! Undefined control sequence. l.38371 When \code {x} is a vector, it is treated as a column, i.e., the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38373 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38375 \begin{Value} ! Undefined control sequence. l.38376 A matrix, with \code {dim} and \code{dimnames} constructed ! Undefined control sequence. l.38376 A matrix, with \code{dim} and \code {dimnames} constructed ! Undefined control sequence. l.38377 appropriately from those of \code {x}, and other attributes except ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38379 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38381 \begin{Note} \relax ! Undefined control sequence. l.38382 ...ate} transpose of a complex matrix \eqn {A}{}, denoted ! Undefined control sequence. l.38383 \eqn {A^H}{} or \eqn{A^*}{}, is computed as \code{\LinkA{Conj}{Conj}(... ! Missing $ inserted. $ l.38383 \eqn{A^ H}{} or \eqn{A^*}{}, is computed as \code{\LinkA{Conj}{Conj}(... ! Extra }, or forgotten $. l.38383 \eqn{A^H} {} or \eqn{A^*}{}, is computed as \code{\LinkA{Conj}{Conj}(... ! Undefined control sequence. l.38383 \eqn{A^H}{} or \eqn {A^*}{}, is computed as \code{\LinkA{Conj}{Conj}(... ! Undefined control sequence. l.38383 ...{} or \eqn{A^*}{}, is computed as \code {\LinkA{Conj}{Conj}(t(A))}. ! Undefined control sequence. l.38383 ...eqn{A^*}{}, is computed as \code{\LinkA {Conj}{Conj}(t(A))}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38384 \end{Note} ! Missing $ inserted. $ l.38384 \end{Note} ! Missing } inserted. } l.38384 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38386 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38390 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38392 \begin{SeeAlso} \relax ! Undefined control sequence. l.38393 \code {\LinkA{aperm}{aperm}} for permuting the dimensions of arrays. ! Undefined control sequence. l.38393 \code{\LinkA {aperm}{aperm}} for permuting the dimensions of arrays. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38394 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38396 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38397 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38399 ta <- t(a) # #-- i.e., a[i, j] == ta[j, i] for all i,j : ! You can't use `macro parameter character #' in horizontal mode. l.38399 ta <- t(a) ## -- i.e., a[i, j] == ta[j, i] for all i,j : ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38402 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38403 \end{Examples} ! Undefined control sequence. l.38404 \HeaderA {table}{Cross Tabulation and Table Creation}{table} ! Undefined control sequence. l.38405 \aliasA {as.data.frame.table}{table}{as.data.frame.table} ! Undefined control sequence. l.38406 \aliasA {as.table}{table}{as.table} ! Undefined control sequence. l.38407 \methaliasA {as.table.default}{table}{as.table.default} ! Undefined control sequence. l.38408 \aliasA {is.table}{table}{is.table} ! Undefined control sequence. l.38409 \aliasA {print.summary.table}{table}{print.summary.table} ! Undefined control sequence. l.38410 \aliasA {summary.table}{table}{summary.table} ! Undefined control sequence. l.38411 \aliasA {[.table}{table}{[.table} ! Undefined control sequence. l.38412 \keyword {category}{table} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38414 \begin{Description} \relax ! Undefined control sequence. l.38415 \code {table} uses the cross-classifying factors to build a contingency ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38417 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38419 \begin{Usage} Underfull \hbox (badness 6658) in paragraph at lines 38370--38420 \OT1/cmr/m/n/10 tion and Ta-ble Cre-ationtable as.data.frame.tabletableas.data. frame.table Underfull \hbox (badness 10000) in paragraph at lines 38370--38420 \OT1/cmr/m/n/10 as.tabletableas.table as.table.defaulttableas.table.default Underfull \hbox (badness 10000) in paragraph at lines 38370--38420 \OT1/cmr/m/n/10 is.tabletableis.table print.summary.tabletableprint.summary.tab le sum- Underfull \hbox (badness 5637) in paragraph at lines 38370--38420 \OT1/cmr/m/n/10 mary.tabletablesummary.table [.tabletable[.table cat-e-go-ry-ta ble ta-ble uses ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38434 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38436 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38437 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a [95 missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38438 \item[\code{...}] one or more objects which can be interpreted as fa... ! Undefined control sequence. l.38440 ...ents can be so interpreted. (For \code {as.table}, arguments ! Undefined control sequence. l.38441 passed to specific methods; for \code {as.data.frame}, unused.) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38442 \item[\code{exclude}] levels to remove for all factors in \code{...}... ! Undefined control sequence. l.38442 ...vels to remove for all factors in \code {...}. If ! Undefined control sequence. l.38443 it does not contain \code {\LinkA{NA}{NA}} and \code{useNA} is not ! Undefined control sequence. l.38443 it does not contain \code{\LinkA {NA}{NA}} and \code{useNA} is not ! Undefined control sequence. l.38443 ...contain \code{\LinkA{NA}{NA}} and \code {useNA} is not ! Undefined control sequence. l.38444 specified, it implies \code {useNA = "ifany"}. See ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38446 \item[\code{useNA}] whether to include \code{NA} values in the table. ! Undefined control sequence. l.38446 ...[\code{useNA}] whether to include \code {NA} values in the table. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38448 \item[\code{dnn}] the names to be given to the dimensions in the res... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38450 \item[\code{deparse.level}] controls how the default \code{dnn} is ! Undefined control sequence. l.38450 ....level}] controls how the default \code {dnn} is ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38452 \item[\code{x}] an arbitrary \R{} object, or an object inheriting fr... ! Undefined control sequence. l.38452 \item[\code{x}] an arbitrary \R {} object, or an object inheriting fr... ! Undefined control sequence. l.38453 \code {"table"} for the \code{as.data.frame} method. Note that ! Undefined control sequence. l.38453 \code{"table"} for the \code {as.data.frame} method. Note that ! Undefined control sequence. l.38454 \code {as.data.frame.table(x, *)} may be called explicitly for ! Undefined control sequence. l.38455 non-table \code {x} for ``reshapin [122g'' \code{\LinkA{array}{array}}s. ! Undefined control sequence. l.38455 non-table \code{x} for ``reshaping'' \code {\LinkA{array}{array}}s. ! Undefined control sequence. l.38455 ...\code{x} for ``reshaping'' \code{\LinkA {array}{array}}s. [372]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38456 \item[\code{row.names}] a character vector giving the row names for ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38458 \item[\code{responseName}] The name to be used for the column of table ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38460 \item[\code{stringsAsFactors}] logical: should the classifying facto... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38462 \item[\code{sep, base}] passed to \code{\LinkA{provideDimnames}{prov... ! Undefined control sequence. l.38462 \item[\code{sep, base}] passed to \code {\LinkA{provideDimnames}{prov... ! Undefined control sequence. l.38462 ...code{sep, base}] passed to \code{\LinkA {provideDimnames}{provideD... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38463 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38464 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38466 \begin{Details} \relax ! Undefined control sequence. l.38467 If the argument \code {dnn} is not supplied, the internal function ! Undefined control sequence. l.38468 \code {list.names} is called to compute the `dimname names'. If the ! Undefined control sequence. l.38469 arguments in \code {...} are named, those names are used. For the ! Undefined control sequence. l.38470 remaining arguments, \code {deparse.level = 0} gives an empty name, ! Undefined control sequence. l.38471 \code {deparse.level = 1} uses the supplied argument if it is a symbol, ! Undefined control sequence. l.38472 and \code {deparse.level = 2} will deparse the argument. ! Undefined control sequence. l.38474 Only when \code {exclude} is specified (i.e., not by default) and ! Undefined control sequence. l.38475 non-empty, will \code {table} potentially drop levels of factor ! Undefined control sequence. l.38478 \code {useNA} controls if the table includes counts of \code{NA} ! Undefined control sequence. l.38478 ...s if the table includes counts of \code {NA} ! Undefined control sequence. l.38479 ...lowed values correspond to never (\code {"no"}), only if the count is ! Undefined control sequence. l.38480 positive (\code {"ifany"}) and even for zero counts (\code{"always"}). ! Undefined control sequence. l.38480 ...fany"}) and even for zero counts (\code {"always"}). ! Undefined control sequence. l.38482 \code {NA}s which are treated differently, depending on both ! Undefined control sequence. l.38483 \code {useNA} and \code{exclude}, see \code{d.patho} in the ! Undefined control sequence. l.38483 \code{useNA} and \code {exclude}, see \code{d.patho} in the ! Undefined control sequence. l.38483 \code{useNA} and \code{exclude}, see \code {d.patho} in the ! Undefined control sequence. l.38486 Both \code {exclude} and \code{useNA} operate on an ``all or none'' ! Undefined control sequence. l.38486 Both \code{exclude} and \code {useNA} operate on an ``all or none'' ! Undefined control sequence. l.38488 ...ately, modify each argument using \code {\LinkA{factor}{factor}} or ! Undefined control sequence. l.38488 ...modify each argument using \code{\LinkA {factor}{factor}} or ! Undefined control sequence. l.38489 \code {\LinkA{addNA}{addNA}}. ! Undefined control sequence. l.38489 \code{\LinkA {addNA}{addNA}}. ! Undefined control sequence. l.38491 Non-factor arguments \code {a} are coerced via \code{factor(a, ! Undefined control sequence. l.38491 ...rguments \code{a} are coerced via \code {factor(a, ! Undefined control sequence. l.38492 exclude=exclude)}. Since \R {} 3.4.0, care is taken \emph{not} to ! Undefined control sequence. l.38493 ... (where they were included in the \code {NA} ! Undefined control sequence. l.38496 The \code {summary} method for class \code{"table"} (used for objects ! Undefined control sequence. l.38496 The \code{summary} method for class \code {"table"} (used for objects ! Undefined control sequence. l.38497 created by \code {table} or \code{\LinkA{xtabs}{xtabs}}) which gives ... ! Undefined control sequence. l.38497 created by \code{table} or \code {\LinkA{xtabs}{xtabs}}) which gives ... ! Undefined control sequence. l.38497 created by \code{table} or \code{\LinkA {xtabs}{xtabs}}) which gives ... ! Undefined control sequence. l.38499 factors (note that the function \code {\LinkA{chisq.test}{chisq.test}... ! Undefined control sequence. l.38499 ...rs (note that the function \code{\LinkA {chisq.test}{chisq.test}} ... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38501 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38503 \begin{Value} ! Undefined control sequence. l.38504 \code {table()} returns a \emph{contingency table}, an object of ! Undefined control sequence. l.38505 class \code {"table"}, an array of integer values. ! Undefined control sequence. l.38506 ... unlike S the result is always an \code {\LinkA{array}{array}}, a 1D ! Undefined control sequence. l.38506 ... S the result is always an \code{\LinkA {array}{array}}, a 1D ! Undefined control sequence. l.38509 \code {as.table} and \code{is.table} coerce to and test for contingency ! Undefined control sequence. l.38509 \code{as.table} and \code {is.table} coerce to and test for contingency ! Undefined control sequence. l.38512 The \code {as.data.frame} method for objects inheriting from class ! Undefined control sequence. l.38513 \code {"table"} can be used to convert the array-based representation ! Undefined control sequence. l.38516 named by \code {responseName}). This is the inverse of \code{\LinkA{... ! Undefined control sequence. l.38516 ...seName}). This is the inverse of \code {\LinkA{xtabs}{xtabs}}. ! Undefined control sequence. l.38516 ...). This is the inverse of \code{\LinkA {xtabs}{xtabs}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38517 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38519 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38523 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38525 \begin{SeeAlso} \relax ! Undefined control sequence. l.38526 \code {\LinkA{tabulate}{tabulate}} is the underlying function and all... ! Undefined control sequence. l.38526 \code{\LinkA {tabulate}{tabulate}} is the underlying function and all... ! Undefined control sequence. l.38529 Use \code {\LinkA{ftable}{ftable}} for printing (and more) of ! Undefined control sequence. l.38529 Use \code{\LinkA {ftable}{ftable}} for printing (and more) of ! Undefined control sequence. l.38530 multidimensional tables. \code {\LinkA{margin.table}{margin.table}}, ! Undefined control sequence. l.38530 multidimensional tables. \code{\LinkA {margin.table}{margin.table}}, ! Undefined control sequence. l.38531 \code {\LinkA{prop.table}{prop.table}}, \code{\LinkA{addmargins}{addm... ! Undefined control sequence. l.38531 \code{\LinkA {prop.table}{prop.table}}, \code{\LinkA{addmargins}{addm... ! Undefined control sequence. l.38531 ...{\LinkA{prop.table}{prop.table}}, \code {\LinkA{addmargins}{addmar... ! Undefined control sequence. l.38531 ...{prop.table}{prop.table}}, \code{\LinkA {addmargins}{addmargins}}. ! Undefined control sequence. l.38533 \code {\LinkA{addNA}{addNA}} for constructing factors with \code{\Lin... ! Undefined control sequence. l.38533 \code{\LinkA {addNA}{addNA}} for constructing factors with \code{\Lin... ! Undefined control sequence. l.38533 ...A}} for constructing factors with \code {\LinkA{NA}{NA}} as ! Undefined control sequence. l.38533 ... constructing factors with \code{\LinkA {NA}{NA}} as ! Undefined control sequence. l.38536 \code {\LinkA{xtabs}{xtabs}} for cross tabulation of data frames with a ! Undefined control sequence. l.38536 \code{\LinkA {xtabs}{xtabs}} for cross tabulation of data frames with a ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38538 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38540 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38541 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38542 require(stats) # for rpois and xtabs ! You can't use `macro parameter character #' in horizontal mode. l.38543 # # Simple frequency distribution ! You can't use `macro parameter character #' in horizontal mode. l.38543 ## Simple frequency distribution ! You can't use `macro parameter character #' in horizontal mode. l.38545 # # Check the design: ! You can't use `macro parameter character #' in horizontal mode. l.38545 ## Check the design: ! You can't use `macro parameter character #' in vertical mode. l.38549 # simple two-way contingency table [373 [123]]] ! You can't use `macro parameter character #' in horizontal mode. l.38553 table(a, sample(a)) # dnn is c("a", "") ! You can't use `macro parameter character #' in horizontal mode. l.38554 table(a, sample(a), deparse.level = 0) # dnn is c("", "") ! You can't use `macro parameter character #' in horizontal mode. l.38555 table(a, sample(a), deparse.level = 2) # dnn is c("a", "sample(a)") ! You can't use `macro parameter character #' in vertical mode. l.38557 # # xtabs() <-> as.data.frame.table() : ! You can't use `macro parameter character #' in vertical mode. l.38557 ## xtabs() <-> as.data.frame.table() : ! You can't use `macro parameter character #' in horizontal mode. l.38558 UCBAdmissions # # already a contingency table ! You can't use `macro parameter character #' in horizontal mode. l.38558 UCBAdmissions ## already a contingency table ! You can't use `macro parameter character #' in horizontal mode. l.38560 class(tab <- xtabs(Freq ~ ., DF)) # xtabs & table ! Misplaced alignment tab character &. l.38560 ...s(tab <- xtabs(Freq ~ ., DF)) # xtabs & table ! You can't use `macro parameter character #' in horizontal mode. l.38561 # # tab *is* "the same" as the original table: ! You can't use `macro parameter character #' in horizontal mode. l.38561 ## tab *is* "the same" as the original table: ! You can't use `macro parameter character #' in horizontal mode. l.38566 table(a) # does not report NA's ! You can't use `macro parameter character #' in horizontal mode. l.38567 table(a, exclude = NULL) # reports NA's ! You can't use `macro parameter character #' in vertical mode. l.38575 # # NA counting: ! You can't use `macro parameter character #' in vertical mode. l.38575 ## NA counting: ! You can't use `macro parameter character #' in horizontal mode. l.38579 table(d.) # ", exclude = NULL" is not needed ! You can't use `macro parameter character #' in horizontal mode. l.38580 # # i.e., if you want to count the NA's of 'd', use ! You can't use `macro parameter character #' in horizontal mode. l.38580 ## i.e., if you want to count the NA's of 'd', use ! You can't use `macro parameter character #' in vertical mode. l.38583 # # "pathological" case: ! You can't use `macro parameter character #' in vertical mode. l.38583 ## "pathological" case: ! You can't use `macro parameter character #' in horizontal mode. l.38586 # # just 3 consecutive NA's ? --- well, have *two* kinds of NAs here : ! You can't use `macro parameter character #' in horizontal mode. l.38586 ## just 3 consecutive NA's ? --- well, have *two* kinds of NAs here : ! You can't use `macro parameter character #' in horizontal mode. l.38587 as.integer(d.patho) # 1 4 NA NA 1 2 ! You can't use `macro parameter character #' in horizontal mode. l.38588 # # ! You can't use `macro parameter character #' in horizontal mode. l.38588 ## ! You can't use `macro parameter character #' in horizontal mode. l.38589 # # In R >= 3.4.0, table() allows to differentiate: ! You can't use `macro parameter character #' in horizontal mode. l.38589 ## In R >= 3.4.0, table() allows to differentiate: ! You can't use `macro parameter character #' in horizontal mode. l.38590 table(d.patho) # counts the "unusual" NA ! You can't use `macro parameter character #' in horizontal mode. l.38591 table(d.patho, useNA = "ifany") # counts all three ! You can't use `macro parameter character #' in horizontal mode. l.38592 table(d.patho, exclude = NULL) # (ditto) ! You can't use `macro parameter character #' in horizontal mode. l.38593 table(d.patho, exclude = NA) # counts none ! You can't use `macro parameter character #' in vertical mode. l.38595 # # Two-way tables with NA counts. The 3rd variant is absurd, but shows ! You can't use `macro parameter character #' in vertical mode. l.38595 ## Two-way tables with NA counts. The 3rd variant is absurd, but shows ! You can't use `macro parameter character #' in horizontal mode. l.38596 # # something that cannot be done using exclude or useNA. ! You can't use `macro parameter character #' in horizontal mode. l.38596 ## something that cannot be done using exclude or useNA. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38603 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38604 \end{Examples} ! Undefined control sequence. l.38605 \HeaderA {tabulate}{Tabulation for Vectors}{tabulate} ! Undefined control sequence. l.38606 \keyword {arith}{tabulate} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38608 \begin{Description} \relax ! Undefined control sequence. l.38609 \code {tabulate} takes the integer-valued vector \code{bin} and counts ! Undefined control sequence. l.38609 ...} takes the integer-valued vector \code {bin} and counts ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38611 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38613 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38617 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38619 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38620 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38621 \item[\code{bin}] a numeric vector (of positive integers), or a factor. ! Undefined control sequence. l.38622 \LinkA {Long vectors}{Long vectors} are supported. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38623 \item[\code{nbins}] the number of bins to be used. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38624 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38625 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38627 \begin{Details} \relax ! Undefined control sequence. l.38628 \code {tabulate} is the workhorse for the \code{\LinkA{table}{table}}... ! Undefined control sequence. l.38628 ...abulate} is the workhorse for the \code {\LinkA{table}{table}} fun... ! Undefined control sequence. l.38628 ...} is the workhorse for the \code{\LinkA {table}{table}} function. ! Undefined control sequence. l.38630 If \code {bin} is a factor, its internal integer representation ! Undefined control sequence. l.38633 If the elements of \code {bin} are numeric but not integers, ! Undefined control sequence. l.38634 they are truncated by \code {\LinkA{as.integer}{as.integer}}. ! Undefined control sequence. l.38634 they are truncated by \code{\LinkA {as.integer}{as.integer}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38635 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38637 \begin{Value} ! Undefined control sequence. l.38638 An integer valued \code {\LinkA{integer}{integer}} or \code{\LinkA{do... ! Undefined control sequence. l.38638 An integer valued \code{\LinkA {integer}{integer}} or \code{\LinkA{do... ! Undefined control sequence. l.38638 ...code{\LinkA{integer}{integer}} or \code {\LinkA{double}{double}} v... ! Undefined control sequence. l.38638 ...inkA{integer}{integer}} or \code{\LinkA {double}{double}} vector ! Undefined control sequence. l.38639 ...e is a bin for each of the values \code {1, ! Undefined control sequence. l.38640 ...s}; values outside that range and \code {NA}s are (silently) ! Undefined control sequence. l.38643 On 64-bit platforms \code {bin} can have \eqn{2^{31}}{} or more ! Undefined control sequence. l.38643 ...-bit platforms \code{bin} can have \eqn {2^{31}}{} or more ! Missing $ inserted. $ l.38643 ...t platforms \code{bin} can have \eqn{2^ {31}}{} or more ! Extra }, or forgotten $. l.38643 ...tforms \code{bin} can have \eqn{2^{31}} {} or more ! Undefined control sequence. l.38644 elements (i.e., \code {length(bin) > .Machine\$integer.max}), and hence ! Undefined control sequence. l.38646 ...e is of type double for such long \code {bin} vectors. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38647 \end{Value} ! Missing $ inserted. $ l.38647 \end{Value} ! Missing } inserted. } l.38647 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38649 \begin{SeeAlso} \relax ! Undefined control sequence. l.38650 \code {\LinkA{table}{table}}, \code{\LinkA{factor}{factor}}. ! Undefined control sequence. l.38650 \code{\LinkA {table}{table}}, \code{\LinkA{factor}{factor}}. ! Undefined control sequence. l.38650 \code{\LinkA{table}{table}}, \code {\LinkA{factor}{factor}}. ! Undefined control sequence. l.38650 \code{\LinkA{table}{table}}, \code{\LinkA {factor}{factor}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38651 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38653 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38654 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38657 tabulate(c(-2,0,2,3,3,5)) # -2 and 0 are ignored ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38660 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38661 \end{Examples} ! Undefined control sequence. l.38662 \HeaderA {tapply}{Apply a Function Over a Ragged Array}{tapply} ! Undefined control sequence. l.38663 \keyword {iteration}{tapply} ! Undefined control sequence. l.38664 \keyword {category}{tapply} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ) [124 l.38666 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38670 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38672 \begin{Usage} Overfull \hbox (620.47943pt too wide) in paragraph at lines 38643--38673 []\OT1/cmr/m/n/10 On 64-bit plat-forms bin can have 2$[][]\OML/cmm/m/it/10 ormo reelements\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 i:e:; []\OT1/cmr/m/n/10 )\OML/cmm/m /it/10 ; andhenceacountcouldexceedthemaximuminteger:Forthisreason; thereturnval ueisoftypedoubleforsuchlong[]vectors:$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38676 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38678 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38679 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38680 \item[\code{X}] an atomic object, typically a vector. [374 Appendix E [96]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38681 \item[\code{INDEX}] a \code{\LinkA{list}{list}} of one or more \code... ! Undefined control sequence. l.38681 \item[\code{INDEX}] a \code {\LinkA{list}{list}} of one or more \code... ! Undefined control sequence. l.38681 \item[\code{INDEX}] a \code{\LinkA {list}{list}} of one or more \code... ! Undefined control sequence. l.38681 ...LinkA{list}{list}} of one or more \code {\LinkA{factor}{factor}}s, ! Undefined control sequence. l.38681 ...ist}{list}} of one or more \code{\LinkA {factor}{factor}}s, ! Undefined control sequence. l.38682 each of same length as \code {X}. The elements are coerced to ! Undefined control sequence. l.38683 factors by \code {\LinkA{as.factor}{as.factor}}. ! Undefined control sequence. l.38683 factors by \code{\LinkA {as.factor}{as.factor}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38684 \item[\code{FUN}] the function to be applied, or \code{NULL}. In th... ! Undefined control sequence. l.38684 ...}] the function to be applied, or \code {NULL}. In the case of ! Undefined control sequence. l.38685 functions like \code {+}, \code{\%*\%}, etc., the function name must ! Undefined control sequence. l.38685 functions like \code{+}, \code {\%*\%}, etc., the function name must ! Undefined control sequence. l.38686 be backquoted or quoted. If \code {FUN} is \code{NULL}, tapply ! Undefined control sequence. l.38686 ...oted or quoted. If \code{FUN} is \code {NULL}, tapply ! Undefined control sequence. l.38688 \code {tapply} normally produces. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38689 \item[\code{...}] optional arguments to \code{FUN}: the Note section. ! Undefined control sequence. l.38689 ...\code{...}] optional arguments to \code {FUN}: the Note section. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38690 \item[\code{default}] (only in the case of simplification to an arra... ! Undefined control sequence. l.38692 \code {\LinkA{array}{array}(default, dim = ..)}. Before \R{} 3.4.0, ... ! Undefined control sequence. l.38692 \code{\LinkA {array}{array}(default, dim = ..)}. Before \R{} 3.4.0, ... ! Undefined control sequence. l.38692 ...{array}(default, dim = ..)}. Before \R {} 3.4.0, this ! Undefined control sequence. l.38693 was hard coded to \code {\LinkA{array}{array}()}'s default \code{NA}.... ! Undefined control sequence. l.38693 was hard coded to \code{\LinkA {array}{array}()}'s default \code{NA}.... ! Undefined control sequence. l.38693 ...\LinkA{array}{array}()}'s default \code {NA}. If it ! Undefined control sequence. l.38694 is \code {NA} (the default), the missing value of the answer type, ! Undefined control sequence. l.38695 e.g. \code {\LinkA{NA\_real\_}{NA.Rul.real.Rul.}}, is chosen (\code{\... ! Undefined control sequence. l.38695 e.g. \code{\LinkA {NA\_real\_}{NA.Rul.real.Rul.}}, is chosen (\code{\... ! Undefined control sequence. l.38695 ..._}{NA.Rul.real.Rul.}}, is chosen (\code {\LinkA{as.raw}{as.raw}(0)... ! Undefined control sequence. l.38695 ...ul.real.Rul.}}, is chosen (\code{\LinkA {as.raw}{as.raw}(0)} for ! Undefined control sequence. l.38696 \code {"raw"}). In a numerical case, it may be set, e.g., to ! Undefined control sequence. l.38697 \code {FUN(integer(0))}, e.g., in the case of \code{FUN = sum} to ! Undefined control sequence. l.38697 ...nteger(0))}, e.g., in the case of \code {FUN = sum} to ! Undefined control sequence. l.38698 \code {0} or \code{0L}. ! Undefined control sequence. l.38698 \code{0} or \code {0L}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38699 \item[\code{simplify}] logical; if \code{FALSE}, \code{tapply} alway... ! Undefined control sequence. l.38699 \item[\code{simplify}] logical; if \code {FALSE}, \code{tapply} alway... ! Undefined control sequence. l.38699 ...plify}] logical; if \code{FALSE}, \code {tapply} always returns ! Undefined control sequence. l.38700 an array of mode \code {"list"}; in other words, a \code{\LinkA{list}... ! Undefined control sequence. l.38700 ... \code{"list"}; in other words, a \code {\LinkA{list}{list}} ! Undefined control sequence. l.38700 ..."list"}; in other words, a \code{\LinkA {list}{list}} ! Undefined control sequence. l.38701 with a \code {\LinkA{dim}{dim}} attribute. If \code{TRUE} (the defau... ! Undefined control sequence. l.38701 with a \code{\LinkA {dim}{dim}} attribute. If \code{TRUE} (the defau... ! Undefined control sequence. l.38701 ...{\LinkA{dim}{dim}} attribute. If \code {TRUE} (the default), then if ! Undefined control sequence. l.38702 \code {FUN} always returns a scalar, \code{tapply} returns an array ! Undefined control sequence. l.38702 \code{FUN} always returns a scalar, \code {tapply} returns an array ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38704 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38705 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [125] l.38707 \begin{Value} ! Undefined control sequence. l.38708 If \code {FUN} is not \code{NULL}, it is passed to ! Undefined control sequence. l.38708 If \code{FUN} is not \code {NULL}, it is passed to ! Undefined control sequence. l.38709 \code {\LinkA{match.fun}{match.fun}}, and hence it can be a function ... ! Undefined control sequence. l.38709 \code{\LinkA {match.fun}{match.fun}}, and hence it can be a function ... ! Undefined control sequence. l.38712 When \code {FUN} is present, \code{tapply} calls \code{FUN} for each ! Undefined control sequence. l.38712 When \code{FUN} is present, \code {tapply} calls \code{FUN} for each ! Undefined control sequence. l.38712 ...} is present, \code{tapply} calls \code {FUN} for each ! Undefined control sequence. l.38713 cell that has any data in it. If \code {FUN} returns a single atomic ! Undefined control sequence. l.38714 ...r each such cell (e.g., functions \code {mean} or \code{var}) ! Undefined control sequence. l.38714 ...l (e.g., functions \code{mean} or \code {var}) ! Undefined control sequence. l.38715 and when \code {simplify} is \code{TRUE}, \code{tapply} returns a ! Undefined control sequence. l.38715 and when \code{simplify} is \code {TRUE}, \code{tapply} returns a ! Undefined control sequence. l.38715 ...n \code{simplify} is \code{TRUE}, \code {tapply} returns a ! Undefined control sequence. l.38716 multi-way \LinkA {array}{array} containing the values, and \code{NA} ... ! Undefined control sequence. l.38716 ...array} containing the values, and \code {NA} for the ! Undefined control sequence. l.38718 \code {INDEX} has components; the number of levels in a dimension is ! Undefined control sequence. l.38719 the number of levels (\code {nlevels()}) in the corresponding component ! Undefined control sequence. l.38720 of \code {INDEX}. Note that if the return value has a class (e.g., an ! Undefined control sequence. l.38721 object of class \code {"\LinkA{Date}{Date}"}) the class is discarded. ! Undefined control sequence. l.38721 object of class \code{"\LinkA {Date}{Date}"}) the class is discarded. ! Undefined control sequence. l.38723 Note that contrary to S, \code {simplify = TRUE} always returns an ! Undefined control sequence. l.38726 If \code {FUN} does not return a single atomic value, \code{tapply} ! Undefined control sequence. l.38726 ...not return a single atomic value, \code {tapply} ! Undefined control sequence. l.38727 returns an array of mode \code {\LinkA{list}{list}} whose components ... ! Undefined control sequence. l.38727 returns an array of mode \code{\LinkA {list}{list}} whose components ... ! Undefined control sequence. l.38728 values of the individual calls to \code {FUN}, i.e., the result is a ! Undefined control sequence. l.38729 list with a \code {\LinkA{dim}{dim}} attribute. ! Undefined control sequence. l.38729 list with a \code{\LinkA {dim}{dim}} attribute. ! Undefined control sequence. l.38731 When there is an array answer, its \code {\LinkA{dimnames}{dimnames}}... ! Undefined control sequence. l.38731 ...re is an arr (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.cpsay answer, its \code{\LinkA {dimnames}{dimnames}} are ... ! Undefined control sequence. l.38732 the names of \code {INDEX} and are based on the levels of the grouping ! Undefined control sequence. l.38736 \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38737 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38739 \begin{Note} \relax ! Undefined control sequence. l.38740 Optional arguments to \code {FUN} supplied by the \code{...} argument ! Undefined control sequence. l.38740 ...nts to \code{FUN} supplied by the \code {...} argument ! Undefined control sequence. l.38742 \code {FUN} to expect additional arguments with the same length as ! Undefined control sequence. l.38743 \code {X}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38744 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38746 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38750 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38752 \begin{SeeAlso} \relax ! Undefined control sequence. l.38753 the convenience functions \code {\LinkA{by}{by}} and ! Undefined control sequence. l.38753 the convenience functions \code{\LinkA {by}{by}} and ! Undefined control sequence. l.38754 \code {\LinkA{aggregate}{aggregate}} (using \code{tapply}); ! Undefined control sequence. l.38754 \code{\LinkA {aggregate}{aggregate}} (using \code{tapply}); ! Undefined control sequence. l.38754 ...nkA{aggregate}{aggregate}} (using \code {tapply}); ! Undefined control sequence. l.38755 \code {\LinkA{apply}{apply}}, ! Undefined control sequence. l.38755 \code{\LinkA {apply}{apply}}, ! Undefined control sequence. l.38756 \code {\LinkA{lapply}{lapply}} with its versions ! Undefined control sequence. l.38756 \code{\LinkA {lapply}{lapply}} with its versions ! Undefined control sequence. l.38757 \code {\LinkA{sapply}{sapply}} and \code{\LinkA{mapply}{mapply}}. ! Undefined control sequence. l.38757 \code{\LinkA {sapply}{sapply}} and \code{\LinkA{mapply}{mapply}}. ! Undefined control sequence. l.38757 \code{\LinkA{sapply}{sapply}} and \code {\LinkA{mapply}{mapply}}. ! Undefined control sequence. l.38757 ...LinkA{sapply}{sapply}} and \code{\LinkA ] {mapply}{mapply}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38758 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38760 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38761 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.38764 tapply(groups, groups, length) # - is almost the same as ! You can't use `macro parameter character #' in vertical mode. l.38767 # # contingency table from data.frame : array with named dimnames ! You can't use `macro parameter character #' in vertical mode. l.38767 ## contingency table from data.frame : array with named dimnames Underfull \hbox (badness 2469) in paragraph at lines 38767--38770 []\OT1/cmr/m/n/10 contingency ta-ble from data.frame : ar-ray with named dim-na mes Underfull \hbox (badness 10000) in paragraph at lines 38767--38770 \OT1/cmr/m/n/10 tapply(warpbreaks$\OML/cmm/m/it/10 breaks; warpbreaks\OT1/cmr/m /n/10 [\OML/cmm/m/it/10 ; \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 1]\OML/cmm/m/it/1 0 ; sum\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 tapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/1 0 warpbreaks$\OT1/cmr/m/n/10 breaks, ! Missing $ inserted. $ l.38771 n <- 17; fac <- factor(rep_ len(1:3, n), levels = 1:5) ! You can't use `macro parameter character #' in math mode. l.38774 tapply(1:n, fac, sum, default = 0) # maybe more desirable ! You can't use `macro parameter character #' in math mode. l.38778 tapply(1:n, fac, length) # # NA's ! You can't use `macro parameter character #' in math mode. l.38778 tapply(1:n, fac, length) ## NA's ! You can't use `macro parameter character #' in math mode. l.38779 tapply(1:n, fac, length, default = 0) # == table(fac) ! Missing $ inserted. $ l.38780 Underfull \hbox (badness 4765) in paragraph at lines 38771--38780 \OML/cmm/m/it/10 n; fac; sum; simplify \OT1/cmr/m/n/10 = \OML/cmm/m/it/10 FALSE \OT1/cmr/m/n/10 )\OML/cmm/m/it/10 tapply\OT1/cmr/m/n/10 (1 : \OML/cmm/m/it/10 n ; fac; range\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 tapply\OT1/cmr/m/n/10 (1 : Underfull \hbox (badness 10000) in paragraph at lines 38771--38780 \OML/cmm/m/it/10 n; fac; quantile\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 tapply\OT1/c mr/m/n/10 (1 : \OML/cmm/m/it/10 n; fac; length\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 NA[]stapply\OT1/cmr/m/n/10 (1 : [375 [126]] ! You can't use `macro parameter character #' in vertical mode. l.38781 # # example of ... argument: find quarterly means ! You can't use `macro parameter character #' in vertical mode. l.38781 ## example of ... argument: find quarterly means ! You can't use `macro parameter character #' in horizontal mode. l.38786 tapply(1:3, ind) # -> the split vector ! You can't use `macro parameter character #' in vertical mode. l.38789 # # Some assertions (not held by all patch propsals): ! You can't use `macro parameter character #' in vertical mode. l.38789 ## Some assertions (not held by all patch propsals): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38799 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38800 \end{Examples} ! Undefined control sequence. l.38801 \HeaderA {taskCallback}{Add or Remove a Top-Level Task Callback}{task... ! Undefined control sequence. l.38802 \aliasA {addTaskCallback}{taskCallback}{addTaskCallback} ! Undefined control sequence. l.38803 \aliasA {removeTaskCallback}{taskCallback}{removeTaskCallback} ! Undefined control sequence. l.38804 \keyword {environment}{taskCallback} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38806 \begin{Description} \relax ! Undefined control sequence. l.38807 \code {addTaskCallback} registers an R function Underfull \hbox (badness 1320) in paragraph at lines 38789--38810 \OT1/cmr/m/n/10 taskCall-back-Add or Re-move a Top-Level Task Call-back-taskCal l-back ad- ! Undefined control sequence. l.38811 \code {removeTaskCallback} un-registers a function ! Undefined control sequence. l.38812 that was registered earlier via \code {addTaskCallback}. ! Undefined control sequence. l.38816 One can use \code {\LinkA{taskCallbackManager}{taskCallbackManager}} ! Undefined control sequence. l.38816 One can use \code{\LinkA {taskCallbackManager}{taskCallbackManager}} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38820 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38822 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38827 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38829 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38830 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38831 \item[\code{f}] the function that is to be invoked each time a top-l... ! Undefined control sequence. l.38833 depending on whether \code {data} is specified or not, respectively. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38836 \item[\code{data}] if specified, this is the 5-th argument in the ca... ! Undefined control sequence. l.38837 callback function \code {f}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38838 \item[\code{id}] a string or an integer identifying the element in the ! Undefined control sequence. l.38842 using \code {\LinkA{getTaskCallbackNames}{getTaskCallbackNames}} ! Undefined control sequence. l.38842 using \code{\LinkA {getTaskCallbackNames}{getTaskCallbackNames}} ! Undefined control sequence. l.38843 and is also returned in a call to \code {\LinkA{addTaskCallback}{addT... ! Undefined control sequence. l.38843 ...also returned in a call to \code{\LinkA {addTaskCallback}{addTaskC... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38845 \item[\code{name}] character: names to be used. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38846 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38847 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38849 \begin{Details} \relax ! Undefined control sequence. l.38852 line of the form \code {expression1 ; expression2} ! Undefined control sequence. l.38859 printed or not. If the \code {data} argument was specified in the call ! Undefined control sequence. l.38860 to \code {addTaskCallback}, that value is given as the fifth argument. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38867 \end{Details} ! LaT [127eX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38869 \begin{Value} ! Undefined control sequence. l.38870 \code {addTaskCallback} returns [376 [97]] ! Undefined control sequence. l.38878 \code {removeTaskCallback} returns a logical value ! Undefined control sequence. l.38880 This can fail (i.e., return \code {FALSE}) ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38883 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38885 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38888 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38890 \begin{SeeAlso} \relax ! Undefined control sequence. l.38891 \code {\LinkA{getTaskCallbackNames}{getTaskCallbackNames}} ! Undefined control sequence. l.38891 \code{\LinkA {getTaskCallbackNames}{getTaskCallbackNames}} ! Undefined control sequence. l.38892 \code {\LinkA{taskCallbackManager}{taskCallbackManager}} ! Undefined control sequence. l.38892 \code{\LinkA {taskCallbackManager}{taskCallbackManager}} ! Undefined control sequence. l.38893 \url {https://developer.r-project.org/TaskHandlers.pdf} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38894 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38896 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38897 \begin{ExampleCode} ! Undefined control sequence. l.38902 cat(str, ctr, "\n ") ! Undefined control sequence. l.38905 cat("handler removing itself\n ") ! You can't use `macro parameter character #' in vertical mode. l.38907 # return ! You can't use `macro parameter character #' in vertical mode. l.38912 # add the callback that will work for ! You can't use `macro parameter character #' in horizontal mode. l.38913 # 4 top-level tasks and then remove itself. ! You can't use `macro parameter character #' in vertical mode. l.38916 # now remove it, assuming it is still first in the list. ! You can't use `macro parameter character #' in vertical mode. l.38919 # # See how the handler is called every time till "self destruction": ! You can't use `macro parameter character #' in vertical mode. l.38919 ## See how the handler is called every time till "self destruction": ! You can't use `macro parameter character #' in horizontal mode. l.38921 addTaskCallback(times(4)) # counts as once already ! You can't use `macro parameter character #' in horizontal mode. l.38923 sum(1]:10) ; mean(1:3) # two more ! You can't use `macro parameter character #' in horizontal mode. l.38924 sinpi(1) # 4th - and "done" ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38927 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38928 \end{Examples} ! Undefined control sequence. l.38929 \HeaderA {taskCallbackManager}{Create an R-level Task Callback Manage... ! Undefined control sequence. l.38930 \keyword {environment}{taskCallbackManager} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38932 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38942 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38944 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38949 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38951 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38952 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38953 \item[\code{handlers}] this can be a list of callbacks in which each... ! Undefined control sequence. l.38954 is a list with an element named \code {"f"} ! Undefined control sequence. l.38956 element named \code {"data"} which is the 5-th argument to be ! Undefined control sequence. l.38958 ...nt is not specified, and one uses \code {add} to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38960 \item[\code{registered}] a logical value indicating whether ! Undefined control sequence. l.38961 the \code {evaluate} function has already been Underfull \hbox (badness 2781) in paragraph at lines 11080--11082 [][][]@smallrm You can as-sign a @smallit copy @smallrm of the ob-ject in the e n-vi-ron-ment frame @smalltt rho[] @smallrm us-ing @smalltt defineVar(symbol, [128) Appendix F [98registered ! Undefined control sequence. l.38963 This is usually \code {FALSE} and ! Undefined control sequence. l.38965 via the \code {add} function, the ! Undefined control sequence. l.38966 \code {evaluate} function is automatically registered. ! Undefined control sequence. l.38968 by specifying \code {TRUE} for this argument ! Undefined control sequence. l.38969 and calling \code {\LinkA{addTaskCallback}{addTaskCallback}} manually. ! Undefined control sequence. l.38969 and calling \code{\LinkA {addTaskCallback}{addTaskCallback}} manually. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38971 \item[\code{verbose}] a logical value, which if \code{TRUE}, ! Undefined control sequence. l.38971 ...rbose}] a logical value, which if \code {TRUE}, ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38977 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38978 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38980 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38982 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38983 \item[\code{add}] register a callback with this manager, giving the ! Undefined control sequence. l.38986 and a \code {register} argument which controls whether ! Undefined control sequence. l.38987 the \code {evaluate} function is registered with the internal [377]] [99]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38989 \item[\code{remove}] remove an element from the manager's collection ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38991 \item[\code{evaluate}] the `real' callback function that is registered ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38994 \item[\code{suspend}] a function to set the suspend state ! Undefined control sequence. l.38997 a logical value for the \code {status} argument. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.38999 \item[\code{register}] a function to register the \code{evaluate} ! Undefined control sequence. l.38999 ...ster}] a function to register the \code {evaluate} ! Undefined control sequence. l.39001 done automatically by the \code {add} function, but can be called ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39003 \item[\code{callbacks}] returns the list of callbacks being maintain... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39005 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39006 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39008 \begin{SeeAlso} \relax ! Undefined control sequence. l.39009 \code {\LinkA{addTaskCallback}{addTaskCallback}}, ! Undefined control sequence. l.39009 \code{\LinkA {addTaskCallback}{addTaskCallback}}, ! Undefined control sequence. l.39010 \code {\LinkA{removeTaskCallback}{removeTaskCallback}}, ! Undefined control sequence. l.39010 \code{\LinkA {removeTaskCallback}{removeTaskCallback}}, ! Undefined control sequence. l.39011 \code {\LinkA{getTaskCallbackNames}{getTaskCallbackNames}}\bsl{} ! Undefined control sequence. l.39011 \code{\LinkA {getTaskCallbackNames}{getTaskCallbackNames}}\bsl{} ! Undefined control sequence. l.39011 ...llbackNames}{getTaskCallbackNames}}\bsl {} ! Undefined control sequence. l.39012 \url {https://developer.r-project.org/TaskHandlers.pdf} ! LaTeX Error: \begi ) (see the transcript file for additional information) for immediate help. ... l.39013 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39015 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39016 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.39017 # create the manager Underfull \hbox (badness 10000) in paragraph at lines 39003--39019 \OT1/cmr/m/n/10 dTaskCall-back-ad-dTaskCall-back, re-move-TaskCall-back-re-move -TaskCall- Underfull \hbox (badness 10000) in paragraph at lines 39003--39019 \OT1/cmr/m/n/10 back, get-TaskCall-back-Names-get-TaskCall-back-Names https://d eveloper.r- ! You can't use `macro parameter character #' in vertical mode. l.39020 # add a callback ! Undefined control sequence. l.39022 cat("In handler\n ") ! Missing $ inserted. $ l.39025 Overfull \hbox (86.85257pt too wide) in paragraph at lines 39020--39025 []\OT1/cmr/m/n/10 add a call-back h$\OML/cmm/m/it/10 add\OT1/cmr/m/n/10 (\OML/c mm/m/it/10 function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 expr; value; ok; visible\O T1/cmr/m/n/10 )[]\OML/cmm/m/it/10 ; name \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.39026 # look at the internal callbacks. ! You can't use `macro parameter character #' in vertical mode. l.39029 # look at the R-level callbacks ! Missing $ inserted. $ l.39031 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39034 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39035 \end{Examples} ! Undefined control sequence. l.39036 \HeaderA {taskCallbackNames}{Query the Names of the Current Internal ... ! Undefined control sequence. l.39037 \aliasA {getTaskCallbackNames}{taskCallbackNames}{getTaskCallbackNames} ! Undefined control sequence. l.39038 \keyword {environment}{taskCallbackNames} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39040 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39045 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39047 \begin{Usage} Underfull \hbox (bad Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129ness 5260) in paragraph at lines 39032--39048 []\OT1/cmr/m/n/10 getTaskCallbackNames() removeTaskCallback("R-taskCallbackMana ger") Underfull \hbox (badness 2181) in paragraph at lines 39032--39048 \OT1/cmr/m/n/10 taskCall-back-Names-Query the Names of the Cur-rent In-ter-nal Top-Level ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39051 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39053 \begin{Value} ! Undefined control sequence. l.39059 call to \code {\LinkA{addTaskCallback}{addTaskCallback}}. ! Undefined control sequence. l.39059 call to \code{\LinkA {addTaskCallback}{addTaskCallback}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39060 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39062 \begin{Note} \relax ! Undefined control sequence. l.39063 One can use \code {\LinkA{taskCallbackManager}{taskCallbackManager}} ! Undefined control sequence. l.39063 One can use \code{\LinkA {taskCallbackManager}{taskCallbackManager}} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39068 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39070 \begin{SeeAlso} \relax ! Undefined control sequence. l.39071 \code {\LinkA{addTaskCallback}{addTaskCallback}}, ! Undefined control sequence. l.39071 \code{\LinkA {addTaskCallback}{addTaskCallback}}, ! Undefined control sequence. l.39072 \code {\LinkA{removeTaskCallback}{removeTaskCallback}}, ! Undefined control sequence. l.39072 \code{\LinkA {removeTaskCallback}{removeTaskCallback}}, ! Undefined control sequence. l.39073 \code {\LinkA{taskCallbackManager}{taskCallbackManager}}\bsl{} ! Undefined control sequence. l.39073 \code{\LinkA {taskCallbackManager}{taskCallbackManager}}\bsl{} ! Undefined control sequence. l.39073 ...lbackManager}{taskCallbackManager}}\bsl {} ! Undefined control sequence. l.39074 \url {https://developer.r-project.org/TaskHandlers.pdf} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39075 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39077 \begin{Examples} ! LaTeX Error: Environment ExampleCode und> for immediate help. ... l.39078 \begin{ExampleCode} ! Undefined control sequence. l.39080 cat("In handler\n ") ! You can't use `macro parameter character #' in vertical mode. l.39086 # now remove it by name ! Undefined control sequence. l.39092 cat("In handler\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39097 \end{ExampleCode} ! Missing $ inserted. $ l.39097 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39098 \end{Examples} ! Undefined control sequence. l.39099 \HeaderA {tempfile}{Create Names for Temporary Files}{tempfile} ! Undefined control sequence. l.39100 \aliasA {tempdir}{tempfile}{tempdir} ! Undefined control sequence. l.39101 \keyword {file}{tempfile} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39103 \begin{Description} \relax ! Undefined control sequence. l.39104 \code {tempfile} returns a vector of character strings which can be u... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39106 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39108 \begin{Usage} Overfull \hbox (144.15825pt too wide) in paragraph at lines 39090--39109 []\OT1/cmr/m/n/10 h <- taskCall-back-Man-ager() h$\OML/cmm/m/it/10 add\OT1/cmr/ m/n/10 (\OML/cmm/m/it/10 function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 expr; value; ok; visible\OT1/cmr/m/n/10 )[]\OML/cmm/m/it/10 ; name \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 39090--39109 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 simpleHandler\OT1/cmr/m/n/10 ")\OML/cmm/m/it/ 10 getTaskCallbackNames\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 removeTaskCallback\OT 1/cmr/m/n/10 ("\OML/cmm/m/it/10 R \OMS/cmsy/m/n/10 ^^@ [378> for immediate help. ... l.39113 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39115 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39116 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39117 \item[\code{pattern}] a non-empty character vector giving the initia... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39119 \item[\code{tmpdir}] a non-empty character vector giving the directo... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39120 \item[\code{fileext}] a non-empty character vector giving the file e... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39121 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39122 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39124 \begin{Details} \relax ! Undefined control sequence. l.39128 ...ikely to be unique among calls to \code {tempfile} ! Undefined control sequence. l.39129 in an \R {} session and across simultaneous \R{} sessions (unless ! Undefined control sequence. l.39129 ...\R{} session and across simultaneous \R {} sessions (unless ! Undefined control sequence. l.39130 \code {tmpdir} is specified). The filenames are guaranteed not to be ! Undefined control sequence. l.39134 \code {tmpdir}, the \code{pattern} string, a random string in hex and ! Undefined control sequence. l.39134 \code{tmpdir}, the \code {pattern} string, a random string in hex and ! Undefined control sequence. l.39135 a suffix of \code {fileext}. ! Undefined control sequence. l.39137 By default, \code {tmpdir} will be the directory given by ! Undefined control sequence. l.39138 \code {tempdir()}. This will be a subdirectory of the per-session ! Undefined control sequenc [130e. l.39139 ...found by the following rule when the \R {} session is ! Undefined control sequence. l.39140 started. The environment variables \env {TMPDIR}, \env{TMP} and ! Undefined control sequence. l.39140 ...nvironment variables \env{TMPDIR}, \env {TMP} and ! Undefined control sequence. l.39141 \env {TEMP} are checked in turn and the first found which points to a ! Undefined control sequence. l.39143 if none succeeds \file {/tmp} is used. The path should not contain s... ! Undefined control sequence. l.39144 ...f these environment variables in the \R {} session ! Undefined control sequence. l.39145 has no effect on \code {tempdir()}: the per-session temporary directory ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39147 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39149 \begin{Value} ! Undefined control sequence. l.39150 For \code {tempfile} a character vector giving the names of possible ! Undefined control sequence. l.39151 ...te that no files are generated by \code {tempfile}. ! Undefined control sequence. l.39153 For \code {tempdir}, the path of the per-session temporary directory. ! Undefined control sequence. l.39155 ... will be an absolute path (unless \code {tmpdir} is set to a ! Undefined control sequence. l.39157 \code {\LinkA{normalizePath}{normalizePath}}) and on macOS usually is... ! Undefined control sequence. l.39157 \code{\LinkA {normalizePath}{normalizePath}}) and on macOS usually is... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39158 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39160 \begin{Section} {Note on parallel} ! Undefined control sequence. l.39161 \R {} processes forked by functions such as \code{\LinkA{mclapply}{mc... ! Undefined control sequence. l.39161 ...esses forked by functions such as \code {\LinkA{mclapply}{mclapply... ! Undefined control sequence. l.39161 ...orked by functions such as \code{\LinkA {mclapply}{mclapply}} and ! Undefined control sequence. l.39162 \code {\LinkA{makeForkCluster}{makeForkCluster}} in package \pkg{para... ! Undefined control sequence. l.39162 \code{\LinkA {makeForkCluster}{makeForkCluster}} in package \pkg{para... ! Undefined control sequence. l.39162 ...ster}{makeForkCluster}} in package \pkg {parallel} share a ! Undefined control sequence. l.39166 that \code {tempfile} calls in different children try different names. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... > for immediate help. ... l.39169 \begin{Source} \relax ! Undefined control sequence. l.39170 The final component of \code {tempdir()} is created by the POSIX system ! Undefined control sequence. l.39171 call \code {mkdtmp}, or if this is not available (e.g.~on ! Undefined control sequence. l.39172 ...rived from the source code of GNU \code {glibc}. ! Undefined control sequence. l.39176 It will be of the form \file {RtmpXXXXXX} where the last 6 characters ! Undefined control sequence. l.39178 replacements be ASCII, which allows \code {.} (so the value may appear ! Undefined control sequence. l.39179 to have a file extension) and \LinkA {regexp}{regexp} metacharacters ... ! Undefined control sequence. l.39180 \code {+}. Most commonly the replacements are from the \LinkA{regexp... ! Undefined control sequence. l.39180 ...ly the replacements are from the \LinkA {regexp}{regexp} ! Undefined control sequence. l.39181 pattern \code {[A-Za-z0-9]}, but \code{.} \emph{has} been seen. ! Undefined control sequence. l.39181 pattern \code{[A-Za-z0-9]}, but \code {.} \emph{has} been seen. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39182 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39184 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39188 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39190 \begin{SeeAlso} \relax ! Undefined control sequence. l.39191 \code {\LinkA{unlink}{unlink}} for deleting files. ! Undefined control sequence. l.39191 \code{\LinkA {unlink}{unlink}} for deleting files. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39192 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39194 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39195 \b> for immediate help. ... l.39202 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39203 \end{Examples} ! Undefined control sequence. l.39204 \HeaderA {textConnection}{Text Connections}{textConnection} ! Undefined control sequence. l.39205 \aliasA {textConnectionValue}{textConnection}{textConnectionValue} ! Undefined control sequence. l.39206 \keyword {file}{textConnection} ! Undefined control sequence. l.39207 \keyword {connection}{textConnection} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39209 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39211 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39213 \begin{Usage} Underfull \hbox (badness 1264) in paragraph at lines 39201--39214 []\OT1/cmr/m/n/10 tempdir() works on all plat-forms with a platform-dependent re-sult [379 [131>] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39220 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39222 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39223 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39224 \item[\code{object}] character. A description of the \LinkA{connect... ! Undefined control sequence. l.39224 ...character. A description of the \LinkA {connection}{connection}. ! Undefined control sequence. l.39225 For an input this is an \R {} character vector object, and for an output ! Undefined control sequence. l.39226 connection the name for the \R {} character vector to receive the ! Undefined control sequence. l.39227 output, or \code {NULL} (for none). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39229 \item[\code{open}] character string. Either \code{"r"} (or equivale... ! Undefined control sequence. l.39229 ...{open}] character string. Either \code {"r"} (or equivalently \co... ! Undefined control sequence. l.39229 ...ither \code{"r"} (or equivalently \code {""}) ! Undefined control sequence. l.39230 for an input connection or \code {"w"} or \code{"a"} for an output ! Undefined control sequence. l.39230 ...input connection or \code{"w"} or \code {"a"} for an output ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39232 \item[\code{local}] logical. Used only for output connections. If ... ! Undefined control sequence. l.39232 ... only for output connections. If \code {TRUE}, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39235 \item[\code{encoding}] character string, partially matched. Used on... ! Undefined control sequence. l.39236 marked strings in \code {object} should be handled: converted to the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39238 \item[\code{c for immediate help. ... l.39239 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39240 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39242 \begin{Details} \relax ! Undefined control sequence. l.39244 ...connection object is created, and \code {close} destroys ! Undefined control sequence. l.39245 the copy. \code {object} should be the name of a character vector: ! Undefined control sequence. l.39246 ...s will be accepted provided they \LinkA {deparse}{deparse} to ! Undefined control sequence. l.39249 ... connection is opened and creates an \R {} character vector ! Undefined control sequence. l.39251 depending on the value of the \code {local} argument. This object wi... ! Undefined control sequence. l.39253 \code {\LinkA{isIncomplete}{isIncomplete}} will indicate if there is ... ! Undefined control sequence. l.39253 \code{\LinkA {isIncomplete}{isIncomplete}} will indicate if there is ... ! Undefined control sequence. l.39256 end-of-line, represented by \code {"\bsl{}n"} in \R{}.) The output ... ! Undefined control sequence. l.39256 end-of-line, represented by \code{"\bsl {}n"} in \R{}.) The output ... ! Undefined control sequence. l.39256 ..., represented by \code{"\bsl{}n"} in \R {}.) The output character ! Undefined control sequence. l.39257 vector has locked bindings (see \code {\LinkA{lockBinding}{lockBindin... ! Undefined control sequence. l.39257 ...r has locked bindings (see \code{\LinkA {lockBinding}{lockBinding}... ! Undefined control sequence. l.39258 \code {close} is called on the connection. The character vector can ! Undefined control sequence. l.39259 also be retrieved \emph{via} \code {textConnectionValue}, which is the ! Undefined control sequence. l.39260 only way to do so if \code {object = NULL}. If the current locale is ! Undefined control sequence. l.39262 will be marked accordingly (see \code {Encoding}). ! Undefined control sequence. l.39264 Opening a text connection with \code {mode = "a"} will attempt to ! Undefined control sequence. l.39270 You cannot \code {seek} on a text connection, and \code{seek} will ! Undefined control sequence. l.39270 ...e{seek} on a text connection, and \code {seek} will ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39276 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or > for immediate help. ... l.39278 \begin{Value} ! Undefined control sequence. l.39279 For \code {textConnection}, a connection object of class ! Undefined control sequence. l.39280 \code {"textConnection"} which inherits from class \code{"connection"}. ! Undefined control sequence. l.39280 ...ction"} which inherits from class \code {"connection"}. ! Undefined control sequence. l.39282 For \code {textConnectionValue}, a character vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39283 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39285 \begin{Note} \relax ! Undefined control sequence. l.39288 better to use an anonymous \code {\LinkA{file}{file}()} connection to... ! Undefined control sequence. l.39288 better to use an anonymous \code{\LinkA {file}{file}()} connection to... ! Undefined control sequence. l.39291 On (rare) platforms where \code {vsnprintf} does not return the needed ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39295 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39297 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39301 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39303 \begin{SeeAlso} \relax ! Undefined control sequence. l.39304 \code {\LinkA{connections}{connections}}, \code{\LinkA{showConnection... ! Undefined control sequence. l.39304 \code{\LinkA {connections}{connections}}, \code{\LinkA{showConnection... ! Undefined control sequence. l.39304 ...LinkA{connections}{connections}}, \code {\LinkA{showConnections}{s... ! Undefined control sequence. l.39304 ...onnections}{connections}}, \code{\LinkA {showConnections}{showConn... ! Undefined control sequence. l.39305 \code {\LinkA{pushBack}{pushBack}}, \code{\LinkA{capture.output}{capt... ! Undefined control sequence. l.39305 \code{\LinkA {pushBack}{pushBack}}, \code{\LinkA{capture.output}{capt... ! Undefined control sequence. l.39305 \code{\LinkA{pushBack}{pushBack}}, \code {\LinkA{capture.output}{capt... ! Undefined control sequence. l.39305 ...inkA{pushBack}{pushBack}}, \code{\LinkA {capture.output}{capture.o... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39306 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39308 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39309 \begin{ExampleCode} [380> ! Undefined control sequence. l.39321 cat("testit4\n ", file = zz) ! You can't use `macro parameter character #' in vertical mode. l.39326 # capture R output: use part of example from help(lm) ! Undefined control sequence. l.39334 cat("\nSummary of Residuals:\n\n") ! Undefined control sequence. l.39334 cat("\nSummary of Residuals:\n \n") ! Undefined control sequence. l.39334 cat("\nSummary of Residuals:\n\n ") ! Undefined control sequence. l.39338 cat(foo, sep = "\n ") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39340 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39341 \end{Examples} ! Undefined control sequence. l.39342 \HeaderA {tilde}{Tilde Operator}{tilde} ! Undefined control sequence. l.39343 \aliasA {\textasciitilde{}}{tilde}{.Rtilde.} ! Undefined control sequence. l.39344 \keyword {models}{tilde} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39346 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39348 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39350 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39354 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39356 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39357 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39358 \item[\code{y, model}] symbolic expressions. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39359 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for exp] for immediate help. ... l.39360 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39362 \begin{Details} \relax ! Undefined control sequence. l.39366 A formula has \LinkA {mode}{mode} \code{\LinkA{call}{call}}. It can ... ! Undefined control sequence. l.39366 A formula has \LinkA{mode}{mode} \code {\LinkA{call}{call}}. It can ... ! Undefined control sequence. l.39366 ...ula has \LinkA{mode}{mode} \code{\LinkA {call}{call}}. It can be ... ! Undefined control sequence. l.39367 \code {[[}: the components are \code{\textasciitilde{}}, the left-han... ! Undefined control sequence. l.39367 \code{[[}: the components are \code {\textasciitilde{}}, the left-han... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39369 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39371 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39376 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39378 \begin{SeeAlso} \relax ! Undefined control sequence. l.39379 \code {\LinkA{formula}{formula}} ! Undefined control sequence. l.39379 \code{\LinkA {formula}{formula}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39380 \end{SeeAlso} ! Undefined control sequence. l.39381 \HeaderA {timezones}{Time Zones}{timezones} ! Undefined control sequence. l.39382 \aliasA {OlsonNames}{timezones}{OlsonNames} ! Undefined control sequence. l.39383 \aliasA {Sys.timezone}{timezones}{Sys.timezone} ! Undefined control sequence. l.39384 \aliasA {time zone}{timezones}{time zone} ! Undefined control sequence. l.39385 \aliasA {time zones}{timezones}{time zones} ! Undefined control sequence. l.39386 \aliasA {timezone}{timezones}{timezone} ! Undefined control sequence. l.39387 \aliasA {TZ}{timezones}{TZ} ! Undefined control sequence. l.39388 \aliasA {TZDIR}{timezones}{TZDIR} ! Undefined control sequence. l.39389 \keyword {utilities}{timezones} ! Undefined control sequence. l.39390 \keyword {chron}{timezones} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.393 [134> for immediate help. ... l.39395 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39397 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39403 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39405 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39406 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39407 \item[\code{location}] logical: should an attempt be made to find the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39410 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39411 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39413 \begin{Details} \relax ! Undefined control sequence. l.39414 ...fic topic, but these days almost all \R {} ! Undefined control sequence. l.39416 ...4 and Tcl >= 8.5, and installed with \R {} on ! Undefined control sequence. l.39418 implementations. It is possible to use \R {}'s own version of the code ! Undefined control sequence. l.39423 variable \env {TZ}: see the section on `Time zone names' for ! Undefined control sequence. l.39424 suitable values. \code {Sys.timezone()} will return the value of ! Undefined control sequence. l.39425 \env {TZ} if set (and on some OSes it is always set), otherwise it will ! Undefined control sequence. l.39426 ... retrieve a value which if set for \env {TZ} would give the ! Undefined control sequence. l.39428 \code {Sys.timezone(FALSE)} on Windows will retrieve the abbreviation ! Undefined control sequence. l.39431 If \env {TZ} is set but empty or invalid, most platforms default to ! Undefined control sequence. l.39432 \samp {UTC}, the time zone colloquially known as \samp{GMT} (see ! Undefined control sequence. l.39432 ...e time zone colloquially known as \samp {GMT} (see ! Undefined control sequence. l.39433 \url {https://en.wikipedia.org/wiki/Coordinated_Universal_Time}). (Some ! Missing $ inserted. $ l.39433 ...ps://en.wikipedia.org/wiki/Coordinated_ Universal_Time}). (Some ! Extra }, or forgotten $. l.39433 ...ia.org/wiki/Coordinated_Universal_Time} ). (Some ! Missing $ inserted. $ l.39435 Underfull \hbox (badness 10000) in paragraph at lines 39431--39435 []\OT1/cmr/m/n/10 If TZ is set but empty or in-valid, most plat-forms de- Underfull \hbox (badness 10000) in paragraph at lines 39431--39435 \OT1/cmr/m/n/10 fault to UTC, the time zone col-lo-qui-ally known as GMT (see Overfull \hbox (210.98618pt too wide) in paragraph at lines 39431--39435 \OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Coordinated$[]\OML/cmm/m/it/10 ni versal[]ime\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Somebutnotallplatformswillgiveawarningforinvalidtimezones:\OT1/cmr/m/n/10 )$ [381>] for immediate help. ... l.39454 \end{Details} ! Missing } inserted. } l.39454 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39456 \begin{Value} ! Undefined control sequence. l.39457 \code {Sys.timezone} returns an OS-specific character string, possibly ! Undefined control sequence. l.39458 \code {NA} or an empty string (which on some OSes means \samp{UTC}). ! Undefined control sequence. l.39458 ... string (which on some OSes means \samp {UTC}). ! Undefined control sequence. l.39459 For the default \code {location = TRUE} this will be a location such as ! Undefined control sequence. l.39460 \code {"Europe/London"} if one can be ascertained. For \code{location ! Undefined control sequence. l.39460 ...} if one can be ascertained. For \code {location ! Undefined control sequence. l.39461 ...is may be an abbreviation such as \code {"EST"} or ! Undefined control sequence. l.39462 \code {"CEST"} on Windows. ! Undefined control sequence. l.39464 \code {OlsonNames} returns a character vector. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39465 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39467 \begin{Section} {Time zone names} ! Undefined control sequence. l.39468 Names \code {"UTC"} and its synonym \code{"GMT"} are accepted on all ! Undefined control sequence. l.39468 Names \code{"UTC"} and its synonym \code {"GMT"} are accepted on all ! Undefined control sequence. l.39472 for the C function \code {tzset} can be helpful, but it can also be ! Undefined control sequence. l.39474 environment variable \env {TZ} at ! Undefined control sequence. l.39475 \url {http://pubs.opengroup.org/onlinepubs/9699919799/basedefs/V1_cha... ! Missing $ inserted. $ l.39475 ....org/onlinepubs/9699919799/basedefs/V1_ chap08.html#tag_08}), ! You can't use `macro parameter character #' in math mode. l.39475 ...ubs/9699919799/basedefs/V1_chap08.html# tag_08}), ! Extra }, or forgotten $. l.39475 ...9919799/basedefs/V1_chap08.html#tag_08} ), ! Missing $ inserted. $ l.39478 Overfull \hbox (326.82161pt too wide) in paragraph at lines 39471--39478 \OT1/cmr/m/n/10 http://pubs.opengroup.org/onlinepubs/9699919799/basedefs/V1$[]\ OML/cmm/m/it/10 hap\OT1/cmr/m/n/10 08\OML/cmm/m/it/10 :htmlta [136>g[]\OT1/cmr/m/n/10 8)\OML/cmm/m/it/10 ; whichisoftenatleastpartiallysupported; butthereareothermo reuser \OMS/cmsy/m/n/10 ^^@ ! Undefined control sequence. l.39479 Almost all \R {} platforms make use of a time-zone database originally ! Undefined control sequence. l.39482 city), e.g., \code {Europe/London}, \code{America/Los\_Angeles}, ! Undefined control sequence. l.39482 city), e.g., \code{Europe/London}, \code {America/Los\_Angeles}, ! Undefined control sequence. l.39483 \code {Pacific/Easter}. Some traditional designations are also allowed ! Undefined control sequence. l.39484 such as \code {EST5EDT} or \code{GB}. (Beware that some of these ! Undefined control sequence. l.39484 such as \code{EST5EDT} or \code {GB}. (Beware that some of these ! Undefined control sequence. l.39485 ...be what you expect: in particular \code {EST} is a ! Undefined control sequence. l.39487 \code {EST5EDT} nor (Australian) Eastern Standard Time.) The ! Undefined control sequence. l.39491 \url {http://www.twinsun.com/tz/tz-link.htm} for more details and ! Undefined control sequence. l.39498 used \samp {PMT} (`Paris Mean Time') from 1891 to 1911 then ! Undefined control sequence. l.39499 \samp {WET/WEST} up to 1940 and \samp{CET/CEST} from 1946. (In almost ! Undefined control sequence. l.39499 \samp{WET/WEST} up to 1940 and \samp {CET/CEST} from 1946. (In almost ! Undefined control sequence. l.39504 The function \code {OlsonNames} returns the time-zone names known to ! Undefined control sequence. l.39506 ...n in the file system varies, e.g.~\file {/usr/share/zoneinfo} ! Undefined control sequence. l.39507 (Linux, macOS, FreeBSD), \file {/usr/share/lib/zoneinfo} (Solaris, AIX), ! Undefined control sequence. l.39509 \file {zone.tab} under that directory listing the locations known as ! Undefined control sequence. l.39510 time-zone names (but not for example \code {EST5EDT}): this is read by ! Undefined control sequence. l.39511 \code {OlsonNames}. See also ! Undefined control sequence. l.39512 \url {https://en.wikipedia.org/wiki/Zone.tab}. [382 ! Undefined control sequence. l.39514 Where \R {} was configured with option \option{--with-internal-tzcode} ! Undefined control sequence. l.39514 ...\R{} was configured with option \option {--with-internal-tzcode} ! Undefined control sequence. l.39516 \code {file.path(R.home("share"), "zoneinfo")} is used by default: file ! Undefined control sequence. l.39517 \file {VERSION} in that directory states the version. Environment ! Undefined control sequence. l.39518 variable \env {TZDIR} can be used to point to a different ! Undefined control sequence. l.39519 \file {zoneinfo} directory: this is also supported by the native Underfull \hbox (badness 1931) in paragraph at lines 39514--39521 \OT1/cmr/m/n/10 on ma-cOS and Win-dows: rec-om-mended on So-laris), the databas e at ! Undefined control sequence. l.39522 ...ms support time zones of the form \samp {GMT+n} and ! Undefined control sequence. l.39523 \samp {GMT-n}, which assume at a fixed offset from UTC (hence no DST). ! Undefined control sequence. l.39525 \samp {PST8PDT}), negative offsets are times ahead of (east of) UTC, ! Undefined control sequence. l.39530 ...cal Mean Time' and abbreviated as \samp {LMT} in the ! Undefined control sequence. l.39534 mainland France) and switched to \samp {GMT+0} in 1911. ! Undefined control sequence. l.39537 ...systems (notably Linux) have a \command {tzselect} command which ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39539 \end{Section} ! Missing } inserted. } l.39539 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39541 \begin{Section} {Warning} ! Undefined control sequence. l.39553 ... their limit, and that can crash the \R {} session. ! Undefined control sequence. l.39555 \code {OlsonNames} tries to find an Olson database in known locations. ! Undefined control sequence. l.39558 date-time code linked into \R {}. Fortunately names are added rarely ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39560 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39562 \begin{Note} \relax ! Undefined control sequence. l.39572 for example, \code {"gmt"} is valid on some platforms and not on others. ! Undefined control sequence. l.39577 Incorrect results will never be an \R {} issue, so please ensure that... ! Undefined control sequence. l.39578 have the courtesy not to blame \R {} for them. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... for immediate help. ... l.39581 \begin{SeeAlso} \relax ! Undefined control sequence. l.39582 \code {\LinkA{Sys.time}{Sys.time}}, \code{\LinkA{as.POSIXlt}{as.POSIX... ! Undefined control sequence. l.39582 \code{\LinkA {Sys.time}{Sys.time}}, \code{\LinkA{as.POSIXlt}{as.POSIX... ! Undefined control sequence. l.39582 \code{\LinkA{Sys.time}{Sys.time}}, \code {\LinkA{as.POSIXlt}{as.POSIX... ! Undefined control sequence. l.39582 ...inkA{Sys.time}{Sys.time}}, \code{\LinkA {as.POSIXlt}{as.POSIXlt}}. ! Undefined control sequence. l.39584 \url {https://en.wikipedia.org/wiki/Time_zone} and ! Missing $ inserted. $ l.39584 \url{https://en.wikipedia.org/wiki/Time_ zone} and ! Extra }, or forgotten $. l.39584 ...ttps://en.wikipedia.org/wiki/Time_zone} and ! Undefined control sequence. l.39585 \url {http://www.twinsun.com/tz/tz-link.htm} for extensive sets of li... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39586 \end{SeeAlso} ! Missing $ inserted. $ l.39586 \end{SeeAlso} ! Missing } inserted. } l.39586 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39588 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39589 \begin{ExampleCode} Overfull \hbox (173.98299pt too wide) in paragraph at lines 39584--39591 []\OT1/cmr/m/n/10 https://en.wikipedia.org/wiki/Time$[]\OML/cmm/m/it/10 oneand[ ]forextensivesetsoflinks:$ ! You can't use `macro parameter character #' in horizontal mode. l.39592 str(OlsonNames()) # # a few hundred names ! You can't use `macro parameter character #' in horizontal mode. l.39592 str(OlsonNames()) ## a few hundred names ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39593 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39594 \end{Examples} ! Undefined control sequence. l.39595 \HeaderA {toString}{Convert an R Object to a Character String}{toString} ! Undefined control sequence. l.39596 \methaliasA {toString.default}{toString}{toString.default} ! Undefined control sequence. l.39597 \keyword {utilities}{toString} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediat>e help. ... l.39599 \begin{Description} \relax ! Undefined control sequence. l.39600 This is a helper function for \code {\LinkA{format}{format}} to produ... ! Undefined control sequence. l.39600 This is a helper function for \code{\LinkA {format}{format}} to produ... ! Undefined control sequence. l.39601 character string describing an \R {} object. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39602 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39604 \begin{Usage} [383 for immediate help. ... l.39611 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39613 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39614 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39615 \item[\code{x}] The object to be converted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39616 \item[\code{width}] Suggestion for the maximum field width. Values of ! Undefined control sequence. l.39617 \code {NULL} or \code{0} indicate no maximum. ! Undefined control sequence. l.39617 \code{NULL} or \code {0} indicate no maximum. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39619 \item[\code{...}] Optional arguments passed to or from methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39620 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39621 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39623 \begin{Details} \relax ! Undefined control sequence. l.39626 \code {width} argument to specify the maximum display width (as measured ! Undefined control sequence. l.39627 by \code {\LinkA{nchar}{nchar}(type = "width")} of the result. ! Undefined control sequence. l.39627 by \code{\LinkA {nchar}{nchar}(type = "width")} of the result. ! Undefined control sequence. l.39629 The default method first converts \code {x} to character and then ! Undefined control sequence. l.39630 ...tenates the elements separated by \code {", "}. ! Undefined control sequence. l.39631 If \code {width} is supplied and is not \code{NULL}, the default method ! Undefined control sequence. l.39631 ...ode{width} is supplied and is not \code {NULL}, the default method ! Undefined control sequence. l.39632 returns the first \code {width - 4} characters of the result with ! Undefined control sequence. l.39633 \code {....} appended, if the full result would use more than ! Undefined control sequence. l.39634 \code {width} characters. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39635 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39637 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39639 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39641 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39643 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39645 \begin{SeeAlso} \relax ! Undefined control sequence. l.39646 \code {\LinkA{format}{format}} ! Undefined control sequence. l.39646 \code{\LinkA {format}{format}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39647 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39649 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39650 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39654 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39655 \end{Examples} ! Undefined control sequence. l.39656 \HeaderA {trace}{Interactive Tracing and Debugging of Calls to a Func... ! Undefined control sequence. l.39657 \aliasA {.doTrace}{trace}{.doTrace} ! Undefined control sequence. l.39658 \aliasA {returnValue}{trace}{returnValue} ! Undefined control sequence. l.39659 \aliasA > [139 {tracingState}{trace}{tracingState} ! Undefined control sequence. l.39660 \aliasA {untrace}{trace}{untrace} ! Undefined control sequence. l.39661 \keyword {programming}{trace} ! Undefined control sequence. l.39662 \keyword {debugging}{trace} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39664 \begin{Description} \relax ! Undefined control sequence. l.39665 A call to \code {trace} allows you to insert debugging code (e.g., a ! Undefined control sequence. l.39666 call to \code {\LinkA{browser}{browser}} or \code{\LinkA{recover}{rec... ! Undefined control sequence. l.39666 call to \code{\LinkA {browser}{browser}} or \code{\LinkA{recover}{rec... ! Undefined control sequence. l.39666 ...code{\LinkA{browser}{browser}} or \code {\LinkA{recover}{recover}}... ! Undefined control sequence. l.39666 ...inkA{browser}{browser}} or \code{\LinkA {recover}{recover}}) at ch... ! Undefined control sequence. l.39667 places in any function. A call to \code {untrace} cancels the tracing. ! Undefined control sequence. l.39669 ...he generic function. Trace code (\code {tracer}) can be any ! Undefined control sequence. l.39670 \R {} expression. Tracing can be temporarily turned on or off globally ! Undefined control sequence. l.39671 by calling \code {tracingState}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39672 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39674 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39684 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39686 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39687 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39688 \item[\code{what}] The name (quoted or not) of a function to be trac... ! Undefined control sequence. l.39689 untraced. For \code {untrace} or for \code{trace} with more than one ! Undefined control sequence. l.39689 untraced. For \code{untrace} or for \code {trace} with more than one ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the for immediate help. ... l.39692 \item[\code{tracer}] either a \LinkA{function}{function} or an uneva... ! Undefined control sequence. l.39692 \item[\code{tracer}] either a \LinkA {function}{function} or an uneva... ! Undefined control sequence. l.39695 specified by the argument \code {at}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39697 \item[\code{exit}] either a \code{\LinkA{function}{function}} or an ... ! Undefined control sequence. l.39697 \item[\code{exit}] either a \code {\LinkA{function}{function}} or an ... ! Undefined control sequence. l.39697 \item[\code{exit}] either a \code{\LinkA {function}{function}} or an ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39701 \item[\code{at}] optional numeric vector or list. If supplied, \cod... ! Undefined control sequence. l.39701 ...ric vector or list. If supplied, \code {tracer} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39705 \item[\code{print}] If \code{TRUE} (as per default), a descriptive l... ! Undefined control sequence. l.39705 \item[\code{print}] If \code {TRUE} (as per default), a descriptive l... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39707 \item[\code{signature}] If this argument is supplied, it should be a ! Undefined control sequence. l.39708 signature for a method for function \code {what}. In this case, the [384>] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39710 \item[\code{edit}] For complicated tracing, such as tracing within ... ! Undefined control sequence. l.39712 ... the function. If so, supply the \code {edit} ! Undefined control sequence. l.39713 argument either as \code {TRUE}, or as the name of the editor you ! Undefined control sequence. l.39714 want to use. Then \code {trace()} will call \code{\LinkA{edit}{edit}... ! Undefined control sequence. l.39714 ...e. Then \code{trace()} will call \code {\LinkA{edit}{edit}} and ! Undefined control sequence. l.39714 ...n \code{trace()} will call \code{\LinkA {edit}{edit}} and ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39718 \item[\code{where}] where to look for the function to be ! Undefined control sequence. l.39720 \code {trace}. ! Undefined control sequence. l.39729 argument \code {where} to a function in the namespace. The tracing ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39735 \item[\code{on}] logical; a call to the support function \code{traci... ! Undefined control sequence. l.39735 ...l; a call to the support function \code {tracingState} returns \co... ! Undefined control sequence. l.39735 ...ction \code{tracingState} returns \code {TRUE} ! Undefined control sequence. l.39736 if tracing is globally turned on, \code {FALSE} otherwise. An ! Undefined control sequence. l.39738 tracing state is \code {FALSE}, none of the trace actions will ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39741 \item[\code{expr, msg}] arguments to the support function \code{.doT... ! Undefined control sequence. l.39741 ...arguments to the support function \code {.doTrace}, calls to ! Undefined control sequence. l.39743 \code {expr} is the tracing action (such as a call to ! Undefined control sequence. l.39744 \code {browser()}, and \code{msg} is a string identifying the ! Undefined control sequence. l.39744 \code{browser()}, and \code {msg} is a string identifying the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39747 \item[\code{default}] If \code{returnValue} finds no return value (e.g. ! Undefined control sequence. l.39747 \item[\code{default}] If \code {returnValue} finds no return value (e.g. ! Undefined control sequence. l.39749 will return \code {default} in [140 for immediate help. ... l.39751 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39752 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39754 \begin{Details} \relax ! Undefined control sequence. l.39755 The \code {trace} function operates by constructing a revised version ! Undefined control sequence. l.39756 ...he function (or of the method, if \code {signature} is supplied), ! Undefined control sequence. l.39758 If only the \code {what} argument is given, a line of trace printing is ! Undefined control sequence. l.39760 earlier version of \code {trace}). ! Undefined control sequence. l.39762 The object constructed by \code {trace} is from a class that extends ! Undefined control sequence. l.39763 \code {"function"} and which contains the original, untraced version. ! Undefined control sequence. l.39764 A call to \code {untrace} re-assigns this version. ! Undefined control sequence. l.39766 If the argument \code {tracer} or \code{exit} is the name of a ! Undefined control sequence. l.39766 If the argument \code{tracer} or \code {exit} is the name of a ! Undefined control sequence. l.39769 functions \code {\LinkA{browser}{browser}} and \code{\LinkA{recover}{... ! Undefined control sequence. l.39769 functions \code{\LinkA {browser}{browser}} and \code{\LinkA{recover}{... ! Undefined control sequence. l.39769 ...ode{\LinkA{browser}{browser}} and \code {\LinkA{recover}{recover}}... ! Undefined control sequence. l.39769 ...nkA{browser}{browser}} and \code{\LinkA {recover}{recover}} the ! Undefined control sequence. l.39774 The \code {tracer} or \code{exit} argument can also be an unevaluated ! Undefined control sequence. l.39774 The \code{tracer} or \code {exit} argument can also be an unevaluated ! Undefined control sequence. l.39775 ...on (such as returned by a call to \code {\LinkA{quote}{quote}} or ! Undefined control sequence. l.39775 ...h as returned by a call to \code{\LinkA {quote}{quote}} or ! Undefined control sequence. l.39776 \code {\LinkA{substitute}{substitute}}). This expression itself is i... ! Undefined control sequence. l.39776 \code{\LinkA {substitute}{substitute}}). This expression itself is i... ! Undefined control sequence. l.39780 ... case you probably want to supply \code {print = FALSE} in the call ! Undefined control sequence. l.39781 to \code {trace} also). [385> for immediate help. ... l.39860 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39862 \begin{Value} ! Undefined control sequence. l.39863 ...ersion (just the first argument), \code {trace} returns ! Undefined control sequence. l.39864 an invisible \code {NULL}. [386> Overfull \hbox (22.06111pt too wide) in paragraph at lines 12183--12183 [] @texttt ptr = R_MakeExternalPtr(thisHandle, install("RODBC_channel"), R_ NilValue);[] [141]] ! Undefined control sequence. l.39868 \code {untrace} returns the function name invisibly. ! Undefined control sequence. l.39870 \code {tracingState} returns the current global tracing state, and po... ! Undefined control sequence. l.39873 When called during \code {on.exit} processing, \code{returnValue} ret... ! Undefined control sequence. l.39873 ...during \code{on.exit} processing, \code {returnValue} returns ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39876 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39878 \begin{Note} \relax ! Undefined control sequence. l.39879 Using \code {trace()} is conceptually a generalization of ! Undefined control sequence. l.39880 \code {\LinkA{debug}{debug}}, implemented differently. Namely by cal... ! Undefined control sequence. l.39880 \code{\LinkA {debug}{debug}}, implemented differently. Namely by cal... ! Undefined control sequence. l.39881 \code {\LinkA{browser}{browser}} via its \code{tracer} or \code{exit}... ! Undefined control sequence. l.39881 \code{\LinkA {browser}{browser}} via its \code{tracer} or \code{exit}... ! Undefined control sequence. l.39881 ...\LinkA{browser}{browser}} via its \code {tracer} or \code{exit} ar... ! Undefined control sequence. l.39881 ...rowser}} via its \code{tracer} or \code {exit} argument. ! Undefined control sequence. l.39886 ...for the function name requires the \pkg {methods} package ! Undefined control sequence. l.39890 ...ods dispatch is not currently on, \code {trace} will load the ! Undefined control sequence. l.39892 \code {\LinkA{search}{search}} list. ! Undefined control sequence. l.39892 \code{\LinkA {search}{search}} list. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39893 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39895 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39899 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39901 \begin{SeeAlso} \relax ! Undefined control sequence. l.39902 \code {\LinkA{browser}{browser}} and \code{\LinkA{recover}{recover}},... ! Undefined control sequence. l.39902 \code{\LinkA {browser}{browser}} and \code{\LinkA{recover}{recover}},... ! Undefined control sequence. l.39902 \code{\LinkA{browser}{browser}} and \code {\LinkA{recover}{recover}},... ! Undefined control sequence. l.39902 ...nkA{browser}{browser}} and \code{\LinkA {recover}{recover}}, the l... ! Undefined control sequence. l.39904 also, \code {\LinkA{quote}{quote}} and \code{\LinkA{substitute}{subst... ! Undefined control sequence. l.39904 also, \code{\LinkA {quote}{quote}} and \code{\LinkA{substitute}{subst... ! Undefined control sequence. l.39904 ..., \code{\LinkA{quote}{quote}} and \code {\LinkA{substitute}{substi... ! Undefined control sequence. l.39904 ...{\LinkA{quote}{quote}} and \code{\LinkA {substitute}{substitute}} for ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39906 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39908 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39909 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.39912 # # Very simple use ! You can't use `macro parameter character #' in vertical mode. l.39912 ## Very simple use ! You can't use `macro parameter character #' in horizontal mode. l.39914 hist(rnorm(100)) # shows about 3-4 calls to sum() ! You can't use `macro parameter character #' in vertical mode. l.39917 # # Show how pt() is called from inside power.t.test(): ! You can't use `macro parameter character #' in vertical mode. l.39917 ## Show how pt() is called from inside power.t.test(): ! You can't use `macro parameter character #' in horizontal mode. l.39919 trace(pt) # # would show ~20 calls, but we want to see more: ! You can't use `macro parameter character #' in horizontal mode. l.39919 trace(pt) ## would show ~20 calls, but we want to see more: ! You can't use `macro parameter character #' in horizontal mode. l.39921 print = FALSE) # <- not showing typical extra ! You can't use `macro parameter character #' in horizontal mode. l.39922 power.t.test(20, 1, power=0.8, sd=NULL) # #--> showing the ncp root ... ! You can't use `macro parameter character #' in horizontal mode. l.39922 ...r.t.test(20, 1, power=0.8, sd=NULL) ## --> showing the ncp root f... Underfull \hbox (badness 1286) in paragraph at lines 39917--39924 \OT1/cmr/m/n/10 would show 20 calls, but we want to see more: trace(pt, tracer = ! Missing $ inserted. $ l.39929 if (x > 0) x ^ y else stop("x must be positive") ! Extra }, or forgotten $. l.39930 } ! Missing $ inserted. $ l.39931 Underfull \hbox (badness 10000) in paragraph at lines 39927--39931 []\OT1/cmr/m/n/10 f <- func-tion(x, y) y <- pmax(y, 0.001) if (x > 0) x ! You can't use `macro parameter character #' in vertical mode. l.39932 # # arrange to call the browser on entering and exiting ! You can't use `macro parameter character #' in vertical mode. l.39932 ## arrange to call the browser on entering and exiting ! You can't use `macro parameter character #' in horizontal mode. l.39933 # # function f ! You can't use `macro parameter character #' in horizontal mode. l.39933 ## function f ! You can't use `macro parameter character #' in vertical mode. l.39937 # # instead, conditionally assign some data, and then browse ! You can't use `macro parameter character #' in vertical mode. l.39937 ## instead, conditionally assign some data, and then browse ! You can't use `macro parameter character #' in horizontal mode. l.39938 # # on exit, but only then. Don't bother me otherwise ! You can't use `macro parameter character #' in horizontal mode. l.39938 ## on exit, but only then. Don't bother me otherwise ! You can't use `macro parameter character #' in vertical mode. l.39944 # # Enter the browser just before stop() is called. First, find ! You can't use `macro parameter character #' in vertical mode. l.39944 ## Enter the browser just before stop() is called. First, find ! You can't use `macro parameter character #' in horizontal mode. l.39945 # # the step numbers ! You can't use `macro parameter character #' in horizontal mode. l.39945 ## the step numbers ! You can't use `macro parameter character #' in vertical mode. l.39950 # # Now call the browser there ! You can't use `macro parameter character #' in vertical mode. l.39950 ## Now call the browser there ! You can't use `macro parameter character #' in vertical mode. l.39954 # # trace a utility function, with recover so we ! You can't use `macro parameter character #' in vertical mode. l.39954 ## trace a utility function, with recover so we ! You can't use `macro parameter character #' in horizontal mode. l.39955 # # can browse in the calling functions as well. ! You can't use `macro parameter character #' in horizontal mode. l.39955 ## can browse in the calling functions as well. ! You can't use `macro parameter character #' in vertical mode. l.39960 # # turn off the tracing ! You can't use `macro parameter character #' in vertical mode. l.39960 ## turn off the tracing ! You can't use `macro parameter character #' in vertical mode. l.39964 # # Not run: ! You can't use `macro parameter character #' in vertical mode. l.39964 ## Not run: [387 Output written on R-intro.pdf (105 pages, 696956 bytes). Transcript written on R-intro.log. [142] ! You can't use `macro parameter character #' in horizontal mode. l.39965 # # trace calls to the function lm() that come from ! You can't use `macro parameter character #' in horizontal mode. l.39965 ## trace calls to the function lm() that come from ! You can't use `macro parameter character #' in horizontal mode. l.39966 # # the nlme package. ! You can't use `macro parameter character #' in horizontal mode. l.39966 ## the nlme package. ! You can't use `macro parameter character #' in horizontal mode. l.39967 # # (The function nlme is in that package, and the package ! You can't use `macro parameter character #' in horizontal mode. l.39967 ## (The function nlme is in that package, and the package ! You can't use `macro parameter character #' in horizontal mode. l.39968 # # has a namespace, so the where= argument must be used ! You can't use `macro parameter character #' in horizontal mode. l.39968 ## has a namespace, so the where= argument must be used ! You can't use `macro parameter character #' in horizontal mode. l.39969 # # to get the right version of lm) ! You can't use `macro parameter character #' in horizontal mode. l.39969 ## to get the right version of lm) ! You can't use `macro parameter character #' in vertical mode. l.39973 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.39973 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39975 \end{ExampleCode} ! Missing } inserted. } l.39975 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39976 \end{Examples} ! Undefined control sequence. l.39977 \HeaderA {traceback}{Get and Print Call Stacks}{traceback} ! Undefined control sequence. l.39978 \aliasA {.Traceback}{traceback}{.Traceback} ! Undefined control sequence. l.39979 \aliasA {.traceback}{traceback}{.traceback} ! Undefined control sequence. l.39980 \keyword {programming}{traceback} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39982 \begin{Description} \relax ! Undefined control sequence. l.39983 By default \code {traceback()} prints the call stack of the last ! Undefined control sequence. l.39989 \code {.traceback()} now \emph{returns} the above call stack (and ! Undefined control sequence. l.39990 \code {traceback(x, *)} can be regarded as convenience function for ! Undefined control sequence. l.39991 printing the result of \code {.traceback(x)}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39992 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39994 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for e]xplanation. Type H for immediate help. ... l.39999 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40001 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40002 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40003 \item[\code{x}] \code{NULL} (default, meaning \code{.Traceback}), or an ! Undefined control sequence. l.40003 \item[\code{x}] \code {NULL} (default, meaning \code{.Traceback}), or an ! Undefined control sequence. l.40003 ...x}] \code{NULL} (default, meaning \code {.Traceback}), or an ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40006 \item[\code{max.lines}] The maximum number of lines to be printed ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40008 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40009 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40011 \begin{Details} \relax ! Undefined control sequence. l.40013 ...ed as a list of deparsed calls in \code {.Traceback}, which ! Undefined control sequence. l.40014 \code {traceback} prints in a user-friendly format. The stack of ! Undefined control sequence. l.40016 function calls (such as \code {\LinkA{.Call}{.Call}}): if profiling i... ! Undefined control sequence. l.40016 function calls (such as \code{\LinkA {.Call}{.Call}}): if profiling i... ! Undefined control sequence. l.40020 Errors which are caught \emph{via} \code {\LinkA{try}{try}} or ! Undefined control sequence. l.40020 ...hich are caught \emph{via} \code{\LinkA {try}{try}} or ! Undefined control sequence. l.40021 \code {\LinkA{tryCatch}{tryCatch}} do not generate a traceback, so wh... ! Undefined control sequence. l.40021 \code{\LinkA {tryCatch}{tryCatch}} do not generate a traceback, so wh... ! Undefined control sequence. l.40025 If \code {x} is numeric, then the current stack is printed, skipping ! Undefined control sequence. l.40026 \code {x} entries at the top of the stack. For Chapter 6 [143example, ! Undefined control sequence. l.40027 \code {options(error = function() traceback(2))} will print the stack ! Undefined control sequence. l.40028 ...f the error, skipping the call to \code {traceback()} ! Undefined control sequence. l.40031 Otherwise, \code {x} is assumed to be a list or pairlist of deparsed ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40033 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40035 \begin{Value} ! Undefined control sequence. l.40036 \code {traceback()} prints the deparsed call stack deepest call ! Undefined control sequence. l.40040 \code {max.lines}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40041 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40043 \begin{Section} {Warning} ! Undefined control sequence. l.40044 It is undocumented where \code {.Traceback} is stored nor that it is ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40046 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40048 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40052 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40054 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40055 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40058 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.40058 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.40059 foo(2) # gives a strange error ! You can't use `macro parameter character #' in horizontal mode. l.40061 # # End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.40061 ## End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.40062 # # 2: bar(2) ! You can't use `macro parameter character #' in h]orizontal mode. l.40062 ## 2: bar(2) ! You can't use `macro parameter character #' in horizontal mode. l.40063 # # 1: foo(2) ! You can't use `macro parameter character #' in horizontal mode. l.40063 ## 1: foo(2) ! You can't use `macro parameter character #' in horizontal mode. l.40065 # # Ah, this is the culprit ... ! You can't use `macro parameter character #' in horizontal mode. l.40065 ## Ah, this is the culprit ... ! You can't use `macro parameter character #' in vertical mode. l.40067 # # This will print the stack trace at the time of the error. ! You can't use `macro parameter character #' in vertical mode. l.40067 ## This will print the stack trace at the time of the error. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40069 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40070 \end{Examples} ! Undefined control sequence. l.40071 \HeaderA {tracemem}{Trace Copying of Objects}{tracemem} ! Undefined control sequence. l.40072 \aliasA {retracemem}{tracemem}{retracemem} ! Undefined control sequence. l.40073 \aliasA {untracemem}{tracemem}{untracemem} ! Undefined control sequence. l.40074 \keyword {utilities}{tracemem} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40076 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40080 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40082 \begin{Usage} [388] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40088 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40090 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40091 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40092 \item[\code{x}] An R object, not a function or environment or \code{... ! Undefined control sequence. l.40092 ... not a function or environment or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40093 \item[\code{previous}] A value as returned by \code{tracemem} or \co... ! Undefined control sequence. l.40093 ...previous}] A value as returned by \code {tracemem} or \code{retrac... ! Undefined control sequence. l.40093 ...as returned by \code{tracemem} or \code {retracemem}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40094 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40095 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40097 \begin{Details} \relax ! Undefined control sequence. l.40100 traced. \code {tracemem} and \code{untracemem} give errors when R is... ! Undefined control sequence. l.40100 traced. \code{tracemem} and \code {untracemem} give errors when R is... ! Undefined control sequence. l.40101 compiled with memory profiling; \code {retracemem} does not (so it ca... ! Undefined control sequence. l.40104 ...the CRAN macOS and Windows builds of \R {}. ! Undefined control sequence. l.40107 \code {duplicate} produces a message to standard output, as does type ! Undefined control sequence. l.40108 ...copying when passing arguments to \code {.C} or ! Undefined control sequence. l.40109 \code {.Fortran}. ! Undefined control sequence. l.40111 The message consists of the string \code {tracemem}, the identifying ! Undefined control se [144quence. l.40114 \code {retracemem()} is used to indicate that a variable should be ! Undefined control sequence. l.40117 The messages can be turned off with \code {\LinkA{tracingState}{traci... ! Undefined control sequence. l.40117 ...ges can be turned off with \code{\LinkA {tracingState}{tracingStat... ! Undefined control sequence. l.40120 \code {\LinkA{trace}{trace}} and it is not useful to trace \code{NULL}, ! Undefined control sequence. l.40120 \code{\LinkA {trace}{trace}} and it is not useful to trace \code{NULL}, ! Undefined control sequence. l.40120 ...e}} and it is not useful to trace \code {NULL}, ! Undefined control sequence. l.40124 These functions are \LinkA {primitive}{primitive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40125 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40127 \begin{Value} ! Undefined control sequence. l.40129 ...x enclosed in angle brackets), or \code {NULL} (invisibly). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40130 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40132 \begin{SeeAlso} \relax ! Undefined control sequence. l.40133 \code {\LinkA{capabilities}{capabilities}("profmem")} to see if this ... ! Undefined control sequence. l.40133 \code{\LinkA {capabilities}{capabilities}("profmem")} to see if this ... ! Undefined control sequence. l.40134 this build of \R {}. ! Undefined control sequence. l.40136 \code {\LinkA{trace}{trace}}, \code{\LinkA{Rprofmem}{Rprofmem}} ! Undefined control sequence. l.40136 \code{\LinkA {trace}{trace}}, \code{\LinkA{Rprofmem}{Rprofmem}} ! Undefined control sequence. l.40136 \code{\LinkA{trace}{trace}}, \code {\LinkA{Rprofmem}{Rprofmem}} ! Undefined control sequence. l.40136 \code{\LinkA{trace}{trace}}, \code{\LinkA {Rprofmem}{Rprofmem}} ! Undefined control sequence. l.40138 \url {https://developer.r-project.org/memory-profiling.html} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40139 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40141 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40142 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40143 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.40143 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.40146 # # b and a share memory ! You can't use `macro parameter character #' in horizontal mode. l.40146 ## b and a share memory ! You can't use `macro parameter character #' in vertical mode. l.40151 # # copying in lm: less than R <= 2.15.0 ! You can't use `macro parameter character #' in vertical mode. l.40151 ## copying in lm: less than R <= 2.15.0 ! You can't use `macro parameter character #' in vertical mode. l.40156 # # f is not a copy and is not traced ! You can't use `macro parameter character #' in vertical mode. l.40156 ## f is not a copy and is not traced ! You can't use `macro parameter character #' in horizontal mode. l.40159 # # indicate that f should be traced as a copy of d ! You can't use `macro parameter character #' in horizontal mode. l.40159 ## indicate that f should be traced as a copy of d ! You can't use `macro parameter character #' in vertical mode. l.40163 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.40163 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40164 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40165 \end{Examples} ! Undefined control sequence. l.40166 \HeaderA {transform}{Transform an Object, for Example a Data Frame}{t... ! Undefined control sequence. l.40167 \methaliasA {transform.data.frame}{transform}{transform.data.frame} ! Undefined control sequence. l.40168 \methaliasA {transform.default}{transform}{transform.default} ! Undefined control sequence. l.40169 \keyword {manip}{transform} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40171 \begin{Description} \relax ! Undefined control sequence. l.40172 \code {transform} is a generic function, which---at least ! Undefined control sequence. l.40174 data frames. \code {transform.default} converts its first argument to ! Undefined control sequence. l.40175 a data frame if possible and calls \code {transform.data.frame}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40176 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40178 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 40163--40179 \OT1/cmr/m/n/10 Frame-trans-form trans-form.data.frametransformtransform.data.f rame trans- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ]... l.40182 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40184 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40185 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40186 \item[\code{\_data}] The object to be transformed ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40187 \item[\code{...}] Further arguments of the form \code{tag=value} ! Undefined control sequence. l.40187 ....}] Further arguments of the form \code {tag=value} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40188 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40189 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40191 \begin{Details} \relax ! Undefined control sequence. l.40192 The \code {...} arguments to \code{transform.data.frame} are tagged ! Undefined control sequence. l.40192 The \code{...} arguments to \code {transform.data.frame} are tagged ! Undefined control sequence. l.40194 \code {\_data}. The tags are matched against \code{names(\_data)}, a... ! Undefined control sequence. l.40194 ...a}. The tags are matched against \code {names(\_data)}, and for ! Undefined control sequence. l.40196 \code {\_data}, and the others are appended to \code{\_data}. ! Undefined control sequence. l.40196 ...}, and the others are appended to \code {\_data}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40197 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40199 \begin{Value} ! Undefined control sequence. l.40200 The modified value of \code {\_data}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40201 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40203 \begin{Section} {Warning} ! Undefined control sequence. l.40207 argument \code {transform} can have unanticipated consequences. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40209 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40211 \begin{Note} \relax [389] [145 ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40214 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40216 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40218 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40220 \begin{SeeAlso} \relax ! Undefined control sequence. l.40221 \code {\LinkA{within}{within}} for a more flexible approach, ! Undefined control sequence. l.40221 \code{\LinkA {within}{within}} for a more flexible approach, ! Undefined control sequence. l.40222 \code {\LinkA{subset}{subset}}, ! Undefined control sequence. l.40222 \code{\LinkA {subset}{subset}}, ! Undefined control sequence. l.40223 \code {\LinkA{list}{list}}, ! Undefined control sequence. l.40223 \code{\LinkA {list}{list}}, ! Undefined control sequence. l.40224 \code {\LinkA{data.frame}{data.frame}} ! Undefined control sequence. l.40224 \code{\LinkA {data.frame}{data.frame}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40225 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40227 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40228 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40233 transform(Ozone, logOzone = log(Ozone)) # marginally interesting ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40235 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40236 \end{Examples} ! Undefined control sequence. l.40237 \HeaderA {Trig}{Trigonometric Functions}{Trig} ! Undefined control sequence. l.40238 \aliasA {acos}{Trig}{acos} ! Undefined control sequence. l.40239 \aliasA {arccos}{Trig}{arccos} ! Undefined control sequence. l.40240 \aliasA {arcsin}{Trig}{arcsin} ! Undefined control sequence. l.40241 \aliasA {arctan}{Trig}{arctan} ! Undefined control sequence. l.40242 \aliasA {asin}{Trig}{asin} ! Undefined control sequence. l.40243 \aliasA {atan}{Trig}{atan} ! Undefined control sequence. l.40244 \aliasA {atan2}{Trig}{atan2} ! Undefined control sequence. l.40245 \aliasA {cos}{Trig}{cos} ! Undefined control sequence. l.40246 \aliasA {cospi}{Trig}{cospi} ! Undefined control sequence. l.40247 \aliasA {sin}{Trig}{sin} ! Undefined control sequence. l.40248 \aliasA {sinpi}{Trig}{sinpi} ! Undefined control sequence. l.40249 \aliasA {tan}{Trig}{tan} ! Undefined control sequence. l.40250 \aliasA {tanpi}{Trig}{tanpi} ! Undefined control sequence. l.40251 \keyword {math}{Trig} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40253 \begin{Description} \relax ! Undefined control sequence. l.40258 \code {cospi(x)}, \code{sinpi(x)}, and \code{tanpi(x)}, compute ! Undefined control sequence. l.40258 \code{cospi(x)}, \code {sinpi(x)}, and \code{tanpi(x)}, compute ! Undefined control sequence. l.40258 ...e{cospi(x)}, \code{sinpi(x)}, and \code {tanpi(x)}, compute ! Undefined control sequence. l.40259 \code {cos(pi*x)}, \code{sin(pi*x)}, and \code{tan(pi*x)}. ! Undefined control sequence. l.40259 \code{cos(pi*x)}, \code {sin(pi*x)}, and \code{tan(pi*x)}. ! Undefined control sequence. l.40259 ...cos(pi*x)}, \code{sin(pi*x)}, and \code {tan(pi*x)}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40260 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40262 \begin{Usage} Underfull \hbox (badness 2573) in paragraph at lines 40258--40263 []\OT1/cmr/m/n/10 cospi(x), sinpi(x), and tanpi(x), com-pute cos(pi*x), sin(pi* x), and ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40277 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40279 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40280 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40281 \item[\code{x, y}] numeric or complex vectors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.40282 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40283 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40285 \begin{Details} \relax ! Undefined control sequence. l.40286 The arc-tangent of two arguments \code {atan2(y, x)} returns the angle ! Undefined control sequence. l.40287 ... and the vector from the origin to \eqn {(x, y)}{}, ! Undefined control sequence. l.40288 i.e., for positive arguments \code {atan2(y, x) == atan(y/x)}. ! Undefined control sequence. l.40291 right angle is \eqn {\pi/2}{}), and in `half-rotations' for ! Missing $ inserted. $ l.40291 right angle is \eqn{\pi /2}{}), and in `half-rotations' for ! Extra }, or forgotten $. l.40291 right angle is \eqn{\pi/2} {}), and in `half-rotations' for ! Undefined control sequence. l.40292 \code {cospi} etc. ! Missing $ inserted. $ l.40293 ! Undefined control sequence. l.40294 \code {cospi(x)}, \code{sinpi(x)}, and \code{tanpi(x)} are accurate ! Undefined control sequence. l.40294 \code{cospi(x)}, \code {sinpi(x)}, and \code{tanpi(x)} are accurate ! Undefined control sequence. l.40294 ...e{cospi(x)}, \code{sinpi(x)}, and \code {tanpi(x)} are accurate ! Undefined control sequence. l.40295 for \code {x} values which are multiples of a half. ! Undefined control sequence. l.40297 All except \code {atan2} are \LinkA{internal generic}{internal generi... ! Undefined control sequence. l.40297 All except \code{atan2} are \LinkA {internal generic}{internal generi... ! Undefined control sequence. l.40297 ...ernal generic}{internal generic} \LinkA {primitive}{primitive} ! Undefined control sequence. l.40299 \code {\LinkA{Math}{S3groupGeneric}} group generic. ! Undefined control sequence. l.40299 \code{\LinkA {Math}{S3groupGeneric}} group generic. Underfull \hbox (badness 2285) in paragraph at lines 40297--40300 []\OT1/cmr/m/n/10 All ex-cept atan2 are in-ter-nal gener-icin-ter-nal generic p rim-i-tiveprim-i- ! Undefined control sequence. l.40302 \code {c} for complex arguments) where available. (\code{cospi}, ! Undefined control sequence. l.40302 ...lex arguments) where available. (\code {cospi}, ! Undefined control sequence. l.40303 \code {sinpi}, and \code{tanpi} are part of a C11 extension ! Undefined control sequence. l.40303 \code{sinpi}, and \code {tanpi} are part of a C11 extension ! Undefined control sequence. l.40305 available call to \code {cos} \emph{etc} are used, with special cases ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40307 \end{Details} ! Missing } inserted. } l.40307 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40309 \begin{Value} ! Undefined control sequence. l.40310 \code {tanpi(0.5)} is \code{\LinkA{NaN}{NaN}}. Similarly for other i... ! Undefined control sequence. l.40310 \code{tanpi(0.5)} is \code {\LinkA{NaN}{NaN}}. Similarly for other i... ! Undefined control sequence. l.40310 \code{tanpi(0.5)} is \code{\LinkA {NaN}{NaN}}. Similarly for other i... ! Undefined control sequence. l.40311 with fractional part \code {0.5}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40312 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40314 \begin{Section} {Complex values} ! Undefined control sequence. l.40318 For \code {asin} and \code{acos}, there are two cuts, both along ! Undefined control sequence. l.40318 For \code{asin} and \code {acos}, there are two cuts, both along ! Undefined control sequence. l.40319 the real axis: \eqn {\left(-\infty, -1\right]}{} and ! Missing $ inserted. $ l.40319 the real axis: \eqn{\left (-\infty, -1\right]}{} and ! Extra }, or forgotten $. l.40319 ...al axis: \eqn{\left(-\infty, -1\right]} {} and ! Undefined control sequence. l.40320 \eqn {\left[1, \infty\right)}{}. ! Missing $ inserted. $ l.40321 Underfull \hbox (badness 1902) in paragraph at lines 40318--40321 []\OT1/cmr/m/n/10 For asin and acos, there are two cuts, both along the real ax is: ! Undefined control sequence. l.40322 For \code {atan} there are two cuts, both along the pure imaginary ! Undefined control sequence. l.40323 axis: \eqn {\left(-\infty i, -1i\right]}{} and ! Missing $ inserted. $ l.40323 axis: \eqn{\left (-\infty i, -1i\right]}{} and ! Extra }, or forgotten $. l.40323 axis: \eqn{\left(-\infty i, -1i\right]} {} and ! Undefined control sequence. l.40324 \eqn {\left[1i, \infty i\right)}{}. ! Missing $ inserted. $ l.40325 Underfull \hbox (badness 1584) in paragraph at lines 40322--40325 []\OT1/cmr/m/n/10 For atan there are two cuts, both along the pure imag-i-nary axis: [390] ! Undefined control sequence. l.40330 Complex arguments for \code {cospi}, \code{sinpi}, and \code{tanpi} ! Undefined control sequence. l.40330 Complex arguments for \code{cospi}, \code {sinpi}, and \code{tanpi} ! Undefined control sequence. l.40330 ... \code{cospi}, \code{sinpi}, and \code {tanpi} ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40333 \end{Section} ! Missing } inserted. } l.40333 \end{Section} ! Missing } inserted. } l.40333 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40335 \begin{Section} {S4 methods} ! Undefined control sequence. l.40336 All except \code {atan2} are S4 generic functions: methods can be def... ! Undefined control sequence. l.40338 \code {\LinkA{Math}{S4groupGeneric}} group generic. ! Undefined control sequence. l.40338 \code{\LinkA {Math}{S4groupGeneric}} group generic. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40339 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40341 \begin{References} \relax ! Undefined control sequence. l.40351 For \code {cospi}, \code{sinpi}, and \code{tanpi} the C11 extension ! Undefined control sequence. l.40351 For \code{cospi}, \code {sinpi}, and \code{tanpi} the C11 extension ! Undefined control sequence. l.40351 For \code{cospi}, \code{sinpi}, and \code {tanpi} the C11 extension ! Undefined control sequence. l.40353 \url {http://www.open-std.org/jtc1/sc22/wg14/www/docs/n1950.pdf}). ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40355 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40357 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40358 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40362 op <- options(digits = 4, width = 90) # for nice formatting ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40366 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40367 \end{Examples} ! Undefined control sequence. l.40368 \HeaderA {trimws}{Remove Leading/Trailing Whitespace}{trimws} ! Undefined control sequence. l.40369 \keyword {character}{trimws} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40371 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40373 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40375 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40379 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40381 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40382 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40383 \item[\code{x}] a character vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40384 \item[\code{which}] a character string specifying whether to remove ... ! Undefined control sequence. l.40386 (\code {"left"}) or trailing (\code{"right"}). Can be abbreviated. ! Undefined control sequence. l.40386 (\code{"left"}) or trailing (\code {"right"}). Can be abbreviated. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40387 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40388 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [146 l.40390 \begin{Details} \relax ! Undefined control sequence. l.40392 \code {[ \bsl{}t\bsl{}r\bsl{}n]} (space, horizontal tab, line feed, c... ! Undefined control sequence. l.40392 \code{[ \bsl {}t\bsl{}r\bsl{}n]} (space, horizontal tab, line feed, c... ! Undefined control sequence. l.40392 \code{[ \bsl{}t\bsl {}r\bsl{}n]} (space, horizontal tab, line feed, c... ! Undefined control sequence. l.40392 \code{[ \bsl{}t\bsl{}r\bsl {}n]} (space, horizontal tab, line feed, c... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40393 \end{Details} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40395 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40396 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40402 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40403 \end{Examples} ! Undefined control sequence. l.40404 \HeaderA {try}{Try an Expression Allowing Error Recovery}{try} ! Undefined control sequence. l.40405 \keyword {programming}{try} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40407 \begin{Description} \relax ! Undefined control sequence. l.40408 \code {try} is a wrapper to run an expression that might fail and allow ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40410 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40412 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40417 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40419 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual ]or LaTeX Companion for explanation. Type H for immediate help. ... l.40420 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40421 \item[\code{expr}] an \R{} expression to try. ! Undefined control sequence. l.40421 \item[\code{expr}] an \R {} expression to try. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40422 \item[\code{silent}] logical: should the report of error messages be ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40424 \item[\code{outFile}] a \LinkA{connection}{connection}, or a charact... ! Undefined control sequence. l.40424 \item[\code{outFile}] a \LinkA {connection}{connection}, or a charact... ! Undefined control sequence. l.40425 file to print to (via \code {\LinkA{cat}{cat}(*, file = outFile)}); ! Undefined control sequence. l.40425 file to print to (via \code{\LinkA {cat}{cat}(*, file = outFile)}); ! Undefined control sequence. l.40426 used only if \code {silent} is false, as by default. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40427 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40428 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40430 \begin{Details} \relax ! Undefined control sequence. l.40431 \code {try} evaluates an expression and traps any errors that occur ! Undefined control sequence. l.40433 message is printed to the \code {\LinkA{stderr}{stderr}} connection u... ! Undefined control sequence. l.40433 message is printed to the \code{\LinkA {stderr}{stderr}} connection u... ! Undefined control sequence. l.40434 \code {options("show.error.messages")} is false or ! Undefined control sequence. l.40435 the call includes \code {silent = TRUE}. The error message is also ! Undefined control sequence. l.40437 \code {geterrmessage}. (This should not be needed as the value returned ! Undefined control sequence. l.40440 \code {try} is implemented using \code{\LinkA{tryCatch}{tryCatch}}; for ! Undefined control sequence. l.40440 \code{try} is implemented using \code {\LinkA{tryCatch}{tryCatch}}; for ! Undefined control sequence. l.40440 ...{try} is implemented using \code{\LinkA {tryCatch}{tryCatch}}; for ! Undefined control sequence. l.40441 programming, instead of \code {try(expr, silent = TRUE)}, something like ! Undefined control sequence. l.40442 \code {tryCatch(expr, error = function(e) e)} (or other simple ! Undefined control sequence. l.40445 ... be useful to set the default for \code {outFile} to ! Undefined control sequence. l.40446 \code {\LinkA{stdout}{stdout}()}, i.e., \begin{alltt} options(try.ou... ! Undefined control sequence. l.40446 \code{\LinkA {stdout}{stdout}()}, i.e., \begin{alltt} options(try.ou... ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40446 ...stdout}{stdout}()}, i.e., \begin{alltt} options(try.outFile = st... ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40446 ...ons(try.outFile = stdout()) \end{alltt} ! Undefined control sequence. l.40448 instead of the default \code {\LinkA{stderr}{stderr}()}, ! Undefined control sequence. l.40448 instead of the default \code{\LinkA {stderr}{stderr}()}, ! Undefined control sequence. l.40449 notably when \code {try()} is used inside a \code{\LinkA{Sweave}{Swea... ! Undefined control sequence. l.40449 ...hen \code{try()} is used inside a \code {\LinkA{Sweave}{Sweave}} code ! Undefined control sequence. l.40449 ...de{try()} is used inside a \code{\LinkA {Sweave}{Sweave}} code ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40451 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40453 \begin{Value} ! Undefined control sequence. l.40454 The value of the expression if \code {expr} is evaluated without error, ! Undefined control sequence. l.40455 but an invisible object of class \code {"try-error"} containing the ! Undefined control sequence. l.40456 ...e, and the error condition as the \code {"condition"} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40458 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40460 \begin{SeeAlso} \relax ! Undefined control sequence. l.40461 \code {\LinkA{options}{options}} for setting error handlers and suppr... ! Undefined control sequence. l.40461 \code{\LinkA {options}{options}} for setting error handlers and suppr... ! Undefined control sequence. l.40463 \code {\LinkA{geterrmessage}{geterrmessage}} for retrieving the last ... ! Undefined control sequence. l.40463 \code{\LinkA {geterrmessage}{geterrmessage}} for retrieving the last ... ! Undefined control sequence. l.40464 The underlying \code {\LinkA{tryCatch}{tryCatch}} provides more flexi... ! Undefined control sequence. l.40464 The underlying \code{\LinkA {tryCatch}{tryCatch}} provides more flexi... [391] [147 ! Undefined control sequence. l.40467 \code {\LinkA{assertCondition}{assertCondition}} in package \pkg{tool... ! Undefined control sequence. l.40467 \code{\LinkA {assertCondition}{assertCondition}} in package \pkg{tool... ! Undefined control sequence. l.40467 ...tion}{assertCondition}} in package \pkg {tools} is related and ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40469 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40471 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40472 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40473 # # this example will not work correctly in example(try), but ! You can't use `macro parameter character #' in horizontal mode. l.40473 ## this example will not work correctly in example(try), but ! You can't use `macro parameter character #' in horizontal mode. l.40474 # # it does work correctly if pasted in ! You can't use `macro parameter character #' in horizontal mode. l.40474 ## it does work correctly if pasted in ! You can't use `macro parameter character #' in vertical mode. l.40480 # # alternatively, ! You can't use `macro parameter character #' in vertical mode. l.40480 ## alternatively, ! You can't use `macro parameter character #' in vertical mode. l.40483 # # run a simulation, keep only the results that worked. ! You can't use `macro parameter character #' in vertical mode. l.40483 ## run a simulation, keep only the results that worked. ! You can't use `macro parameter character #' in horizontal mode. l.40492 # # alternative 1 ! You can't use `macro parameter character #' in horizontal mode. l.40492 ## alternative 1 ! You can't use `macro parameter character #' in horizontal mode. l.40494 # # alternative 2 ! You can't use `macro parameter character #' in horizontal mode. l.40494 ## alternative 2 ! You can't use `macro parameter character #' in horizontal mode. l.40495 # # Not run: res <- vector("list", 100) ! You can't use `macro parameter character #' in horizontal mode. l.40495 ## Not run: res <- vector("list", 100) ! You can't use `macro parameter character #' in horizontal mode. l.40497 # # End(Not run) ! You can't use `macro parameter character #' in horizontal mode. l.40497 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40499 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40500 \end{Examples} ! Undefined control sequence. l.40501 \HeaderA {typeof}{The Type of an Object}{typeof} ! Undefined control sequence. l.40502 \aliasA {type}{typeof}{type} ! Undefined control sequence. l.40503 \keyword {attribute}{typeof} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40505 \begin{Description} \relax ! Undefined control sequence. l.40506 \code {typeof} determines the (\R{} internal) ! Undefined control sequence. l.40506 \code{typeof} determines the (\R {} internal) ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40508 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40510 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40514 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40516 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40517 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40518 \item[\code{x}] any \R{} object. ! Undefined control sequence. l.40518 \item[\code{x}] any \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40519 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40520 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40522 \begin{Value} ! Undefined control sequence. l.40524 \code {TypeTable} in \file{src/main/util.c}. Current values are ! Undefined control sequence. l.40524 \code{TypeTable} in \file {src/main/util.c}. Current values are ! Undefined control sequence. l.40525 the vector types \code {"logical"}, \code{"integer"}, \code{"double"}, ! Undefined control sequence. l.40525 the vector types \code{"logical"}, \code {"integer"}, \code{"double"}, ! Undefined control sequence. l.40525 ...ode{"logical"}, \code{"integer"}, \code {"double"}, ! Undefined control sequence. l.40526 \code {"complex"}, \co]de{"character"}, \code{"raw"} and \code{"list"}, ! Undefined control sequence. l.40526 \code{"complex"}, \code {"character"}, \code{"raw"} and \code{"list"}, ! Undefined control sequence. l.40526 ...e{"complex"}, \code{"character"}, \code {"raw"} and \code{"list"}, ! Undefined control sequence. l.40526 ...de{"character"}, \code{"raw"} and \code {"list"}, ! Undefined control sequence. l.40527 \code {"NULL"}, ! Undefined control sequence. l.40528 \code {"closure"} (function), \code{"special"} and \code{"builtin"} ! Undefined control sequence. l.40528 \code{"closure"} (function), \code {"special"} and \code{"builtin"} ! Undefined control sequence. l.40528 ... (function), \code{"special"} and \code {"builtin"} ! Undefined control sequence. l.40529 (basic functions and operators), \code {"environment"}, \code{"S4"} ! Undefined control sequence. l.40529 ...operators), \code{"environment"}, \code {"S4"} ! Undefined control sequence. l.40531 level (\code {"symbol"}, \code{"pairlist"}, \code{"promise"}, ! Undefined control sequence. l.40531 level (\code{"symbol"}, \code {"pairlist"}, \code{"promise"}, ! Undefined control sequence. l.40531 ...ode{"symbol"}, \code{"pairlist"}, \code {"promise"}, ! Undefined control sequence. l.40532 \code {"language"}, \code{"char"}, \code{"..."}, \code{"any"}, ! Undefined control sequence. l.40532 \code{"language"}, \code {"char"}, \code{"..."}, \code{"any"}, ! Undefined control sequence. l.40532 \code{"language"}, \code{"char"}, \code {"..."}, \code{"any"}, ! Undefined control sequence. l.40532 ...e"}, \code{"char"}, \code{"..."}, \code {"any"}, ! Undefined control sequence. l.40533 \code {"expression"}, \code{"externalptr"}, \code{"bytecode"} and ! Undefined control sequence. l.40533 \code{"expression"}, \code {"externalptr"}, \code{"bytecode"} and ! Undefined control sequence. l.40533 ...pression"}, \code{"externalptr"}, \code {"bytecode"} and ! Undefined control sequence. l.40534 \code {"weakref"}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40535 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40537 \begin{SeeAlso} \relax ! Undefined control sequence. l.40538 \code {\LinkA{mode}{mode}}, \code{\LinkA{storage.mode}{storage.mode}}. ! Undefined control sequence. l.40538 \code{\LinkA {mode}{mode}}, \code{\LinkA{storage.mode}{storage.mode}}. ! Undefined control sequence. l.40538 \code{\LinkA{mode}{mode}}, \code {\LinkA{storage.mode}{storage.mode}}. ! Undefined control sequence. l.40538 \code{\LinkA{mode}{mode}}, \code{\LinkA {storage.mode}{storage.mode}}. ! Undefined control sequence. l.40540 \code {\LinkA{isS4}{isS4}} to determine if an object has an S4 class. ! Undefined control sequence. l.40540 \code{\LinkA {isS4}{isS4}} to determine if an object has an S4 class. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40541 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40543 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40544 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40547 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40548 \end{Examples} ! Undefined control sequence. l.40549 \HeaderA {unique}{Extract Unique Elements}{unique} ! Undefined control sequence. l.40550 \methaliasA {unique.array}{unique}{unique.array} ! Undefined control sequence. l.40551 \methaliasA {unique.data.frame}{unique}{unique.data.frame} ! Undefined control sequence. l.40552 \methaliasA {unique.default}{unique}{unique.default} ! Undefined control sequence. l.40553 \methaliasA {unique.matrix}{unique}{unique.matrix} ! Undefined control sequence. l.40554 \keyword {manip}{unique} ! Undefined control sequence. l.40555 \keyword {logic}{unique} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40557 \begin{Description} \relax ! Undefined control sequence. l.40558 \code {unique} returns a vector, data frame or array like \code{x} ! Undefined control sequence. l.40558 ... vector, data frame or array like \code {x} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40560 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40562 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 40540--40563 \OT1/cmr/m/n/10 unique-Ex-tract Unique El-e-mentsunique unique.arrayuniqueuniqu e.array ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40578 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40580 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40581 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40582 \item[\code{x}] a vector or a data frame or an array or \code{NULL}. ! Undefined control sequence. l.40582 ...or or a data frame or an array or \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40583 \item[\code{incomparables}] a vector of values that cannot be compared. ! Undefined control sequence. l.40584 \code {FALSE} is a special value, meaning that all values can be ! Undefined control sequence. l.40587 \code {x}. [392 [148]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40588 \item[\code{fromLast}] logical indicating if duplication should be c... ! Undefined control sequence. l.40590 be kept. This only matters for \code {\LinkA{names}{names}} or ! Undefined control sequence. l.40590 ...pt. This only matters for \code{\LinkA {names}{names}} or ! Undefined control sequence. l.40591 \code {\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.40591 \code{\LinkA {dimnames}{dimnames}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40592 \item[\code{nmax}] the maximum number of unique items expected (grea... ! Undefined control sequence. l.40593 See \code {\LinkA{duplicated}{duplicated}}. ! Undefined control sequence. l.40593 See \code{\LinkA {duplicated}{duplicated}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40594 \item[\code{...}] arguments for particular methods. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40595 \item[\code{MARGIN}] the array margin to be held fixed: a single int... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40596 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40597 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40599 \begin{Details} \relax ! Undefined control sequence. l.40604 specified by \code {MARGIN} if the remaining dimensions are identical ! Undefined control sequence. l.40607 (with \code {MARGIN = 2}). ! Undefined control sequence. l.40609 Note that unlike the Unix command \code {uniq} this omits ! Undefined control sequence. l.40613 latter, see \code {\LinkA{rle}{rle}}). ! Undefined control sequence. l.40613 latter, see \code{\LinkA {rle}{rle}}). ! Undefined control sequence. l.40615 Missing values (\code {"\LinkA{NA}{NA}"}) are regarded as equal, nume... ! Undefined control sequence. l.40615 Missing values (\code{"\LinkA {NA}{NA}"}) are regarded as equal, nume... ! Undefined control sequence. l.40616 complex ones differing from \code {NaN}; character strings will be co... ! Undefined control sequence. l.40617 ...mmon encoding''; for details, see \code {\LinkA{match}{match}} (and ! Undefined control sequence. l.40617 ...coding''; for details, see \code{\LinkA {match}{match}} (and ! Undefined control sequence. l.40618 \code {\LinkA{duplicated}{duplicated}}) which use the same concept. ! Undefined control sequence. l.40618 \code{\LinkA {duplicated}{duplicated}}) which use the same concept. ! Undefined control sequence. l.40620 Values in \code {incomparables} will never be marked as duplicated. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40629 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40631 \begin{Value} ! Undefined control sequence. l.40632 ...or, an object of the same type of \code {x}, but with only ! Undefined control sequence. l.40640 A matrix or array is subsetted by \code {[, drop = FALSE]}, so ! Undefined control sequence. l.40642 ... the same number of dimensions as \code {x}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40643 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40645 \begin{Section} {Warning} ! Undefined control sequence. l.40647 are not atomic vectors (see \code {\LinkA{vector}{vector}}) or differ... ! Undefined control sequence. l.40647 are not atomic vectors (see \code{\LinkA {vector}{vector}}) or differ... ! Undefined control sequence. l.40648 ...tributes. In the worst case it is \eqn {O(n^2)}{}. ! Missing $ inserted. $ l.40648 ...tes. In the worst case it is \eqn{O(n^ 2)}{}. ! Extra }, or forgotten $. l.40648 .... In the worst case it is \eqn{O(n^2)} {}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40649 \end{Section} ! Missing $ inserted. $ l.40649 \end{Section} ! Missing } inserted. } l.40649 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40651 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40655 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40657 \begin{SeeAlso} \relax ! Undefined control sequence. l.40658 \code {\LinkA{duplicated}{duplicated}} which gives the indices of dup... ! Undefined control sequence. l.40658 \code{\LinkA {duplicated}{duplicated}} which gives the indices of dup... ! Undefined control sequence. l.40661 \code {\LinkA{rle}{rle}} which is the equivalent of the Unix \code{un... ! Undefined control sequence. l.40661 \code{\LinkA {rle}{rle}} which is the equivalent of the Unix \code{un... ! Undefined control sequence. l.40661 ...ich is the equivalent of the Unix \code {uniq -c} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40663 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40665 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40666 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40669 (u2 <- unique(x, fromLast = TRUE)) # different order ! You can't use `macro parameter character #' in horizontal mode. l.40673 # # approximately 100(1 - 1/e) = 63.21 ! You can't use `macro parameter character #' in horizontal mode. l.40673 ## approximately 100(1 - 1/e) = 63.21 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40676 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40677 \end{Examples} ! Undefined control sequence. l.40678 \HeaderA {unlink}{Delete Files and Directories}{unlink} ! Undefined control sequence. l.40679 \keyword {file}{unlink} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40681 \begin{Description} \relax ! Undefined control sequence. l.40682 \code {unlink} deletes the file(s) or directories specified by \code{x}. ! Undefined control sequence. l.40682 ...le(s) or directories specified by \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40683 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40685 \begin{Usage} [393] [149 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40689 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40691 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40692 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40693 \item[\code{x}] a character vector with the names of the file(s) or ! Undefined control sequence. l.40695 Wildcards (normally \file {*} and \file{?}) are allowed. ! Undefined control sequence. l.40695 Wildcards (normally \file{*} and \file {?}) are allowed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40696 \item[\code{recursive}] logical. Should directories be deleted recu... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40697 \item[\code{force}] logical. Should permissions be changed (if poss... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40699 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40700 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40702 \begin{Details} \relax ! Undefined control sequence. l.40703 Tilde-expansion (see \code {\LinkA{path.expand}{path.expand}}) is don... ! Undefined control sequence. l.40703 Tilde-expansion (see \code{\LinkA {path.expand}{path.expand}}) is don... ! Undefined control sequence. l.40703 ...expand}{path.expand}}) is done on \code {x}. ! Undefined control sequence. l.40705 If \code {recursive = FALSE} directories are not deleted, ! Undefined control sequence. l.40709 sockets. \code {unlink(x, recursive = TRUE)} ! Undefined control sequence. l.40713 \code {\LinkA{Sys.glob}{Sys.glob}}. Wildcards never match a leading ... ! Undefined control sequence. l.40713 \code{\LinkA {Sys.glob}{Sys.glob}}. Wildcards never matc]h a leading ... ! Undefined control sequence. l.40713 ... Wildcards never match a leading \file {.} in ! Undefined control sequence. l.40714 the filename, and files \file {.} and \file{..} will never be ! Undefined control sequence. l.40714 the filename, and files \file{.} and \file {..} will never be ! Undefined control sequence. l.40717 systems will support not only \file {*} and \file{?} but also character ! Undefined control sequence. l.40717 ...ill support not only \file{*} and \file {?} but also character ! Undefined control sequence. l.40718 classes such as \file {[a-z]} (see the \command{man} pages for the sy... ! Undefined control sequence. l.40718 ... such as \file{[a-z]} (see the \command {man} pages for the system ! Undefined control sequence. l.40719 call \code {glob} on your OS). The metacharacters \code{* ? [} can ! Undefined control sequence. l.40719 ... on your OS). The metacharacters \code {* ? [} can ! Undefined control sequence. l.40721 \code {unlink} to delete such files (see \code{\LinkA{file.remove}{fi... ! Undefined control sequence. l.40721 ...unlink} to delete such files (see \code {\LinkA{file.remove}{file.... ! Undefined control sequence. l.40721 ... to delete such files (see \code{\LinkA {file.remove}{file.remove}}), ! Undefined control sequence. l.40726 \code {recursive = TRUE} might not be supported on all platforms, whe... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40729 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40731 \begin{Value} ! Undefined control sequence. l.40732 \code {0} for success, \code{1} for failure, invisibly. ! Undefined control sequence. l.40732 \code{0} for success, \code {1} for failure, invisibly. ! Undefined control sequence. l.40734 to delete a directory if \code {recursive = FALSE}. However, missing ! Undefined control sequence. l.40735 values in \code {x} are regarded as failures. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40736 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40738 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40742 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40744 \begin{SeeAlso} \relax ! Undefined control sequence. l.40745 \code {\LinkA{file.remove}{file.remove}}. ! Undefined control sequence. l.40745 \code{\LinkA {file.remove}{file.remove}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40746 \end{SeeAlso} ! Undefined control sequence. l.40747 \HeaderA {unlist}{Flatten Lists}{unlist} ! Undefined control sequence. l.40748 \keyword {list}{unlist} ! Undefined control sequence. l.40749 \keyword {manip}{unlist} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40751 \begin{Description} \relax ! Undefined control sequence. l.40752 Given a list structure \code {x}, \code{unlist} simplifies it to ! Undefined control sequence. l.40752 Given a list structure \code{x}, \code {unlist} simplifies it to ! Undefined control sequence. l.40754 which occur in \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40755 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40757 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40761 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40763 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40764 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40765 \item[\code{x}] an \R{} object, typically a list or vector. ! Undefined control sequence. l.40765 \item[\code{x}] an \R {} object, typically a list or vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40766 \item[\code{recursive}] logical. Should unlisting be applied to list ! Undefined control sequence. l.40767 components of \code {x}? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40768 \item[\code{use.names}] logical. Should names be preserved? ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40769 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40770 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40772 \begin{Details} \relax ! Undefined control sequence. l.40773 \code {unlist} is generic: you can write methods to handle ! Undefined control sequence. l.40774 specific classes of objects, see \LinkA {InternalMethods}{InternalMet... ! Undefined control sequence. l.40775 and note, e.g., \code {\LinkA{relist}{relist}} with the \code{unlist}... ! Undefined control sequence. l.40775 and note, e.g., \code{\LinkA {relist}{relist}} with the \code{unlist}... ! Undefined control sequence. l.40775 ...{\LinkA{relist}{relist}} with the \code {unlist} method ! Undefined control sequence. l.40776 for \code {relistable} objects. ! Undefined control sequence. l.40778 If \code {recursive = FALSE}, the function will not recurse beyond the ! Undefined control sequence. l.40779 first level items in \code {x}. ! Undefined control sequence. l.40781 ...lly. If all non-list elements of \code {x} ! Undefined control sequence. l.40788 \code {x} can be an atomic vector, but then \code{unlist} does nothin... ! Undefined control sequence. l.40788 ...can be an atomic vector, but then \code {unlist} does nothing useful, ! Undefined control sequence. l.40791 By default, \code {unlist} tries to retain the naming ! Undefined control sequence. l.40792 information present in \code {x}. If \code{use.names = FALSE} all ! Undefined control sequence. l.40792 information present in \code{x}. If \code {use.names = FALSE} all [394] ! Undefined control sequence. l.40805 list. (The effect of unlisting an \code {\LinkA{lm}{lm}} fit is a li... ! Undefined control sequence. l.40805 ...The effect of unlisting an \code{\LinkA {lm}{lm}} fit is a list which ! Undefined control sequence. l.40807 Note that \code {unlist(x)} now returns \code{x} unchanged also for ! Undefined control sequence. l.40807 ...that \code{unlist(x)} now returns \code {x} unchanged also for ! Undefined control sequence. l.40808 non-vector \code {x}, instead of signalling an error in that case. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40809 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40811 \begin{Value} ! Undefined control sequence. l.40812 \code {NULL} or an expression or a vector of an appropriate mode to ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40819 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40821 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40825 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40827 \begin{SeeAlso} \relax ! Undefined control sequence. l.40828 \code {\LinkA{c}{c}}, \code{\LinkA{as.list}{as.list}}, \code{\LinkA{r... ! Undefined control sequence. l.40828 \code{\LinkA {c}{c}}, \code{\LinkA{as.list}{as.list}}, \code{\LinkA{r... ! Undefined control sequence. l.40828 \code{\LinkA{c}{c}}, \code {\LinkA{as.list}{as.list}}, \code{\LinkA{r... ! Undefined control sequence. l.40828 \code{\LinkA{c}{c}}, \code{\LinkA {as.list}{as.list}}, \code{\LinkA{r... ! Undefined control sequence. l.40828 ... \code{\LinkA{as.list}{as.list}}, \code {\LinkA{relist}{relist}}. ! Undefined control sequence. l.40828 ...\LinkA{as.list}{as.list}}, \code{\LinkA {relist}{relist}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40829 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40831 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40832 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.40841 unlist(l1) # a character vector ! You can't use `macro parameter character #' in horizontal mode. l.40843 unlist(l2) # remains a list ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40849 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40850 \end{Examples} ! Undefined control sequence. l.40851 \HeaderA {unname}{Remove \code{names} or \code{dimnames}}{unname} ! Undefined control sequence. l.40851 \HeaderA{unname}{Remove \code {names} or \code{dimnames}}{unname} ! Undefined control sequence. l.40851 ...rA{unname}{Remove \code{names} or \code {dimnames}}{unname} ! Undefined control sequence. l.40852 \keyword {utilities}{unname} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40854 \begin{Description} \relax ! Undefined control sequence. l.40855 Remove the \code {\LinkA{names}{names}} or \code{\LinkA{dimnames}{dim... ! Undefined control sequence. l.40855 Remove the \code{\LinkA {names}{names}} or \code{\LinkA{dimnames}{dim... ! Undefined control sequence. l.40855 ...he \code{\LinkA{names}{names}} or \code {\LinkA{dimnames}{dimnames... ! Undefined control sequence. l.40855 ...e{\LinkA{names}{names}} or \code{\LinkA {dimnames}{dimnames}} attr... ! Undefined control sequence. l.40856 an \R {} object. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40857 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40859 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40863 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40865 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40866 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40867 \item[\code{obj}] an \R{} object. ! Undefined control sequence. l.40867 \item[\code{obj}] an \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40868 \item[\code{force}] logical; if true, the \code{dimnames} (names and... ! Undefined control sequence. l.40868 ...ode{force}] logical; if true, the \code {dimnames} (names and row ! Undefined control sequence. l.40869 names) are removed even from \code {\LinkA{data.frame}{data.frame}}s. ! Undefined control sequence. l.40869 names) are removed even from \code{\LinkA {data.frame}{data.frame}}s. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40870 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40871 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40873 \begin{Value} ! Undefined control sequence. l.40874 Object as \code {obj} but without \code{\LinkA{names}{names}} or ! Undefined control sequence. l.40874 Object as \code{obj} but without \code {\LinkA{names}{names}} or ! Undefined control sequence. l.40874 ... as \code{obj} but without \code{\LinkA {names}{names}} or ! Undefined control sequence. l.40875 \code {\LinkA{dimnames}{dimnames}}. ! Undefined control sequence. l.40875 \code{\LinkA {dimnames}{dimnames}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40876 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40878 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40879 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.40882 # # Answering a question on R-help (14 Oct 1999): ! You can't use `macro parameter character #' in vertical mode. l.40882 ## Answering a question on R-help (14 Oct 1999): ! You can't use `macro parameter character #' in horizontal mode. l.40886 z[1:5] # [150 The names are larger than the data ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40888 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40889 \end{Examples} ! Undefined control sequence. l.40890 \HeaderA {UseMethod}{Class Methods}{UseMethod} ! Undefined control sequence. l.40891 \aliasA {.Class}{UseMethod}{.Class} ! Undefined control sequence. l.40892 \aliasA {.Generic}{UseMethod}{.Generic} ! Undefined control sequence. l.40893 \aliasA {.Method}{UseMethod}{.Method} ! Undefined control sequence. l.40894 \aliasA {NextMethod}{UseMethod}{NextMethod} ! Undefined control sequence. l.40895 \aliasA {S3Methods}{UseMethod}{S3Methods} ! Undefined control sequence. l.40896 \keyword {methods}{UseMethod} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40898 \begin{Description} \relax ! Undefined control sequence. l.40899 \R {} possesses a simple generic function mechanism which can be used... ! Undefined control sequence. l.40902 ...object supplied as an argument to \code {UseMethod} or \code{NextM... ! Undefined control sequence. l.40902 ...n argument to \code{UseMethod} or \code {NextMethod}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40903 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40905 \begin{Usage} Underfull \hbox (badness 7238) in paragraph at lines 40882--40906 \OT1/cmr/m/n/10 i-cUseMethod.Generic .Metho-d-UseMethod.Method NextMetho-d-UseM ethod- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40911 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40913 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40914 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40915 \item[\code{generic}] a character string naming a function (and not a ! Undefined control sequence. l.40916 built-in operator). Required for \code {UseMethod}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40917 \item[\code{object}] for \code{UseMethod}: an object whose class will ! Undefined control sequence. l.40917 \item[\code{object}] for \code {UseMethod}: an object whose class will ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40920 \item[\code{...}] further arguments to be passed to the next method. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40921 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40922 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40924 \begin{Details} \relax ! Undefined control sequence. l.40925 An \R {} object is a data object which has a \code{class} ! Undefined control sequence. l.40925 ...ject is a data object which has a \code {class} ! Undefined control sequence. l.40926 attribute (and this can be tested by \code {\LinkA{is.object}{is.obje... ! Undefined control sequence. l.40926 ...(and this can be tested by \code{\LinkA {is.object}{is.object}}). ! Undefined control sequence. l.40930 .... Matrices and arrays have class \code {"matrix"} ! Undefined control sequence. l.40931 or\code {"array"} followed by the class of the underlying vector. ! Undefined control sequence. l.40932 ... vectors have class the result of \code {\LinkA{mode}{mode}(x)}, e... ! Undefined control sequence. l.40932 ...s have class the result of \code{\LinkA {mode}{mode}(x)}, except ! Undefined control sequence. l.40933 that integer vectors have class \code {c("integer", "numeric")} and ! Undefined control sequence. l.40934 real vectors have class \code {c("double", "numeric")}. [395]] ! Undefined control sequence. l.40936 When a function calling \code {UseMethod("fun")} is applied to an ! Undefined control sequence. l.40937 object with class attribute \code {c("first", "second")}, the system ! Undefined control sequence. l.40938 searches for a function called \code {fun.first} and, if it finds it, ! Undefined control sequence. l.40940 called \code {fun.second} is tried. If no class name produces a ! Undefined control sequence. l.40941 suitable function, the function \code {fun.default} is used, if it ! Undefined control sequence. l.40944 Function \code {\LinkA{methods}{methods}} can be used to find out abo... ! Undefined control sequence. l.40944 Function \code{\LinkA {methods}{methods}} can be used to find out abo... ! Undefined control sequence. l.40947 \code {UseMethod} is a primitive function but uses standard argument ! Undefined control sequence. l.40949 are \LinkA {internal generic}{internal generic} and \LinkA{group gene... ! Undefined control sequence. l.40949 ...l generic}{internal generic} and \LinkA {group generic}{group gene... ! Undefined control sequence. l.40950 \code {UseMethod} currently dispatches on the implicit class even for ! Undefined control sequence. l.40954 \code {NextMethod} invokes the next method (determined by the ! Undefined control sequence. l.40956 ...gument to the function containing \code {NextMethod} if a ! Undefined control sequence. l.40957 ... was invoked directly). Normally \code {NextMethod} is used with ! Undefined control sequence. l.40958 only one argument, \code {generic}, but if further arguments are ! Undefined control sequence. l.40961 \code {NextMethod} should not be called except in methods called by ! Undefined control sequence. l.40962 \code {UseMethod} or from internal generics (see ! Undefined control sequence. l.40963 \LinkA {InternalGenerics}{InternalGenerics}). In particular it will ... ! Undefined control sequence. l.40964 anonymous calling functions (e.g., \code {get("print.ts")(AirPassenge... Underfull \hbox (badness 5756) in paragraph at lines 40961--40965 []\OT1/cmr/m/n/10 NextMethod should not be called ex-cept in meth-ods called by Underfull \hbox (badness 1189) in paragraph at lines 40961--40965 \OT1/cmr/m/n/10 In par-tic-u-lar it will not work in-side anony-mous call-ing f unc-tions (e.g., ! Undefined control sequence. l.40967 this, \code {UseMethod} and \code{NextMethod} search for methods in ! Undefined control sequence. l.40967 this, \code{UseMethod} and \code {NextMethod} search for methods in ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40975 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40977 \begin{Section} {Technical Details} ! Undefined control sequence. l.40981 \code {UseMethod} creates a new function call with ! Undefined control sequence. l.40983 defined before the call to \code {UseMethod} are retained (unlike S).... ! Undefined control sequence. l.40984 statements after the call to \code {UseMethod} will not be evaluated as ! Undefined control sequence. l.40985 \code {UseMethod} does not return. \code{UseMethod} can be called with ! Undefined control sequence. l.40985 \code{UseMethod} does not return. \code {UseMethod} can be called with ! Undefined control sequence. l.40989 enclosing function is used as \code {object}: unlike S this is the first ! Undefined control sequence. l.40993 \code {NextMethod} works by creating a special call frame for the next ! Undefined control sequence. l.40997 .... Any named arguments matched to \code {...} [396 [151]] ! Undefined control sequence. l.41006 The search for methods for \code {NextMethod} is slightly different ! Undefined control sequence. l.41007 from that for \code {UseMethod}. Finding no \code{fun.default} is not ! Undefined control sequence. l.41007 ...or \code{UseMethod}. Finding no \code {fun.default} is not ! Undefined control sequence. l.41009 itself. This is to pick up an \LinkA {internal generic}{internal gen... ! Undefined control sequence. l.41009 ...l generic}{internal generic} like \code {[} ! Undefined control sequence. l.41011 is a \LinkA {primitive}{primitive} function or a wrapper for a ! Undefined control sequence. l.41012 \code {\LinkA{.Internal}{.Internal}} function of the same name. (Whe... ! Undefined control sequence. l.41012 \code{\LinkA {.Internal}{.Internal}} function of the same name. (Whe... ! Undefined control sequence. l.41016 You will see objects such as \code {.Generic}, \code{.Method}, and ! Undefined control sequence. l.41016 ... objects such as \code{.Generic}, \code {.Method}, and ! Undefined control sequence. l.41017 \code {.Class} used in methods. These are set in the environment ! Undefined control sequence. l.41036 \code {.Generic} is a length-one character vector naming the generic ... ! Undefined control sequence. l.41038 \code {.Method} is a character vector (normally of length one) naming ! Undefined control sequence. l.41040 \code {\LinkA{Ops}{S3groupGeneric}} it is of length two.) ! Undefined control sequence. l.41040 \code{\LinkA {Ops}{S3groupGeneric}} it is of length two.) ! Undefined control sequence. l.41042 \code {.Class} is a character vector of classes used to find the next ! Undefined control sequence. l.41043 method. \code {NextMethod} adds an attribute \code{"previous"} to ! Undefined control sequence. l.41043 ...ode{NextMethod} adds an attribute \code {"previous"} to ! Undefined control sequence. l.41044 \code {.Class} giving the \code{.Class} last used for dispatch, and ! Undefined control sequence. l.41044 \code{.Class} giving the \code {.Class} last used for dispatch, and ! Undefined control sequence. l.41045 shifts \code {.Class} along to that used for dispatch. ! Undefined control sequence. l.41047 \code {.GenericCallEnv} and \code{.GenericDefEnv} are the environments ! Undefined control sequence. l.41047 \code{.GenericCallEnv} and \code {.GenericDefEnv} are the environments ! Undefined control sequence. l.41051 Note that \code {.Class} is set when the generic is called, and is ! Undefined control sequence. l.41053 ...ossible to change the method that \code {NextMethod} ! Undefined control sequence. l.41054 would dispatch by manipulating \code {.Class}, but `this is not ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41057 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41059 \begin{Note} \relax ! Undefined control sequence. l.41062 provided in the \pkg {methods} package. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41063 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41065 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41070 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41072 \begin{SeeAlso} \relax ! Undefined control sequence. l.41075 \code {\LinkA{methods}{methods}}, \code{\LinkA{class}{class}}, ! Undefined control sequence. l.41075 \code{\LinkA {methods}{methods}}, \code{\LinkA{class}{class}}, ! Undefined control sequence. l.41075 \code{\LinkA{methods}{methods}}, \code {\LinkA{class}{class}}, ! Undefined control sequence. l.41075 ...\LinkA{methods}{methods}}, \code{\LinkA {class}{class}}, ! Undefined control sequence. l.41076 \code {\LinkA{getS3method}{getS3method}}, \code{\LinkA{is.object}{is.... ! Undefined control sequence. l.41076 \code{\LinkA {getS3method}{getS3method}}, \code{\LinkA{is.object}{is.... ! Undefined control sequence. l.41076 ...LinkA{getS3method}{getS3method}}, \code {\LinkA{is.object}{is.obje... ! Undefined control sequence. l.41076 ...etS3method}{getS3method}}, \code{\LinkA {is.object}{is.object}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41077 \end{SeeAlso} ! Undefined control sequence. l.41078 \HeaderA {userhooks}{Functions to Get and Set Hooks for Load, Attach,... ! Undefined control sequence. l.41079 \aliasA {.userHooksEnv}{userhooks}{.userHooksEnv} ! Undefined control sequence. l.41080 \aliasA {getHook}{userhooks}{getHook} ! Undefined control sequence. l.41081 \aliasA {packageEvent}{userhooks}{packageEvent} ! Undefined control sequence. l.41082 \aliasA {setHook}{userhooks}{setHook} ! Undefined control sequence. l.41083 \keyword {utilities}{userhooks} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41085 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41088 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41090 \begin{Usage} Underfull \hbox (badness 1635) in paragraph at lines 41075--41091 \OT1/cmr/m/n/10 Un-load-user-hooks .user-Hook-sEn-vuser-hooks.userHooksEnv getH -ookuser-hooks- [397] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41099 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41101 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41102 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41103 \item[\code{hookName}] character string: the hook name ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41104 \item[\code{pkgname}] character string: the package/namespace name ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41105 \item[\code{event}] character string: an event for the package. Can... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41106 \item[\code{value}] A function or a list of functions, or for \code{... ! Undefined control sequence. l.41106 ...on or a list of functions, or for \code {action = "replace"}, \cod... ! Undefined control sequence. l.41106 ...or for \code{action = "replace"}, \code {NULL} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41107 \item[\code{action}] The action to be taken. Can be abbreviated. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41108 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41109 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41111 \begin{Details} \relax ! Undefined control sequence. l.41112 \code {setHook} provides a general mechanism for users to register ! Undefined control sequence. l.41116 \code {packageEvent}. ! Undefined control sequence. l.41118 To remove a hook completely, call \code {setHook(hookName, NULL, "rep... ! Undefined control sequence. l.41120 When an \R {} package is attached by \code{\LinkA{library}{library}} ... ! Undefined control sequence. l.41120 When an \R{} package is attached by \code {\LinkA{library}{library}} ... ! Undefined control sequence. l.41120 ...R{} package is attached by \code{\LinkA {library}{library}} or loa... ! Undefined control sequence. l.41122 \code {\LinkA{.onLoad}{.onLoad}} for a description of the package hoo... ! Undefined control sequence. l.41122 \code{\LinkA {.onLoad}{.onLoad}} for a description of the package hoo... ! Undefined control sequence. l.41124 code via the hooks provided by \code {setHook()}, functions which will ! Undefined control sequence. l.41125 be called as \code {funname(pkgname, pkgpath)} inside a ! Undefined control sequence. l.41126 \code {\LinkA{try}{try}} call. ! Undefined control sequence. l.41126 \code{\LinkA {try}{try}} call. ! Undefined control sequence. l.41135 \item The package's \code {\LinkA{.onLoad}{.onLoad}} function is run. ! Undefined control sequence. l.41135 \item The package's \code{\LinkA {.onLoad}{.onLoad}} function is run. ! Undefined control sequence. l.41137 \code {\LinkA{setLoadAction}{setLoadAction}} are run. ! Undefined control sequence. l.41137 \code{\LinkA {setLoadAction}{setLoadAction}} are run. ! Undefined control sequence. l.41139 \item The user's \code {"onLoad"} hook is run. ! Undefined control sequence. l.41141 \item The package's \code {\LinkA{.onAttach}{.onAttach}} function is ... ! Undefined control sequence. l.41141 \item The package's \code{\LinkA {.onAttach}{.onAttach}} function is ... ! Undefined control sequence. l.41143 \item The user's \code {"attach"} hook is run. ! Undefined control sequence. l.41152 \item The user's \code {"detach"} hook is run. ! Undefined control sequence. l.41153 \item The package's \code {\LinkA{.Last.lib}{.Last.lib}} function is ... ! Undefined control sequence. l.41153 \item The package's \code{\LinkA {.Last.lib}{.Last.lib}} function is ... [398] ! Undefined control sequence. l.41155 \item The user's \code {"onUnload"} hook is run. ! Undefined control sequence. l.41156 \item The package's \code {\LinkA{.onUnload}{.onUnload}} function is ... ! Undefined control sequence. l.41156 \item The package's \code{\LinkA {.onUnload}{.onUnload}} function is ... ! Undefined control sequence. l.41161 Note that when an \R {} session is finished, packages are not detache... ! Undefined control sequence. l.41171 by \code {getHook}, but the \code{"detach"} and \code{"onUnload"} hooks ! Undefined control sequence. l.41171 by \code{getHook}, but the \code {"detach"} and \code{"onUnload"} hooks ! Undefined control sequence. l.41171 ...ook}, but the \code{"detach"} and \code {"onUnload"} hooks ! Undefined control sequence. l.41175 ...oks are stored in the environment \code {.userHooksEnv} in the ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41177 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41179 \begin{Value} ! Undefined control sequence. l.41180 For \code {getHook} function, a list of functions (possibly empty). ! Undefined control sequence. l.41181 For \code {setHook} function, no return value. ! Undefined control sequence. l.41182 For \code {packageEvent}, the derived hook name (a character string). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41183 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41185 \begin{Note} \relax ! Undefined control sequence. l.41187 packages this can be problematic as \pkg {methods} is loaded and ! Undefined control sequence. l.41189 such as the example below is in the \file {.Rprofile} file, but that ! Undefined control sequence. l.41190 will not work for \pkg {methods}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41191 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41193 \begin{SeeAlso} \relax ! Undefined control sequence. l.41194 \code {\LinkA{library}{library}}, \code{\LinkA{detach}{detach}}, \cod... ! Undefined control sequence. l.41194 \code{\LinkA {library}{library}}, \code{\LinkA{detach}{detach}}, \cod... ! Undefined control sequence. l.41194 \code{\LinkA{library}{library}}, \code {\LinkA{detach}{detach}}, \cod... ! Undefined control sequence. l.41194 ...\LinkA{library}{library}}, \code{\LinkA {detach}{detach}}, \code{\... ! Undefined control sequence. l.41194 ...}, \code{\LinkA{detach}{detach}}, \code {\LinkA{loadNamespace}{loa... ! Undefined control sequence. l.41194 ...e{\LinkA{detach}{detach}}, \code{\LinkA {loadNamespace}{loadNamesp... ! Undefined control sequence. l.41196 See \code {\LinkA{::}{::}} ! Undefined control sequence. l.41196 See \code{\LinkA {::}{::}} ! Undefined control sequence. l.41199 ...oks may be added later: functions \code {\LinkA{plot.new}{plot.new... ! Undefined control sequence. l.41199 ... be added later: functions \code{\LinkA {plot.new}{plot.new}} and ! Undefined control sequence. l.41200 \code {\LinkA{persp}{persp}} already have them. ! Undefined control sequence. l.41200 \code{\LinkA {persp}{persp}} already have them. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41201 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41203 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41204 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41207 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41208 \end{Examples} ! Undefined control sequence. l.41209 \HeaderA {utf8Conversion}{Convert Integer Vectors to or from UTF-8-en... ! Undefined control sequence. l.41210 \aliasA {code point}{utf8Conversion}{code point} ! Undefined control sequence. l.41211 \aliasA {intToUtf8}{utf8Conversion}{intToUtf8} ! Undefined control sequence. l.41212 \aliasA {Unicode}{utf8Conversion}{Unicode} ! Undefined control sequence. l.41213 \aliasA {utf8ToInt}{utf8Conversion}{utf8ToInt} ! Undefined control sequence. l.41214 \keyword {character}{utf8Conversion} ! Undefined control sequence. l.41215 \keyword {utilities}{utf8Conversion} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41217 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41220 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation [152. Type H for immediate help. ... l.41222 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 41199--41223 \OT1/cmr/m/n/10 code pointutf8Conversioncode point int-ToUtf8utf8ConversionintT oUtf8 Underfull \hbox (badness 10000) in paragraph at lines 41199--41223 \OT1/cmr/m/n/10 Uni-codeutf8ConversionUnicode utf8ToIntutf8Conversionutf8ToInt char-ac- Underfull \hbox (badness 5091) in paragraph at lines 41199--41223 \OT1/cmr/m/n/10 terutf8Conversion util-i-tiesutf8Conversion Con-ver-sion of UTF -8 en-coded ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41227 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41229 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41230 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41231 \item[\code{x}] object to be converted. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41232 \item[\code{multiple}] logical: should the conversion be to a single ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41234 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41235 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41237 \begin{Details} \relax ! Undefined control sequence. l.41243 they run from \code {0} to \code{0x10FFFF} (with about 12\% being ! Undefined control sequence. l.41243 they run from \code{0} to \code {0x10FFFF} (with about 12\% being ! Undefined control sequence. l.41246 \code {intToUtf8} does not handle surrogate pairs (which should not ! Undefined control sequence. l.41248 \code {NA}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41249 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41251 \begin{Value} ! Undefined control sequence. l.41252 \code {utf8ToInt} converts a length-one character string encoded in ! Undefined control sequence. l.41255 greater than \code {0x10FFFF}: these are no longer regarded as valid by ! Undefined control sequence. l.41256 ...C and will in future be mapped to \code {NA}. Following ! Undefined control sequence. l.41258 `noncharacters' \code {0xFFFE} and \code{0xFFFF} are regarded as ! Undefined control sequence. l.41258 `noncharacters' \code{0xFFFE} and \code {0xFFFF} are regarded as ! Undefined control sequence. l.41259 valid as from \R {} 3.4.3.) [399]] ! Undefined control sequence. l.41261 \code {intToUtf8} converts a numeric vector of Unicode code points ! Undefined control sequence. l.41264 ...s above the maximum are mapped to \code {NA}. For a ! Undefined control sequence. l.41265 single character string \code {0} is silently omitted: otherwise ! Undefined control sequence. l.41266 \code {0} is mapped to \code{""}. The \code{\LinkA{Encoding}{Encodin... ! Undefined control sequence. l.41266 \code{0} is mapped to \code {""}. The \code{\LinkA{Encoding}{Encodin... ! Undefined control sequence. l.41266 ...e{0} is mapped to \code{""}. The \code {\LinkA{Encoding}{Encoding... ! Undefined control sequence. l.41266 ... mapped to \code{""}. The \code{\LinkA {Encoding}{Encoding}} of a ! Undefined control sequence. l.41267 non-\code {NA} return value is declared as \code{"UTF-8"}. ! Undefined control sequence. l.41267 ...e{NA} return value is declared as \code {"UTF-8"}. ! Undefined control sequence. l.41269 Invalid and \code {NA} inputs are mapped to \code{NA} output. ! Undefined control sequence. l.41269 ...nd \code{NA} inputs are mapped to \code {NA} output. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41270 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41272 \begin{References} \relax ! Undefined control sequence. l.41273 \url {https://tools.ietf.org/html/rfc3629}, the current standard for ... Underfull \hbox (badness 10000) in paragraph at lines 41269--41274 []\OT1/cmr/m/n/10 Invalid and NA in-puts are mapped to NA out-put. ! Undefined control sequence. l.41275 \url {http://www.unicode.org/versions/corrigendum9.html} for non-char... ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41276 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41278 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41279 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.41281 # # will only display in some locales and fonts ! You can't use `macro parameter character #' in vertical mode. l.41281 ## will only display in some locales and fonts ! You can't use `macro parameter character #' in horizontal mode. l.41282 intToUtf8(0x03B2L) # Greek beta ! Undefined control sequence. l.41285 utf8ToInt("\xfa \xb4\xbf\xbf\x9f") ! Undefined control sequence. l.41285 utf8ToInt("\xfa\xb 4\xbf\xbf\x9f") ! Undefined control sequence. l.41285 utf8ToInt("\xfa\xb4\xbf \ [153xbf\x9f") ! Undefined control sequence. l.41285 utf8ToInt("\xfa\xb4\xbf\xbf \x9f") ! Undefined control sequence. l.41285 utf8ToInt("\xfa\xb4\xbf\xbf\x 9f") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41286 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41287 \end{Examples} ! Undefined control sequence. l.41288 \HeaderA {validUTF8}{Check if a Character Vector is Validly Encoded}{... ! Undefined control sequence. l.41289 \aliasA {validEnc}{validUTF8}{validEnc} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41291 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41294 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41296 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41302 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41304 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41305 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41306 \item[\code{x}] A character vector. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41307 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41308 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41310 \begin{Details} \relax ! Undefined control sequence. l.41312 \code {\LinkA{grep}{grep}}. ! Undefined control sequence. l.41312 \code{\LinkA {grep}{grep}}. ! Undefined control sequence. l.41314 \code {validUTF8} ignores any marked encoding (see ! Undefined control sequence. l.41315 \code {\LinkA{Encoding}{Encoding}}) and so looks directly if the byte... ! Undefined control sequence. l.41315 \code{\LinkA {Encoding}{Encoding}}) and so looks directly if the byte... ! Undefined control sequence. l.41318 \code {validEnc} regards character strings as validly encoded unless ! Undefined control sequence. l.41319 ...s UTF-8 or they are unmarked and the \R {} ! Undefined control sequence. l.41322 \code {\LinkA{iconv}{iconv}} not all invalid inputs may be detected.) ! Undefined control sequence. l.41322 \code{\LinkA {iconv}{iconv}} not all invalid inputs may be detected.) ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41323 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41325 \begin{Value} ! Undefined control sequence. l.41326 ...ical vector of the same length as \code {x}. \code{NA} elements ! Undefined control sequence. l.41326 ...of the same length as \code{x}. \code {NA} elements ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41328 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41330 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41335 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41337 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41338 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41340 # # from example(text) ! You can't use `macro parameter character #' in horizontal mode. l.41340 ## from example(text) ! Undefined control sequence. l.41341 c("Jetz", "no", "chli", "z\xc 3\xbcrit\xc3\xbc\xc3\xbctsch:", ! Undefined control sequence. l.41341 c("Jetz", "no", "chli", "z\xc3\xbcrit \xc3\xbc\xc3\xbctsch:", ! Undefined control sequence. l.41341 c("Jetz", "no", "chli", "z\xc3\xbcrit\xc 3\xbc\xc3\xbctsch:", ! Undefined control sequence. l].41341 ...z", "no", "chli", "z\xc3\xbcrit\xc3\xbc \xc3\xbctsch:", ! Undefined control sequence. l.41341 ... "no", "chli", "z\xc3\xbcrit\xc3\xbc\xc 3\xbctsch:", ! Undefined control sequence. l.41341 ...hli", "z\xc3\xbcrit\xc3\xbc\xc3\xbctsch :", ! Undefined control sequence. l.41342 "(noch", "ein", "bi\xc 3\x9fchen", "Z\xc3\xbc", "deutsch)", ! Undefined control sequence. l.41342 "(noch", "ein", "bi\xc3\x 9fchen", "Z\xc3\xbc", "deutsch)", ! Undefined control sequence. l.41342 "(noch", "ein", "bi\xc3\x9fchen", "Z\xc 3\xbc", "deutsch)", ! Undefined control sequence. l.41342 ...h", "ein", "bi\xc3\x9fchen", "Z\xc3\xbc ", "deutsch)", ! You can't use `macro parameter character #' in horizontal mode. l.41343 # # from a CRAN check log ! You can't use `macro parameter character #' in horizontal mode. l.41343 ## from a CRAN check log ! Undefined control sequence. l.41344 "\xfa \xb4\xbf\xbf\x9f") ! Undefined control sequence. l.41344 "\xfa\xb 4\xbf\xbf\x9f") ! Undefined control sequence. l.41344 "\xfa\xb4\xbf \xbf\x9f") ! Undefined control sequence. l.41344 "\xfa\xb4\xbf\xbf \x9f") ! Undefined control sequence. l.41344 "\xfa\xb4\xbf\xbf\x 9f") ! You can't use `macro parameter character #' in horizontal mode. l.41346 validEnc(x) # depends on the locale ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41349 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41350 \end{Examples} ! Undefined control sequence. l.41351 \HeaderA {vector}{Vectors}{vector} ! Undefined control sequence. l.41352 \aliasA {as.vector}{vector}{as.vector} ! Undefined control sequence. l.41353 \methaliasA {as.vector.factor}{vector}{as.vector.factor} ! Undefined control sequence. l.41354 \aliasA {atomic}{vector}{atomic} ! Undefined control sequence. l.41355 \aliasA {is.vector}{vector}{is.vector} ! Undefined control sequence. l.41356 \keyword {classes}{vector} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41358 \begin{Description} \relax ! Undefined control sequence. l.41359 \code {vector} produces a vector of the given length and mode. ! Undefined control sequence. l.41361 \code {as.vector}, a generic, attempts to coerce its argument into a ! Undefined control sequence. l.41362 vector of mode \code {mode} (the default is to coerce to whichever ! Undefined control sequence. l.41366 \code {is.vector} returns \code{TRUE} if \code{x} is a vector of the ! Undefined control sequence. l.41366 \code{is.vector} returns \code {TRUE} if \code{x} is a vector of the ! Undefined control sequence. l.41366 ...is.vector} returns \code{TRUE} if \code {x} is a vector of the ! Undefined control sequence. l.41368 \code {FALSE} otherwise. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41369 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41371 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41377 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41379 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41380 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41381 \item[\code{mode}] character string naming an atomic mode or ! Undefined control sequence. l.41382 \code {"list"} or \code{"expression"} or (except for \code{vector}) ! Undefined control sequence. l.41382 \code{"list"} or \code {"expression"} or (except for \code{vector}) ! Undefined control sequence. l.41382 ...code{"expression"} or (except for \code {vector}) ! Undefined control sequence. l.41383 \code {"any"}. Currently, \code{is.vector()} allows any type (see ! Undefined control sequence. l.41383 \code{"any"}. Currently, \code {is.vector()} allows any type (see ! Undefined control sequence. l.41384 \code {\LinkA{typeof}{typeof}}) for \code{mode}, and when mode is not ! Undefined control sequence. l.41384 \code{\LinkA {typeof}{typeof}}) for \code{mode}, and when mode is not ! Undefined control sequence. l.41384 \code{\LinkA{typeof}{typeof}}) for \code {mode}, and when mode is not ! Undefined control sequence. l.41385 \code {"any"}, \code{is.vector(x, mode)} is almost the same as ! Undefined control sequence. l.41385 \code{"any"}, \code {is.vector(x, mode)} is almost the same as ! Undefined control sequence. l.41386 \code {typeof(x) == mode}. [400 [154] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41387 \item[\code{length}] a non-negative integer specifying the desired l... ! Undefined control sequence. l.41388 For a long vector, i.e., \code {length > .Machine\$integer.max}, it ! Undefined control sequence. l.41389 has to be of type \code {"double"}. Supplying an argument of length ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41391 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.41391 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41392 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41393 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41395 \begin{Details} \relax ! Undefined control sequence. l.41396 The atomic modes are \code {"logical"}, \code{"integer"}, ! Undefined control sequence. l.41396 ...tomic modes are \code{"logical"}, \code {"integer"}, ! Undefined control sequence. l.41397 \code {"numeric"} (synonym \code{"double"}), \code{"complex"}, ! Undefined control sequence. l.41397 \code{"numeric"} (synonym \code {"double"}), \code{"complex"}, ! Undefined control sequence. l.41397 ...eric"} (synonym \code{"double"}), \code {"complex"}, ! Undefined control sequence. l.41398 \code {"character"} and \code{"raw"}. ! Undefined control sequence. l.41398 \code{"character"} and \code {"raw"}. ! Undefined control sequence. l.41400 If \code {mode = "any"}, \code{is.vector} may return \code{TRUE} for ! Undefined control sequence. l.41400 If \code{mode = "any"}, \code {is.vector} may return \code{TRUE} for ! Undefined control sequence. l.41400 ...ny"}, \code{is.vector} may return \code {TRUE} for ! Undefined control sequence. l.41401 the atomic modes, \code {\LinkA{list}{list}} and \code{\LinkA{express... ! Undefined control sequence. l.41401 the atomic modes, \code{\LinkA {list}{list}} and \code{\LinkA{express... ! Undefined control sequence. l.41401 ...es, \code{\LinkA{list}{list}} and \code {\LinkA{expression}{expres... ! Undefined control sequence. l.41401 ...de{\LinkA{list}{list}} and \code{\LinkA {expression}{expression}}. ! Undefined control sequence. l.41402 For any \code {mode}, it will return \code{FALSE} if \code{x} has any ! Undefined control sequence. l.41402 For any \code{mode}, it will re]turn \code {FALSE} if \code{x} has any ! Undefined control sequence. l.41402 ...}, it will return \code{FALSE} if \code {x} has any ! Undefined control sequence. l.41404 hand, \code {as.vector} removes \emph{all} attributes including names ! Undefined control sequence. l.41405 ...tomic mode (but not those of mode \code {"list"} nor ! Undefined control sequence. l.41406 \code {"expression"}). ! Undefined control sequence. l.41408 ...t factors are \emph{not} vectors; \code {is.vector} returns ! Undefined control sequence. l.41409 \code {FALSE} and \code{as.vector} converts a factor to a character ! Undefined control sequence. l.41409 \code{FALSE} and \code {as.vector} converts a factor to a character ! Undefined control sequence. l.41410 vector for \code {mode = "any"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41411 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41413 \begin{Value} ! Undefined control sequence. l.41414 For \code {vector}, a vector of the given length and mode. Logical ! Undefined control sequence. l.41415 vector elements are initialized to \code {FALSE}, numeric vector ! Undefined control sequence. l.41416 elements to \code {0}, character vector elements to \code{""}, raw ! Undefined control sequence. l.41416 ...{0}, character vector elements to \code {""}, raw ! Undefined control sequence. l.41417 vector elements to \code {nul} bytes and list/expression elements to ! Undefined control sequence. l.41418 \code {NULL}. ! Undefined control sequence. l.41420 For \code {as.vector}, a vector (atomic or of type list or expression). ! Undefined control sequence. l.41423 input types and 12 values of \code {type}: the details of most ! Undefined control sequence. l.41426 For \code {is.vector}, \code{TRUE} or \code{FALSE}. ! Undefined control sequence. l.41426 For \code{is.vector}, \code {TRUE} or \code{FALSE}. ! Undefined control sequence. l.41426 For \code{is.vector}, \code{TRUE} or \code {FALSE}. ! Undefined control sequence. l.41427 \code {is.vector(x, mode = "numeric")} can be true for vectors of types ! Undefined control sequence. l.41428 \code {"integer"} or \code{"double"} whereas \code{is.vector(x, mode = ! Undefined control sequence. l.41428 \code{"integer"} or \code {"double"} whereas \code{is.vector(x, mode = ! Undefined control sequence. l.41428 ...eger"} or \code{"double"} whereas \code {is.vector(x, mode = ! Undefined control sequence. l.41429 ...an only be true for those of type \code {"double"}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41430 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41432 \begin{Section} {Methods for \code{as.vector()}} ! Undefined control sequence. l.41432 \begin{Section}{Methods for \code {as.vector()}} ! Undefined control sequence. l.41433 Writers of methods for \code {as.vector} need to take care to ! Undefined control sequence. l.41437 \item Argument \code {mode} can be \code{"any"}, any of the atomic ! Undefined control sequence. l.41437 \item Argument \code{mode} can be \code {"any"}, any of the atomic ! Undefined control sequence. l.41438 modes, \code {"list"}, \code{"expression"}, \code{"symbol"}, ! Undefined control sequence. l.41438 modes, \code{"list"}, \code {"expression"}, \code{"symbol"}, ! Undefined control sequence. l.41438 ...ode{"list"}, \code{"expression"}, \code {"symbol"}, ! Undefined control sequence. l.41439 \code {"pairlist"} or one of the aliases \code{"double"} and \code{"n... ! Undefined control sequence. l.41439 ..."pairlist"} or one of the aliases \code {"double"} and \code{"name"}. ! Undefined control sequence. l.41439 ...f the aliases \code{"double"} and \code {"name"}. ! Undefined control sequence. l.41442 \code {mode = "any"} this means an atomic vector or list. ! Undefined control sequence. \code l.41448 \item \code {is.vector(as.vector(x, m), m)} should be true for any ! Undefined control sequence. l.41449 mode \code {m}, including the default \code{"any"}. ! Undefined control sequence. l.41449 mode \code{m}, including the default \code {"any"}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41453 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41455 \begin{Note} \relax ! Undefined control sequence. l.41456 \code {as.vector} and \code{is.vector} are quite distinct from the ! Undefined control sequence. l.41456 \code{as.vector} and \code {is.vector} are quite distinct from the ! Undefined control sequence. l.41457 meaning of the formal class \code {"vector"} in the \pkg{methods} ! Undefined control sequence. l.41457 ...ormal class \code{"vector"} in the \pkg {methods} ! Undefined control sequence. l.41458 package, and hence \code {\LinkA{as}{as}(x, "vector")} and ! Undefined control sequence. l.41458 package, and hence \code{\LinkA {as}{as}(x, "vector")} and ! Undefined control sequence. l.41459 \code {\LinkA{is}{is}(x, "vector")}. ! Undefined control sequence. l.41459 \code{\LinkA {is}{is}(x, "vector")}. ! Undefined control sequence. l.41461 Note that \code {as.vector(x)} is not necessarily a null operation if ! Undefined control sequence. l.41462 \code {is.vector(x)} is true: any names will be removed from an atomic ! Undefined control sequence. l.41465 Non-vector \code {mode}s \code{"symbol"} (synonym \code{"name"}) and ! Undefined control sequence. l.41465 Non-vector \code{mode}s \code {"symbol"} (synonym \code{"name"}) and ! Undefined control sequence. l.41465 ...e{mode}s \code{"symbol"} (synonym \code {"name"}) and ! Undefined control sequence. l.41466 \code {"pairlist"} are accepted but have long been undocumented: they ! Undefined control sequence. l.41467 are used to implement \code {\LinkA{as.name}{as.name}} and ! Undefined control sequence. l.41467 are used to implement \code{\LinkA {as.name}{as.name}} and ! Undefined control sequence. l.41468 \code {\LinkA{as.pairlist}{as.pairlist}}, and those functions should ... ! Undefined control sequence. l.41468 \code{\LinkA {as.pairlist}{as.pairlist}}, and those functions should ... ! Undefined control sequence. l.41470 \code {mode}s: see the help for the preferred forms. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41471 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41473 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41477 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41479 \begin{SeeAlso} \relax ! Undefined control sequence. l.41480 \code {\LinkA{c}{c}}, \code{\LinkA{is.numeric}{is.numeric}}, \code{\L... ! Undefined control sequence. l.41480 \code{\LinkA {c}{c}}, \code{\LinkA{is.numeric}{is.numeric}}, \code{\L... ! Undefined control sequence. l.41480 \code{\LinkA{c}{c}}, \code {\LinkA{is.numeric}{is.numeric}}, \code{\L... ! Undefined control sequence. l.41480 \code{\LinkA{c}{c}}, \code{\LinkA {is.numeric}{is.numeric}}, \code{\L... ! Undefined control sequence. l.41480 ...{\LinkA{is.numeric}{is.numeric}}, \code {\LinkA{is.list}{is.list}}... ! Undefined control sequence. l.41480 ...{is.numeric}{is.numeric}}, \code{\LinkA {is.list}{is.list}}, etc. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41481 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41483 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41484 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41486 # # Error: ! You can't use `macro parameter character #' in horizontal mode. l.41486 ## Error: ! You can't use `macro parameter character #' in horizontal mode. l.41492 all.equal(x, as.vector(x)) # # FALSE ! You can't use `macro parameter character #' in horizontal mode. l.41492 all.equal(x, as.vector(x)) ## FALSE ! You can't use `macro parameter character #' in vertical mode. l.41495 # ##-- All the following are TRUE: ! You can't use `macro parameter character #' in vertical mode. l.41495 ## #-- All the following are TRUE: ! You can't use `macro parameter character #' in vertical mode. l.41495 ### -- All the following are TRUE: [401] [155 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41501 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41502 \end{Examples} ! Undefined control sequence. l.41503 \HeaderA {Vectorize}{Vectorize a Scalar Function}{Vectorize} ! Undefined control sequence. l.41504 \keyword {manip}{Vectorize} ! Undefined control sequence. l.41505 \keyword {utilities}{Vectorize} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41507 \begin{Description} \relax ! Undefined control sequence. l.41508 \code {Vectorize} creates a function wrapper that vectorizes the ! Undefined control sequence. l.41509 action of its argument \code {FUN}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41510 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41512 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41517 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41519 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41520 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41521 \item[\code{FUN}] function to apply, found via \code{\LinkA{match.fu... ! Undefined control sequence. l.41521 ...UN}] function to apply, found via \code {\LinkA{match.fun}{match.f... ! Undefined control sequence. l.41521 ...nction to apply, found via \code{\LinkA {match.fun}{match.fun}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41522 \item[\code{vectorize.args}] a character vector of arguments which s... ! Undefined control sequence. l.41523 ...ed. Defaults to all arguments of \code ] {FUN}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41524 \item[\code{SIMPLIFY}] logical or character string; attempt to reduc... ! Undefined control sequence. l.41526 the \code {simplify} argument of \code{\LinkA{sapply}{sapply}}. ! Undefined control sequence. l.41526 the \code{simplify} argument of \code {\LinkA{sapply}{sapply}}. ! Undefined control sequence. l.41526 ...code{simplify} argument of \code{\LinkA {sapply}{sapply}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41527 \item[\code{USE.NAMES}] logical; use names if the first \dots argume... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41530 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41531 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41533 \begin{Details} \relax ! Undefined control sequence. l.41534 The arguments named in the \code {vectorize.args} argument to ! Undefined control sequence. l.41535 \code {Vectorize} are the arguments passed in the \code{...} list to ! Undefined control sequence. l.41535 ...} are the arguments passed in the \code {...} list to ! Undefined control sequence. l.41536 \code {\LinkA{mapply}{mapply}}. Only those that are actually passed ... ! Undefined control sequence. l.41536 \code{\LinkA {mapply}{mapply}}. Only those that are actually passed ... ! Undefined control sequence. l.41539 \code {Vectorize} cannot be used with primitive functions as they do ! Undefined control sequence. l.41540 not have a value for \code {\LinkA{formals}{formals}}. ! Undefined control sequence. l.41540 not have a value for \code{\LinkA {formals}{formals}}. ! Undefined control sequence. l.41543 \code {FUN}, \code{vectorize.args}, \code{SIMPLIFY} or ! Undefined control sequence. l.41543 \code{FUN}, \code {vectorize.args}, \code{SIMPLIFY} or ! Undefined control sequence. l.41543 \code{FUN}, \code{vectorize.args}, \code {SIMPLIFY} or ! Undefined control sequence. l.41544 \code {USE.NAMES}, as they will interfere with the \code{Vectorize} ! Undefined control sequence. l.41544 ..., as they will interfere with the \code {Vectorize} ! Undefined control sequence. l.41545 arguments. See the \code {combn} example below for a workaround. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41546 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41548 \begin{Value} ! Undefined control sequence. l.41549 ...nction with the same arguments as \code {FUN}, wrapping a call to ! Undefined control sequence. l.41550 \code {\LinkA{mapply}{mapply}}. ! Undefined control sequence. l.41550 \code{\LinkA {mapply}{mapply}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41551 \end{Value} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41553 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41554 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41555 # We use rep.int as rep is primitive ! You can't use `macro parameter character #' in horizontal mode. l.41567 vf(y = 1:3) # Only vectorizes y, not x ! You can't use `macro parameter character #' in vertical mode. l.41569 # Nonlinear regression contour plot, based on nls() example ! Missing $ inserted. $ l.41573 sum((resp - pred)^ 2 / pred) ! Extra }, or forgotten $. l.41574 } ! Missing $ inserted. $ l.41577 Underfull \hbox (badness 1107) in paragraph at lines 41569--41577 \OT1/cmr/m/n/10 SS <- func-tion(Vm, K, resp, conc) pred <- (Vm * conc)/(K + co nc) ! Missing $ inserted. $ l.41581 contour(Vm, K, SSvals, levels = (1:10)^ 2, xlab = "Vm", ylab = "K") ! Missing $ inserted. $ l.41582 ! You can't use `macro parameter character #' in vertical mode. l.41583 # combn() has an argument named FUN ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41588 \end{ExampleCode} ! Missing } inserted. } l.41588 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41589 \end{Examples} ! Undefined control sequence. l.41590 \HeaderA {warning}{Warning Messages}{warning} ! Undefined control sequence. l.41591 \aliasA {suppressWarnings}{warning}{suppressWarnings} ! Undefined control sequence. l.41592 \keyword {programming}{warning} ! Undefined control sequence. l.41593 \keyword {error}{warning} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41595 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41598 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41600 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41606 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41608 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41609 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41610 \item[\code{...}] zero or more objects which can be coerced to chara... [402 Warning: unbalanced parentheses in @def...] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41613 \item[\code{call.}] logical, indicating if the call should become pa... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41615 \item[\code{immediate.}] logical, indicating if the call should be o... ! Undefined control sequence. l.41616 immediately, even if \code {\LinkA{getOption}{getOption}("warn") <= 0}. ! Undefined control sequence. l.41616 immediately, even if \code{\LinkA {getOption}{getOption}("warn") <= 0}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41617 \item[\code{noBreaks.}] logical, indicating as far as possible the m... ! Undefined control sequence. l.41618 be output as a single line when \code {options(warn = 1)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41619 \item[\code{expr}] expression to evaluate. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41620 \item[\code{domain}] see \code{\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.41620 \item[\code{domain}] see \code {\LinkA{gettext}{gettext}}. If \code{... ! Undefined control sequence. l.41620 \item[\code{domain}] see \code{\LinkA {gettext}{gettext}}. If \code{... ! Undefined control sequence. l.41620 ...de{\LinkA{gettext}{gettext}}. If \code {NA}, messages will ! Undefined control sequence. l.41621 ... translated, see also the note in \code {\LinkA{stop}{stop}}. ! Undefined control sequence. l.41621 ...ated, see also the note in \code{\LinkA {stop}{stop}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41622 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41623 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41625 \begin{Details} \relax ! Undefined control sequence. l.41627 \code {\LinkA{options}{options}("warn")} and on handlers established ... ! Undefined co [156ntrol sequence. l.41627 \code{\LinkA {options}{options}("warn")} and on handlers established ... ! Undefined control sequence. l.41633 \code {warning} signals a warning condition by (effectively) calling ! Undefined control sequence. l.41634 \code {signalCondition}. If there are no handlers or if all handlers ! Undefined control sequence. l.41635 return, then the value of \code {warn = \LinkA{getOption}{getOption}(... ! Undefined control sequence. l.41635 ..., then the value of \code{warn = \LinkA {getOption}{getOption}("wa... ! Undefined control sequence. l.41636 ...rmine the appropriate action. If \code {warn} is negative ! Undefined control sequence. l.41640 errors. Calling \code {warning(immediate. = TRUE)} turns \code{warn <= ! Undefined control sequence. l.41640 ...warning(immediate. = TRUE)} turns \code {warn <= ! Undefined control sequence. l.41641 0} into \code {warn = 1} for this call only. ! Undefined control sequence. l.41644 If \code {warn} is zero (the default), a read-only variable ! Undefined control sequence. l.41645 \code {last.warning} is created. It contains the warnings which can be ! Undefined control sequence. l.41646 printed via a call to \code {\LinkA{warnings}{warnings}}. ! Undefined control sequence. l.41646 printed via a call to \code{\LinkA {warnings}{warnings}}. ! Undefined control sequence. l.41648 Warnings will be truncated to \code {\LinkA{getOption}{getOption}("wa... ! Undefined control sequence. l.41648 Warnings will be truncated to \code{\LinkA {getOption}{getOption}("wa... ! Undefined control sequence. l.41649 ...cters, default 1000, indicated by \code {[... truncated]}. ! Undefined control sequence. l.41651 ...the warning is being processed, a \code {muffleWarning} restart ! Undefined control sequence. l.41652 ... If this restart is invoked with \code {invokeRestart}, ! Undefined control sequence. l.41653 then \code {warning} returns immediately. ! Undefined control sequence. l.41655 ...o coerce other types of inputs to \code {warning} ! Undefined control sequence. l.41658 \code {suppressWarnings} evaluates its expression in a context that ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41660 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41662 \begin{Value} ! Undefined control sequence. l.41663 The warning message as \code {\LinkA{character}{character}} string, i... ! Undefined control sequence. l.41663 The warning message as \code{\LinkA {character}{character}} string, i... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41664 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41666 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41670 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41672 \begin{SeeAlso} \relax ! Undefined control sequence. l.41673 \code {\LinkA{stop}{stop}} for fatal errors, ! Undefined control sequence. l.41673 \code{\LinkA {stop}{stop}} for fatal errors, ! Undefined control sequence. l.41674 \code {\LinkA{message}{message}} for diagnostic messages, ! Undefined control sequence. l.41674 \code{\LinkA {message}{message}} for diagnostic messages, ! Undefined control sequence. l.41675 \code {\LinkA{warnings}{warnings}}, ! Undefined control sequence. l.41675 \code{\LinkA {warnings}{warnings}}, ! Undefined control sequence. l.41676 and \code {\LinkA{options}{options}} with argument \code{warn=}. ! Undefined control sequence. l.41676 and \code{\LinkA {options}{options}} with argument \code{warn=}. ! Undefined control sequence. l.41676 ...{options}{options}} with argument \code {warn=}. ! Undefined control sequence. l.41678 \code {\LinkA{gettext}{gettext}} for the mechanisms for the automated... ! Undefined control sequence. l.41678 \code{\LinkA {gettext}{gettext}} for the mechanisms for the automated... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41680 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41682 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41683 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41686 testit() # # shows call ! You can't use `macro parameter character #' in horizontal mode. l.41686 testit() ## shows call ! You can't use `macro parameter character #' in horizontal mode. l.41688 testit() # # no call ! You can't use `macro parameter character #' in horizontal mode. l.41688 testit() ## no call ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41691 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41692 \end{Examples} ! Undefined control sequence. l.41693 \HeaderA {warnings}{Print Warning Messages}{warnings} ! Undefined control sequence. l.41694 \aliasA {c.warnings}{warnings}{c.warnings} ! Undefined control sequence. l.41695 \aliasA {duplicated.warnings}{warnings}{duplicated.warnings} ! Undefined control sequence. l.41696 \aliasA {last.warning}{warnings}{last.warning} ! Undefined control sequence. l.41697 \aliasA {print.warnings}{warnings}{print.warnings} ! Undefined control sequence. l.41698 \aliasA {unique.warnings}{warnings}{unique.warnings} ! Undefined control sequence. l.41699 \aliasA {[.warnings}{warnings}{[.warnings} ! Undefined control sequence. l.41700 \keyword {programming}{warnings} ! Undefined control sequence. l.41701 \keyword {error}{warnings} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41703 \begin{Description} \relax ! Undefined control sequence. l.41704 \code {warnings} and its \code{print} method print the ! Undefined control sequence. l.41704 \code{warnings} and its \code {print} method print the ! Undefined control sequence. l.41705 variable \code {last.warning} in a pleasing form. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41706 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41708 \begin{Usage} Underfull \hbox (badness 5050) in paragraph at lines 41693--41709 \OT1/cmr/m/n/10 cated.warningswarningsduplicated.warnings last.warningwarningsl ast.warning Overfull \hbox (1.66737pt too wide) in paragraph at lines 41693--41709 \OT1/cmr/m/n/10 print.warningswarningsprint.warnings unique.warningswarningsuni que.warnings Underfull \hbox (badness 1430) in paragraph at lines 41693--41709 \OT1/cmr/m/n/10 [.warn-ingswarn-ings[.warnings pro-gram-ming-warn-ings er-ror-w arn-ings warn-ings ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41712 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41714 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41715 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41716 \item[\code{...}] arguments to be passed to \code{\LinkA{cat}{cat}}. ! Undefined control sequence. l.41716 ...e{...}] arguments to be passed to \code {\LinkA{cat}{cat}}. ! Undefined control sequence. l.41716 ... arguments to be passed to ]\code{\LinkA {cat}{cat}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41717 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41718 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41720 \begin{Details} \relax ! Undefined control sequence. l.41721 See the description of \code {\LinkA{options}{options}("warn")} for the ! Undefined control sequence. l.41721 See the description of \code{\LinkA {options}{options}("warn")} for the ! Undefined control sequence. l.41722 circumstances under which there is a \code {last.warning} object and ! Undefined control sequence. l.41723 \code {warnings()} is used. In essence this is if \code{options(warn = ! Undefined control sequence. l.41723 ...} is used. In essence this is if \code {options(warn = ! Undefined control sequence. l.41724 0)} and \code {warning} has been called at least once. ! Undefined control sequence. l.41726 Note that the \code {\LinkA{length}{length}(last.warning)} is maximally ! Undefined control sequence. l.41726 Note that the \code{\LinkA {length}{length}(last.warning)} is maximally ! Undefined control sequence. l.41727 \code {\LinkA{getOption}{getOption}("nwarnings")} (at the time the wa... ! Undefined control sequence. l.41727 \code{\LinkA {getOption}{getOption}("nwarnings")} (at the time the wa... ! Undefined control sequence. l.41728 generated) which is \code {50} by default. To increase, use something ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41729 like \begin{alltt} options(nwarnings = 10000) \end{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41729 ...options(nwarnings = 10000) \end{alltt} [403] ! Undefined control sequence. l.41732 It is possible that \code {last.warning} refers to the last recorded ! Undefined control sequence. l.41733 ... the last warning, for example if \code {options(warn)} has ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41735 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41737 \begin{Value} ! Undefined control sequence. l.41738 an object of S3 class \code {"warnings"}, basically a named ! Undefined control sequence. l.41739 \code {\LinkA{list}{list}}. ! Undefined control sequence. l.41739 \code{\LinkA {list}{list}}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41740 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41742 \begin{Section} {Warning} ! Undefined control sequence. l.41743 It is undocumented where \code {last.warning} is stored nor that it is ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41745 \end{Section} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41747 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41751 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41753 \begin{SeeAlso} \relax ! Undefined control sequence. l.41754 \code {\LinkA{warning}{warning}}. ! Undefined control sequence. l.41754 \code{\LinkA {warning}{warning}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41755 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41757 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41758 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41759 # # NB this example is intended to be pasted in, ! You can't use `macro parameter character #' in horizontal mode. l.41759 ## NB this example is intended to be pasted in, ! You can't use `macro parameter character #' in horizontal mode. l.41760 # # rather than run by example() ! You can't use `macro parameter character #' in horizontal mode. l.41760 ## rather than run by example() ! Undefined control sequence. l.41763 options(warn = w); cat("\n warn =", w, "\n") ! Undefined control sequence. l.41763 ...ions(warn = w); cat("\n warn =", w, "\n ") ! Undefined control sequence. l.41764 for(i in 1:3) { cat(i,"..\n "); m <- matrix(1:7, 3,4) } ! You can't use `macro parameter character #' in horizontal mode. l.41767 options(ow) # reset ! You can't use `macro parameter character #' in horizontal mode. l.41768 tail(warnings(), 2) # see the last two warnings only (via '[' method) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41770 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41771 \end{Examples} ! Undefined control sequence. l.41772 \HeaderA {weekdays}{Extract Parts of a POSIXt or Date Object}{weekdays} ! Undefined control sequence. l.41773 \aliasA {julian}{weekdays}{julian} ! Undefined control sequence. l.41774 \methaliasA {julian.Date}{weekdays}{julian.Date} ! Undefined control sequence. l.41775 \methaliasA {julian.POSIXt}{weekdays}{julian.POSIXt} ! Undefined control sequence. l.41776 \aliasA {months}{weekdays}{months} ! Undefined control sequence. l.41777 \methaliasA {months.Date}{weekdays}{months.Date} ! Undefined control sequence. l.41778 \methaliasA {months.POSIXt}{weekdays}{months.POSIXt} ! Undefined control sequence. l.41779 \aliasA {quarters}{weekdays}{quarters} ! Undefined control sequence. l.41780 \methaliasA {quarters.Date}{weekdays}{quarters.Date} ! Undefined control sequence. l.41781 \methaliasA {quarters.POSIXt}{weekdays}{quarters.POSIXt} ! Undefined control sequence. l.41782 \methaliasA {weekdays.Date}{weekdays}{weekdays.Date} ! Undefined control sequence. l.41783 \methaliasA {weekdays.POSIXt}{weekdays}{weekdays.POSIXt} ! Undefined control sequence. l.41784 \keyword {chron}{weekdays} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41786 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41790 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [157 l.41792 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 weekdaysExtract Parts of a POSIXt or Date Ob-jectweek- Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 days ju-lian-week-daysju-lian ju-lian.Dateweekdaysjulian.Date j u- Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 lian.POSIXtweekdaysjulian.POSIXt month-sweek-daysmonths Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 months.Dateweekdaysmonths.Date months.POSIXtweekdaysmonths.POSI Xt Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 quar-ter-sweek-daysquar-ters quar-ters.Dateweekdaysquarters.Dat e quar- Underfull \hbox (badness 1137) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 ters.POSIXtweekdaysquarters.POSIXt week-days.Dateweekdaysweekda ys.Date Underfull \hbox (badness 10000) in paragraph at lines 41772--41793 \OT1/cmr/m/n/10 week-days.POSIXtweekdaysweekdays.POSIXt chron-week-days Ex-trac t the ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41818 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41820 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41821 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41822 \item[\code{x}] an object inheriting from class \code{"POSIXt"} or \... ! Undefined control sequence. l.41822 ...] an object inheriting from class \code {"POSIXt"} or \code{"Date"}. ! Undefined control sequence. l.41822 ...ing from class \code{"POSIXt"} or \code {"Date"}. [404]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41823 \item[\code{abbreviate}] logical vector (possibly recycled). Should... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41825 \item[\code{origin}] an length-one object inheriting from class ! Undefined control sequence. l.41826 \code {"POSIXt"} or \code{"Date"}. ! Undefined control sequence. l.41826 \code{"POSIXt"} or \code {"Date"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41827 \item[\code{...}] arguments for other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41828 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41829 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41831 \begin{Value} ! Undefined control sequence. l.41832 \code {weekdays} and \code{months} return a character ! Undefined control sequence. l.41832 \code{weekdays} and \code {months} return a character ! Undefined control sequence. l.41835 \code {quarters} returns a character vector of \code{"Q1"} to ! Undefined control sequence. l.41835 ...rs} returns a character vector of \code {"Q1"} to ! Undefined control sequence. l.41836 \code {"Q4"}. ! Undefined control sequence. l.41838 \code {julian} returns the number of days (possibly fractional) ! Undefined control sequence. l.41839 ... the origin, with the origin as a \code {"origin"} attribute. ! Undefined control sequence. l.41840 All time calculations in \R {} are done ignoring leap-seconds. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41841 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41843 \begin{Note} \relax ! Undefined control sequence. l.41845 very easy to compute: just use \code {\LinkA{as.POSIXlt}{as.POSIXlt}}... ! Undefined control sequence. l.41845 ... easy to compute: just use \code{\LinkA {as.POSIXlt}{as.POSIXlt}} ... ! Undefined control sequence. l.41847 ...esired as character strings), use \code {\LinkA{strftime}{strftime}}. ! Undefined control sequence. l.41847 ...as character strings), use \code{\LinkA {strftime}{strftime}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41848 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41850 \begin{SeeAlso} \relax ! Undefined control sequence. l.41851 \code {\LinkA{DateTimeClasses}{DateTimeClasses}}, \code{\LinkA{Date}{... ! Undefined control sequence. l.41851 \code{\LinkA {DateTimeClasses}{DateTimeClasses}}, \code{\LinkA{Date}{... ! Undefined control sequence. l.41851 ...teTimeClasses}{DateTimeClasses}}, \code {\LinkA{Date}{Date}} ! Undefined control sequence. l.41851 ...lasses}{DateTimeClasses}}, \code{\LinkA {Date}{Date}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41852 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41854 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41855 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.41861 # # Julian Day Number (JDN, https://en.wikipedia.org/wiki/Julian_day) ! You can't use `macro parameter character #' in vertical mode. l.41861 ## Julian Day Number (JDN, https://en.wikipedia.org/wiki/Julian_day) ! Missing $ inserted. $ l.41861 ..., https://en.wikipedia.org/wiki/Julian_ day) ! You can't use `macro parameter character #' in math mode. l.41862 # # is the number of days since noon UTC on the first day of 4317 BC. ! You can't use `macro parameter character #' in math mode. l.41862 ## is the number of days since noon UTC on the first day of 4317 BC. ! You can't use `macro parameter character #' in math mode. l.41863 # # in the proleptic Julian calendar. To more recently, in ! You can't use `macro parameter character #' in math mode. l.41863 ## in the proleptic Julian calendar. To more recently, in ! You can't use `macro parameter character #' in math mode. l.41864 # # 'Terrestrial Time' which differs from UTC by a few seconds ! You can't use `macro parameter character #' in math mode. l.41864 ## 'Terrestrial Time' which differs from UTC by a few seconds ! You can't use `macro parameter character #' in math mode. l.41865 # # See https://en.wikipedia.org/wiki/Terrestrial_Time ! You can't use `macro parameter character #' in math mode. l.41865 ## See https://en.wikipedia.org/wiki/Terrestrial_Time ! You can't use `macro parameter character #' in math mode. l.41866 julian(Sys.Date(), -2440588) # from a day ! You can't use `macro parameter character #' in math mode. l.41867 ...eric(julian(Sys.time())) + 2440587.5) # from a date-time ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41868 \end{ExampleCode} ! Missing $ inserted. $ l.41868 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41869 \end{Examples} ! Undefined control sequence. l.41870 \HeaderA {which}{Which indices are TRUE?}{which} ! Undefined control sequence. l.41871 \aliasA {arrayInd}{which}{arrayInd} ! Undefined control sequence. l.41872 \keyword {logic}{which} ! Undefined control sequence. l.41873 \keyword {attribute}{which} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41875 \begin{Description} \relax ! Undefined control sequence. l.41876 Give the \code {TRUE} indices of a logical object, allowing for array ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41878 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41880 \begin{Usage} Overfull \hbox (753.9576pt too wide) in paragraph at lines 41861--41881 []\OT1/cmr/m/n/10 Julian Day Num-ber (JDN, https://en.wikipedia.org/wiki/Julian $[]\OML/cmm/m/it/10 ay\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 isthenumberofdayssincen oonUTConthefirstdayof\OT1/cmr/m/n/10 4317\OML/cmm/m/it/10 BC:intheprolepticJuli ancalendar:Tomorerecently; in[]TerrestrialTime[]whichdiffersfromUTCbyafewsecond sSeehttps \OT1/cmr/m/n/10 : Overfull \hbox (198.83907pt too wide) in paragraph at lines 41861--41881 \OML/cmm/m/it/10 ==en:wikipedia:org=wiki=Terrestrial[]imejulian\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:Date\OT1/cmr/m/n/10 ()\OML/cmm/m/it/10 ; \OMS/cmsy/m/n/10 ^^@\OT1/cmr/m/n/10 2440588)\OML/cmm/m/it/10 fromadayfloor\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 as:numeric\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 julian\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Sys:time\OT1/cmr/m/n/10 ())) + ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41885 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41887 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41888 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Compa [158nion for explanation. Type H for immediate help. ... l.41889 \item[\code{x}] a \code{\LinkA{logical}{logical}} vector or array. ... ! Undefined control sequence. l.41889 \item[\code{x}] a \code {\LinkA{logical}{logical}} vector or array. ... ! Undefined control sequence. l.41889 \item[\code{x}] a \code{\LinkA {logical}{logical}} vector or array. ... ! Undefined control sequence. l.41889 ...ical}{logical}} vector or array. \code {\LinkA{NA}{NA}}s ! Undefined control sequence. l.41889 ...ogical}} vector or array. \code{\LinkA {NA}{NA}}s ! Undefined control sequence. l.41890 ...llowed and omitted (treated as if \code {FALSE}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41891 \item[\code{arr.ind}] logical; should \bold{arr}ay \bold{ind}ices be... ! Undefined control sequence. l.41891 ...m[\code{arr.ind}] logical; should \bold {arr}ay \bold{ind}ices be ... ! Undefined control sequence. l.41891 ...nd}] logical; should \bold{arr}ay \bold {ind}ices be returned ! Undefined control sequence. l.41892 when \code {x} is an array? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41894 \item[\code{ind}] integer-valued index vector, as resulting from ! Undefined control sequence. l.41895 \code {which(x)}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41896 \item[\code{.dim}] \code{\LinkA{dim}{dim}(.)} integer vector ! Undefined control sequence. l.41896 \item[\code{.dim}] \code {\LinkA{dim}{dim}(.)} integer vector ! Undefined control sequence. l.41896 \item[\code{.dim}] \code{\LinkA {dim}{dim}(.)} integer vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41897 \item[\code{.dimnames}] optional list of character \code{\LinkA{dimn... ! Undefined control sequence. l.41897 ...ames}] optional list of character \code {\LinkA{dimnames}{dimnames... ! Undefined control sequence. l.41897 ...optional list of character \code{\LinkA {dimnames}{dimnames}(.)}. ! Undefined control sequence. l.41898 If \code {useNames} is true, to be used for constructing dimnames for ! Undefined control sequence. l.41899 \code {arrayInd()} (and hence, \code{which(*, arr.ind=TRUE)}). ! Undefined control sequence. l.41899 \code{arrayInd()} (and hence, \code {which(*, arr.ind=TRUE)}). ! Undefined control sequence. l.41900 If \code {\LinkA{names}{names}(.dimnames)} is not empty, these are us... ! Undefined control sequence. l.41900 If \code{\LinkA {names}{names}(.dimnames)} is not empty, these are us... ! Undefined control sequence. l.41901 column names. \code {.dimnames[[1]]} is used as row names. Underfull \hbox (badness 1057) in paragraph at lines 41897--41902 \OT1/cmr/m/n/10 be used for con-struct-ing dim-names for ar-rayInd() (and hence , which(*, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41902 \item[\code{useNames}] logical indicating if the value of \code{arra... ! Undefined control sequence. l.41902 ...ogical indicating if the value of \code {arrayInd()} ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41904 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41905 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41907 \begin{Value} ! Undefined control sequence. l.41908 If \code {arr.ind == FALSE} (the default), an integer vector with ! Undefined control sequence. l.41909 \code {length} equal to \code{sum(x)}, i.e., to the number of ! Undefined control sequence. l.41909 \code{length} equal to \code {sum(x)}, i.e., to the number of ! Undefined control sequence. l.41910 \code {TRUE}s in \code{x}; Basically, the result is ! Undefined control sequence. l.41910 \code{TRUE}s in \code {x}; Basically, the result is ! Undefined control sequence. l.41911 \code {(1:length(x))[x]}. ! Undefined control sequence. l.41913 If \code {arr.ind == TRUE} and \code{x} is an \code{\LinkA{array}{arr... ! Undefined control sequence. l.41913 If \code{arr.ind == TRUE} and \code {x} is an \code{\LinkA{array}{arr... ! Undefined control sequence. l.41913 ...r.ind == TRUE} and \code{x} is an \code {\LinkA{array}{array}} (has ! Undefined control sequence. l.41913 ...= TRUE} and \code{x} is an \code{\LinkA {array}{array}} (has ! Undefined control sequence. l.41914 a \code {\LinkA{dim}{dim}} attribute), the result is ! Undefined control sequence. l.41914 a \code{\LinkA {dim}{dim}} attribute), the result is ! Undefined control sequence. l.41915 \code {arrayInd(which(x), dim(x), dimnames(x))}, namely a matrix ! Undefined control sequence. l.41916 ...are the indices of one element of \code {x}; see ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41918 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41920 \begin{Note} This is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. ] \relax ! Undefined control sequence. l.41921 Unlike most other base \R {} functions this does not coerce to \code{x} ! Undefined control sequence. l.41921 ...functions this does not coerce to \code {x} ! Undefined control sequence. l.41922 to logical: only arguments with \code {\LinkA{typeof}{typeof}} logica... ! Undefined control sequence. l.41922 ...gical: only arguments with \code{\LinkA {typeof}{typeof}} logical are ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41924 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41926 \begin{Author} \relax ! Undefined control sequence. l.41928 \code {arr.ind} option. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41929 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41931 \begin{SeeAlso} \relax ! Undefined control sequence. l.41932 \code {\LinkA{Logic}{Logic}}, \code{\LinkA{which.min}{which.min}} for... ! Undefined control sequence. l.41932 \code{\LinkA {Logic}{Logic}}, \code{\LinkA{which.min}{which.min}} for... ! Undefined control sequence. l.41932 \code{\LinkA{Logic}{Logic}}, \code {\LinkA{which.min}{which.min}} for... ! Undefined control sequence. l.41932 \code{\LinkA{Logic}{Logic}}, \code{\LinkA {which.min}{which.min}} for... ! Undefined control sequence. l.41933 the minimum or maximum, and \code {\LinkA{match}{match}} for the firs... ! Undefined control sequence. l.41933 the minimum or maximum, and \code{\LinkA {match}{match}} for the firs... ! Undefined control sequence. l.41934 ...t in a vector, i.e., for a scalar \code {a}, \code{match(a, x)} ! Undefined control sequence. l.41934 ...tor, i.e., for a scalar \code{a}, \code {match(a, x)} ! Undefined control sequence. l.41935 is equivalent to \code {min(which(x == a))} but much more efficient. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41936 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41938 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41939 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.41941 ...FALSE, TRUE, NA, FALSE, FALSE, TRUE)) # > 1 3 7 ! Missing $ inserted. $ l.41951 rownames(m) <- paste("Case", 1:3, sep = "_ ") ! Missing $ inserted. $ l.41953 [405] ! You can't use `macro parameter character #' in horizontal mode. l.41959 dim(vm) <- length(vm) # -- funny thing with length(dim(...)) == 1 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41962 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41963 \end{Examples} ! Undefined control sequence. l.41964 \HeaderA {which.min}{Where is the Min() or Max() or first TRUE or FAL... ! Undefined control sequence. l.41965 \aliasA {which.max}{which.min}{which.max} ! Undefined control sequence. l.41966 \keyword {utilities}{which.min} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41968 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41971 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41973 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41978 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41980 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41981 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41982 \item[\code{x}] numeric (logical, integer or double) vector or an \R... ! Undefined control sequence. l.41982 ...cal, integer or double) vector or an \R {} object ! Undefined control sequence. l.41983 for which the internal coercion to \code {\LinkA{double}{double}} wor... ! Undefined control sequence. l.41983 ...h the internal coercion to \code{\LinkA {double}{double}} works whose ! Undefined control sequence. l.41984 \code {\LinkA{min}{min}} or \code{\LinkA{max}{max}} is searched for. ! Undefined control sequence. l.41984 \code{\LinkA {min}{min}} or \code{\LinkA{max}{max}} is searched for. ! Undefined control sequence. l.41984 \code{\LinkA{min}{min}} or \code {\ Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159LinkA{max}{max}} is searched for. ! Undefined control sequence. l.41984 \code{\LinkA{min}{min}} or \code{\LinkA {max}{max}} is searched for. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41985 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41986 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41988 \begin{Value} ! Undefined control sequence. l.41989 Missing and \code {NaN} values are discarded. ! Undefined control sequence. l.41991 an \code {\LinkA{integer}{integer}} or on 64-bit platforms, if ! Undefined control sequence. l.41991 an \code{\LinkA {integer}{integer}} or on 64-bit platforms, if ! Undefined control sequence. l.41992 \code {\LinkA{length}{length}(x) =: n}\eqn{\ge 2^{31}}{} an integer ! Undefined control sequence. l.41992 \code{\LinkA {length}{length}(x) =: n}\eqn{\ge 2^{31}}{} an integer ! Undefined control sequence. l.41992 \code{\LinkA{length}{length}(x) =: n}\eqn {\ge 2^{31}}{} an integer ! Missing $ inserted. $ l.41992 ...\LinkA{length}{length}(x) =: n}\eqn{\ge 2^{31}}{} an integer ! Extra }, or forgotten $. l.41992 ...ength}{length}(x) =: n}\eqn{\ge 2^{31}} {} an integer ! Undefined control sequence. l.41993 valued \code {\LinkA{double}{double}} of length 1 or 0 (iff \code{x} ... ! Undefined control sequence. l.41993 valued \code{\LinkA {double}{double}} of length 1 or 0 (iff \code{x} ... ! Undefined control sequence. l.41993 ...e}{double}} of length 1 or 0 (iff \code {x} has no ! Undefined control sequence. l.41994 non-\code {NA}s), giving the index of the \emph{first} minimum or ! Undefined control sequence. l.41995 maximum respectively of \code {x}. ! Missing $ inserted. $ l.41996 Underfull \hbox (badness 10000) in paragraph at lines 41991--41996 []\OT1/cmr/m/n/10 an in-te-gerin-te-ger or on 64-bit plat-forms, if length-leng th(x) =: Underfull \hbox (badness 10000) in paragraph at lines 41991--41996 \OT1/cmr/m/n/10 n$\OMS/cmsy/m/n/10 ^^U \OT1/cmr/m/n/10 2[][]\OML/cmm/m/it/10 an integervalued[]oflength\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 or\OT1/cmr/m/n/10 0(\O ML/cmm/m/it/10 iffxhasnonon \OMS/cmsy/m/n/10 ^^@ ! Undefined control sequence. l.41998 (but more efficient than) \code {which(x == min(x, na.rm = TRUE))} or ! Undefined control sequence. l.41999 \code {which(x == max(x, na.rm = TRUE))} respectively. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42000 \end{Value} ! Missing } inserted. } l.42000 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42002 \begin{Section} {Logical \code{x} -- First \code{TRUE} or \code{FALSE}} ! Undefined control sequence. l.42002 \begin{Section}{Logical \code {x} -- First \code{TRUE} or \code{FALSE}} ! Undefined control sequence. l.42002 ...ection}{Logical \code{x} -- First \code {TRUE} or \code{FALSE}} ! Undefined control sequence. l.42002 ... \code{x} -- First \code{TRUE} or \code {FALSE}} ! Undefined control sequence. l.42003 For a \code {\LinkA{logical}{logical}} vector \code{x} with both \cod... ! Undefined control sequence. l.42003 For a \code{\LinkA {logical}{logical}} vector \code{x} with both \cod... ! Undefined control sequence. l.42003 ...{\LinkA{logical}{logical}} vector \code {x} with both \code{FALSE}... ! Undefined control sequence. l.42003 ...gical}} vector \code{x} with both \code {FALSE} and ! Undefined control sequence. l.42004 \code {TRUE} values, \code{which.min(x)} and \code{which.max(x)} return ! Undefined control sequence. l.42004 \code{TRUE} values, \code {which.min(x)} and \code{which.max(x)} return ! Undefined control sequence. l.42004 ...} values, \code{which.min(x)} and \code {which.max(x)} return ! Undefined control sequence. l.42005 the index of the first \code {FALSE} or \code{TRUE}, respectively, as ! Undefined control sequence. l.42005 ...ndex of the first \code{FALSE} or \code {TRUE}, respectively, as ! Undefined control sequence. l.42006 \code {FALSE < TRUE}. However, \code{match(FALSE, x)} or ! Undefined control sequence. l.42006 \code{FALSE < TRUE}. However, \code {match(FALSE, x)} or ! Undefined control sequence. l.42007 \code {match(TRUE, x)} are typically \emph{preferred}, as they do ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42009 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42011 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42013 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42015 \begin{SeeAlso} \relax ! Undefined control sequence. l.42016 \code {\LinkA{which}{which}}, \code{\LinkA{max.col}{max.col}}, \code{... ! Undefined control sequence. l.42016 \code{\LinkA {which}{which}}, \code{\LinkA{max.col}{max.col}}, \code{... ! Undefined control sequence. l.42016 \code{\LinkA{which}{which}}, \code {\LinkA{max.col}{max.col}}, \code{... ! Undefined control sequence. l.42016 \code{\LinkA{which}{which}}, \code{\LinkA {max.col}{max.col}}, \code{... ! Undefined control] sequence. l.42016 ... \code{\LinkA{max.col}{max.col}}, \code {\LinkA{max}{max}}, etc. ! Undefined control sequence. l.42016 ...\LinkA{max.col}{max.col}}, \code{\LinkA {max}{max}}, etc. ! Undefined control sequence. l.42018 Use \code {\LinkA{arrayInd}{arrayInd}()}, if you need array/matrix in... ! Undefined control sequence. l.42018 Use \code{\LinkA {arrayInd}{arrayInd}()}, if you need array/matrix in... ! Undefined control sequence. l.42021 \code {\LinkA{which.is.max}{which.is.max}} in package \Rhref{https://... ! Undefined control sequence. l.42021 \code{\LinkA {which.is.max}{which.is.max}} in package \Rhref{https://... ! Undefined control sequence. l.42021 ...s.max}{which.is.max}} in package \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.42021 ...//CRAN.R-project.org/package=nnet}{\pkg {nnet}} differs in ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42024 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42026 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42027 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 42021--42031 []\OT1/cmr/m/n/10 which.is.maxwhich.is.max in pack-age https://CRAN.R- Underfull \hbox (badness 3701) in paragraph at lines 42021--42031 \OT1/cmr/m/n/10 project.org/package=nnetnnet dif-fers in break-ing ties at ran- dom (and ! You can't use `macro parameter character #' in vertical mode. l.42032 # # it *does* work with NA's present, by discarding them: ! You can't use `macro parameter character #' in vertical mode. l.42032 ## it *does* work with NA's present, by discarding them: ! You can't use `macro parameter character #' in horizontal mode. l.42035 which.min(presidents) # 28 ! You can't use `macro parameter character #' in horizontal mode. l.42036 which.max(presidents) # 2 Underfull \hbox (badness 4859) in paragraph at lines 42032--42037 []\OT1/cmr/m/n/10 it *does* work with NA's present, by dis-card-ing them: pres- i- Underfull \hbox (badness 1348) in paragraph at lines 42032--42037 \OT1/cmr/m/n/10 dents[1:30] range(presidents, na.rm = TRUE) which.min(president s) 28 ! You can't use `macro parameter character #' in vertical mode. l.42038 # # Find the first occurrence, i.e. the first TRUE, if there is at le... ! You can't use `macro parameter character #' in vertical mode. l.42038 ## Find the first occurrence, i.e. the first TRUE, if there is at le... ! You can't use `macro parameter character #' in horizontal mode. l.42040 # # where is the first value >= 20 ? ! You can't use `macro parameter character #' in horizontal mode. l.42040 ## where is the first value >= 20 ? ! You can't use `macro parameter character #' in vertical mode. l.42043 # # Also works for lists (which can be coerced to numeric vectors): ! You can't use `macro parameter character #' in vertical mode. l.42043 ## Also works for lists (which can be coerced to numeric vectors): ! You can't use `macro parameter character #' in horizontal mode. l.42044 which.min(list(A = 7, pi = pi)) # # -> c(pi = 2L) ! You can't use `macro parameter character #' in horizontal mode. l.42044 which.min(list(A = 7, pi = pi)) ## -> c(pi = 2L) Underfull \hbox (badness 3612) in paragraph at lines 42043--42045 []\OT1/cmr/m/n/10 Also works for lists (which can be co-erced to nu-meric vec-t ors): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42046 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42047 \end{Examples} ! Undefined control sequence. l.42048 \HeaderA {with}{Evaluate an Expression in a Data Environment}{with} ! Undefined control sequence. l.42049 \methaliasA {with.default}{with}{with.default} ! Undefined control sequence. l.42050 \aliasA {within}{with}{within} ! Undefined control sequence. l.42051 \methaliasA {within.data.frame}{with}{within.data.frame} ! Undefined control sequence. l.42052 \methaliasA {within.list}{with}{within.list} ! Undefined control sequence. l.42053 \keyword {data}{with} ! Undefined control sequence. l.42054 \keyword {programming}{with} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42056 \begin{Description} \relax ! Undefined control sequence. l.42057 Evaluate an \R {} expression in an environment constructed from data, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42059 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42061 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 42048--42062 \OT1/cmr/m/n/10 withEvaluate an Ex-pres-sion in a Data En-vi-ron- Underfull \hbox (badness 10000) in paragraph at lines 42048--42062 \OT1/cmr/m/n/10 men-twith with.defaultwithwith.default with-in-with-within Underfull \hbox (badness 10000) in paragraph at lines 42048--42062 \OT1/cmr/m/n/10 within.data.framewithwithin.data.frame within.listwithwithin.li st dataw-ith ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42066 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42068 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42069 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42070 \item[\code{data}] data to use for constructing an environment. For the ! Undefined control sequence. l.42071 default \code {with} method this may be an environment, a list, a ! Undefined control sequence. l.42072 data frame, or an integer as in \code {sys.call}. For \code{within}, ! Undefined control sequence. l.42072 ...nteger as in \code{sys.call}. For \code {within}, [406] [160 ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42074 \item[\code{expr}] expression to evaluate. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42075 \item[\code{...}] arguments to be passed to future methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42076 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42077 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42079 \begin{Details} \relax ! Undefined control sequence. l.42080 \code {with} is a generic function that evaluates \code{expr} in a ! Undefined control sequence. l.42080 ...a generic function that evaluates \code {expr} in a ! Undefined control sequence. l.42081 local environment constructed from \code {data}. The environment has ! Undefined control sequence. l.42083 ...to modeling functions. (Note: if \code {data} is ! Undefined control sequence. l.42086 Note that assignments within \code {expr} take place in the constructed ! Undefined control sequence. l.42089 \code {within} is similar, except that it examines the environment ! Undefined control sequence. l.42090 after the evaluation of \code {expr} and makes the corresponding ! Undefined control sequence. l.42091 modifications to a copy of \code {data} (this may fail in the data ! Undefined control sequence. l.42093 frame), and returns it. \code {within} can be used as an alternative ! Undefined control sequence. l.42094 to \code {transform}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42095 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42097 \begin{Value} ! Undefined control sequence. l.42098 For \code {with}, the value of the evaluated \code{expr}. For ! Undefined control sequence. l.42098 ...with}, the value of the evaluated \code {expr}. For ! Undefined control sequence. l.42099 \code {within}, the modified object. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... entering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.t2d/pdf/xtr/R-intro.texi (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:] Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 l.42100 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42102 \begin{Note} \relax ! Undefined control sequence. l.42105 ...lly one should refrain from using \code {with()}, as, ! Undefined control sequence. l.42106 e.g., variables in \code {data} may accidentally override local ! Undefined control sequence. l.42110 \code {data} argument (and typically using \code{\LinkA{formula}{form... ! Undefined control sequence. l.42110 ...ta} argument (and typically using \code {\LinkA{formula}{formula}}s), ! Undefined control sequence. l.42110 ...ument (and typically using \code{\LinkA {formula}{formula}}s), ! Undefined control sequence. l.42111 it is typically preferred to use the \code {data} argument of that ! Undefined control sequence. l.42112 function rather than to use \code {with(data, ...)}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42113 \end{Note} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42115 \begin{References} \relax ! Undefined control sequence. l.42117 \url {http://developer.r-project.org/nonstandard-eval.pdf} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42118 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42120 \begin{SeeAlso} \relax ! Undefined control sequence. l.42121 \code {\LinkA{evalq}{evalq}}, \code{\LinkA{attach}{attach}}, \code{\L... ! Undefined control sequence. l.42121 \code{\LinkA {evalq}{evalq}}, \code{\LinkA{attach}{attach}}, \code{\L... ! Undefined control sequence. l.42121 \code{\LinkA{evalq}{evalq}}, \code {\LinkA{attach}{attach}}, \code{\L... ! Undefined control sequence. l.42121 \code{\LinkA{evalq}{evalq}}, \code{\LinkA {attach}{attach}}, \code{\L... ! Undefined control sequence. l.42121 ...}, \code{\LinkA{attach}{attach}}, \code {\LinkA{assign}{assign}}, ! Undefined control sequence. l.42121 ...e{\LinkA{attach}{attach}}, \code{\LinkA {assign}{assign}}, ! Undefined control sequence. l.42122 \code {\LinkA{transform}{transform}}. ! Undefined control sequence. l.42122 \code{\LinkA {transform}{transform}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42123 \end{SeeAlso} ! LaTeX Error: Environment Example [161 pdf,] fonts,s undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42125 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42126 \begin{ExampleCode} ! Misplaced alignment tab character &. l.42127 with(mtcars, mpg[cyl == 8 & disp > 350]) ! You can't use `macro parameter character #' in horizontal mode. l.42128 # is the same as, but nicer than ! Misplaced alignment tab character &. l.42129 mtcars$mpg[mtcars$cyl == 8 & mtcars$disp > 350] ! Missing $ inserted. $ l.42130 ! You can't use `macro parameter character #' in vertical mode. l.42133 # examples from glm: ! You can't use `macro parameter character #' in horizontal mode. l.42140 aq <- within(airquality, { # Notice that multiple vars can be ch... ! You can't use `macro parameter character #' in horizontal mode. l.42143 cTemp <- round((Temp - 32) * 5/9, 1) # From Fahrenheit to Celsius ! You can't use `macro parameter character #' in horizontal mode. l.42144 S.cT <- Solar.R / cTemp # using the newly created variable ! You can't use `macro parameter character #' in vertical mode. l.42149 # example from boxplot: ! You can't use `macro parameter character #' in vertical mode. l.42162 # alternate form that avoids subset argument: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42173 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42174 \end{Examples} ! Undefined control sequence. l.42175 \HeaderA {withVisible}{Return both a Value and its Visibility}{withVi... ! Undefined control sequence. l.42176 \keyword {programming}{withVisible} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42178 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42181 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42183 \begin{Usage} [407] [162 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42187 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42189 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42190 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42191 \item[\code{x}] an expression to be evaluated. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42192 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42193 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42195 \begin{Details} \relax ! Undefined control sequence. l.42196 The argument, \emph{not} an \code {\LinkA{expression}{expression}} ob... ! Undefined control sequence. l.42196 The argument, \emph{not} an \code{\LinkA {expression}{expression}} ob... ! Undefined control sequence. l.42197 an (unevaluated function) \code {\LinkA{call}{call}}, is evaluated in... ! Undefined control sequence. l.42197 an (unevaluated function) \code{\LinkA {call}{call}}, is evaluated in... ! Undefined control sequence. l.42200 This is a \LinkA {primitive}{primitive} function. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42201 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42203 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42204 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42205 \item[\code{value }] The value of \code{x} after evaluation. ! Undefined control sequence. l.42205 \item[\code{value }] The value of \code {x} after evaluation. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42206 \item[\code{visible }] logical; whether the value would auto-print. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42207 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42208 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42210 \begin{SeeAlso} \relax ! Undefined control sequence. l.42211 \code {\LinkA{invisible}{invisible}}, \code{\LinkA{eval}{eval}}; ! Undefined control sequence. l.42211 \code{\LinkA {invisible}{invisible}}, \code{\LinkA{eval}{eval}}; ! Undefined control sequence. l.42211 \code{\LinkA{invisible}{invisible}}, \code {\LinkA{eval}{eval}}; ! Undefined control sequence. l.42211 ...kA{invisible}{invisible}}, \code{\LinkA {eval}{eval}}; ! Undefined control sequence. l.42212 \code {\LinkA{withAutoprint}{withAutoprint}()} calls \code{\LinkA{sou... ! Undefined control sequence. l.42212 \code{\LinkA {withAutoprint}{withAutoprint}()} calls \code{\LinkA{sou... ! Undefined control sequence. l.42212 ...utoprint}{withAutoprint}()} calls \code {\LinkA{source}{source}()}... ! Undefined control sequence. l.42212 ...t}{withAutoprint}()} calls \code{\LinkA {source}{source}()} which ! Undefined control sequence. l.42213 itself uses \code {withVisible()} in order to correctly ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42215 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42217 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42218 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.42220 withVisible(x <- 1) # *$visible is FALSE ! You can't use `macro parameter character #' in math mode. l.42222 withVisible(x) # *$visible is TRUE ! You can't use `macro parameter character #' in vertical mode. l.42224 # Wrap the call in evalq() for special handling ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the ]LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42228 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42229 \end{Examples} ! Undefined control sequence. l.42230 \HeaderA {write}{Write Data to a File}{write} ! Undefined control sequence. l.42231 \keyword {file}{write} ! Undefined control sequence. l.42232 \keyword {connection}{write} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42234 \begin{Description} \relax ! Undefined control sequence. l.42235 The data (usually a matrix) \code {x} are written to file \code{file}. ! Undefined control sequence. l.42235 ...rix) \code{x} are written to file \code {file}. ! Undefined control sequence. l.42236 If \code {x} is a two-dimensional matrix you need to transpose it to ... ! Undefined control sequence. l.42237 columns in \code {file} the same as those in the internal representat... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42238 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42240 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42246 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42248 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42249 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42250 \item[\code{x}] the data to be written out, usually an atomic vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42251 \item[\code{file}] A connection, or a character string naming the fi... ! Undefined control sequence. l.42252 If \code {""}, print to the standard output connection. ! Undefined control sequence. l.42253 If it is \code {"|cmd"} Chapter 8 [163, the output is piped to the command given ! Undefined control sequence. l.42254 by \file {cmd}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42256 \item[\code{ncolumns}] the number of columns to write the data in. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42257 \item[\code{append}] if \code{TRUE} the data \code{x} are appended t... ! Undefined control sequence. l.42257 \item[\code{append}] if \code {TRUE} the data \code{x} are appended t... ! Undefined control sequence. l.42257 ...{append}] if \code{TRUE} the data \code {x} are appended to the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42259 \item[\code{sep}] a string used to separate columns. Using \code{se... ! Undefined control sequence. l.42259 ... used to separate columns. Using \code {sep = "\bsl{}t"} ! Undefined control sequence. l.42259 ...arate columns. Using \code{sep = "\bsl {}t"} ! Undefined control sequence. l.42260 ... tab delimited output; default is \code {" "}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42261 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42262 \end{Arguments} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42264 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42268 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42270 \begin{SeeAlso} \relax ! Undefined control sequence. l.42271 \code {write} is a wrapper for \code{\LinkA{cat}{cat}}, which gives f... ! Undefined control sequence. l.42271 \code{write} is a wrapper for \code {\LinkA{cat}{cat}}, which gives f... ! Undefined control sequence. l.42271 \code{write} is a wrapper for \code{\LinkA {cat}{cat}}, which gives f... ! Undefined control sequence. l.42274 \code {\LinkA{save}{save}} for writing any \R{} objects, ! Undefined control sequence. l.42274 \code{\LinkA page headings,] {save}{save}} for writing any \R{} objects, ! Undefined control sequence. l.42274 ...{\LinkA{save}{save}} for writing any \R {} objects, ! Undefined control sequence. l.42275 \code {\LinkA{write.table}{write.table}} for data frames, ! Undefined control sequence. l.42275 \code{\LinkA {write.table}{write.table}} for data frames, ! Undefined control sequence. l.42276 and \code {\LinkA{scan}{scan}} for reading data. ! Undefined control sequence. l.42276 and \code{\LinkA {scan}{scan}} for reading data. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42277 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42279 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42280 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.42281 # create a 2 by 5 matrix ! You can't use `macro parameter character #' in vertical mode. l.42284 # the file data contains x, two rows, five cols ! You can't use `macro parameter character #' in horizontal mode. l.42285 # 1 3 5 7 9 will form the first row ! You can't use `macro parameter character #' in vertical mode. l.42288 # Writing to the "console" 'tab-delimited' ! You can't use `macro parameter character #' in horizontal mode. l.42289 # two rows, five cols but the first row is 1 2 3 4 5 ! You can't use `macro parameter character #' in horizontal mode. l.42291 unlink("data") # tidy up ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42292 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42293 \end{Examples} ! Undefined control sequence. l.42294 \HeaderA {writeLines}{Write Lines to a Connection}{writeLines} ! Undefined control sequence. l.42295 \keyword {file}{writeLines} ! Undefined control sequence. l.42296 \keyword {connection}{writeLines} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42298 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42300 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42302 \begin{Usage} tables, conditionals, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42306 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42308 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42309 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42310 \item[\code{text}] A character vector ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42311 \item[\code{con}] A \LinkA{connection}{connection} object or a chara... ! Undefined control sequence. l.42311 \item[\code{con}] A \LinkA {connection}{connection} object or a chara... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42312 \item[\code{sep}] character string. A string to be written to the c... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42314 \item[\code{useBytes}] logical. See `Details'. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42315 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42316 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42318 \begin{Details} \relax ! Undefined control sequence. l.42319 If the \code {con} is a character string, the function calls ! Undefined control sequence. l.42320 \code {\LinkA{file}{file}} to obtain a file connection which is opene... ! Undefined control sequence. l.42320 \code{\LinkA {file}{file}} to obtain a file connection which is opene... [408 indexing, sectioning,] toc, ! Undefined control sequence. l.42325 \code {"wt"} mode and then closed again. ! Undefined control sequence. l.42327 Normally \code {writeLines} is used with a text-mode connection, and... ! Undefined control sequence. l.42331 the file in \code {sep}. For even more control, use ! Undefined control sequence. l.42332 \code {\LinkA{writeChar}{writeChar}} on a binary connection. ! Undefined control sequence. l.42332 \code{\LinkA {writeChar}{writeChar}} on a binary connection. ! Undefined control sequence. l.42334 \code {useBytes} is for expert use. Normally (when false) character ! Undefined control sequence. l.42337 re-encoding). \code {useBytes = TRUE} suppresses the re-encoding of ! Undefined control sequence. l.42340 e.g.~\code {\LinkA{iconv}{iconv}}. (It is invoked automatically for ... ! Undefined control sequence. l.42340 e.g.~\code{\LinkA {iconv}{iconv}}. (It is invoked automatically for ... ! Undefined control sequence. l.42341 with marked encoding \code {"bytes"}.) ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42342 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42344 \begin{SeeAlso} \relax ! Undefined control sequence. l.42345 \code {\LinkA{connections}{connections}}, \code{\LinkA{writeChar}{wri... ! Undefined control sequence. l.42345 \code{\LinkA {connections}{connections}}, \code{\LinkA{writeChar}{wri... ! Undefined control sequence. l.42345 ...LinkA{connections}{connections}}, \code {\LinkA{writeChar}{writeCh... ! Undefined control sequence. l.42345 ...onnections}{connections}}, \code{\LinkA {writeChar}{writeChar}}, \... ! Undefined control sequence. l.42345 ...de{\LinkA{writeChar}{writeChar}}, \code {\LinkA{writeBin}{writeBin}}, ! Undefined control sequence. l.42345 ...kA{writeChar}{writeChar}}, \code{\LinkA {writeBin}{writeBin}}, ! Undefined control sequence. l.42346 \code {\LinkA{readLines}{readLines}}, \code{\LinkA{cat}{cat}} ! Undefined control sequence. l.42346 \code{\LinkA {readLines}{readLines}}, \code{\LinkA{cat}{cat}} ! Undefined control sequence. l.42346 \code{\LinkA{readLines}{readLines}}, \code {\LinkA{cat}{cat}} ! Undefined control sequence. l.42346 ...kA{readLines}{readLines}}, \code{\LinkA {cat}{cat}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42347 \end{SeeAlso} ! Undefined control sequence. l.42348 \HeaderA {xtfrm}{Auxiliary Function for Sorting and Ranking}{xtfrm} ! Undefined control sequence. l.42349 \methaliasA {xtfrm.AsIs}{xtfrm}{xtfrm.AsIs} ! Undefined control sequence. l.42350 \methaliasA {xtfrm.Date}{xtfrm}{xtfrm.Date} ! Undefined control sequence. l.42351 \methaliasA {xtfrm.default}{xtfrm}{xtfrm.default} ! Undefined control sequence. l.42352 \methaliasA {xtfrm.difftime}{xtfrm}{xtfrm.difftime} ! Undefined control sequence. environments, [164 defuns, macros, l.42353 \methaliasA {xtfrm.factor}{xtfrm}{xtfrm.factor} ! Undefined control sequence. l.42354 \methaliasA {xtfrm.POSIXct}{xtfrm}{xtfrm.POSIXct} ! Undefined control sequence. l.42355 \methaliasA {xtfrm.POSIXlt}{xtfrm}{xtfrm.POSIXlt} ! Undefined control sequence. l.42356 \methaliasA {xtfrm.Surv}{xtfrm}{xtfrm.Surv} ! Undefined control sequence. l.42357 \keyword {univar}{xtfrm} ! Undefined control sequence. l.42358 \keyword {manip}{xtfrm} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42360 \begin{Description} \relax ! Undefined control sequence. l.42362 will sort in the same order as \code {x}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42363 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42365 \begin{Usage} Underfull \hbox (badness 6380) in paragraph at lines 42334--42366 \OT1/cmr/m/n/10 and Rank-ingxtfrm xtfrm.AsIsxtfrmxtfrm.AsIs xtfrm.Datextfrmxtfr m.Date Underfull \hbox (badness 10000) in paragraph at lines 42334--42366 \OT1/cmr/m/n/10 xtfrm.defaultxtfrmxtfrm.default xtfrm.difftimextfrmxtfrm.diffti me Underfull \hbox (badness 10000) in paragraph at lines 42334--42366 \OT1/cmr/m/n/10 xtfrm.factorxtfrmxtfrm.factor xtfrm.POSIXctxtfrmxtfrm.POSIXct Underfull \hbox (badness 4595) in paragraph at lines 42334--42366 \OT1/cmr/m/n/10 xtfrm.POSIXltxtfrmxtfrm.POSIXlt xtfrm.Survxtfrmxtfrm.Surv uni-v arxtfrm ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42369 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42371 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42372 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42373 \item[\code{x}] an \R{} object. ! Undefined control sequence. l.42373 \item[\code{x}] an \R {} object. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42374 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42375 \e cross references,] insertions,nd{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42377 \begin{Details} \relax ! Undefined control sequence. l.42379 \code {\LinkA{rank}{rank}} is more suitable to be made generic. The ... ! Undefined control sequence. l.42379 \code{\LinkA {rank}{rank}} is more suitable to be made generic. The ... ! Undefined control sequence. l.42380 method is similar to \code {rank(x, ties.method = "min", ! Undefined control sequence. l.42381 na.last = "keep")}, so \code {NA} values are given rank \code{NA}... ! Undefined control sequence. l.42381 ...o \code{NA} values are given rank \code {NA} and all ! Undefined control sequence. l.42384 The \code {\LinkA{factor}{factor}} method extracts the codes. The ! Undefined control sequence. l.42384 The \code{\LinkA {factor}{factor}} method extracts the codes. The ! Undefined control sequence. l.42385 \code {\LinkA{Surv}{Surv}} method sorts first on times and then on ! Undefined control sequence. l.42385 \code{\LinkA {Surv}{Surv}} method sorts first on times and then on ! Undefined control sequence. l.42386 status code(s), finally on \code {timme2} if present. Note that with ! Undefined control sequence. l.42391 \code {\LinkA{is.numeric}{is.numeric}(x)} is true but otherwise make ... ! Undefined control sequence. l.42391 \code{\LinkA {is.numeric}{is.numeric}(x)} is true but otherwise make ... ! Undefined control sequence. l.42392 \code {==} and \code{>} methods for the class of \code{x[i]} (for ! Undefined control sequence. l.42392 \code{==} and \code {>} methods for the class of \code{x[i]} (for ! Undefined control sequence. l.42392 ...\code{>} methods for the class of \code {x[i]} (for ! Undefined control sequence. l.42393 integers \code {i}), and the \code{is.na} method for the class of ! Undefined control sequence. l.42393 integers \code{i}), and the \code {is.na} method for the class of ! Undefined control sequence. l.42394 \code {x}, but might be rather slow when doing so. ! Undefined control sequence. l.42396 This is an \LinkA {internal generic}{internal generic} \LinkA{primiti... ! Undefined control sequence. l.42396 ...ernal generic}{internal generic} \LinkA {primitive}{primitive}, so... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42398 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42400 \begin{Value} ! Undefined control sequence. l.42401 ...ger) vector of the same length as \code {x}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42402 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanat (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.texion. Type H for immediate help. ... l.42404 \begin{SeeAlso} \relax ! Undefined control sequence. l.42405 \code {\LinkA{rank}{rank}}, \code{\LinkA{sort}{sort}}, \code{\LinkA{o... ! Undefined control sequence. l.42405 \code{\LinkA {rank}{rank}}, \code{\LinkA{sort}{sort}}, \code{\LinkA{o... ! Undefined control sequence. l.42405 \code{\LinkA{rank}{rank}}, \code {\LinkA{sort}{sort}}, \code{\LinkA{o... ! Undefined control sequence. l.42405 \code{\LinkA{rank}{rank}}, \code{\LinkA {sort}{sort}}, \code{\LinkA{o... ! Undefined control sequence. l.42405 ...ank}}, \code{\LinkA{sort}{sort}}, \code {\LinkA{order}{order}}. ! Undefined control sequence. l.42405 ...\code{\LinkA{sort}{sort}}, \code{\LinkA {order}{order}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42406 \end{SeeAlso} ! Undefined control sequence. l.42407 \HeaderA {zapsmall}{Rounding of Numbers}{zapsmall} ! Undefined control sequence. l.42408 \keyword {arith}{zapsmall} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42410 \begin{Description} \relax ! Undefined control sequence. l.42411 \code {zapsmall} determines a \code{digits} argument \code{dr} for ! Undefined control sequence. l.42411 \code{zapsmall} determines a \code {digits} argument \code{dr} for ! Undefined control sequence. l.42411 ...termines a \code{digits} argument \code {dr} for ! Undefined control sequence. l.42412 calling \code {round(x, digits = dr)} such that values close to ! Undefined control sequence. l.42414 i.e., treated as \code {0}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42415 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42417 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42421 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42423 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42424 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion f This is `epsf.tex' v2.7.4 <14 February 2011> ) [165 localization,or explanation. Type H for immediate help. ... l.42425 \item[\code{x}] a numeric or complex vector. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42426 \item[\code{digits}] integer indicating the precision to be used. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42427 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42428 \end{Arguments} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42430 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42434 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42436 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42437 \begin{ExampleCode} ! Missing $ inserted. $ l.42438 x2 <- pi * 100^ (-1:3) ! Missing $ inserted. $ l.42441 [409] formatting,] and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.aux ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42443 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42444 \end{Examples} ! Undefined control sequence. l.42445 \HeaderA {zpackages}{Listing of Packages}{zpackages} ! Undefined control sequence. l.42446 \aliasA {.packages}{zpackages}{.packages} ! Undefined control sequence. l.42447 \keyword {data}{zpackages} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42449 \begin{Description} \relax ! Undefined control sequence. l.42450 \code {.packages} returns information about package availability. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42451 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42453 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42457 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42459 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42460 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42461 \item[\code{all.available}] logical; if \code{TRUE} return a charact... ! Undefined control sequence. l.42461 ...\code{all.available}] logical; if \code {TRUE} return a character ... ! Undefined control sequence. l.42462 of all available packages in \code {lib.loc}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42463 \item[\code{lib.loc}] a character vector describing the location of ... ! Undefined control sequence. l.42463 ...er vector describing the location of \R {} ! Undefined control sequence. l.42464 library trees to search through, or \code Overfull \hbox (22.06111pt too wide) in paragraph at lines 14306--14306 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [166 {NULL}. The default value ! Undefined control sequence. l.42465 of \code {NULL} corresponds to \code{\LinkA{.libPaths}{.libPaths}()}. ! Undefined control sequence. l.42465 of \code{NULL} corresponds to \code {\LinkA{.libPaths}{.libPaths}()}. ! Undefined control sequence. l.42465 of \code{NULL} corresponds to \code{\LinkA {.libPaths}{.libPaths}()}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42466 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42467 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42469 \begin{Details} \relax ! Undefined control sequence. l.42470 \code {.packages()} returns the names of the currently ! Undefined control sequence. l.42472 \code {.packages(all.available = TRUE)} gives (visibly) \emph{all} ! Undefined control sequence. l.42473 ...able in the library location path \code {lib.loc}. ! Undefined control sequence. l.42478 directory name: use \code {\LinkA{find.package}{find.package}} to con... ! Undefined control sequence. l.42478 directory name: use \code{\LinkA {find.package}{find.package}} to con... ! Undefined control sequence. l.42479 metadata match or \code {\LinkA{installed.packages}{installed.package... ! Undefined control sequence. l.42479 metadata match or \code{\LinkA {installed.packages}{installed.package... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42481 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42483 \begin{Value} ! Undefined control sequence. l.42485 \code {all.available = TRUE}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42486 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42488 \begin{Note} \relax ! Undefined control sequence. l.42489 \code {.packages(all.available = TRUE)} is not a way to find out if a ! Undefined control sequence. l.42492 incomplete test. See the help for \code {\LinkA{find.package}{find.p... ! Undefined control sequence. l.42492 ...te test. See the help for \code{\LinkA {find.package}{find.packag... ! Undefined control sequence. l.42493 \code {\LinkA{require}{require}} should be used. ! Undefined control sequence. l.42493 \code{\LinkA {require}{require}} should be used. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42494 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42496 \begin{Author} \relax ! Undefined control sequence. l.42498 Guido Masarotto for the \code {all.available = TRUE} part of ! Undefined control sequence. l.42499 \code {.packages}. ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42500 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42502 \begin{SeeAlso} \relax ! Undefined control sequence. l.42503 \code {\LinkA{library}{library}}, \code{\LinkA{.libPaths}{.libPaths}}, ! Undefined control sequence. l.42503 \code{\LinkA {library}{library}}, \code{\LinkA{.libPaths}{.libPaths}}, ! Undefined control sequence. l.42503 \code{\LinkA{library}{library}}, \code {\LinkA{.libPaths}{.libPaths}}, ! Undefined control sequence. l.42503 ...\LinkA{library}{library}}, \code{\LinkA {.libPaths}{.libPaths}}, ! Undefined control sequence. l.42504 \code {\LinkA{installed.packages}{installed.packages}}. ! Undefined control sequence. l.42504 \code{\LinkA {installed.packages}{installed.packages}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42505 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42507 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42508 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.42509 (.packages()) # maybe just "base" ! You can't use `macro parameter character #' in horizontal mode. l.42510 .packages(all.available = TRUE) # return all available as character ... ! You can't use `macro parameter character #' in horizontal mode. l.42512 (.packages()) # "splines", too ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42514 \end{ExampleCode} ! LaTeX Error: \begin{document} ende]d by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42515 \end{Examples} ! Undefined control sequence. l.42516 \HeaderA {zutils}{Miscellaneous Internal/Programming Utilities}{zutils} ! Undefined control sequence. l.42517 \aliasA {.standard\_regexps}{zutils}{.standard.Rul.regexps} ! Undefined control sequence. l.42518 \keyword {utilities}{zutils} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42520 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42522 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42524 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42528 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42530 \begin{Details} \relax ! Undefined control sequence. l.42531 \code {.standard\_regexps} returns a list of `standard' regexps, ! Undefined control sequence. l.42532 including elements named \code {valid\_package\_name} and ! Undefined control sequence. l.42533 \code {valid\_package\_version} with the obvious meanings. The regexps ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42535 \end{Details} [410]) (./compiler-pkg.tex Overfull \hbox (33.55849pt too wide) in paragraph at lines 14354--14354 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [167 Chapter 2. ! Undefined control sequence. l.3 \HeaderA {compile}{Byte Code Compiler}{compile} ! Undefined control sequence. l.4 \aliasA {cmpfile}{compile}{cmpfile} ! Undefined control sequence. l.5 \aliasA {cmpfun}{compile}{cmpfun} ! Undefined control sequence. l.6 \aliasA {compilePKGS}{compile}{compilePKGS} ! Undefined control sequence. l.7 \aliasA {disassemble}{compile}{disassemble} ! Undefined control sequence. l.8 \aliasA {enableJIT}{compile}{enableJIT} ! Undefined control sequence. l.9 \aliasA {getCompilerOption}{compile}{getCompilerOption} ! Undefined control sequence. l.10 \aliasA {loadcmp}{compile}{loadcmp} ! Undefined control sequence. l.11 \aliasA {setCompilerOptions}{compile}{setCompilerOptions} ! Undefined control sequence. l.12 \keyword {programming}{compile} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14 \begin{Description} \relax ! Undefined control sequence. l.15 ...n interface to a byte code compiler for \R {}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.18 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.31 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.35 \item[\code{f}] a closure. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.36 \item[\code{options}] list of named compiler options: see `Details'. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.37 \item[\code{env}] the top level environment for the compiling. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.38 \item[\code{srcref}] initial source reference for the expression. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.39 \item[\code{file,infile,outfile}] pathnames; outfile defaults to infile... ! Undefined control sequence. l.40 a \file {.Rc} extension in place of any existing extension. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.41 \item[\code{ascii}] logical; should the compiled file be saved in ascii... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42 \item[\code{verbose}] logical; should the compiler show what is being c... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.43 \item[\code{envir}] environment to evaluate loaded expressions in. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.44 \item[\code{chdir}] logical; change directory before evaluation? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.45 \item[\code{code}] byte code expression or compiled closure ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.46 \item[\code{e}] expression to compile. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.47 \item[\code{level}] integer; the JIT level to use (\code{0} to \code{3}). ! Undefined control sequence. l.47 ...vel}] integer; the JIT level to use (\code {0} to \code{3}). ! Undefined control sequence. l.47 ...r; the JIT level to use (\code{0} to \code {3}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.48 \item[\code{enable}] logical; enable compiling packages if \code{TRUE}. ! Undefined control sequence. l.48 ...ogical; enable compiling packages if \code {TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.49 \item[\code{name}] character string; name of option to return. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.50 \item[\code{...}] named compiler options to set. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.51 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.52 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.54 \begin{Details} \relax ! Undefined control sequence. l.55 The function \code {cmpfun} compiles the body of a closure and [411] ! Undefined control sequence. l.59 \code {compile} compiles an expression into a byte code object; the ! Undefined control sequence. l.60 object can then be evaluated with \code {eval}. ! Undefined control sequence. l.62 \code {cmpfile} parses the expressions in \code{infile}, compiles ! Undefined control sequence. l.62 ...e{cmpfile} parses the expressions in \code {infile}, compiles ! Undefined control sequence. l.63 ...d writes the compiled expressions to \code {outfile}. If ! Undefined control sequence. l.64 \code {outfile} is not provided, it is formed from \code{infile} by ! Undefined control sequence. l.64 ...} is not provided, it is formed from \code {infile} by ! Undefined control sequence. l.65 replacing or appending a \code {.Rc} suffix. ! Undefined control sequence. l.67 \code {loadcmp} is used to load compiled files. It is similar to ! Undefined control sequence. l.68 \code {sys.source}, except that its default loading environment is the ! Undefined control sequence. l.71 \code {disassemble} produces a printed representation of the code ! Undefined control sequence. l.74 \code {enableJIT} enables or disables just-in-time (JIT) ! Undefined control sequence. l.75 ...is disabled if the argument is 0. If \code {level} is ! Undefined control sequence. l.77 \code {level} is 2, then some small closures are also compiled before ! Undefined control sequence. l.78 their second use. If \code {level} is 3 then in addition ! Undefined control sequence. l.80 3 requires the compiler option \code {optimize} to be 2 or 3. The JIT ! Undefined control sequence. l.81 level can also be selected by starting \R {} with the environment ! Undefined control sequence. l.82 variable \code {R\_ENABLE\_JIT} set to one of these values. Calling ! Undefined control sequence. l.83 \code {enableJIT} with a negative argument returns the current JIT ! Undefined control sequence. l.84 level. The default JIT level is \code {3}. ! Undefined control sequence. l.86 \code {compilePKGS} enables or disables compiling packages when they ! Undefined control sequence. l.89 base. This can also be enabled by starting \R {} with the environment ! Undefined control sequence. l.90 variable \code {\_R\_COMPILE\_PKGS\_} set to a positive integer value. ! Undefined control sequence. l.93 time and space overhead. \code {R\_COMPILE\_PKGS} can be used, instead, ! Undefined control sequence. l.94 to instruct \code {INSTALL} to enable/disable compilation of packages ! Undefined control sequence. l.98 this by using \code {cat} to print messages. Eventually this should ! Undefined control sequence. l.101 The \code {options} argument can be used to control compiler operation. ! Undefined control sequence. l.102 There are currently three options: \code {optimize}, ! Undefined control sequence. l.103 \code {suppressAll}, and \code{suppressUndefined}. \code{optimize} ! Undefined control sequence. l.103 \code{suppressAll}, and \code {suppressUndefined}. \code{optimize} ! Undefined control sequence. l.103 ...All}, and \code{suppressUndefined}. \code {optimize} ! Undefined control sequence. l.104 ...optimization level, an integer from \code {0} to \code{3} ! Undefined contr [168]ol sequence. l.104 ... level, an integer from \code{0} to \code {3} ! Undefined control sequence. l.105 (the current out-of-the-box default is \code {2}). \code{suppressAll} ! Undefined control sequence. l.105 ...t-of-the-box default is \code{2}). \code {suppressAll} ! Undefined control sequence. l.106 should be a scalar logical; if \code {TRUE} no messages will be ! Undefined control sequence. l.107 shown. \code {suppressUndefined} can be \code{TRUE} to suppress all ! Undefined control sequence. l.107 shown. \code{suppressUndefined} can be \code {TRUE} to suppress all ! Undefined control sequence. l.111 \code {getCompilerOption} returns the value of the specified option. ! Undefined control sequence. l.113 \code {options} argument; the \code{options} argument is primarily for ! Undefined control sequence. l.113 \code{options} argument; the \code {options} argument is primarily for ! Undefined control sequence. l.114 internal use. \code {setCompilerOption} sets the default option ! Undefined control sequence. l.116 \code {setCompilerOptions(suppressAll = TRUE, optimize = 3)}. ! Undefined control sequence. l.121 \code {int} operands, and when compiled with \code{gcc} the internal ! Undefined control sequence. l.121 ...t} operands, and when compiled with \code {gcc} the internal ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.123 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.125 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.127 \end{Author} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.129 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.130 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.132 # a simple example [412] [169 ! You can't use `macro parameter character #' in vertical mode. l.138 # old R version of lapply ! You can't use `macro parameter character #' in horizontal mode. l.146 names(rval) <- names(X) # keep `names' ! ! You can't use `macro parameter character #' in horizontal mode. l.149 # a small variation ! You can't use `macro parameter character #' in horizontal mode. l.160 names(rval) <- names(X) # keep `names' ! ! You can't use `macro parameter character #' in horizontal mode. l.163 # Compiled versions ! You can't use `macro parameter character #' in horizontal mode. l.166 # some timings ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.183 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.184 \end{Examples} [413]]) (./datasets-pkg.tex [414]) Chapter 3. ! Undefined control sequence. l.3 \HeaderA {datasets-package}{The R Datasets Package}{datasets.Rdash.package} ! Undefined control sequence. l.4 \aliasA {datasets}{datasets-package}{datasets} ! Undefined control sequence. l.5 \keyword {package}{datasets-package} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.7 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.9 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.11 \begin{Details} \relax ! Undefined control sequence. l.13 list, use \code {library(help = "datasets")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.14 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.16 \begin{Author} \relax Underfull \hbox (badness 10000) in paragraph at lines 3--18 \OT1/cmr/m/n/10 datasets-packageThe R Datasets Pack-age-datasets.Rdash.package Underfull \hbox (badness 1701) in paragraph at lines 3--18 \OT1/cmr/m/n/10 datasetsdatasets-packagedatasets packagedatasets-package Base R datasets ! Undefined control sequence. l.19 Maintainer: R Core Team \email {R-core@r-project.org} ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.20 \end{Author} ! Undefined control sequence. l.21 \HeaderA {ability.cov}{Ability and Intelligence Tests}{ability.cov} ! Undefined control sequence. l.22 \keyword {datasets}{ability.cov} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.24 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.27 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.29 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.33 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H fo (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)r immediate help. ... l.35 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.52 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.54 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.60 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.62 \begin{References} \relax ! Undefined control sequence. l.64 Clocking \eqn {g}{}: relating intelligence and measures of timed ! Undefined control sequence. l.65 performance. \emph{Intelligence}, \bold {7}, 353--368. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.66 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.68 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.69 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.74 # # The signs of factors and hence the signs of correlations are ! You can't use `macro parameter character #' in horizontal mode. l.74 ## The signs of factors and hence the signs of correlations are ! You can't use `macro parameter character #' in horizontal mode. l.75 # # arbitrary with promax rotation. ! You can't use `macro parameter character #' in horizontal mode. l.75 ## arbitrary with promax rotation. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.77 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.78 \end{Examples} ! Undefined control sequence. l.79 \HeaderA {airmiles}{Passenger Miles on Commercial US Airlines, 1937--196... ! Undefined control sequence. l.80 \keyword {datasets}{airmiles} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.82 \begin{Description} Underfull \hbox (badness 10000) in paragraph at lines 14597--14604 @texttt internet/nanoftp.c[]@textrm '[], `@texttt src/modules/internet/nanohtt p.c[]@textrm '[] and `@texttt src/modules/ [170 \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.85 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.87 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.91 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.93 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.95 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.97 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.99 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.101 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.105 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.107 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.108 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.112 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.113 \end{Examples} ! Undefined control sequence. l.114 \HeaderA {AirPassengers}{Monthly Airline Passenger Numbers 1949-1960}{A... ! Undefined control sequence. l.115 \keyword {datasets}{AirPassengers} ! LaTeX Error: Environment Description u)ndefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.117 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.120 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.122 \begin{Usage} [415 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi]) [1]{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.126 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.128 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.130 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.132 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.136 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.138 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.139 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.140 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.140 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.141 # # These are quite slow and so not run by example(AirPassengers) ! You can't use `macro parameter character #' in horizontal mode. l.141 ## These are quite slow and so not run by example(AirPassengers) ! You can't use `macro parameter character #' in vertical mode. l.143 # # The classic 'airline model', by full ML ! You can't use `macro parameter character #' in vertical mode. l.143 ## The classic 'airline model', by full ML ! Missing $ inserted. $ l.151 ts.plot(AirPassengers, 10^ tl, 10^tu, log = "y", lty = c(1, 2, 2)) ! Missing $ inserted. $ l.152 ! You can't use `macro parameter character #' in vertical mode. l.153 # # full ML fit is the same if the series is reversed, CSS fit is not ! You can't use `macro parameter character #' in vertical mode. l.153 ## full ML fit is the same if the series is reversed, CSS fit is not Underfull \hbox (badness 2012) in paragraph at lines 153--159 []\OT1/cmr/m/n/10 full ML fit is the same if the se-ries is re-versed, CSS fit is not ! You can't use `macro parameter character #' in vertical mode. l.160 # # Structural Time Series ! You can't use `macro parameter character #' in vertical mode. l.160 ## Structural Time Series ! You can't use `macro parameter character #' in vertical mode. l.167 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.167 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.168 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.169 \end{Examples} ! Undefined control sequence. l.170 \HeaderA {airquality}{New York Air Quality Measurements}{airquality} ! Undefined control sequence. l.171 \keyword {datasets}{airquality} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.173 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.175 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.177 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.181 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.183 \begin{Format} ! Undefined control sequence. l.187 \Tabular {rlll}{ ! Undefined control sequence. l.188 \code {[,1]} & \code{Ozone} & numeric & Ozone (ppb)\\{} ! Misplaced alignment tab character &. l.188 \code{[,1]} & \code{Ozone} & numeric & Ozone (ppb)\\{} ! Undefined control sequence. l.188 \code{[,1]} & \code {Ozone} & numeric & Ozone (ppb)\\{} ! Misplaced alignment tab character &. l.188 \code{[,1]} & \code{Ozone} & numeric & Ozone (ppb)\\{} ! Misplaced alignment tab character &. l.188 \code{[,1]} & \code{Ozone} & numeric & Ozone (ppb)\\{} ! Undefined control sequence. l.189 \code {[,2]} & \code{Solar.R} & numeric & Solar R (lang)\\{} ! Misplaced alignment tab character &. l.189 \code{[,2]} & \code{Solar.R} & numeric & Solar R (lang)\\{} ! Undefined control sequence. l.189 \code{[,2]} & \code {Solar.R} & numeric & Solar R (lang)\\{} ! Misplaced alignment tab character &. l.189 \code{[,2]} & \code{Solar.R} & numeric & Solar R (lang)\\{} ! Misplaced alignment tab character &. l.189 \code{[,2]} & \code{Solar.R} & numeric & Solar R (lang)\\{} ! Undefined control sequence. l.190 \code {[,3]} & \code{Wind} & numeric & Wind (mph)\\{} ! Misplaced alignment tab character &. l.190 \code{[,3]} & \code{Wind} & numeric & Wind (mph)\\{} ! Undefined control sequence. l.190 \code{[,3]} & \code {Wind} & numeric & Wind (mph)\\{} ! Misplaced alignment tab character &. l.190 \code{[,3]} & \code{Wind} & numeric & Wind (mph)\\{} ! Misplaced alignment tab character &. l.190 \code{[,3]} & \code{Wind} & numeric & Wind (mph)\\{} ! Undefined control sequence. l.191 \code {[,4]} & \code{Temp} & numeric & Temper Underfull \hbox (badness 10000) in paragraph at lines 14721--14726 []@textrm Another (D)COM server, @texttt RDCOMServer[]@textrm , may be avail-a ble from Omega-hat, [171ature (degrees F)\\{} ! Misplaced alignment tab character &. l.191 \code{[,4]} & \code{Temp} & numeric & Temperature (degrees F)\\{} ! Undefined control sequence. l.191 \code{[,4]} & \code {Temp} & numeric & Temperature (degrees F)\\{} ! Misplaced alignment tab character &. l.191 \code{[,4]} & \code{Temp} & numeric & Temperature (degrees F)\\{} ! Misplaced alignment tab character &. l.191 \code{[,4]} & \code{Temp} & numeric & Temperature (degrees F)\\{} ! Undefined control sequence. l.192 \code {[,5]} & \code{Month} & numeric & Month (1--12)\\{} ! Misplaced alignment tab character &. l.192 \code{[,5]} & \code{Month} & numeric & Month (1--12)\\{} ! Undefined control sequence. l.192 \code{[,5]} & \code {Month} & numeric & Month (1--12)\\{} ! Misplaced alignment tab character &. l.192 \code{[,5]} & \code{Month} & numeric & Month (1--12)\\{} ! Misplaced alignment tab character &. l.192 \code{[,5]} & \code{Month} & numeric & Month (1--12)\\{} ! Undefined control sequence. l.193 \code {[,6]} & \code{Day} & numeric & Day of month (1--31) ! Misplaced alignment tab character &. l.193 \code{[,6]} & \code{Day} & numeric & Day of month (1--31) ! Undefined control sequence. l.193 \code{[,6]} & \code {Day} & numeric & Day of month (1--31) ! Misplaced alignment tab character &. l.193 \code{[,6]} & \code{Day} & numeric & Day of month (1--31) ! Misplaced alignment tab character &. l.193 \code{[,6]} & \code{Day} & numeric & Day of month (1--31) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.195 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.197 \begin{Details} \relax ! Undefined control sequence. \code l.203 \item \code {Ozone}: Mean ozone in parts per ! Undefined control sequence. \code l.205 \item \code {Solar.R}: Solar radiation ! Undefined control sequence. \code l.208 \item \code {Wind}: Average wind speed in miles ! Undefined control sequence. \code l.210 \item \code {Temp}: Maximum daily ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.215 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.217 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.221 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.223 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.227 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.229 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.230 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.233 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.234 \end{Examples} ! Undefined control sequence. l.235 \HeaderA {anscombe}{Anscombe's Quartet of `Identical' Simple Linear Reg... ! Undefined control sequence. l.236 \keyword {datasets}{anscombe} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.238 \begin{Description} \relax ! Undefined control sequence. l.239 Four \eqn {x}{}-\eqn{y}{} datasets which have the same traditional ! Undefined control sequence. l.239 Four \eqn{x}{}-\eqn {y}{} datasets which have the same traditional ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.242 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.244 \begin{Usage} [416] [172]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.248 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.250 \begin{Format} ! Undefined control sequence. l.253 \Tabular {rl}{ ! Misplaced alignment tab character &. l.254 x1 == x2 == x3 & the integers 4:14, specially arranged \\{} ! Misplaced alignment tab character &. l.255 x4 & values 8 and 19 \\{} ! Misplaced alignment tab character &. l.256 y1, y2, y3, y4 & numbers in (3, 12.5) with mean 7.5 and sdev 2.03} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.257 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.259 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.263 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.265 \begin{References} \relax ! Undefined control sequence. l.267 \emph{American Statistician}, \bold {27}, 17--21. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.268 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.270 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.271 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.275 # #-- now some "magic" to do the 4 regressions in a loop: ! You can't use `macro parameter character #' in vertical mode. l.275 ## -- now some "magic" to do the 4 regressions in a loop: ! You can't use `macro parameter character #' in horizontal mode. l.280 # # or ff[[2]] <- as.name(paste0("y", i)) ! You can't use `macro parameter character #' in horizontal mode. l.280 ## or ff[[2]] <- as.name(paste0("y", i)) ! You can't use `macro parameter character #' in horizontal mode. l.281 # # ff[[3]] <- as.name(paste0("x", i)) ! You can't use `macro parameter character #' in horizontal mode. l.281 ## ff[[3]] <- as.name(paste0("x", i)) Underfull \hbox (badness 1062) in paragraph at lines 275--285 \OT1/cmr/m/n/10 mods <- set-Names(as.l Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173ist(1:4), paste0("lm", 1:4)) for(i in 1:4 ) ff[2:3] <- ! You can't use `macro parameter character #' in vertical mode. l.286 # # See how close they are (numerically!) ! You can't use `macro parameter character #' in vertical mode. l.286 ## See how close they are (numerically!) ! You can't use `macro parameter character #' in vertical mode. l.290 # # Now, do what you should have done in the first place: PLOTS ! You can't use `macro parameter character #' in vertical mode. l.290 ## Now, do what you should have done in the first place: PLOTS ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.300 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.301 \end{Examples} ! Undefined control sequence. l.302 \HeaderA {attenu}{The Joyner--Boore Attenuation Data}{attenu} ! Undefined control sequence. l.303 \keyword {datasets}{attenu} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.305 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.310 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.312 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.316 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.318 \begin{Format} ! Undefined control sequence. l.321 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.322 [,1] & event & numeric & Event Number\\{} ! Misplaced alignment tab character &. l.322 [,1] & event & numeric & Event Number\\{} ! Misplaced alignment tab character &. l.322 [,1] & event & numeric & Event Number\\{} ! Misplaced alignment tab character &. l.323 [,2] & mag & numeric & Moment Magnitude\\{} ! Misplaced alignment tab character &. l.323 [,2] & mag & numeric & Moment Magnitude\\{} ! Misplaced alignment tab character &. l.323 [,2] & mag & numeric & Moment Magnitude\\{} ! Misplaced alignment tab character &. l.324 [,3] & station & factor & Station Number\\{} ! Misplaced alignment tab character &. l.324 [,3] & station & factor & Station Number\\{} ! Misplaced alignment tab character &. l.324 [,3] & station & factor & Station Number\\{} ! Misplaced alignment tab character &. l.325 [,4] & dist & numeric & Station-hypocenter distance (km)\\{} ! Misplaced alignment tab character ]&. l.325 [,4] & dist & numeric & Station-hypocenter distance (km)\\{} ! Misplaced alignment tab character &. l.325 [,4] & dist & numeric & Station-hypocenter distance (km)\\{} ! Misplaced alignment tab character &. l.326 [,5] & accel & numeric & Peak acceleration (g)} ! Misplaced alignment tab character &. l.326 [,5] & accel & numeric & Peak acceleration (g)} ! Misplaced alignment tab character &. l.326 [,5] & accel & numeric & Peak acceleration (g)} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.327 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.329 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.334 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.336 \begin{References} \relax ! Undefined control sequence. l.339 \emph{Bull. Seism. Soc. Am.}, \bold {72}, S269--S268. ! Undefined control sequence. l.344 \emph{Bull. Seism. Soc. Am.}, \bold {72}, 2307--2321. [417] [174 ! Undefined control sequence. l.350 \emph{Bull. Seism. Soc. Am.}, \bold {73}, 1481--1483. ! Undefined control sequence. l.354 \emph{Bull. Seism. Soc. Am.}, \bold {74}, 1441--1449. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.359 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.361 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.362 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.364 # # check the data class of the variables ! You can't use `macro parameter character #' in horizontal mode. l.364 ## check the data class of the variables ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.371 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.372 \end{Examples} ! Undefined control sequence. l.373 \HeaderA {attitude}{The Chatterjee--Price Attitude Data}{attitude} ! Undefined control sequence. l.374 \keyword {datasets}{attitude} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.376 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.382 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.384 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.388 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.390 \begin{Format} ! Undefined control sequence. l.395 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.396 Y & rating & numeric & Overall rating \\{} ! Misplaced alignment tab character &. l.396 Y & rating & numeric & Overall rating \\{} ! Misplaced alignment tab character &. l.396 Y & rating & numeric & Overall rating \\{} ! Misplaced alignment tab character &. l.397 X[1] & complaints& numeric & Handling of employee complaints \\{} ! Misplaced alignment tab character &. l.397 X[1] & complaints& numeric & Handling of employee complaints \\{} ! Misplaced alignment tab character &. l.397 X[1] & complaints& numeric & Handling of employee complaints \\{} ! Misplaced alignment tab character &. l.398 X[2] & privileges& numeric & Does not allow special privileges \\{} ! Misplaced alignment tab character &. l.398 X[2] & privileges& numeric & Does not allow special privileges \\{} ! Misplaced alignment tab character &. l.398 X[2] & privileges& numeric & Does not allow special privileges \\{} ! Misplaced alignment tab character &. l.399 X[3] & learning & numeric & Opportunity to learn \\{} ! Misplaced alignment tab character &. l.399 X[3] & learning & numeric & Opportunity to learn \\{} ! Misplaced alignment tab character &. l.399 X[3] & learning & numeric & Opportunity to learn \\{} ! Misplaced alignment tab character &. l.400 X[4] & raises & numeric & Raises based on performance \\{} ! Misplaced alignment tab character &. l.400 X[4] & raises & numeric & Raises based on performance \\{} ! Misplaced alignment tab character &. l.400 X[4] & raises & numeric & Raises based on performance \\{} ! Misplaced alignment tab character &. l.401 X[5] & critical & numeric & Too critical \\{} ! Misplaced alignment tab character &. l.401 X[5] & critical & numeric & Too critical \\{} ! Misplaced alignment tab character &. l.401 X[5] & critical & numeric & Too critical \\{} ! Misplaced alignment tab character &. l.402 X[6] & advancel & numeric & Advancement} ! Misplaced alignment tab character &. l.402 X[6] & advancel & numeric & Advancement} ! Misplaced alignment tab character &. l.402 X[6] & advancel & numeric & Advancement} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.403 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.405 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.410 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.412 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.413 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.424 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples] (Function and variable index) [175]}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.425 \end{Examples} ! Undefined control sequence. l.426 \HeaderA {austres}{Quarterly Time Series of the Number of Australian Re... ! Undefined control sequence. l.427 \keyword {datasets}{austres} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.429 \begin{Description} \relax ! Undefined control sequence. l.431 ...March 1994. The object is of class \code {"ts"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.432 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.434 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.438 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.440 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.444 \end{Source} ! Undefined control sequence. l.445 \HeaderA {beavers}{Body Temperature Series of Two Beavers}{beavers} ! Undefined control sequence. l.446 \aliasA {beaver1}{beavers}{beaver1} ! Undefined control sequence. l.447 \aliasA {beaver2}{beavers}{beaver2} ! Undefined control sequence. l.448 \keyword {datasets}{beavers} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.450 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.456 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.458 \begin{Usage} [418 (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.vrs] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.463 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.465 \begin{Format} ! Undefined control sequence. l.466 The \code {beaver1} data frame has 114 rows and 4 columns on body ! Undefined control sequence. l.469 The \code {beaver2} data frame has 100 rows and 4 columns on body ! Undefined control sequence. l.476 1990), December 12--13 (\code {beaver1}) and November 3--4 ! Undefined control sequence. l.477 (\code {beaver2}). ! Undefined control sequence. l.478 ...e] Time of observation, in the form \code {0330} for ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.485 \end{Format} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.487 \begin{Note} \relax ! Undefined control sequence. l.488 The observation at 22:20 is missing in \code {beaver1}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.489 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.491 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.497 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.499 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.500 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.507 # Hours since start of day: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.520 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.521 \end{Examples} ! Undefined control sequence. l.522 \HeaderA {BJsales}{Sales Data with Leading Indicator}{BJsales} ! Undefined control sequence. l.523 \methaliasA {BJsales.lead}{BJsales}{BJsales.lead} ! Undefined control sequence. l.524 \keyword {datasets}{BJsales} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.526 \begin{Description} \relax ! Undefined control sequence. l.527 The sales time series \code {BJsales} and leading indicator ! Undefined control sequence. l.528 \code {BJsales.lead} each contain 150 observations. ! Undefined control sequence. l.529 The objects are of class \code {"ts"}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.530 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.532 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.537 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.539 \begin{Source} \relax ! Undefined control sequence. l.542 \url {http://www-personal.buseco.monash.edu.au/~hyndman/TSDL/} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.543 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.545 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.553 \end{References} ! Undefined control sequence. l.554 \HeaderA {BOD}{ Biochemical Oxygen Demand }{BOD} ! Undefined control sequence. l.555 \keyword {datasets}{BOD} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.557 \begin{Description} \relax ! Undefined control sequence. l.558 The \code {BOD} data frame has 6 rows and 2 columns giving the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.561 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.563 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.567 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.569 \begin{Format} ! Undefined control sequence. \code {Time} l.573 \item[\code{Time}] ! Undefined control sequence. \code {demand} l.576 \item[\code{demand}] ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.582 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.584 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.592 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.594 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.595 \begin{ExampleCode} [419] ! You can't use `macro parameter character #' in horizontal mode. l.598 # simplest form of fitting a first-order model to these data ! You can't use `macro parameter character #' in horizontal mode. l.603 # using the plinear algorithm ! You can't use `macro parameter character #' in horizontal mode. l.606 # using a self-starting model ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.610 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.611 \end{Examples} ! Undefined control sequence. l.612 \HeaderA {cars}{Speed and Stopping Distances of Cars}{cars} ! Undefined control sequence. l.613 \keyword {datasets}{cars} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.615 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.618 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.620 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.624 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.626 \begin{Format} ! Undefined control sequence. l.629 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.630 [,1] & speed & numeric & Speed (mph)\\{} ! Misplaced alignment tab character &. l.630 [,1] & speed & numeric & Speed (mph)\\{} ! Misplaced alignment tab character &. l.630 [,1] & speed & numeric & Speed (mph)\\{} ! Misplaced alignment tab character &. l.631 [,2] & dist & numeric & Stopping distance (ft) ! Misplaced alignment tab character &. l.631 [,2] & dist & numeric & Stopping distance (ft) ! Misplaced alignment tab character &. l.631 [,2] & dist & numeric & Stopping distance (ft) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.633 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.635 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.639 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.641 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.645 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.647 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.648 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.664 # # An example of polynomial regression ! You can't use `macro parameter character #' in vertical mode. l.664 ## An example of polynomial regression ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.674 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.675 \end{Examples} ! Undefined control sequence. l.676 \HeaderA {ChickWeight}{Weight versus age of chicks on different diets}{... ! Undefined control sequence. l.677 \keyword {datasets}{ChickWeight} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.679 \begin{Description} \relax ! Undefined control sequence. l.680 The \code {ChickWeight} data frame has 578 rows and 4 columns from an ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.682 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.684 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.688 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.690 \begin{Format} ! Undefined control sequence. l.692 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! Undefined control sequence. l.705 \code {18} < \dots < \code{48} ! Undefined control sequence. l.705 \code{18} < \dots < \code {48} [420 [176] ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.718 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.720 \begin{Details} \relax ! Undefined control sequence. l.725 ...aset was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.726 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.726 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.726 ...for \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.727 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.728 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.730 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.739 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.741 \begin{SeeAlso} \relax ! Undefined control sequence. l.742 \code {\LinkA{SSlogis}{SSlogis}} for models fitted to this dataset. ! Undefined control sequence. l.742 \code{\LinkA {SSlogis}{SSlogis}} for models fitted to this dataset. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.743 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.745 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.746 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.751 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.752 \end{Examples} ! Undefined control sequence. l.753 \HeaderA {chickwts}{Chicken Weights by Feed Type}{chickwts} ! Undefined control sequence. l.754 \keyword {datasets}{chickwts} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.756 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.759 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.761 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.765 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.767 \begin{Format} ! Undefined control sequence. \code {weight} l.771 \item[\code{weight}] a numeric variable giving the chick weight. ! Undefined control sequence. \code {feed} l.772 \item[\code{feed}] a factor giving the feed type. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.776 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.778 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.782 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.784 \begin{Source} \relax ! Undefined control sequence. l.786 \emph{Biometrika}, \bold {35}, 214. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.787 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.789 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.793 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.795 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.796 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.806 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.807 \end{Examples} ! Undefined control sequence. l.808 \HeaderA {CO2}{Carbon Dioxide Uptake in Grass Plants}{CO2} ! Undefined control sequence. l.809 \keyword {datasets}{CO2} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.811 \begin{Description} \relax ! Undefined control sequence. l.812 The \code {CO2} data frame has 84 rows and 5 columns of data from an ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.815 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.817 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.821 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.823 \begin{Format} ! Undefined control sequence. l.825 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! Undefined control sequence. l.831 \code {Qn1} < \code{Qn2} < \code{Qn3} < \dots < \code{Mc1} ! Undefined control sequence. l.831 \code{Qn1} < \code {Qn2} < \code{Qn3} < \dots < \code{Mc1} ! Undefined control sequence. l.831 \code{Qn1} < \code{Qn2} < \code {Qn3} < \dots < \code{Mc1} ! Undefined control sequence. l.831 ...< \code{Qn2} < \code{Qn3} < \dots < \code {Mc1} ! Undefined control sequence. l.836 \code {Quebec} ! Undefined control sequence. l.837 \code {Mississippi} ! Undefined control sequence. l.842 \code {nonchilled} ! Undefined control sequence. l.843 \code {chilled} ! Undefined control sequence. l.850 (\eqn {\mu\mbox{mol}/m^2}{} sec). ! Missing $ inserted. $ l.850 (\eqn{\mu \mbox{mol}/m^2}{} sec). ! Extra }, or forgotten $. l.850 (\eqn{\mu\mbox{mol}/m^2} {} sec). ! Missing $ inserted. $ l.851 ! Missing } inserted. } l.851 ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.855 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.857 \begin{Details} \relax ! Undefined control sequence. l.858 The \eqn {CO_2}{} uptake of six plants from Quebec and six plants ! Missing $ inserted. $ l.858 The \eqn{CO_ 2}{} uptake of six plants from Quebec and six plants ! Extra }, or forgotten $. l.858 The \eqn{CO_2} {} uptake of six plants from Quebec and six plants ! Undefined control sequence. l.860 \eqn {CO_2}{} concentration. Half the plants of each type were ! Missing $ inserted. $ l.862 Overfull \hbox (595.81288pt too wide) in paragraph at lines 858--862 \OT1/cmr/m/n/10 The CO$[][]\OML/cmm/m/it/10 uptakeofsixplantsfromQuebecandsixpl antsfromMississippiwasmeasuredatseverallevelsofambient[][]concentration:Halfthe plantsofeachtypewerechilledovernightbeforetheexperimentwasconducted:$ ! Undefined control sequence. l.863 ...aset was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.864 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.864 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.864 ...for \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.865 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.866 \end{Details} ! Missing } inserted. } l.866 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.868 \begin{Source} \relax ! Undefined control sequence. l.872 \bold {71}, 1389--1400. [421}]] [2] ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.876 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.878 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.879 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.883 # # fit the data for the first plant ! You can't use `macro parameter character #' in horizontal mode. l.883 ## fit the data for the first plant ! You can't use `macro parameter character #' in horizontal mode. l.887 # # fit each plant separately ! You can't use `macro parameter character #' in horizontal mode. l.887 ## fit each plant separately ! You can't use `macro parameter character #' in math mode. l.893 # # check the coefficients by plant ! You can't use `macro parameter character #' in math mode. l.893 ## check the coefficients by plant ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.895 \end{ExampleCode} ! Missing $ inserted. $ l.895 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.896 \end{Examples} ! Undefined control sequence. l.897 \HeaderA {co2}{Mauna Loa Atmospheric CO2 Concentration}{co2} ! Undefined control sequence. l.898 \keyword {datasets}{co2} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.900 \begin{Description} \relax ! Undefined control sequence. l.901 Atmospheric concentrations of CO\eqn {_2}{} are expressed in parts per ! Missing $ inserted. $ l.901 Atmospheric concentrations of CO\eqn{_ 2}{} are expressed in parts per ! Extra }, or forgotten $. l.901 Atmospheric concentrations of CO\eqn{_2} {} are expressed in parts per ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.904 \end{Description} ! Missing $ inserted. $ l.904 \end{Description} ! Missing } inserted. } l.904 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.906 \begin{Usage} Underfull \hbox (badness 4792) in paragraph at lines 882--] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toc907 \OT1/cmr/m/n/10 type = "b") fit the data for the first plant fm1 <- nls(uptake Underfull \hbox (badness 3690) in paragraph at lines 882--907 \OT1/cmr/m/n/10 sum-mary(fm1) fit each plant sep-a-rately fm-list <- list() fo r (pp in Overfull \hbox (438.79109pt too wide) in paragraph at lines 882--907 \OT1/cmr/m/n/10 levels(CO2$\OML/cmm/m/it/10 Plant\OT1/cmr/m/n/10 ))[]\OML/cmm/m /it/10 checkthecoefficientsbyplantprint\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 sapply \OT1/cmr/m/n/10 (\OML/cmm/m/it/10 fmlist; coef\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; digits \OT1/cmr/m/n/10 = Underfull \hbox (badness 10000) in paragraph at lines 882--907 \OT1/cmr/m/n/10 3)$ co2Mauna Loa At-mo-spheric CO2 Con-cen-tra- Underfull \hbox (badness 10000) in paragraph at lines 882--907 \OT1/cmr/m/n/10 tionco2 datasetsco2 At-mo-spheric con-cen-tra-tions of Overfull \hbox (151.3359pt too wide) in paragraph at lines 882--907 \OT1/cmr/m/n/10 CO$[][]\OML/cmm/m/it/10 areexpressedinpartspermillion\OT1/cmr/m /n/10 (\OML/cmm/m/it/10 ppm\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 andreportedinthepr eliminary\OT1/cmr/m/n/10 1997\OML/cmm/m/it/10 SIOmanometricmolefractionscale:$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.910 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.912 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.914 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.916 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.920 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.922 \begin{Source} \relax ! Undefined control sequence. l.928 \url {ftp://cdiac.esd.ornl.gov/pub/maunaloa-co2/maunaloa.co2}. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.929 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.931 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.935 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.937 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.938 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.943 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.944 \end{Examples} ! Undefined control sequence. l.945 \HeaderA {crimtab}{Student's 3000 Criminals Data}{crimtab} ! Undefined control sequence. l.946 \keyword {datasets}{crimtab} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.948 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.951 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.953 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.957 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.959 \begin{Format} ! Undefined control sequence. l.960 A \code {\LinkA{table}{table}} object of \code{\LinkA{integer}{integer... ! Undefined control sequence. l.960 A \code{\LinkA {table}{table}} object of \code{\LinkA{integer}{integer... ! Undefined control sequence. l.960 ...de{\LinkA{table}{table}} object of \code {\LinkA{integer}{integer}}... ! Undefined control sequence. l.960 ...kA{table}{table}} object of \code{\LinkA {integer}{integer}} counts... ! Undefined control sequence. l.961 \eqn {42 \times 22}{} with a total count, \code{sum(crimtab)} of ! Missing $ inserted. $ l.961 \eqn{42 \times 22}{} with a total count, \code{sum(crimtab)} of ! Extra }, or forgotten $. l.961 \eqn{42 \times 22} {} with a total count, \code{sum(crimtab)} of ! Undefined control sequence. l.961 ...42 \times 22}{} with a total count, \code {sum(crimtab)} of ! Missing $ inserted. $ l.963 Underfull \hbox (badness 10000) in paragraph at lines 960--963 \OT1/cmr/m/n/10 A tabletable ob-ject of in-te-gerin-te-ger counts, of di-men-si on 42 ! Undefined control sequence. l.964 The 42 \code {\LinkA{rownames}{rownames}} (\code{"9.4"}, \code{"9.5"}, ... ! Undefined control sequence. l.964 The 42 \code{\LinkA {rownames}{rownames}} (\code{"9.4"}, \code{"9.5"}, ... ! Undefined control sequence. l.964 ... \code{\LinkA{rownames}{rownames}} (\code {"9.4"}, \code{"9.5"}, \dots) ! Undefined control sequence. l.964 ...rownames}{rownames}} (\code{"9.4"}, \code {"9.5"}, \dots) ! Undefined control sequence. l.966 whereas the 22 column names (\code {\LinkA{colnames}{colnames}}) ! Undefined control sequence. l.966 whereas the 22 column names (\code{\LinkA {colnames}{colnames}}) ! Undefined control sequence. l.967 (\code {"142.24"}, \code{"144.78"}, \dots) correspond to (body) heights ! Undefined control sequence. l.967 (\code{"142.24"}, \code {"144.78"}, \dots) correspond to (body) heights ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.969 \end{Format} ! Missing } inserted. } l.969 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.971 \begin{Details} \relax [422] [-1 ! Undefined control sequence. l.996 has \eqn {4' 7''9/16 -- 8''9/16}{}, we have 142.24 which is 2.54*56 = ! Undefined control sequence. l.997 2.54*(\eqn {4' 8''}{}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1005 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1007 \begin{Source} \relax ! Undefined control sequence. l.1008 \url {http://pbil.univ-lyon1.fr/R/donnees/criminals1902.txt} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1010 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1012 \begin{References} \relax ! Undefined control sequence. l.1017 and Ireland} \bold {30}, 161--198. ! Undefined control sequence. l.1021 \emph{Biometrika} \bold {1}, 2, 177--227. ! Undefined control sequence. l.1024 \emph{Biometrika} \bold {6}, 1--25. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1025 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1027 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1028 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1032 # # for nicer printing: ! You can't use `macro parameter character #' in horizontal mode. l.1032 ## for nicer printing: ! You can't use `macro parameter character #' in vertical mode. l.1038 # # Repeat Student's experiment: ! You can't use `macro parameter character #' in vertical mode. l.1038 ## Repeat Student's experiment: ! You can't use `macro parameter character #' in vertical mode. l.1040 # 1) Reconstitute 3000 raw data for heights in inches and rounded to ! You can't use `macro parameter character #' in horizontal mode. l.1041 # nearest integer as in Student's paper: Underfull \hbox (badness 10000) in paragraph at lines 1043--1045 []\OT1/cmr/m/n/10 (heIn <- round(as.numeric(colnames(crimtab)) / 2.54)) d.hei < - ! You can't use `macro parameter character #' in vertical mode. l.1046 # 2) shuffle the data: ! You can't use `macro parameter character #' in vertical mode. l.1051 # 3) Make 750 samples each of size 4: ! Missing $ inserted. $ l.1054 ! You can't use `macro parameter character #' in vertical mode. l.1055 # 4) Compute the means and standard deviations (n) for the 750 samples: Underfull \hbox (badness 1097) in paragraph at lines 1057--1059 []\OT1/cmr/m/n/10 h.mean <- with(d.hei, tap-ply(height, sam-ple, FUN = mean)) h .sd <- ! You can't use `macro parameter character #' in vertical mode. l.1060 # 5) Compute the difference between the mean of each sample and ! You can't use `macro parameter character #' in horizontal mode. l.1061 # the mean of the population and then divide by the ! You can't use `macro parameter character #' in horizontal mode. l.1062 # standard deviation of the sample: ! You can't use `macro parameter character #' in vertical mode. l.1066 # 6) Replace infinite values by +/- 6 as in Student's paper: ! You can't use `macro parameter character #' in horizontal mode. l.1068 zobs[infZ <- is.infinite(zobs)] # 3 of them ! You can't use `macro parameter character #' in vertical mode. l.1071 # 7) Plot the distribution: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1077 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1078 \end{Examples} ! Undefined control sequence. l.1079 \HeaderA {discoveries}{Yearly Numbers of Important Discoveries}{discov... ! Undefined control sequence. l.1080 \keyword {datasets}{discoveries} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1082 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1085 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1087 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1091 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1093 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1095 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1097 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1099 \end{Source} ! LaTeX Error: Environment Refe [177rences undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1101 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1105 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1107 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1108 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1113 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1114 \end{Examples} ! Undefined control sequence. l.1115 \HeaderA {DNase}{Elisa assay of DNase}{DNase} ! Undefined control sequence. l.1116 \keyword {datasets}{DNase} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1118 \begin{Description} \relax ! Undefined control sequence. l.1119 The \code {DNase} data frame has 176 rows and 3 columns of data ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1122 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1124 \begin{Usage} [423]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1128 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1130 \begin{Format} ! Undefined control sequence. l.1132 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! Undefined control sequence. l.1137 an ordered factor with levels \code {10} < \dots < \code{3} ! Undefined control sequence. l.1137 ...or with levels \code{10} < \dots < \code {3} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1152 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1154 \begin{Details} \relax ! Undefined control sequence. l.1155 ...set was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.1156 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.1156 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.1156 ...or \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.1157 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1158 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1160 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1168 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1170 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1171 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1178 # # fit a representative run ! You can't use `macro parameter character #' in horizontal mode. l.1178 ## fit a representative run ! You can't use `macro parameter character #' in horizontal mode. l.1181 # # compare with a four-parameter logistic ! You can't use `macro parameter character #' in horizontal mode. l.1181 ## compare with a four-parameter logistic ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1186 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1187 \end{Examples} ! Undefined control sequence. l.1188 \HeaderA {esoph}{Smoking, Alcohol and (O)esophageal Cancer}{esoph} ! Undefined control sequence. l.1189 \keyword {datasets}{esoph} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1191 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1194 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1196 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1200 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1202 \begin{Format} ! Undefined control sequence. l.1206 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.1207 [,1] & "agegp" & Age group & 1 25--34 years\\{} ! Misplaced alignment tab character &. l.1207 [,1] & "agegp" & Age group & 1 25--34 years\\{} ! Misplaced alignment tab character &. l.1207 [,1] & "agegp" & Age group & 1 25--34 years\\{} ! Misplaced alignment tab character &. l.1208 & & & 2 35--44\\{} ! Misplaced alignment tab character &. l.1208 & & & 2 35--44\\{} ! Misplaced alignment tab character &. l.1208 & & & 2 35--44\\{} ! Misplaced alignment tab character &. l.1209 & & & 3 45--54\\{} ! Misplaced alignment tab character &. l.1209 & & & 3 45--54\\{} ! Misplaced alignment tab character &. l.1209 & & & 3 45--54\\{} ! Misplaced alignment tab character &. l.1210 & & & 4 55--64\\{} ! Misplaced alignment tab character &. l.1210 & & & 4 55--64\\{} ! Misplaced alignment tab character &. l.1210 & & & 4 55--64\\{} ! Misplaced alignment tab character &. l.1211 & & & 5 65--74\\{} ! Misplaced alignment tab character &. l.1211 & & & 5 65--74\\{} ! Misplaced alignment tab character &. l.1211 & & & 5 65--74\\{} ! Misplaced alignment tab character &. l.1212 & & & 6 75+\\{} ! Misplaced alignment tab character &. l.1212 & & & 6 75+\\{} ! Misplaced alignment tab character &. l.1212 & & & 6 75+\\{} ! Misplaced alignment tab character &. l.1213 [,2] & "alcgp" & Alcohol consumption & 1 0--39 gm/day\\{} ! Misplaced alignment tab character &. l.1213 [,2] & "alcgp" & Alcohol consumption & 1 0--39 gm/day\\{} ! Misplaced alignment tab character &. l.1213 [,2] & "alcgp" & Alcohol consumption & 1 0--39 gm/day\\{} ! Misplaced alignment tab character &. l.1214 & & & 2 40--79\\{} ! Misplaced alignment tab character &. l.1214 & & & 2 40--79\\{} ! Misplaced alignment tab character &. l.1214 & & & 2 40--79\\{} ! Misplaced alignment tab character &. l.1215 & & & 3 80--119\\{} ! Misplaced alignment tab character &. l.1215 & & & 3 80--119\\{} ! Misplaced alignment tab character &. l.1215 & & & 3 80--119\\{} ! Misplaced alignment tab character &. l.1216 & & & 4 120+\\{} ! Misplaced alignment tab character &. l.1216 & & & 4 120+\\{} ! Misplaced alignment tab character &. l.1216 & & & 4 120+\\{} ! Misplaced alignment tab character &. l.1217 [,3] & "tobgp" & Tobacco consumption & 1 0-- 9 gm/day\\{} ! Misplaced alignment tab character &. l.1217 [,3] & "tobgp" & Tobacco consumption & 1 0-- 9 gm/day\\{} ! Misplaced alignment tab character &. l.1217 [,3] & "tobgp" & Tobacco consumption & 1 0-- 9 gm/day\\{} ! Misplaced alignment tab character &. l.1218 & & & 2 10--19\\{} ! Misplaced alignment tab character &. l.1218 & & & 2 10--19\\{} ! Misplaced alignment tab character &. l.1218 & & & 2 10--19\\{} ! Misplaced alignment tab character &. l.1219 & & & 3 20--29\\{} ! Misplaced alignment tab character &. l.1219 & & & 3 20--29\\{} ! Misplaced alignment tab character &. l.1219 & & & 3 20--29\\{} ! Misplaced alignment tab character &. l.1220 & & & 4 30+\\{} ! Misplaced alignment tab character &. l.1220 & & & 4 30+\\{} ! Misplaced alignment tab character &. l.1220 & & & 4 30+\\{} ! Misplaced alignment tab character &. l.1221 [,4] & "ncases" & Number of cases & \\{} ! Misplaced alignment tab character &. l.1221 [,4] & "ncases" & Number of cases & \\{} ! Misplaced alignment tab character &. l.1221 [,4] & "ncases" & Number of cases & \\{} ! Misplaced alignment tab character &. l.1222 [,5] & "ncontrols" & Number of controls & ! Misplaced alignment tab character &. l.1222 [,5] & "ncontrols" & Number of controls & ! Misplaced alignment tab character &. l.1222 [,5] & "ncontrols" & Number of controls & ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1224 \end{Format} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1226 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1228 \end{Author} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1230 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [-2] l.1234 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1236 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1237 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1239 require(graphics) # for mosaicplot ! You can't use `macro parameter character #' in horizontal mode. l.1241 # # effects of alcohol, tobacco and interaction, age-adjusted ! You can't use `macro parameter character #' in horizontal mode. l.1241 ## effects of alcohol, tobacco and interaction, age-adjusted ! You can't use `macro parameter character #' in horizontal mode. l.1245 # # Try a linear effect of alcohol and tobacco ! You can't use `macro parameter character #' in horizontal mode. l.1245 ## Try a linear effect of alcohol and tobacco ! You can't use `macro parameter character #' in horizontal mode. l.1250 # # Re-arrange data for a mosaic plot ! You can't use `macro parameter character #' in horizontal mode. l.1250 ## Re-arrange data for a mosaic plot ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1259 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1260 \end{Examples} ! Undefined control sequence. l.1261 \HeaderA {euro}{Conversion Rates of Euro Currencies}{euro} ! Undefined control sequence. l.1262 \methaliasA {euro.cross}{euro}{euro.cross} ! Undefined control sequence. l.1263 \keyword {datasets}{euro} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1265 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1267 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1269 \begin{Usage} [424] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1274 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1276 \begin{Format} ! Undefined control sequence. l.1277 \code {euro} is a named vector of length 11, \code{euro.cross} a ! Undefined control sequence. l.1277 ...o} is a named vector of length 11, \code {euro.cross} a ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1279 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1281 \begin{Details} \relax ! Undefined control sequence. l.1282 The data set \code {euro} contains the value of 1 Euro in all ! Undefined control sequence. l.1291 The data set \code {euro.cross} contains conversion rates between the ! Undefined control sequence. l.1293 \code {outer(1 / euro, euro)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1294 \end{Details} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1296 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1297 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.1300 # # These relations hold: ! You can't use `macro parameter character #' in vertical mode. l.1300 ## These relations hold: ! You can't use `macro parameter character #' in horizontal mode. l.1301 euro == signif(euro, 6) # [6 digit precision in Euro's definition] ! You can't use `macro parameter character #' in vertical mode. l.1304 # # Convert 20 Euro to Belgian Franc ! You can't use `macro parameter character #' in vertical mode. l.1304 ## Convert 20 Euro to Belgian Franc ! You can't use `macro parameter character #' in horizontal mode. l.1306 # # Convert 20 Austrian Schilling to Euro ! You can't use `macro parameter character #' in horizontal mode. l.1306 ## Convert 20 Austrian Schilling to Euro ! You can't use `macro parameter character #' in horizontal mode. l.1308 # # Convert 20 Spanish Pesetas to Italian Lira ! You can't use `macro parameter character #' in horizontal mode. l.1308 ## Convert 20 Spanish Pesetas to Italian Lira ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1318 \end{ExampleCode} ! La]TeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1319 \end{Examples} ! Undefined control sequence. l.1320 \HeaderA {eurodist}{Distances Between European Cities and Between US C... ! Undefined control sequence. l.1321 \aliasA {UScitiesD}{eurodist}{UScitiesD} ! Undefined control sequence. l.1322 \keyword {datasets}{eurodist} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1324 \begin{Description} \relax ! Undefined control sequence. l.1325 The \code {eurodist} gives the road distances (in km) between 21 ! Undefined control sequence. l.1329 \code {UScitiesD} gives ``straight line'' distances between 10 ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1331 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1333 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1338 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1340 \begin{Format} ! Undefined control sequence. l.1341 \code {dist} objects based on 21 and 10 objects, respectively. ! Undefined control sequence. l.1342 (You must have the \pkg {stats} package loaded to have the methods for... ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1344 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1346 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1352 \end{Source} ! Undefined control sequence. l.1353 \HeaderA {EuStockMarkets}{Daily Closing Prices of Major European Stock... ! Undefined control sequence. l.1354 \keyword {datasets}{EuStockMarkets} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1356 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1361 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1363 \begin{Usage} [425] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1367 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1369 \begin{Format} ! Undefined control sequence. l.1371 The object is of class \code {"mts"}. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1372 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1374 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1376 \end{Source} ! Undefined control sequence. l.1377 \HeaderA {faithful}{Old Faithful Geyser Data}{faithful} ! Undefined control sequence. l.1378 \keyword {datasets}{faithful} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1380 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1383 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1385 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1389 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1391 \begin{Format} ! Undefined control sequence. l.1394 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.1395 [,1] & eruptions & numeric & Eruption time in mins \\{} ! Misplaced alignment tab character &. l.1395 [,1] & eruptions & numeric & Eruption time in mins \\{} ! Misplaced alignment tab character &. l.1395 [,1] & eruptions & numeric & Eruption time in mins \\{} ! Misplaced alignment tab character &. l.1396 [,2] & waiting & numeric & Waiting time to next ! Misplaced alignment tab character &. l.1396 [,2] & waiting & numeric & Waiting time to next ! Misplaced alignment tab character &. l.1396 [,2] & waiting & numeric & Waiting time to next ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1399 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1401 \begin{Details} \relax ! Undefined control sequence. l.1402 A closer look at \code {faithful\$eruptions} reveals that these are ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1409 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1411 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1413 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1415 \begin{References} \relax ! Undefined control sequence. l.1422 \emph{Applied Statistics} \bold {39}, 357--365. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1423 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1425 \begin{SeeAlso} \relax ! Undefined control sequence. l.1426 \code {geyser} in package \Rhref{https://CRAN.R-project.org/package=MA... ! Undefined control sequence. l.1426 \code{geyser} in package \Rhref {https://CRAN.R-project.org/package=MA... ! Undefined control sequence. l.1426 ...://CRAN.R-project.org/package=MASS}{\pkg {MASS}} for the Azzalini--... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1427 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1429 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1430 \begin{ExampleCode} ! You can't use `macro parameter character #' in math mode. l.1435 all.equal(e60, ne60) # [-3) relative diff. ~ 1/10000 ! You can't use `macro parameter character #' in math mode. l.1436 table(zapsmall(abs(e60 - ne60))) # 0, 0.02 or 0.04 ! You can't use `macro parameter character #' in horizontal mode. l.1439 te[te >= 4] # (too) many multiples of 5 ! Overfull \hbox (143.23816pt too wide) in paragraph at lines 1434--1441 []\OT1/cmr/m/n/10 ne60 <- round(e60 <- 60 * faithful$\OML/cmm/m/it/10 eruptions \OT1/cmr/m/n/10 )\OML/cmm/m/it/10 all:equal\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 e\ OT1/cmr/m/n/10 60\OML/cmm/m/it/10 ; ne\OT1/cmr/m/n/10 60)\OML/cmm/m/it/10 relat ivediff: []\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 =\OT1/cmr/m/n/10 10000\OML/cmm/m/i t/10 table\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 zapsmall\OT1/cmr/m/n/10 (\OML/cmm/m /it/10 abs\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 e\OT1/cmr/m/n/10 60 \OMS/cmsy/m/n/1 0 ^^@ ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1447 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1448 \end{Examples} ! Undefined control sequence. l.1449 \HeaderA {Formaldehyde}{Determination of Formaldehyde}{Formaldehyde} ! Undefined control sequence. l.1450 \keyword {datasets}{Formaldehyde} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1452 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1457 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1459 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 1442--1460 []\OT1/cmr/m/n/10 plot(faithful[, -3], main = f.tit, xlab = "Erup-tion time Underfull \hbox (badness 10000) in paragraph at lines 1442--1460 \OT1/cmr/m/n/10 (min)", ylab = "Wait-ing time to next erup-tion (min)") ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1463 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1465 \begin{Format} ! Undefined control sequence. l.1468 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.1469 [,1] & carb& numeric & Carbohydrate (ml) \\{} ! Misplaced alignment tab character &. l.1469 [,1] & carb& numeric & Carbohydrate (ml) \\{} ! Misplaced alignment tab character &. l.1469 [,1] & carb& numeric & Carbohydrate (ml) \\{} ! Misplaced alignment tab character &. l.1470 [,2] & optden & numeric & Optical Density ! Misplaced alignment tab character &. l.1470 [,2] & optden & numeric & Optical Density ! Misplaced alignment tab character &. l.1470 [,2] & optden & numeric & Optical Density ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1472 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1474 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1478 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1480 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1483 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1485 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1486 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1496 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1497 \end{Examples} ! Undefined control sequence. l.1498 \HeaderA {freeny}{Freeny's Revenue Data}{freeny} ! Undefined control sequence. l.1499 \methaliasA {freeny.x}{freeny}{freeny.x} ! Undefined control sequence. l.1500 \methaliasA {freeny.y}{freeny}{freeny.y} ! Undefined control sequence. l.1501 \keyword {datasets}{freeny} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1503 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1505 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1507 \begin{Usage} [426 (Concept index) [178]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1513 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1515 \begin{Format} ! Undefined control sequence. l.1518 \code {freeny.y} is a time series with 39 observations on quarterly ! Undefined control sequence. l.1521 \code {freeny.x} is a matrix of explanatory variables. The columns ! Undefined control sequence. l.1522 are \code {freeny.y} lagged 1 quarter, price index, income level, and ! Undefined control sequence. l.1525 Finally, \code {freeny} is a data frame with variables \code{y}, ! Undefined control sequence. l.1525 ...ny} is a data frame with variables \code {y}, ! Undefined control sequence. l.1526 \code {lag.quarterly.revenue}, \code{price.index}, \code{income.level}, ! Undefined control sequence. l.1526 \code{lag.quarterly.revenue}, \code {price.index}, \code{income.level}, ! Undefined control sequence. l.1526 ...erly.revenue}, \code{price.index}, \code {income.level}, ! Undefined control sequence. l.1527 and \code {market.potential} obtained from the above two data objects. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1528 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1530 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1534 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1536 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1540 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1542 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1543 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1547 # gives warning: freeny$y has class "ts" ! Missing $ inserted. $ l.1548 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the ) [-4LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1554 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1555 \end{Examples} ! Undefined control sequence. l.1556 \HeaderA {HairEyeColor}{Hair and Eye Color of Statistics Students}{Hai... ! Undefined control sequence. l.1557 \keyword {datasets}{HairEyeColor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1559 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1561 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1563 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1567 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1569 \begin{Format} ! Undefined control sequence. l.1574 \Tabular {rll}{ ! Misplaced alignment tab character &. l.1575 No & Name & Levels \\{} ! Misplaced alignment tab character &. l.1575 No & Name & Levels \\{} ! Misplaced alignment tab character &. l.1576 1 & Hair & Black, Brown, Red, Blond \\{} ! Misplaced alignment tab character &. l.1576 1 & Hair & Black, Brown, Red, Blond \\{} ! Misplaced alignment tab character &. l.1577 2 & Eye & Brown, Blue, Hazel, Green \\{} ! Misplaced alignment tab character &. l.1577 2 & Eye & Brown, Blue, Hazel, Green \\{} ! Misplaced alignment tab character &. l.1578 3 & Sex & Male, Female ! Misplaced alignment tab character &. l.1578 3 & Sex & Male, Female ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1580 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1582 \begin{Details} \relax ! Undefined control sequence. l.1583 The Hair \eqn {\times}{} Eye table comes rom a survey of students at ! Missing $ inserted. $ l.1583 The Hair \eqn{\times }{} Eye table comes rom a survey of students at ! Extra }, or forgotten $. l.1583 The Hair \eqn{\times} {} Eye table comes rom a survey of students at ! Undefined control sequence. l.1585 \code ] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toc) {Sex} was added by Friendly (1992a) for didactic purposes. ! Missing $ inserted. $ l.1586 Overfull \hbox (475.2041pt too wide) in paragraph at lines 1574--1586 \OT1/cmr/m/n/10 3 Sex Male, Fe-male The Hair $\OMS/cmsy/m/n/10 ^^B[]\OML/cm m/m/it/10 EyetablecomesromasurveyofstudentsattheUniversityofDelawarereportedbyS nee\OT1/cmr/m/n/10 (1974)\OML/cmm/m/it/10 :Thesplitby[]wasaddedbyFriendly\OT1/c mr/m/n/10 (1992\OML/cmm/m/it/10 a\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 fordidacticp urposes:$ ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1591 \end{Details} ! Missing } inserted. } l.1591 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1593 \begin{Source} \relax ! Undefined control sequence. l.1594 \url {http://euclid.psych.yorku.ca/ftp/sas/vcd/catdata/haireye.sas} Underfull \hbox (badness 2884) in paragraph at lines 1587--1595 []\OT1/cmr/m/n/10 This data set is use-ful for il-lus-trat-ing var-i-ous tech-n iques for the Underfull \hbox (badness 10000) in paragraph at lines 1587--1595 \OT1/cmr/m/n/10 anal-y-sis of con-tin-gency ta-bles, such as the stan-dard chi- squared Underfull \hbox (badness 6978) in paragraph at lines 1587--1595 \OT1/cmr/m/n/10 test or, more gen-er-ally, log-linear mod-elling, and graph-i-c al meth- Underfull \hbox (badness 10000) in paragraph at lines 1587--1595 \OT1/cmr/m/n/10 ods such as mo-saic plots, sieve di-a-grams or as-so-ci-a-tion plots. ! Undefined control sequence. l.1596 ... the two-way table aggregated over \code {Sex}. The ! Undefined control sequence. l.1597 \code {Sex} split of the `Brown hair, Brown eye' cell was ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1599 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1601 \begin{References} \relax ! Undefined control sequence. l.1604 \emph{The American Statistician}, \bold {28}, 9--12. ! Undefined control sequence. l.1608 ...rnational Conference Proceedings}, \bold {17}, ! Undefined control sequence. l.1610 \url {http://www.math.yorku.ca/SCS/sugi/sugi17-paper.html} Underfull \hbox (badness 10000) in paragraph at lines 1606--1611 []\OT1/cmr/m/n/10 Friendly, M. (1992a) Graph-i-cal meth-ods for cat-e-gor-i-cal data. Underfull \hbox (badness 5832) in paragraph at lines 1606--1611 \OT1/cmr/m/it/10 SAS User Group In-ter-na-tional Con-fer-ence Pro-ceed-ings\OT1 /cmr/m/n/10 , 17, 190--200. ! Undefined control sequence. l.1616 \url {http://www.math.yorku.ca/SCS/Papers/asa92.html} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1621 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.toc l.1623 \begin{SeeAlso} \relax ! Undefined control sequence. l.1624 \code {\LinkA{chisq.test}{chisq.test}}, ! Undefined control sequence. l.1624 \code{\LinkA {chisq.test}{chisq.test}}, ! Undefined control sequence. l.1625 \code {\LinkA{loglin}{loglin}}, ! Undefined control sequence. l.1625 \code{\LinkA {loglin}{loglin}}, ! Undefined control sequence. l.1626 \code {\LinkA{mosaicplot}{mosaicplot}} ! Undefined control sequence. l.1626 \code{\LinkA {mosaicplot}{mosaicplot}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1627 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1629 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1630 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1632 # # Full mosaic ! You can't use `macro parameter character #' in horizontal mode. l.1632 ## Full mosaic ! You can't use `macro parameter character #' in horizontal mode. l.1634 # # Aggregate over sex (as in Snee's original data) ! You can't use `macro parameter character #' in horizontal mode. l.1634 ## Aggregate over sex (as in Snee's original data) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1638 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1639 \end{Examples} ! Undefined control sequence. l.1640 \HeaderA {Harman23.cor}{Harman Example 2.3}{Harman23.cor} ! Undefined control sequence. l.1641 \keyword {datasets}{Harman23.cor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1643 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1646 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1648 \begin{Usage} [427] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.cps] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1652 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1654 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1658 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1660 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1661 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1665 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1666 \end{Examples} ! Undefined control sequence. l.1667 \HeaderA {Harman74.cor}{Harman Example 7.4}{Harman74.cor} ! Undefined control sequence. l.1668 \keyword {datasets}{Harman74.cor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1670 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1673 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1675 \begin{Usage} Underfull \hbox (badness 1292) in paragraph at lines 1655--1676 \OT1/cmr/m/n/10 Uni-ver-sity of Chicago Press, Ta-ble 2.3. re-quire(stats) ( Har- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1679 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1681 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1685 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1687 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1688 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1695 \end{ExampleCode} ! Missing $ inserted. $ l.1695 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1696 \end{Examples} ! Undefined control sequence. l.1697 \HeaderA {Indometh}{Pharmacokinetics of Indomethacin}{Indometh} ! Undefined control sequence. l.1698 \keyword {datasets}{Indometh} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1700 \begin{Description} \relax ! Undefined control sequence. l.1701 The \code {Indometh} data frame has 66 rows and 3 columns of data on ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1704 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1706 \begin{Usage} Underfull \hbox (badness 1292) in paragraph at lines 1682--1707 \OT1/cmr/m/n/10 Uni-ver-sity of Chicago Press, Ta-ble 7.4. re-quire(stats) ( Har- Underfull \hbox (badness 1082) in paragraph at lines 1682--1707 \OT1/cmr/m/n/10 man74.FA <- fac-tanal(factors = 1, cov-mat = Har-man74.cor)) fo r(factors Underfull \hbox (badness 2111) in paragraph at lines 1682--1707 \OT1/cmr/m/n/10 in 2:5) print(update(Harman74.FA, fac-tors = fac-tors)) Har-man 74.FA <- Underfull \hbox (badness 2503) in paragraph at lines 1682--1707 \OT1/cmr/m/n/10 fac-tanal(factors = 5, cov-mat = Har-man74.cor, ro-ta-tion = "p ro-max") ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1710 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1712 \begin{Format} ! Undefined control sequence. l.1714 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1731 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1733 \begin{Details} \relax ! Undefined control sequence. l.1737 ...set was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.1738 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.1738 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.1738 ...or \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.1739 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1740 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1742 \begin{Source} \relax ! Undefined control sequence. l.1746 ...macokinetics and Biopharmaceutics} \bold {4}, ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1755 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1757 \begin{SeeAlso} \relax ! Undefined control sequence. l.1758 \code {\LinkA{SSbiexp}{SSbiexp}} for models fitted to this dataset. ! Undefined control sequence. l.1758 \code{\LinkA {SSbiexp}{SSbiexp}} for models fitted to this dataset. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1759 \end{SeeAlso} ! Undefined control sequence. l.1760 \HeaderA {infert}{Infertility after Spontaneous and Induced Abortion}{... ! Undefined control sequence. l.1761 \keyword {datasets}{infert} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1763 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1766 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1768 \begin{Usage} Chapter 1 [1 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1772 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1774 \begin{Format} ! Undefined control sequence. l.1776 \Tabular {rll}{ ! Misplaced alignment tab character &. l.1777 1. & Education & 0 = 0-5 years \\{} ! Misplaced alignment tab character &. l.1777 1. & Education & 0 = 0-5 years \\{} ! Misplaced alignment tab character &. l.1778 & & 1 = 6-11 years \\{} ! Misplaced alignment tab character &. l.1778 & & 1 = 6-11 years \\{} ! Misplaced alignment tab character &. l.1779 & & 2 = 12+ years \\{} ! Misplaced alignment tab character &. l.1779 & & 2 = 12+ years \\{} ! Misplaced alignment tab character &. l.1780 2. & age & age in years of case \\{} ! Misplaced alignment tab character &. l.1780 2. & age & age in years of case \\{} ! Misplaced alignment tab character &. l.1781 3. & parity & count \\{} ! Misplaced alignment tab character &. l.1781 3. & parity & count \\{} ! Misplaced alignment tab character &. l.1782 4. & number of prior & 0 = 0 \\{} ! Misplaced alignment tab character &. l.1782 4. & number of prior & 0 = 0 \\{} ! Misplaced alignment tab character &. l.1783 & induced abortions & 1 = 1 \\{} ! Misplaced alignment tab character &. l.1783 & induced abortions & 1 = 1 \\{} ! Misplaced alignment tab character &. l.1784 & & 2 = 2 or more \\{} ! Misplaced alignment tab character &. l.1784 & & 2 = 2 or more \\{} ! Misplaced alignment tab character &. l.1785 5. & case status& 1 = case \\{} ! Misplaced alignment tab character &. l.1785 5. & case status& 1 = case \\{} ! Misplaced alignment tab character &. l.1786 & & 0 = control \\{} ! Misplaced alignment tab character &. l.1786 & & 0 = control \\{} ! Misplaced alignment tab character &. l.1787 6. & number of prior & 0 = 0 \\{} ! Misplaced alignment tab character &. l.1787 6. & number of prior & 0 = 0 \\{} ! Misplaced alignment tab character &. l.1788 & spontaneous abortions & 1 = 1 \\{} ! Misplaced alignment tab character &. l.1788 & spontaneous abortions & 1 = 1 \\{} ! Misplaced alignment tab character &. l.1789 & & 2 = 2 or more \\{} ! Misplaced alignment tab character &. l.1789 & & 2 = 2 or more \\{} ! Misplaced alignment tab character &. l.1790 7. & matched set number & 1-83 \\{} ! Misplaced alignment tab character &. l.1790 7. & matched set number & 1-83 \\{} ! Misplaced alignment tab character &. l.1791 8. & stratum number & 1-63} ! Misplaced alignment tab character &. l.1791 8. & stratum number & 1-63} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1792 \end{Format} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate hel]p. ... l.1794 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1797 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1799 \begin{Source} \relax ! Undefined control sequence. l.1801 \emph{Br. J. of Obst. and Gynaec.} \bold {83}, 645--650. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1802 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1804 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1805 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1809 # # adjusted for other potential confounders: ! You can't use `macro parameter character #' in horizontal mode. l.1809 ## adjusted for other potential confounders: ! You can't use `macro parameter character #' in horizontal mode. l.1812 # # Really should be analysed by conditional logistic regression ! You can't use `macro parameter character #' in horizontal mode. l.1812 ## Really should be analysed by conditional logistic regression ! You can't use `macro parameter character #' in horizontal mode. l.1813 # # which is in the survival package ! You can't use `macro parameter character #' in horizontal mode. l.1813 ## which is in the survival package ! You can't use `macro parameter character #' in horizontal mode. l.1817 detach() # survival (conflicts) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1819 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1820 \end{Examples} ! Undefined control sequence. l.1821 \HeaderA {InsectSprays}{Effectiveness of Insect Sprays}{InsectSprays} ! Undefined control sequence. l.1822 \keyword {datasets}{InsectSprays} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1824 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1827 \end{Description} [179 ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1829 \begin{Usage} [428] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1833 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1835 \begin{Format} ! Undefined control sequence. l.1838 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.1839 [,1] & count & numeric & Insect count\\{} ! Misplaced alignment tab character &. l.1839 [,1] & count & numeric & Insect count\\{} ! Misplaced alignment tab character &. l.1839 [,1] & count & numeric & Insect count\\{} ! Misplaced alignment tab character &. l.1840 [,2] & spray & factor & The type of spray ! Misplaced alignment tab character &. l.1840 [,2] & spray & factor & The type of spray ! Misplaced alignment tab character &. l.1840 [,2] & spray & factor & The type of spray ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1842 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1844 \begin{Source} \relax ! Undefined control sequence. l.1847 \emph{Biometrika}, \bold {29}, 243--262. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1848 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1850 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1853 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1855 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1856 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1869 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [2] l.1870 \end{Examples} ! Undefined control sequence. l.1871 \HeaderA {iris}{Edgar Anderson's Iris Data}{iris} ! Undefined control sequence. l.1872 \aliasA {iris3}{iris}{iris3} ! Undefined control sequence. l.1873 \keyword {datasets}{iris} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1875 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1881 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1883 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1888 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1890 \begin{Format} ! Undefined control sequence. l.1891 \code {iris} is a data frame with 150 cases (rows) and 5 variables ! Undefined control sequence. l.1892 (columns) named \code {Sepal.Length}, \code{Sepal.Width}, ! Undefined control sequence. l.1892 (columns) named \code{Sepal.Length}, \code {Sepal.Width}, ! Undefined control sequence. l.1893 \code {Petal.Length}, \code{Petal.Width}, and \code{Species}. ! Undefined control sequence. l.1893 \code{Petal.Length}, \code {Petal.Width}, and \code{Species}. ! Undefined control sequence. l.1893 ...l.Length}, \code{Petal.Width}, and \code {Species}. ! Undefined control sequence. l.1895 \code {iris3} gives the same data arranged as a 3-dimensional array ! Undefined control sequence. l.1898 measurements with names \code {Sepal L.}, \code{Sepal W.}, ! Undefined control sequence. l.1898 ...ements with names \code{Sepal L.}, \code {Sepal W.}, ! Undefined control sequence. l.1899 \code {Petal L.}, and \code{Petal W.}, and the third the species. ! Undefined control sequence. l.1899 \code{Petal L.}, and \code {Petal W.}, and the third the species. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1900 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1902 \begin{Source} \relax ! Undefined control sequence. l.1906 \bold {7}, Part II, 179--188. [429])] [180 ! Undefined control sequence. l.1912 \bold {59}, 2--5. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1913 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1915 \begin{References} \relax ! Undefined control sequence. l.1918 Wadsworth \& Brooks/Cole. (has \code {iris3} as \code{iris}.) ! Undefined control sequence. l.1918 ... Brooks/Cole. (has \code{iris3} as \code {iris}.) ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1919 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1921 \begin{SeeAlso} \relax ! Undefined control sequence. l.1922 \code {\LinkA{matplot}{matplot}} some examples of which use ! Undefined control sequence. l.1922 \code{\LinkA {matplot}{matplot}} some examples of which use ! Undefined control sequence. l.1923 \code {iris}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1924 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1926 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1927 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1933 all.equal(ii, iris) # TRUE ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1934 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1935 \end{Examples} ! Undefined control sequence. l.1936 \HeaderA {islands}{Areas of the World's Major Landmasses}{islands} ! Undefined control sequence. l.1937 \keyword {datasets}{islands} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1939 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanat] [3ion. Type H for immediate help. ... l.1942 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1944 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1948 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1950 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1952 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1954 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1956 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1958 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1962 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1964 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1965 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1971 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1972 \end{Examples} ! Undefined control sequence. l.1973 \HeaderA {JohnsonJohnson}{Quarterly Earnings per Johnson \& Johnson Sh... ! Undefined control sequence. l.1974 \keyword {datasets}{JohnsonJohnson} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1976 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1978 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1980 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1984 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1986 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1988 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1990 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1994 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1996 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1997 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2002 # # This example gives a possible-non-convergence warning on some ! You can't use `macro parameter character #' in horizontal mode. l.2002 ## This example gives a possible-non-convergence warning on some ! You can't use `macro parameter character #' in horizontal mode. l.2003 # # platforms, but does seem to converge on x86 Linux and Windows. ! You can't use `macro parameter character #' in horizontal mode. l.2003 ## platforms, but does seem to converge on x86 Linux and Windows. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2012 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2013 \end{Examples} ! Undefined control sequence. l.2014 \HeaderA ]> {LakeHuron}{Level of Lake Huron 1875--1972}{LakeHuron} ! Undefined control sequence. l.2015 \keyword {datasets}{LakeHuron} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2017 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2019 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2021 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2025 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2027 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2029 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2031 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2040 \end{Source} ! Undefined control sequence. l.2041 \HeaderA {lh}{Luteinizing Hormone in Blood Samples}{lh} ! Undefined control sequence. l.2042 \keyword {datasets}{lh} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2044 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2047 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2049 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2053 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... for immediate help. ... l.2059 \end{Source} ! Undefined control sequence. l.2060 \HeaderA {LifeCycleSavings}{Intercountry Life-Cycle Savings Data}{Life... ! Undefined control sequence. l.2061 \keyword {datasets}{LifeCycleSavings} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2063 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2065 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2067 \begin{Usage} [430>] [4 for immediate help. ... l.2071 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2073 \begin{Format} ! Undefined control sequence. l.2076 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.2077 [,1] & sr & numeric & aggregate personal savings \\{} ! Misplaced alignment tab character &. l.2077 [,1] & sr & numeric & aggregate personal savings \\{} ! Misplaced alignment tab character &. l.2077 [,1] & sr & numeric & aggregate personal savings \\{} ! Misplaced alignment tab character &. l.2078 [,2] & pop15 & numeric & \% of population under 15 \\{} ! Misplaced alignment tab character &. l.2078 [,2] & pop15 & numeric & \% of population under 15 \\{} ! Misplaced alignment tab character &. l.2078 [,2] & pop15 & numeric & \% of population under 15 \\{} ! Misplaced alignment tab character &. l.2079 [,3] & pop75 & numeric & \% of population over 75 \\{} ! Misplaced alignment tab character &. l.2079 [,3] & pop75 & numeric & \% of population over 75 \\{} ! Misplaced alignment tab character &. l.2079 [,3] & pop75 & numeric & \% of population over 75 \\{} ! Misplaced alignment tab character &. l.2080 [,4] & dpi & numeric & real per-capita disposable ! Misplaced alignment tab character &. l.2080 [,4] & dpi & numeric & real per-capita disposable ! Misplaced alignment tab character &. l.2080 [,4] & dpi & numeric & real per-capita disposable ! Misplaced alignment tab character &. l.2082 [,5] & ddpi & numeric & \% growth rate of dpi ! Misplaced alignment tab character &. l.2082 [,5] & ddpi & numeric & \% growth rate of dpi ! Misplaced alignment tab character &. l.2082 [,5] & ddpi & numeric & \% growth rate of dpi ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2084 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2086 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2095 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2097 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2100 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion>] for immediate help. ... l.2102 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2109 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2111 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2112 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2118 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2119 \end{Examples} ! Undefined control sequence. l.2120 \HeaderA {Loblolly}{Growth of Loblolly pine trees}{Loblolly} ! Undefined control sequence. l.2121 \keyword {datasets}{Loblolly} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2123 \begin{Description} \relax ! Undefined control sequence. l.2124 The \code {Loblolly} data frame has 84 rows and 3 columns of records of ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2126 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2128 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2132 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2134 \begin{Format} ! Undefined control sequence. l.2136 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2153 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... > for immediate help. ... l.2159 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2161 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2169 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2171 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2172 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2182 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2183 \end{Examples} ! Undefined control sequence. l.2184 \HeaderA {longley}{Longley's Economic Regression Data}{longley} ! Undefined control sequence. l.2185 \keyword {datasets}{longley} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2187 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2190 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2192 \begin{Usage} [431> [5 for immediate help. ... l.2196 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2198 \begin{Format} ! Undefined control sequence. l.2200 1962 (\eqn {n=16}{}). ! Undefined control sequence. \code {GNP.deflator} l.2203 \item[\code{GNP.deflator}] GNP implicit price deflator (\eqn{1954=100... ! Undefined control sequence. l.2203 ...ator}] GNP implicit price deflator (\eqn {1954=100}{}) ! Undefined control sequence. \code {GNP} l.2204 \item[\code{GNP}] Gross National Product. ! Undefined control sequence. \code {Unemployed} l.2205 \item[\code{Unemployed}] number of unemployed. ! Undefined control sequence. \code {Armed.Forces} l.2206 \item[\code{Armed.Forces}] number of people in the armed forces. ! Undefined control sequence. \code {Population} l.2207 \item[\code{Population}] `noninstitutionalized' population ! Undefined control sequence. l.2208 \eqn {\ge}{} 14 years of age. ! Missing $ inserted. $ l.2208 \eqn{\ge }{} 14 years of age. ! Extra }, or forgotten $. l.2208 \eqn{\ge} {} 14 years of age. ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2209 \item [\code{Year}] the year (time). ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2209 \item[\code{Year}] the year (time). ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2209 \item[\code{Year}] the year (time). ! Undefined control sequence. \code {Year} l.2209 \item[\code{Year}] the year (time). ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2210 \item [\code{Employed}] number of people employed. ! Missing $ inserted. $ l.2210 \item[\code{Employed}] number of people employed. ! Missing } inserted. } l.2210 \item[\code{Employed}] number of people employed. ! Undefined control sequence. \code {Employed} l.2210 \item[\code{Employed}] number of people employed. ! Undefined control sequence. l.2215 The regression \code {lm(Employed \textasciitilde{} .)} is known to be... ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help.]> ... l.2217 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2219 \begin{Source} \relax ! Undefined control sequence. l.2223 ... American Statistical Association} \bold {62}, ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2225 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2227 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2231 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2233 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2234 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2236 # # give the data set in the form it is used in S-PLUS: ! You can't use `macro parameter character #' in horizontal mode. l.2236 ## give the data set in the form it is used in S-PLUS: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2245 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2246 \end{Examples} ! Undefined control sequence. l.2247 \HeaderA {lynx}{Annual Canadian Lynx trappings 1821--1934}{lynx} ! Undefined control sequence. l.2248 \keyword {datasets}{lynx} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2250 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2254 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2256 \begin{Usage} ! LaTeX Error: \begin{document} ende Chapter 2 [6 for immediate help. ... l.2260 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2262 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2266 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2268 \begin{References} \relax ! Undefined control sequence. l.2278 \bold {140}, 411--431. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2279 \end{References} ! Undefined control sequence. l.2280 \HeaderA {morley}{Michelson Speed of Light Data}{morley} ! Undefined control sequence. l.2281 \keyword {datasets}{morley} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2283 \begin{Description} \relax ! Undefined control sequence. l.2288 (km/sec, with \code {299000} subtracted). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2289 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2291 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2295 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2297 \begin{Format} ! Undefined control sequence. \code {Expt} l.2301 \item[\code{Expt}] The experiment number, from 1 to 5. ! Undefined control sequence. \code {Run} l.2302 \item[\code{Run}] The run number within each experiment. ! Undefined control sequence. \code {Speed} l.2303 \item[\code{Speed}] Speed-of-light measurement. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2307 \end{Format} ! LaTeX Error: Environme> for immediate help. ... l.2309 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2315 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2317 \begin{Note} \relax ! Undefined control sequence. l.2318 This is the same dataset as \code {michelson} in package ! Undefined control sequence. l.2319 \Rhref {https://CRAN.R-project.org/package=MASS}{\pkg{MASS}}. ! Undefined control sequence. l.2319 ...://CRAN.R-project.org/package=MASS}{\pkg {MASS}}. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2320 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2322 \begin{Source} \relax [432> ! Undefined control sequence. l.2329 \emph{Annals of Statistics} \bold {5}, 1055--1098. (See Table 6.) ! Undefined control sequence. l.2334 \emph{Astronomic Papers} \bold {1} 135--8. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2336 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2338 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2339 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2343 xtabs(~ Expt + Run, data = michelson) # 5 x 20 balanced (two-way) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2350 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2351 \end{Examples} ! Undefined control sequence. l.2352 \HeaderA {mtcars}{Motor Trend Car Road Tests}{mtcars} ! Undefined control sequence. l.2353 \keyword {datasets}{mtcars} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2355 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2360 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2362 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2366 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2368 \begin{Format} ! Undefined control sequence. l.2371 \Tabular {rll}{ ! Misplaced alignment tab character &. l.2372 [, 1] & mpg & Miles/(US) gallon \\{} ! Misplaced alignment tab character &. l.2372 [, 1] & mpg & Miles/(US) gallon \\{} ! Misplaced alignment tab character &. l.2373 [, 2] & cyl & Number of cylinders \\{} ! Misplaced alignment tab character &. l.2373 [, 2] & cyl & Number of cylinders \\ for immediate help. ... l.2384 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2386 \begin{Source} \relax ! Undefined control sequence. l.2389 \emph{Biometrics}, \bold {37}, 391--411. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2390 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2392 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2393 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2398 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2399 \end{Examples} ! Undefined control sequence. [7> l.2400 \HeaderA {nhtemp}{Average Yearly Temperatures in New Haven}{nhtemp} ! Undefined control sequence. l.2401 \keyword {datasets}{nhtemp} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2403 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2406 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2408 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2412 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2414 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2416 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2418 \begin{Source} \relax ! Undefined control sequence. l.2420 \emph{Cycles}, \bold {1972}, 117--121. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2421 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2423 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2427 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2429 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2430 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... for immediate help. ... l.2435 \end{Examples} ! Undefined control sequence. l.2436 \HeaderA {Nile}{Flow of the River Nile}{Nile} ! Undefined control sequence. l.2437 \keyword {datasets}{Nile} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2439 \begin{Description} \relax ! Undefined control sequence. l.2441 \code {Assuan}), 1871--1970, in \eqn{10^8 m^3}{}, ! Undefined control sequence. l.2441 \code{Assuan}), 1871--1970, in \eqn {10^8 m^3}{}, ! Missing $ inserted. $ l.2441 \code{Assuan}), 1871--1970, in \eqn{10^ 8 m^3}{}, ! Extra }, or forgotten $. l.2441 ...{Assuan}), 1871--1970, in \eqn{10^8 m^3} {}, ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2443 \end{Description} ! Missing $ inserted. $ l.2443 \end{Description} ! Missing } inserted. } l.2443 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2445 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2449 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2451 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2453 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2455 \begin{Source} \relax ! Undefined control sequence. l.2458 \url {http://www.ssfpack.com/DKbook.html} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2459 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2461 \begin{References} \relax ! Undefined control sequence. l.2463 ... Business and Economic Statistics} \bold {11}, 81--92. [433]> for immediate help. ... l.2467 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2469 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2470 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2476 ar(Nile) # selects order 2 ! Missing $ inserted. $ l.2480 ! You can't use `macro parameter character #' in vertical mode. l.2481 # # Now consider missing values, following Durbin & Koopman ! You can't use `macro parameter character #' in vertical mode. l.2481 ## Now consider missing values, following Durbin & Koopman ! Misplaced alignment tab character &. l.2481 ...sider missing values, following Durbin & Koopman Underfull \hbox (badness 10000) in paragraph at lines 2481--2496 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 predict\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 a rima\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 window\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 N ileNA; \OT1/cmr/m/n/10 1871\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 1930)\OML/cmm/m/i t/10 ; c\OT1/cmr/m/n/10 (2\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 0\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 0))\OML/cmm/m/it/10 ; n:ahead \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.2497 # # Structural time series models ! You can't use `macro parameter character #' in vertical mode. l.2497 ## Structural time series models ! You can't use `macro parameter character #' in horizontal mode. l.2500 # # local level model ! You can't use `macro parameter character #' in horizontal mode. l.2500 ## local level model ! You can't use `macro parameter character #' in horizontal mode. l.2502 lines(fitted(fit), lty = 2) # contemporaneous smoothing ! You can't use `macro parameter character #' in horizontal mode. l.2503 lines(tsSmooth(fit), lty = 2, col = 4) # fixed-interval smoothing ! You can't use `macro parameter character #' in horizontal mode. l.2505 # # local trend model ! You can't use `macro parameter character #' in horizontal mode. l.2505 ## local trend model ! You can't use `macro parameter character #' in horizontal mode. l.2506 (fit2 <- StructTS(Nile, type = "trend")) # # constant trend fitted ! You can't use `macro parameter character #' in horizontal mode. l.2506 (fit2 <- StructTS(Nile, type = "trend")) ## constant trend fitted ! You can't use `macro parameter character #' in horizontal mode. l.2508 # # with 50% confidence interval ! You can't use `macro parameter character #' in horizontal mode. l.2508 ## with 50% confidence interval ! Missing $ inserted. $ l.2511 ! You can't use `macro parameter character #' in vertical mode. l.2512 # # Now consider missing values ! You can't use `macro parameter character #' in vertical mode. l.2512 ## Now consider missing values ! LaTeX Error: \begin{document} ended by \end{> for immediate help. ... l.2518 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2519 \end{Examples} ! Undefined control sequence. l.2520 \HeaderA {nottem}{Average Monthly Temperatures at Nottingham, 1920--19... ! Undefined control sequence. l.2521 \keyword {datasets}{nottem} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2523 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2526 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2528 \begin{Usage} Underfull \hbox (badness 1997) in paragraph at lines 2512--2529 []\OT1/cmr/m/n/10 Now con-sider miss-ing val-ues plot(NileNA) (fit3 <- StructTS (NileNA, ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2532 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2534 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2538 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2540 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2541 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2548 \end{ExampleCode} ! Missing $ inserted. $ l.2548 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2549 \end{Examples} ! Undefined control sequence. l.2550 \HeaderA {npk}{Classical N> for immediate help. ... l.2553 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2558 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2560 \begin{Usage} Underfull \hbox (badness 2057) in paragraph at lines 2535--2561 \OT1/cmr/m/n/10 nott <- win-dow(nottem, end = c(1936,12)) fit <- arima(nott, or -der = ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2564 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2566 \begin{Format} ! Undefined control sequence. l.2567 The \code {npk} data frame has 24 rows and 5 columns: ! Undefined control sequence. \code {block} l.2570 \item[\code{block}] ! Undefined control sequence. \code {N} l.2573 \item[\code{N}] ! Undefined control sequence. \code {P} l.2576 \item[\code{P}] ! Undefined control sequence. \code {K} l.2579 \item[\code{K}] ! Undefined control sequence. \code {yield} l.2582 \item[\code{yield}] [434]> for immediate help. ... l.2588 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2590 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2592 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2594 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2597 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2599 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2600 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2612 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2613 \end{Examples} ! Undefined control sequence. l.2614 \HeaderA {occupationalStatus}{Occupational Status of Fathers and their... ! Undefined control sequence. l.2615 \keyword {datasets}{occupationalStatus} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2617 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2620 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2622 \begin{Usage} Underfull \hbox (badness 6188) in paragraph at lines 2602--2623 \OT1/cmr/m/n/10 block + N*P*K, npk) npk.aov sum-mary(npk.aov) coef(npk.aov) op- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2626 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2628 \begin{Format} ! Undefined control sequence. l.2629 A \code {\LinkA{table}{table}} of counts, with classifying factors ! Undefined control sequence. l.2629 A \code{\LinkA {table}{table}} of counts, with classifying factors ! Undefined control sequence. l.2630 \code {origin} (father's occupational status; levels \code{1:8}) ! Undefined control sequence. l.2630 ...ther's occupational status; levels \code {1:8}) ! Undefined control sequence. l.2631 and \code {destination} (son's occupational status; levels \code{1:8}). ! Undefined control sequence. l.2631 ...(son's occupational status; levels \code {1:8}). ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2632 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2634 \begin{Source} \relax ! Undefined control sequence. l.2638 \emph{J. Am. Stat. Assoc.}, \bold {74} (367), 537--552. ! Undefined control sequence. l.2640 The data set has been in package \Rhref {https://CRAN.R-project.org/pa... ! Undefined control sequence. l.2640 ...s://CRAN.R-project.org/package=gnm}{\pkg {gnm}} and been provided b... ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2642 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2644 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2645 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 2640--2647 []\OT1/cmr/m/n/10 The data set has been in pack-age https://CRAN.R- ! You can't use `macro parameter character #' in vertical mode. l.2650 # # Fit a uniform association model separating diagonal effects ! You can't use `macro parameter character #' in vertical mode. l.2650 ## Fit a uniform association model separating diagonal effects Underfull \hbox (badness 1661) in paragraph at lines 2650--2656 []\OT1/cmr/m/n/10 Fit a uni-form as-so-ci-a-tion model sep-a-rat-ing di-ag-o-na l ef-fects Diag <- ! You can't use `macro parameter character #' in horizontal mode. l.2658 plot(modUnif) # 4 plots, with warning about h_ii ~= 1 ! Missing $ inserted. $ l.2658 ...dUnif) # 4 plots, with warning about h_ ii ~= 1 ! LaTeX Error: \begin{document} ended by \end{Ex> [9 for immediate help. ... l.2659 \end{ExampleCode} ! Missing $ inserted. $ l.2659 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2660 \end{Examples} ! Undefined control sequence. l.2661 \HeaderA {Orange}{Growth of Orange Trees}{Orange} ! Undefined control sequence. l.2662 \keyword {datasets}{Orange} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2664 \begin{Description} \relax ! Undefined control sequence. l.2665 The \code {Orange} data frame has 35 rows and 3 columns of records of ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2667 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2669 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2673 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2675 \begin{Format} ! Undefined control sequence. l.2677 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2696 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2698 \begin{Details} \relax ! Undefined control sequence. l.2699 ...set was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.2700 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.2700 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.2700 ...or \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.2701 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... >] l.2702 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2704 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2710 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2712 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2713 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2724 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2725 \end{Examples} ! Undefined control sequence. l.2726 \HeaderA {OrchardSprays}{Potency of Orchard Sprays}{OrchardSprays} ! Undefined control sequence. l.2727 \keyword {datasets}{OrchardSprays} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2729 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2733 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2735 \begin{Usage} [435 for immediate help. ... l.2739 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2741 \begin{Format} ! Undefined control sequence. l.2744 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.2745 [,1] & rowpos & numeric & Row of the design\\{} ! Misplaced alignment tab character &. l.2745 [,1] & rowpos & numeric & Row of the design\\{} ! Misplaced alignment tab character &. l.2745 [,1] & rowpos & numeric & Row of the design\\{} ! Misplaced alignment tab character &. l.2746 [,2] & colpos & numeric & Column of the design\\{} ! Misplaced alignment tab character &. l.2746 [,2] & colpos & numeric & Column of the design\\{} ! Misplaced alignment tab character &. l.2746 [,2] & colpos & numeric & Column of the design\\{} ! Misplaced alignment tab character &. l.2747 [,3] & treatment & factor & Treatment level\\{} ! Misplaced alignment tab character &. l.2747 [,3] & treatment & factor & Treatment level\\{} ! Misplaced alignment tab character &. l.2747 [,3] & treatment & factor & Treatment level\\{} ! Misplaced alignment tab character &. l.2748 [,4] & decrease & numeric & Response ! Misplaced alignment tab character &. l.2748 [,4] & decrease & numeric & Response ! Misplaced alignment tab character &. l.2748 [,4] & decrease & numeric & Response ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2750 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2752 \begin{Details} \relax ! Undefined control sequence. l.2763 An \eqn {8 \times 8}{} Latin square design was used and the ! Missing $ inserted. $ l.2763 An \eqn{8 \times 8}{} Latin square design was used and the ! Extra }, or forgotten $. l.2763 An \eqn{8 \times 8} {} Latin square design was used and the ! Missing $ inserted. $ l.2765 Overfull \hbox (2.85045pt too wide) in paragraph at lines 2763--2765 []\OT1/cmr/m/n/10 An 8 $\OMS/cmsy/m/n/10 ^^B\OT1/cmr/m/n/10 8[]\OML/cmm/m/it/10 Latinsquaredesignwasusedandthetreatmentswerecodedasfollows \OT1/cmr/m/n/10 :$ ! Undefined control sequence. l.2766 \Tabular {rl}{ ! Misplaced alignment tab character &. l.2767 A & highest level of lime sulphur\\{} ! Misplaced alignment tab character &. l.2768 B & next highest level of lime sulphur\\{} ! Misplaced alignment tab character &. l.2769 . & \\{} ! Misplaced alignment tab character &. l.2770 . & \\{} ! Misplaced alignment tab character &. l.2771 . & \\{} ! Misplaced alignment tab character &. l.2772 G & lowest level of lime sulphur\\{} ! Misplaced alignment tab character &. l.2773 H & no lime sulphur ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX> [10 Companion for explanation. Type H for immediate help. ... l.2775 \end{Details} ! Missing } inserted. } l.2775 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2777 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2781 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2783 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2787 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2789 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2790 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2793 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2794 \end{Examples} ! Undefined control sequence. l.2795 \HeaderA {PlantGrowth}{Results from an Experiment on Plant Growth}{Pla... ! Undefined control sequence. l.2796 \keyword {datasets}{PlantGrowth} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2798 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2802 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2804 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2808 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2810 \begin{Format} ! Undefined control sequence. l.2814 \Tabular {rll}{ ! Misplaced alignment tab character &. l.2815 [, 1] & weight & numeric \\{} ! Misplaced alignment tab character &. l.2815 [, 1] & weight & numeric \\{} ! Misplaced alignment tab character &. l.2816 [, 2] & group & factor ! Misplaced alignment tab character &. l.2816 [, 2] & group & factor ! Undefined control sequence. l.2819 The levels of \code {group} are `ctrl', `trt1', and `trt2'. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2820 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2822 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2826 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2828 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2829 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2830 # # One factor ANOVA example from Dobson's book, cf. Table 7.4: ! You can't use `macro parameter character #' in horizontal mode. l.2830 ## One factor ANOVA example from Dobson's book, cf. Table 7.4: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2836 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2837 \end{Examples} ! Undefined control sequence. l.2838 \HeaderA {precip}{Annual Precipitation in US Cities}{precip} ! Undefined control sequence. l.2839 \keyword {datasets}{precip} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2841 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2844 \end{Description} ! LaTeX Error: Environment Usag]e undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2846 \begin{Usage} [436] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2850 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2852 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2854 \end{Format} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2856 \begin{Note} \relax ! Undefined control sequence. l.2857 ...n up to Nov.16, 2016 had a typo in \code {"Cincinnati"}'s ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2859 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2861 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2863 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2865 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2869 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2871 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2872 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.2877 # # Old ("wrong") version of dataset (just name change): ! You can't use `macro parameter character #' in vertical mode. l.2877 ## Old ("wrong") version of dataset (just name change): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2883 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Typ Output written on R-exts.pdf (186 pages, 1082121 bytes). Transcript written on R-exts.log. [11e H for immediate help. ... l.2884 \end{Examples} ! Undefined control sequence. l.2885 \HeaderA {presidents}{Quarterly Approval Ratings of US Presidents}{pre... ! Undefined control sequence. l.2886 \keyword {datasets}{presidents} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2888 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2892 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2894 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2898 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2900 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2902 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2904 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2907 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2909 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2911 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2913 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2917 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immedi] Chapter 3ate help. ... l.2919 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2920 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2924 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2925 \end{Examples} ! Undefined control sequence. l.2926 \HeaderA {pressure}{Vapor Pressure of Mercury as a Function of Tempera... ! Undefined control sequence. l.2927 \keyword {datasets}{pressure} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2929 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2932 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2934 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2938 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2940 \begin{Format} ! Undefined control sequence. l.2943 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.2944 [, 1] & temperature & numeric & temperature (deg C)\\{} ! Misplaced alignment tab character &. l.2944 [, 1] & temperature & numeric & temperature (deg C)\\{} ! Misplaced alignment tab character &. l.2944 [, 1] & temperature & numeric & temperature (deg C)\\{} ! Misplaced alignment tab character &. l.2945 [, 2] & pressure & numeric & pressure (mm) ! Misplaced alignment tab character &. l.2945 [, 2] & pressure & numeric & pressure (mm) ! Misplaced alignment tab character &. l.2945 [, 2] & pressure & numeric & pressure (mm) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2947 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [12] l.2949 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2953 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2955 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2959 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2961 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2962 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2970 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2971 \end{Examples} ! Undefined control sequence. l.2972 \HeaderA {Puromycin}{Reaction Velocity of an Enzymatic Reaction}{Purom... ! Undefined control sequence. l.2973 \keyword {datasets}{Puromycin} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2975 \begin{Description} \relax ! Undefined control sequence. l.2976 The \code {Puromycin} data frame has 23 rows and 3 columns of the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2979 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2981 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2985 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2987 \begin{Format} ! Undefined control sequence. \code {conc} l.2991 \item[\code{conc}] ! Undefined control sequence. \code {rate} l.2994 \item[\code{rate}] ! Undefined control sequence. \code {state} l.2997 \item[\code{state}] ! Undefined control sequence. l.2999 \code {treated} ! Undefined control sequence. l.3000 \code {untreated} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3005 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3007 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3015 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3017 \begin{Source} \relax [437] [13 ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3025 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3027 \begin{SeeAlso} \relax ! Undefined control sequence. l.3028 \code {\LinkA{SSmicmen}{SSmicmen}} for other models fitted to this dat... ! Undefined control sequence. l.3028 \code{\LinkA {SSmicmen}{SSmicmen}} for other models fitted to this dat... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3029 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3031 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3032 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3041 # # simplest form of fitting the Michaelis-Menten model to these data ! You can't use `macro parameter character #' in horizontal mode. l.3041 ## simplest form of fitting the Michaelis-Menten model to these data ! You can't use `macro parameter character #' in horizontal mode. l.3050 # # add fitted lines to the plot ! You can't use `macro parameter character #' in horizontal mode. l.3050 ## add fitted lines to the plot ! Missing $ inserted. $ l.3056 Underfull \hbox (badness 1430) in paragraph at lines 3035--3056 []\OT1/cmr/m/n/10 plot(rate conc, data = Puromycin, las = 1, xlab = "Sub-stra te ! You can't use `macro parameter character #' in vertical mode. l.3057 # # using partial linearity ! You can't use `macro parameter character #' in vertical mode. l.3057 ## using partial linearity ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3061 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3062 \end{Examples} ! Undefined control sequence. l.3063 \HeaderA {quakes}{Locations of Earthquakes off Fiji}{quakes} ! Undefined control sequence. l.3064 \keyword {datasets}{quakes} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3066 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3069 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3071 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3075 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3077 \begin{Format} ! Undefined control sequence. l.3080 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.3081 [,1] & lat & numeric & Latitude of event\\{} ! Misplaced alignment tab character &. l.3081 [,1] & lat & numeric & Latitude of event\\{} ! Misplaced alignment tab character &. l.3081 [,1] & lat & numeric & Latitude of event\\{} ! Misplaced alignment tab character &. l.3082 [,2] & long & numeric & Longitude\\{} ! Misplaced alignment tab character &. l.3082 [,2] & long & numeric & Longitude\\{} ! Misplaced alignment tab character &. l.3082 [,2] & long & numeric & Longitude\\{} ! Misplaced alignment tab character &. l.3083 [,3] & depth & numeric & Depth (km)\\{} ! Misplaced alignment tab character &. l.3083 [,3] & depth & numeric & Depth (km)\\{} ! Misplaced alignment tab character &. l.3083 [,3] & depth & numeric & Depth (km)\\{} ! Misplaced alignment tab character &. l.3084 [,4] & mag & numeric & Richter Magnitude\\{} ! Misplaced alignment tab character &. l.3084 [,4] & mag & numeric & Richter Magnitude\\{} ! Misplaced alignment tab character &. l.3084 [,4] & mag & numeric & Richter Magnitude\\{} ! Misplaced alignment tab character &. l.3085 [,5] & stations & numeric & Number of stations reporting ! Misplaced alignment tab character &. l.3085 [,5] & stations & numeric & Number of stations reporting ! Misplaced alignment tab character &. l.3085 [,5] & stations & numeric & Number of stations reporting ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3087 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3089 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3094 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3096 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.3100 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3102 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3103 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3106 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3107 \end{Examples} ! Undefined control sequence. l.3108 \HeaderA {randu}{Random Numbers from Congruential Generator RANDU}{randu} ! Undefined control sequence. l.3109 \keyword {datasets}{randu} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3111 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3114 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3116 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3120 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3122 \begin{Format} ! Undefined control sequence. l.3123 ... observations on 3 variables named \code {x}, ! Undefined control sequence. l.3124 \code {y} and \code{z} which give the first, second and third random ! Undefined control sequence. l.3124 \code{y} and \code {z} which give the first, second and third random ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3126 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3128 \begin{Details} \relax [438] [14 ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3138 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3140 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3142 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3144 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3145 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3146 # # We could re-generate the dataset by the following R code ! You can't use `macro parameter character #' in horizontal mode. l.3146 ## We could re-generate the dataset by the following R code ! Missing $ inserted. $ l.3149 seed <<- ((2^ 16 + 3) * seed) %% (2^31) ! Extra }, or forgotten $. l.3151 } ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3156 \end{ExampleCode} ! Missing $ inserted. $ l.3156 \end{ExampleCode} ! Missing } inserted. } l.3156 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3157 \end{Examples} ! Undefined control sequence. l.3158 \HeaderA {rivers}{Lengths of Major North American Rivers}{rivers} ! Undefined control sequence. l.3159 \keyword {datasets}{rivers} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3161 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3164 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3166 \begin{Usage} Overfull \hbox (81.79504pt too wide) in paragraph at lines 3137--3167 \OT1/cmr/m/n/10 400)[]$ ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3170 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3172 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3174 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3176 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3178 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3180 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3183 \end{References} ! Undefined control sequence. l.3184 \HeaderA {rock}{Measurements on Petroleum Rock Samples}{rock} ! Undefined control sequence. l.3185 \keyword {datasets}{rock} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3187 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3189 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3191 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3195 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3197 \begin{Format} ! Undefined control sequence. l.3201 \Tabular {rll}{ ! Misplaced alignment tab character &. l.3202 [,1] & area & area of pores space, in pixels ! Misplaced alignment tab character &. l.3202 [,1] & area & area of pores space, in pixels ! Misplaced alignment tab character &. l.3204 [,2] & peri & perimeter in pixels \\{} ! Misplaced alignment tab character &. l.3204 [,2] & peri & perimeter ] Chapter 4in pixels \\{} ! Misplaced alignment tab character &. l.3205 [,3] & shape & perimeter/sqrt(area) \\{} ! Misplaced alignment tab character &. l.3205 [,3] & shape & perimeter/sqrt(area) \\{} ! Misplaced alignment tab character &. l.3206 [,4] & perm & permeability in milli-Darcies ! Misplaced alignment tab character &. l.3206 [,4] & perm & permeability in milli-Darcies ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3208 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3210 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3215 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3217 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3219 \end{Source} ! Undefined control sequence. l.3220 \HeaderA {sleep}{Student's Sleep Data}{sleep} ! Undefined control sequence. l.3221 \keyword {datasets}{sleep} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3223 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3226 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3228 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3232 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3234 \begin{Format} ! Undefined control sequence. l.3237 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.3238 [, 1] & extra & numeric & increase in hours of sleep\\{} ! Misplaced alignment tab character &. l.3238 [, 1] & extra & numeric & increase in hours of sleep\\{} ! Misplaced alignment tab character &. l.3238 [, 1] & extra & numeric & increase in hours of sleep\\{} ! Misplaced alignment tab character &. l.3239 [, 2] & [15]group & factor & drug given\\{} ! Misplaced alignment tab character &. l.3239 [, 2] & group & factor & drug given\\{} ! Misplaced alignment tab character &. l.3239 [, 2] & group & factor & drug given\\{} ! Misplaced alignment tab character &. l.3240 [, 3] & ID & factor & patient ID ! Misplaced alignment tab character &. l.3240 [, 3] & ID & factor & patient ID ! Misplaced alignment tab character &. l.3240 [, 3] & ID & factor & patient ID ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3242 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3244 \begin{Details} \relax ! Undefined control sequence. l.3245 The \code {group} variable name may be misleading about the data: ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3248 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3250 \begin{Source} \relax ! Undefined control sequence. l.3253 \emph{The Journal of Physiology} \bold {32}, 501--510. ! Undefined control sequence. l.3257 \emph{Biometrika}, \bold {6}, 20. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3258 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3260 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3264 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3266 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3267 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3269 # # Student's paired t-test ! You can't use `macro parameter character #' in horizontal mode. l.3269 ## Student's paired t-test ! You can't use `macro parameter character #' in vertical mode. l.3274 # # The sleep *prolongations* ! You can't use `macro parameter character #' in vertical mode. l.3274 ## The sleep *prolongations* ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3281 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3282 \end{Examples} ! Undefined control sequence. l.3283 \HeaderA {stackloss}{Brownlee's Stack Loss Plant Data}{stackloss} ! Undefined control sequence. l.3284 \aliasA {stack.loss}{stackloss}{stack.loss} ! Undefined control sequence. l.3285 \aliasA {stack.x}{stackloss}{stack.x} ! Undefined control sequence. l.3286 \keyword {datasets}{stackloss} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3288 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3291 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3293 \begin{Usage} [439] [16 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3300 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3302 \begin{Format} ! Undefined control sequence. l.3303 \code {stackloss} is a data frame with 21 observations on 4 variables. ! Undefined control sequence. l.3306 \Tabular {rll}{ ! Misplaced alignment tab character &. l.3307 [,1] & \code{Air Flow} & Flow of cooling air\\{} ! Undefined control sequence. l.3307 [,1] & \code {Air Flow} & Flow of cooling air\\{} ! Misplaced alignment tab character &. l.3307 [,1] & \code{Air Flow} & Flow of cooling air\\{} ! Misplaced alignment tab character &. l.3308 [,2] & \code{Water Temp} & Cooling Water Inlet ! Undefined control sequence. l.3308 [,2] & \code {Water Temp} & Cooling Water Inlet ! Misplaced alignment tab character &. l.3308 [,2] & \code{Water Temp} & Cooling Water Inlet ! Misplaced alignment tab character &. l.3310 [,3] & \code{Acid Conc.} & Concentration of acid [per ! Undefined control sequence. l.3310 [,3] & \code {Acid Conc.} & Concentration of acid [per ! Misplaced alignment tab character &. l.3310 [,3] & \code{Acid Conc.} & Concentration of acid [per ! Misplaced alignment tab character &. l.3312 [,4] & \code{stack.loss} & Stack loss\\{} ! Undefined control sequence. l.3312 [,4] & \code {stack.loss} & Stack loss\\{} ! Misplaced alignment tab character &. l.3312 [,4] & \code{stack.loss} & Stack loss\\{} Underfull \hbox (badness 10000) in paragraph at lines 3306--3314 ! Undefined control sequence. l.3315 ...ibility with S-PLUS, the data sets \code {stack.x}, a matrix ! Undefined control sequence. l.3317 \code {stack.loss}, the numeric vector giving the fourth (dependent) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3319 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3321 \begin{Details} \relax ! Undefined control sequence. l.3323 oxidation of ammonia (NH\eqn {_3}{}) to nitric acid ! Missing $ inserted. $ l.3323 oxidation of ammonia (NH\eqn{_ 3}{}) to nitric acid ! Extra }, or forgotten $. l.3323 oxidation of ammonia (NH\eqn{_3} {}) to nitric acid ! Undefined control sequence. l.3324 (HNO\eqn {_3}{}). The nitric oxides produced are absorbed in a ! Missing $ inserted. $ l.3327 Overfull \hbox (346.18011pt too wide) in paragraph at lines 3315--3327 \OT1/cmr/m/n/10 (NH$[][])\OML/cmm/m/it/10 tonitricacid\OT1/cmr/m/n/10 (\OML/cmm /m/it/10 HNO[][]\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 :Thenitricoxidesproducedareab sorbedinacountercurrentabsorptiontower[]:\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 Brow nlee; citedbyDodge; slightlyreformattedbyMM:\OT1/cmr/m/n/10 )$ ! Undefined control sequence. l.3328 \code ] {Air Flow} represents the rate of operation of the plant. ! Undefined control sequence. l.3329 \code {Water Temp} is the temperature of cooling water circulated ! Undefined control sequence. l.3331 \code {Acid Conc.} is the concentration of the acid circulating, minus ! Undefined control sequence. l.3333 \code {stack.loss} (the dependent variable) is 10 times the percentage ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3337 \end{Details} ! Missing } inserted. } l.3337 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3339 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3343 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3345 \begin{References} \relax ! Undefined control sequence. l.3354 \emph{Lecture Notes in Statistics} \bold {109}, Springer-Verlag, New Y... ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3355 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3357 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3358 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3361 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3362 \end{Examples} ! Undefined control sequence. l.3363 \HeaderA {state}{US State Facts and Figures}{state} ! Undefined control sequence. l.3364 \methaliasA {state.abb}{state}{state.abb} ! Undefined control sequence. l.3365 \methaliasA {state.area}{state}{state.area} ! Undefined control sequence. l.3366 \methaliasA {state.center}{state}{state.center} ! Undefined control sequence. l.3367 \methaliasA {state.division}{state}{state.division} ! Undefined control sequence. l.3368 \methaliasA {state.name}{state}{state.name} ! Undefined control sequence. l.3369 \methaliasA {state.region}{state}{state.region} ! Undefined control sequence. l.3370 \methaliasA {state.x77}{state}{state.x77} ! Undefined control sequence. l.3371 \keyword {datasets}{state} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3373 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3376 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3378 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 3350--3379 \OT1/cmr/m/n/10 Facts and Fig-uresstate state.abbstatestate.abb state.areastate state.area Underfull \hbox (badness 10000) in paragraph at lines 3350--3379 \OT1/cmr/m/n/10 state.centerstatestate.center state.divisionstatestate.division ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3388 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3390 \begin{Details} \relax ! Undefined control sequence. l.3391 \R {} currently contains the following ``state'' data sets. Note ! Undefined control sequence. \code {state.abb}: l.3396 \item[\code{state.abb}:] character vector of 2-letter abbreviations ! Undefined control sequence. \code {state.area}: l.3398 \item[\code{state.area}:] numeric vector of state areas (in square [440 Chapter 5 [17]] ! Undefined control sequence. \code {state.center}: l.3400 \item[\code{state.center}:] list with components named \code{x} and ! Undefined control sequence. l.3400 ...ter}:] list with components named \code {x} and ! Undefined control sequence. l.3401 \code {y} giving the approximate geographic center of each state in ! Undefined control sequence. \code {state.division}: l.3404 \item[\code{state.division}:] factor giving state divisions (New ! Undefined control sequence. \code {state.name}: l.3408 \item[\code{state.name}:] character vector giving the full state ! Undefined control sequence. \code {state.region}: l.3410 \item[\code{state.region}:] factor giving the region (Northeast, ! Undefined control sequence. \code {state.x77}: l.3412 \item[\code{state.x77}:] matrix with 50 rows and 8 columns giving ! Undefined control sequence. \code {Population}: l.3416 \item[\code{Population}:] population estimate as of July 1, ! Undefined control sequence. \code {Income}: l.3418 \item[\code{Income}:] per capita income (1974) ! Undefined control sequence. \code {Illiteracy}: l.3419 \item[\code{Illiteracy}:] illiteracy (1970, percent of ! Undefined control sequence. \code {Life Exp}: l.3421 \item[\code{Life Exp}:] life expectancy in years (1969--71) ! Undefined control sequence. \code {Murder}: l.3422 \item[\code{Murder}:] murder and non-negligent manslaughter rate ! Undefined control sequence. \code {HS Grad}: l.3424 \item[\code{HS Grad}:] percent high-school graduates (1970) ! Undefined control sequence. \code {Frost}: l.3425 \item[\code{Frost}:] mean number of days with minimum ! Undefined control sequence. \code {Area}: l.3428 \item[\code{Area}:] land area in square miles ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3435 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3437 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3443 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3445 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3449 \end{References} ! Undefined control sequence. l.3450 \HeaderA {sunspot.month}{Monthly Sunspot Data, from 1749 to "Present"}... ! Undefined control sequence. l.3451 \keyword {datasets}{sunspot.month} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3453 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3457 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3459 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3463 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3465 \begin{Format} ! Undefined control sequence. l.3466 The univariate time series \code {sunspot.year} and ! Undefined control sequence. l.3467 \code {sunspot.month} contain 289 and 2988 observations, respectively. ! Undefined control sequence. l.3468 The objects are of class \code {"ts"}. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3469 \end{Format} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3471 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3473 \end{Author} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3475 \begin{Source} \relax ! Undefined control sequence. l.3478 Currently at \url {http://www.sidc.be/silso/datafiles} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3479 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3481 \begin{SeeAlso} \relax ! Undefined control sequence. l.3482 \code {sunspot.month} is a longer version of \code{\LinkA{sunspots}{su... ! Undefined control sequence. l.3482 ...spot.month} is a longer version of \code {\LinkA{sunspots}{sunspots}}; ! Undefined control sequence. l.3482 ...nth} is a longer version of \code{\LinkA {sunspots}{sunspots}}; ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3485 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3487 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3488 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3490 # # Compare the monthly series ! You can't use `macro parameter character #' in horizontal mode. l.3490 ## Compare the monthly series ! Misplaced alignment tab character &. l.3492 main="sunspot.month & sunspots [package'datasets']", col=2) ! You can't use `macro parameter character #' in horizontal mode. l.3493 lines(sunspots) # -> faint differences where they overlap Underfull \hbox (badness 1142) in paragraph at lines 3466--3494 \OT1/cmr/m/n/10 2988 ob-ser-va-tions, re-spec-tively. The ob-jects are of class "ts". R Underfull \hbox (badness 1067) in paragraph at lines 3466--3494 \OT1/cmr/m/n/10 WDC-SILSO, So-lar In-flu-ences Data Anal-y-sis Cen-ter (SIDC), Royal Ob- ! You can't use `macro parameter character #' in vertical mode. l.3495 # # Now look at the difference : ! You can't use `macro parameter character #' in vertical mode. l.3495 ## Now look at the difference : ! You can't use `macro parameter character #' in horizontal mode. l.3497 tsp(sunspot.month)[c(1,3)]) # # Start & Periodicity are the same ! You can't use `macro parameter character #' in horizontal mode. l.3497 tsp(sunspot.month)[c(1,3)]) ## Start & Periodicity are the same ! Misplaced alignment tab character &. l.3497 tsp(sunspot.month)[c(1,3)]) ## Start & Periodicity are the same ! You can't use `macro parameter character #' in horizontal mode. l.3499 ...eq <- sunspots == sunspot.month[1:n1]) # > 132 are different ! Underfull \hbox (badness 10000) in paragraph at lines 3495--3505 []\OT1/cmr/m/n/10 Now look at the dif-fer-ence : all(tsp(sunspots) [c(1,3)] == Underfull \hbox (badness 6252) in paragraph at lines 3495--3505 \OT1/cmr/m/n/10 tsp(sunspot.month)[c(1,3)]) Start Pe-ri-od-ic-ity are the sam e n1 <- [441] [18 ! You can't use `macro parameter character #' in vertical mode. l.3506 # # How to recreate the "old" sunspot.month (R <= 3.0.3): ! You can't use `macro parameter character #' in vertical mode. l.3506 ## How to recreate the "old" sunspot.month (R <= 3.0.3): ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3515 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3516 \end{Examples} ! Undefined control sequence. l.3517 \HeaderA {sunspot.year}{Yearly Sunspot Data, 1700--1988}{sunspot.year} ! Undefined control sequence. l.3518 \keyword {datasets}{sunspot.year} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3520 \begin{Description} \relax Underfull \hbox (badness 1194) in paragraph at lines 3506--3522 \OT1/cmr/m/n/10 1663L, 2151L, 2329L, 2498L, 2594L, 2694L, 2819L), res10 = c(1L, 1L, Underfull \hbox (badness 2189) in paragraph at lines 3506--3522 \OT1/cmr/m/n/10 1L, -1L, -1L, -1L, 1L, -1L, 1L, 1L, 1L, 1L, 1L, 20L, 1L)) ssm0 <- Underfull \hbox (badness 1917) in paragraph at lines 3506--3522 \OT1/cmr/m/n/10 sunspot.month[1:2988] with(as.data.frame(.sunspot.diff), ssm0[i ] <<- ssm0[i] Underfull \hbox (badness 1033) in paragraph at lines 3506--3522 \OT1/cmr/m/n/10 - res10/10) sunspot.month.0 <- ts(ssm0, start = 1749, fre-quenc y = 12) ! Undefined control sequence. l.3524 \code {\LinkA{sunspot.month}{sunspot.month}}, though starting slightly... ! Undefined control sequence. l.3524 \code{\LinkA {sunspot.month}{sunspot.month}}, though starting slightly... ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3525 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3527 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3531 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3533 \begin{Format} ! Undefined control sequence. l.3534 The univariate time series \code {sunspot.year} contains 289 ! Undefined control sequence. l.3535 observations, and is of class \code {"ts"}. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3536 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3538 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3541 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3543 \begin{SeeAlso} \relax ! Undefined control sequence. l.3544 ...emph{monthly} sunspot numbers, see \code {\LinkA{sunspot.month}{sun... ! Undefined control sequence. l.3544 ...nthly} sunspot numbers, see \code{\LinkA {sunspot.month}{sunspot.mo... ! Undefined control sequence. l.3545 and \code {\LinkA{sunspots}{sunspots}}. ! Undefined control sequence. l.3545 and \code{\LinkA {sunspots}{sunspots}}. ! Undefined control sequence. l.3549 \url {http://www.sidc.be/silso/datafiles} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3550 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3552 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3553 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3554 utils::str(sm <- sunspots)# the monthly version we keep unchanged ! You can't use `macro parameter character #' in horizontal mode. l.3556 # # The common time interval ! You can't use `macro parameter character #' in horizontal mode. l.3556 ## The common time interval ! You can't use `macro parameter character #' in horizontal mode. l.3557 ...- c(max(start(sm), start(sy)), 1)) # Jan 1749 ! You can't use `macro parameter character #' in horizontal mode. l.3558 ...- c(min( end(sm)[1],end(sy)[1]), 12)) # Dec 1983 ! You can't use `macro parameter character #' in horizontal mode. l.3560 s.y <- window(sy, start=t1, end=t2[1]) # {irrelevant warning} ! You can't use `macro parameter character #' in horizontal mode. l.3562 # # The yearly series *is* close to the averages of the mont... ! You can't use `macro parameter character #' in horizontal mode. l.3562 ## The yearly series *is* close to the averages of the mont... ! You can't use `macro parameter character #' in horizontal mode. l.3564 # # NOTE: Strangely, correctly weighting the number of days per month ! You can't use `macro parameter character #' in horizontal mode. l.3564 ## NOTE: Strangely, correctly weighting the number of days per month ! You can't use `macro parameter character #' in horizontal mode. l.3565 # # (using 28.25 for February) is *not* closer than the simple m... ! You can't use `macro parameter character #' in horizontal mode. l.3565 ## ] (using 28.25 for February) is *not* closer than the simple m... ! You can't use `macro parameter character #' in horizontal mode. l.3567 ...(s.m, FUN = mean)) # 0.0013 ! You can't use `macro parameter character #' in horizontal mode. l.3568 ...(s.m, FUN = weighted.mean, w = ndays)) # 0.0017 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3569 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3570 \end{Examples} ! Undefined control sequence. l.3571 \HeaderA {sunspots}{Monthly Sunspot Numbers, 1749--1983}{sunspots} ! Undefined control sequence. l.3572 \keyword {datasets}{sunspots} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3574 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3578 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3580 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3584 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3586 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3588 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3590 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3595 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3597 \begin{SeeAlso} \relax ! Undefined control sequence. l.3598 \code {\LinkA{sunspot.month}{sunspot.month}} has a longer (and a bit d... ! Undefined control sequence. l.3598 \code{\LinkA {sunspot.mon [19]th}{sunspot.month}} has a longer (and a bit d... ! Undefined control sequence. l.3599 \code {\LinkA{sunspot.year}{sunspot.year}} is a much shorter one. See... ! Undefined control sequence. l.3599 \code{\LinkA {sunspot.year}{sunspot.year}} is a much shorter one. See... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3601 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3603 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3604 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3608 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3609 \end{Examples} ! Undefined control sequence. l.3610 \HeaderA {swiss}{Swiss Fertility and Socioeconomic Indicators (1888) D... ! Undefined control sequence. l.3611 \keyword {datasets}{swiss} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3613 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3616 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3618 \begin{Usage} Underfull \hbox (badness 1406) in paragraph at lines 3587--3619 \OT1/cmr/m/n/10 A time se-ries of monthly data from 1749 to 1983. An-drews, D. Underfull \hbox (badness 1221) in paragraph at lines 3587--3619 \OT1/cmr/m/n/10 F. and Herzberg, A. M. (1985) \OT1/cmr/m/it/10 Data: A Col-lec- tion of Prob-lems from [442] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3622 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3624 \begin{Format} ! Undefined control sequence. l.3626 is in percent, i.e., in \eqn {[0, 100]}{}. ! Undefined control sequence. l.3629 \Tabular {rll}{ ! Misplaced alignment tab character &. l.3630 [,1] & Fertility & \eqn{I_g}{}, `common standardized ! Misplaced alignment tab character &. l.3630 [,1] & Fertility & \eqn{I_g}{}, `common standardized ! Undefined control sequence. l.3630 [,1] & Fertility & \eqn {I_g}{}, `common standardized ! Missing $ inserted. $ l.3630 [,1] & Fertility & \eqn{I_ g}{}, `common standardized ! Extra }, or forgotten $. l.3630 [,1] & Fertility & \eqn{I_g} {}, `common standardized ! Misplaced alignment tab character &. l.3632 [,2] & Agriculture& \% of males involved in agriculture ! Misplaced alignment tab character &. l.3632 [,2] & Agriculture& \% of males involved in agriculture ! Misplaced alignment tab character &. l.3634 [,3] & Examination& \% draftees receiving highest mark ! Misplaced alignment tab character &. l.3634 [,3] & Examination& \% draftees receiving highest mark ! Misplaced alignment tab character &. l.3636 [,4] & Education & \% education beyond primary school for draftees.\\{} ! Misplaced alignment tab character &. l.3636 [,4] & Education & \% education beyond primary school for draftees.\\{} ! Misplaced alignment tab character &. l.3637 [,5] & Catholic & \% `catholic' (as opposed to `protestant').\\{} ! Misplaced alignment tab character &. l.3637 [,5] & Catholic & \% `catholic' (as opposed to `protestant').\\{} ! Misplaced alignment tab character &. l.3638 [,6] & Infant.Mortality& live births who live less than 1 ! Misplaced alignment tab character &. l.3638 [,6] & Infant.Mortality& live births who live less than 1 ! Extra }, or forgotten $. l.3640 } ! Missing $ inserted. $ l.3641 ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3644 \end{Format} ! Missing } inserted. } l.3644 \end{Format} ! Missing } inserted. } l.3644 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3646 \begin{Details} \relax ! Undefined control sequence. l.3656 Here, all variables are scaled to \eqn {[0, 100]}{}, where in the ! Undefined control sequence. l.3657 original, all but \code {"Catholic"} were scaled to \eqn{[0, 1]}{}. ! Undefined control sequence. l.3657 ...ut \code{"Catholic"} were scaled to \eqn {[0, 1]}{}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Co [20mpanion for explanation. Type H for immediate help. ... l.3658 \end{Details} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3660 \begin{Note} \relax ! Undefined control sequence. l.3662 \url {https://opr.princeton.edu/archive/pefp/switz.aspx}. ! Undefined control sequence. l.3664 They state that variables \code {Examination} and \code{Education} ! Undefined control sequence. l.3664 ...t variables \code{Examination} and \code {Education} ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3666 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3668 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3679 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3681 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3685 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3687 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3688 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3693 \end{ExampleCode} ! Missing $ inserted. $ l.3693 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3694 \end{Examples} ! Undefined control sequence. l.3695 \HeaderA {Theoph}{Pharmacokinetics of Theophylline}{Theoph} ! Undefined control sequence. l.3696 \keyword {datasets}{Theoph} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.3698 \begin{Description} \relax ! Undefined control sequence. l.3699 The \code {Theoph} data frame has 132 rows and 5 columns of data from ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3701 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3703 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3707 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3709 \begin{Format} ! Undefined control sequence. l.3711 \code {c("nfnGroupedData", "nfGroupedData", "groupedData", "data.frame")} ! Undefined control sequence. l.3716 an ordered factor with levels \code {1}, \dots, \code{12} ! Undefined control sequence. l.3716 ...actor with levels \code{1}, \dots, \code {12} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3736 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3738 \begin{Details} \relax [443] ! Undefined control sequence. l.3747 ...ch a self-starting model function, \code {SSfol}, is available. ! Undefined control sequence. l.3749 ...set was originally part of package \code {nlme}, and that has ! Undefined control sequence. l.3750 methods (including for \code {[}, \code{as.data.frame}, \code{plot} and ! Undefined control sequence. l.3750 methods (including for \code{[}, \code {as.data.frame}, \code{plot} and ! Undefined control sequence. l.3750 ...or \code{[}, \code{as.data.frame}, \code {plot} and ! Undefined control sequence. l.3751 \code {print}) for its grouped-data classes. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3752 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3754 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3766 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3768 \begin{SeeAlso} \relax ! Undefined control sequence. l.3769 \code {\LinkA{SSfol}{SSfol}} ! Undefined control sequence. l.3769 \code{\LinkA {SSfol}{SSfol}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3770 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3772 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3773 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3790 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3791 \end{Examples} ! Undefined control sequence. l.3792 \HeaderA {Titanic}{Survival of passengers on the Titanic}{Titanic} ! Undefined control sequence. l.3793 \keyword {datasets}{Titanic} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [21 l.3795 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3799 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3801 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3805 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3807 \begin{Format} ! Undefined control sequence. l.3813 \Tabular {rll}{ ! Misplaced alignment tab character &. l.3814 No & Name & Levels\\{} ! Misplaced alignment tab character &. l.3814 No & Name & Levels\\{} ! Misplaced alignment tab character &. l.3815 1 & Class & 1st, 2nd, 3rd, Crew\\{} ! Misplaced alignment tab character &. l.3815 1 & Class & 1st, 2nd, 3rd, Crew\\{} ! Misplaced alignment tab character &. l.3816 2 & Sex & Male, Female\\{} ! Misplaced alignment tab character &. l.3816 2 & Sex & Male, Female\\{} ! Misplaced alignment tab character &. l.3817 3 & Age & Child, Adult\\{} ! Misplaced alignment tab character &. l.3817 3 & Age & Child, Adult\\{} ! Misplaced alignment tab character &. l.3818 4 & Survived & No, Yes ! Misplaced alignment tab character &. l.3818 4 & Survived & No, Yes ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3820 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3822 \begin{Details} \relax ! Undefined control sequence. l.3840 (\url {http://www.rmplc.co.uk/eduweb/sites/phind}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3841 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3843 \begin{Source} \relax ! Undefined control sequence. l.3846 ...{Journal of Statistics Education}, \bold {3}. ! Undefined control sequence. l.3847 \url {https://www.amstat.org/publications/jse/v3n3/datasets.dawson.html} [444]] ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3857 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3859 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3860 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3863 # # Higher survival rates in children? ! You can't use `macro parameter character #' in horizontal mode. l.3863 ## Higher survival rates in children? ! You can't use `macro parameter character #' in horizontal mode. l.3865 # # Higher survival rates in females? ! You can't use `macro parameter character #' in horizontal mode. l.3865 ## Higher survival rates in females? ! You can't use `macro parameter character #' in horizontal mode. l.3867 # # Use loglm() in package 'MASS' for further analysis ... ! You can't use `macro parameter character #' in horizontal mode. l.3867 ## Use loglm() in package 'MASS' for further analysis ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3868 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3869 \end{Examples} ! Undefined control sequence. l.3870 \HeaderA {ToothGrowth}{The Effect of Vitamin C on Tooth Growth in Guin... ! Undefined control sequence. l.3871 \keyword {datasets}{ToothGrowth} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3873 \begin{Description} \relax ! Undefined control sequence. l.3878 as \code {VC}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3879 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3881 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3885 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3887 \begin{Format} ! Undefined control sequence. l.3890 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.3891 [,1] & len & numeric & Tooth length\\{} ! Misplaced alignment tab character &. l.3891 [,1] & len & numeric & Tooth length\\{} ! Misplaced alignment tab character &. l.3891 [,1] & len & numeric & Tooth length\\{} ! Misplaced alignment tab character &. l.3892 [,2] & supp & factor & Supplement type (VC or OJ).\\{} ! Misplaced alignment tab character &. l.3892 [,2] & supp & factor & Supplement type (VC or OJ).\\{} ! Misplaced alignment tab character &. l.3892 [,2] & supp & factor & Supplement type (VC or OJ).\\{} ! Misplaced alignment tab character &. l.3893 [,3] & dose & numeric & Dose in milligrams/day ! Misplaced alignment tab character &. l.3893 [,3] & dose & numeric & Dose in milligrams/day ! Misplaced alignment tab character &. l.3893 [,3] & dose & numeric & Dose in milligrams/day ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3895 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3897 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3901 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3903 \begin{References} \relax ! Undefined control sequence. l.3911 \bold {33(5)}: 491--504. ! Undefined control sequence. l.3912 \url {http://jn.nutrition.org/content/33/5/491.full.pdf} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3913 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3915 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3916 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3920 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3921 \end{Examples} ! Undefined control sequence. l.3922 \HeaderA {treering}{Yearly Treering Data, -6000--1979}{treering} ! Undefined control sequence. l.3923 \keyword {datasets}{treering} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3925 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3927 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3929 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3933 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3935 \begin{Format} ! Undefined control sequence. l.3937 class \code {"ts"}. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3940 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3942 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3945 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3947 \begin{Source} \relax ! Undefined control sequence. l.3949 \url {http://www-personal.buseco.monash.edu.au/~hyndman/TSDL/}, ! Undefined control sequence. l.3950 series \file {CA535.DAT} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3951 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3953 \begin{References} \relax ! Undefined control sequence. l.3955 \url {http://www.ltrr.arizona.edu/~hallman/sitephotos/meth.html} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3956 \end{References} ! Undefined control sequence. l.3957 \HeaderA {trees}{Girth, Height and Volume for Black Cherry Trees}{trees} ! Undefined control sequence. l.3958 \keyword {datasets}{trees} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3960 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3965 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3967 \begin{Usage} Underfull \hbox (badness 1688) in paragraph at lines 3939--3968 \OT1/cmr/m/n/10 some pho-tos of Methuse-lah Walk see http://www.ltrr.arizona.ed u/ hall- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3971 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3973 \begin{Format} ! Undefined control sequence. l.3976 \Tabular {rlll}{ ! Undefined control sequence. l.3977 \code {[,1]} & \code{Girth} & numeric ! Misplaced alignment tab character &. l.3977 \code{[,1]} & \code{Girth} & numeric ! Undefined control sequence. l.3977 \code{[,1]} & \code {Girth} & numeric ! Misplaced alignment tab character &. l.3977 \code{[,1]} & \code{Girth} & numeric ! Misplaced alignment tab character &. l.3978 & Tree diameter in inches\\{} ! Undefined control sequence. l.3979 \code {[,2]} & \code{Height}& numeric ! Misplaced alignment tab character &. l.3979 \code{[,2]} & \code{Height}& numeric ! Undefined control sequence. l.3979 \code{[,2]} & \code {Height}& numeric ! Misplaced alignment tab character &. l.3979 \code{[,2]} & \code{Height}& numeric ! Misplaced alignment tab character &. l.3980 & Height in ft\\{} ! Undefined control sequence. l.3981 \code {[,3]} & \code{Volume}& numeric ! Misplaced alignment tab character &. l.3981 \code{[,3]} & \code{Volume}& numeric ! Undefined control sequence. l.3981 \code{[,3]} & \code {Volume}& numeric ! Misplaced alignment tab character &. l.3981 \code{[,3]} & \code{Volume}& numeric ! Misplaced alignment tab character &. l.3982 & Volume of timber in cubic ft\\{}} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3983 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3985 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3989 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3991 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3995 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3997 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3998 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4007 # # i.e., Volume ~= c * Height * Girth^2 seems reasonable ! You can't use `macro parameter character #' in horizontal mode. l.4007 ## i.e., Volume ~= c * Height * Girth^2 seems reasonable ! Missing $ inserted. $ l.4007 ## i.e., Volume ~= c * Height * Girth^ 2 seems reasonable ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4008 \end{ExampleCode} ! Missing $ inserted. $ l.4008 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4009 \end{Examples} ! Undefined control sequence. l.4010 \HeaderA {UCBAdmissions}{Student Admissions at UC Berkeley}{UCBAdmissi... ! Undefined control sequence. l.4011 \keyword {datasets}{UCBAdmissions} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4013 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4016 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4018 \begin{Usage} [445 [22]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4022 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4024 \begin{Format} ! Undefined control sequence. l.4030 \Tabular {rll}{ ! Misplaced alignment tab character &. l.4031 No & Name & Levels\\{} ! Misplaced alignment tab character &. l.4031 No & Name & Levels\\{} ! Misplaced alignment tab character &. l.4032 1 & Admit & Admitted, Rejected\\{} ! Misplaced alignment tab character &. l.4032 1 & Admit & Admitted, Rejected\\{} ! Misplaced alignment tab character &. l.4033 2 & Gender & Male, Female\\{} ! Misplaced alignment tab character &. l.4033 2 & Gender & Male, Female\\{} ! Misplaced alignment tab character &. l.4034 3 & Dept & A, B, C, D, E, F ! Misplaced alignment tab character &. l.4034 3 & Dept & A, B, C, D, E, F ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4036 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4038 \begin{Details} \relax ! Undefined control sequence. l.4052 ...data, such as the general-purpose \LinkA {mosaicplot}{mosaicplot} ! Undefined control sequence. l.4053 or the \LinkA {fourfoldplot}{fourfoldplot} for 2-by-2-by-\eqn{k}{} tab... ! Undefined control sequence. l.4053 ...ldplot}{fourfoldplot} for 2-by-2-by-\eqn {k}{} tables. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4054 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4056 \begin{References} \relax ! Undefined control sequence. l.4059 \emph{Science}, \bold {187}, 398--403. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4060 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4062 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4063 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4065 # # Data aggregated over departments ! You can't use `macro parameter character #' in horizontal mode. l.4065 ## Data aggregated over departments ! You can't use `macro parameter character #' in horizontal mode. l.4069 # # Data for individual departments ! You can't use `macro parameter character #' in horizontal mode. l.4069 ## Data for individual departments ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4078 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4079 \end{Examples} ! Undefined control sequence. l.4080 \HeaderA {UKDriverDeaths}{Road Casualties in Great Britain 1969--84}{U... ! Undefined control sequence. l.4081 \aliasA {Seatbelts}{UKDriverDeaths}{Seatbelts} ! Undefined control sequence. l.4082 \keyword {datasets}{UKDriverDeaths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4084 \begin{Description} \relax ! Undefined control sequence. l.4085 \code {UKDriverDeaths} is a time series giving the monthly totals ! Undefined control sequence. l.4090 \code {Seatbelts} is more information on the same problem. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4091 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4093 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4098 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4100 \begin{Format} ! Undefined control sequence. l.4101 \code {Seatbelts} is a multiple time series, with columns ! Undefined control sequence. \code {DriversKilled} l.4104 \item[\code{DriversKilled}] car drivers killed. ! Undefined control sequence. \code {drivers} l.4105 \item[\code{drivers}] same as \code{UKDriverDeaths}. ! Undefined control sequence. l.4105 \item[\code{drivers}] same as \code {UKDriverDeaths}. ! Undefined control sequence. \code {front} l.4106 \item[\code{front}] front-seat passengers killed or seriously injured. [446 [23]] ! Undefined control sequence. \code {rear} l.4107 \item[\code{rear}] rear-seat passengers killed or seriously injured. ! Undefined control sequence. \code {kms} l.4108 \item[\code{kms}] distance driven. ! Undefined control sequence. \code {PetrolPrice} l.4109 \item[\code{PetrolPrice}] petrol price. ! Undefined control sequence. \code {VanKilled} l.4110 \item[\code{VanKilled}] number of van (`light goods vehicle') ! Undefined control sequence. \code {law} l.4112 \item[\code{law}] 0/1: was the law in effect that month? ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4116 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4118 \begin{Source} \relax ! Undefined control sequence. l.4125 \url {http://www.ssfpack.com/dkbook/} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4126 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4128 \begin{References} \relax ! Undefined control sequence. l.4132 series B, \bold {149}, 187--227. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4133 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4135 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4136 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4138 # # work with pre-seatbelt period to identify a model, use logs ! You can't use `macro parameter character #' in horizontal mode. l.4138 ## work with pre-seatbelt period to identify a model, use logs ! Missing $ inserted. $ l.4147 ! You can't use `macro parameter character #' in vertical mode. l.4148 # # now see the effect of the explanatory variables ! You can't use `macro parameter character #' in vertical mode. l.4148 ## now see the effect of the explanatory variables ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4153 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4154 \end{Examples} ! Undefined control sequence. l.4155 \HeaderA {UKgas}{UK Quarterly Gas Consumption}{UKgas} ! Undefined control sequence. l.4156 \keyword {datasets}{UKgas} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4158 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4160 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4162 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4166 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4168 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4170 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4172 \begin{Source} \relax ! Undefined control sequence. l.4175 \url {http://www.ssfpack.com/dkbook/} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4176 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4178 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4179 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4180 # # maybe str(UKgas) ; plot(UKgas) ... ! You can't use `macro parameter character #' in horizontal mode. l.4180 ## maybe str(UKgas) ; plot(UKgas) ... ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4181 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4182 \end{Examples} ! Undefined control sequence. l.4183 \HeaderA {UKLungDeaths}{Monthly Deaths from Lung Diseases in the UK}{U... ! Undefined control sequence. l.4184 \aliasA {fdeaths}{UKLungDeaths}{fdeaths} ! Undefined control sequence. l.4185 \aliasA {ldeaths}{UKLungDeaths}{ldeaths} ! Undefined control sequence. l.4186 \aliasA {mdeaths}{UKLungDeaths}{mdeaths} ! Undefined control sequence. l.4187 \keyword {datasets}{UKLungDeaths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4189 \begin{Description} \relax ! Undefined control sequence. l.4192 both sexes (\code {ldeaths}), males (\code{mdeaths}) and ! Undefined control sequence. l.4192 both sexes (\code{ldeaths}), males (\code {mdeaths}) and ! Undefined control sequence. l.4193 females (\code {fdeaths}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4194 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4196 \begin{Usage} Underfull \hbox (badness 1163) in paragraph at lines 4169--4197 \OT1/cmr/m/n/10 J. (2001) \OT1/cmr/m/it/10 Time Se-ries Anal-y-sis by State Spa ce Meth-ods. \OT1/cmr/m/n/10 Ox-ford Uni- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4202 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4204 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4208 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4210 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4211 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4212 require(stats); require(graphics) # for time ! You can't use `macro parameter character #' in horizontal mode. l.4215 # # Better labels: ! You can't use `macro parameter character #' in horizontal mode. l.4215 ## Better labels: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4219 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4220 \end{Examples} ! Undefined control sequence. l.4221 \HeaderA {USAccDeaths}{Accidental Deaths in the US 1973--1978}{USAccDe... ! Undefined control sequence. l.4222 \keyword {datasets}{USAccDeaths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4224 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4228 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4230 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4234 \end{Usage} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4236 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4240 \end{Source} ! Undefined control sequence. l.4241 \HeaderA {USArrests}{Violent Crime Rates by US State}{USArrests} ! Undefined control sequence. l.4242 \keyword {datasets}{USArrests} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4244 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4248 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4250 \begin{Usage} [447 [24]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4254 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4256 \begin{Format} ! Undefined control sequence. l.4260 \Tabular {rlll}{ ! Misplaced alignment tab character &. l.4261 [,1] & Murder & numeric & Murder arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4261 [,1] & Murder & numeric & Murder arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4261 [,1] & Murder & numeric & Murder arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4262 [,2] & Assault & numeric & Assault arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4262 [,2] & Assault & numeric & Assault arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4262 [,2] & Assault & numeric & Assault arrests (per 100,000)\\{} ! Misplaced alignment tab character &. l.4263 [,3] & UrbanPop & numeric & Percent urban population\\{} ! Misplaced alignment tab character &. l.4263 [,3] & UrbanPop & numeric & Percent urban population\\{} ! Misplaced alignment tab character &. l.4263 [,3] & UrbanPop & numeric & Percent urban population\\{} ! Misplaced alignment tab character &. l.4264 [,4] & Rape & numeric & Rape arrests (per 100,000) ! Misplaced alignment tab character &. l.4264 [,4] & Rape & numeric & Rape arrests (per 100,000) ! Misplaced alignment tab character &. l.4264 [,4] & Rape & numeric & Rape arrests (per 100,000) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4266 \end{Format} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4268 \begin{Note} \relax ! Undefined control sequence. l.4269 \code {USArrests} contains the data as in McNeil's monograph. For the ! Undefined control sequence. l.4270 \code {UrbanPop} percentages, a review of the table (No. 21) in the ! Undefined control sequence. l.4272 ... the same ``round to even'' rule that \R {}'s ! Undefined control sequence. l.4273 \code {\LinkA{round}{round}()} uses), as found by Daniel S Coven (Ariz... ! Undefined control sequence. l.4273 \code{\LinkA {round}{round}()} uses), as found by Daniel S Coven (Ariz... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4277 \end{Note} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4279 \begin{Source} \relax ! Undefined control sequence. l.4284 \url {http Chapter 6 [25s://books.google.ch/books?id=zl9qAAAAMAAJ&pg=PA20}. ! Misplaced alignment tab character &. l.4284 ...//books.google.ch/books?id=zl9qAAAAMAAJ& pg=PA20}. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4285 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4287 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4291 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4293 \begin{SeeAlso} \relax ! Undefined control sequence. l.4294 The \code {\LinkA{state}{state}} data sets. ! Undefined control sequence. l.4294 The \code{\LinkA {state}{state}} data sets. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4295 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4297 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4298 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.4304 # # Difference between 'USArrests' and its correction ! You can't use `macro parameter character #' in vertical mode. l.4304 ## Difference between 'USArrests' and its correction ! You can't use `macro parameter character #' in horizontal mode. l.4305 USArrests["Maryland", "UrbanPop"] # 67 -- the transcription error ! You can't use `macro parameter character #' in vertical mode. l.4309 # # also +/- 0.5 to restore the original .5 percentages ! You can't use `macro parameter character #' in vertical mode. l.4309 ## also +/- 0.5 to restore the original .5 percentages ! You can't use `macro parameter character #' in vertical mode. l.4315 # # ==> UA.C is now a *C*orrected version of USArrests ! You can't use `macro parameter character #' in vertical mode. l.4315 ## ==> UA.C is now a *C*orrected version of USArrests ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4316 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4317 \end{Examples} ] ! Undefined control sequence. l.4318 \HeaderA {USJudgeRatings}{Lawyers' Ratings of State Judges in the US S... ! Undefined control sequence. l.4319 \keyword {datasets}{USJudgeRatings} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4321 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4323 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4325 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4329 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4331 \begin{Format} ! Undefined control sequence. l.4334 \Tabular {rll}{ ! Misplaced alignment tab character &. l.4335 [,1] & CONT & Number of contacts of lawyer with judge.\\{} ! Misplaced alignment tab character &. l.4335 [,1] & CONT & Number of contacts of lawyer with judge.\\{} ! Misplaced alignment tab character &. l.4336 [,2] & INTG & Judicial integrity.\\{} ! Misplaced alignment tab character &. l.4336 [,2] & INTG & Judicial integrity.\\{} ! Misplaced alignment tab character &. l.4337 [,3] & DMNR & Demeanor.\\{} ! Misplaced alignment tab character &. l.4337 [,3] & DMNR & Demeanor.\\{} ! Misplaced alignment tab character &. l.4338 [,4] & DILG & Diligence.\\{} ! Misplaced alignment tab character &. l.4338 [,4] & DILG & Diligence.\\{} ! Misplaced alignment tab character &. l.4339 [,5] & CFMG & Case flow managing.\\{} ! Misplaced alignment tab character &. l.4339 [,5] & CFMG & Case flow managing.\\{} ! Misplaced alignment tab character &. l.4340 [,6] & DECI & Prompt decisions.\\{} ! Misplaced alignment tab character &. l.4340 [,6] & DECI & Prompt decisions.\\{} ! Misplaced alignment tab character &. l.4341 [,7] & PREP & Preparation for trial.\\{} ! Misplaced alignment tab character &. l.4341 [,7] & PREP & Preparation for trial.\\{} ! Misplaced alignment tab character &. l.4342 [,8] & FAMI & Familiarity with law.\\{} ! Misplaced alignment tab character &. l.4342 [,8] & FAMI & Familiarity with law.\\{} ! Misplaced alignment tab character &. l.4343 [,9] & ORAL & Sound oral rulings.\\{} ! Misplaced alignment tab character &. l.4343 [,9] & ORAL & Sound oral rulings.\\{} ! Misplaced alignment tab character &. l.4344 [,10] & WRIT & Sound written rulings.\\{} ! Misplaced alignment tab character &. l.4344 [,10] & WRIT & Sound written rulings.\\{} ! Misplaced alignment tab character &. l.4345 [,11] & PHYS & Physical ability.\\{} ! Misplaced alignment tab character &. l.4345 [,11] & PHYS & Physical ability.\\{} ! Misplaced alignment tab character &. l.4346 [,12] & RTEN & Worthy of retention. ! Misplaced alignment tab character &. l.4346 [,12] & RTEN & Worthy of retention. ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4348 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4350 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4352 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4354 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4355 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4358 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4359 \end{Examples} ! Undefined control sequence. l.4360 \HeaderA {USPersonalExpenditure}{Personal Expenditure Data}{USPersonal... ! Undefined control sequence. l.4361 \keyword {datasets}{USPersonalExpenditure} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4363 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4368 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4370 \begin{Usage} [448 [26] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4374 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4376 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4378 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4380 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4382 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4384 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4392 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4394 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4395 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4396 require(stats) # for medpolish ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4399 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4400 \end{Examples} ! Undefined control sequence. l.4401 \HeaderA {uspop}{Populations Recorded by the US Census}{uspop} ! Undefined control sequence. l.4402 \keyword {datasets}{uspop} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4404 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... ] l.4407 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4409 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4413 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4415 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4417 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4419 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4423 \end{Source} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4425 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4426 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4430 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4431 \end{Examples} ! Undefined control sequence. l.4432 \HeaderA {VADeaths}{Death Rates in Virginia (1940)}{VADeaths} ! Undefined control sequence. l.4433 \keyword {datasets}{VADeaths} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4435 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4437 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4439 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4443 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4445 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4447 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4449 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4457 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4459 \begin{Source} \relax ! Undefined control sequence. l.4463 \emph{American Sociological Review}, \bold {12}, 525--535. ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4464 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4466 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4470 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4472 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4473 \begin{ExampleCode} ! Missing $ inserted. $ l.4484 summary(aov.VAD <- aov(Drate ~ .^ 2, data = d.VAD)) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4488 \end{ExampleCode} ! Missing $ inserted. $ l.4488 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4489 \end{Examples} ! Undefined control sequence. l.4490 \HeaderA {volcano}{Topographic Information on Auckland's Maunga Whau V... ! Undefined control sequence. l.4491 \keyword {datasets}{volcano} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4493 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4497 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4499 \begin{Usage} Underfull \hbox (badness 1264) in paragraph at lines 4456--4500 \OML/cmm/m/it/10 c\OT1/cmr/m/n/10 (0\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 0\OML/cm m/m/it/10 ; \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 :\OT1/cmr/m/n/10 1\OML/cmm/m/it/1 0 ; \OT1/cmr/m/n/10 0))\OML/cmm/m/it/10 plot\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 a ov:VAD\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 par\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 op ar\OT1/cmr/m/n/10 )$ vol-can-oTo-po-graphic In-for-ma-tion on ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4503 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4505 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4509 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4511 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4514 \end{Source} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4516 \begin{SeeAlso} \relax ! Undefined control sequence. l.4517 \code {\LinkA{filled.contour}{filled.contour}} for a nice plot. ! Undefined control sequence. l.4517 \code{\LinkA {filled.contour}{filled.contour}} for a nice plot. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4518 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4520 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4521 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4525 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4526 \end{Examples} ! Undefined control sequence. l.4527 \HeaderA {warpbreaks}{The Number of Breaks in Yarn during Weaving}{war... ! Undefined control sequence. l.4528 \keyword {datasets}{warpbreaks} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4530 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4533 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4535 \begin{Usage} [449 [27]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4539 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4541 \begin{Format} ! Undefined control sequence. l.4544 \Tabular {rlll}{ ! Undefined control sequence. l.4545 \code {[,1]} & \code{breaks} & numeric & The number of breaks\\{} ! Misplaced alignment tab character &. l.4545 \code{[,1]} & \code{breaks} & numeric & The number of breaks\\{} ! Undefined control sequence. l.4545 \code{[,1]} & \code {breaks} & numeric & The number of breaks\\{} ! Misplaced alignment tab character &. l.4545 \code{[,1]} & \code{breaks} & numeric & The number of breaks\\{} ! Misplaced alignment tab character &. l.4545 \code{[,1]} & \code{breaks} & numeric & The number of breaks\\{} ! Undefined control sequence. l.4546 \code {[,2]} & \code{wool} & factor & The type of wool (A or B)\\{} ! Misplaced alignment tab character &. l.4546 \code{[,2]} & \code{wool} & factor & The type of wool (A or B)\\{} ! Undefined control sequence. l.4546 \code{[,2]} & \code {wool} & factor & The type of wool (A or B)\\{} ! Misplaced alignment tab character &. l.4546 \code{[,2]} & \code{wool} & factor & The type of wool (A or B)\\{} ! Misplaced alignment tab character &. l.4546 \code{[,2]} & \code{wool} & factor & The type of wool (A or B)\\{} ! Undefined control sequence. l.4547 \code {[,3]} & \code{tension} & factor & The level of tension (L, M, H) ! Misplaced alignment tab character &. l.4547 \code{[,3]} & \code{tension} & factor & The level of tension (L, M, H) ! Undefined control sequence. l.4547 \code{[,3]} & \code {tension} & factor & The level of tension (L, M, H) ! Misplaced alignment tab character &. l.4547 \code{[,3]} & \code{tension} & factor & The level of tension (L, M, H) ! Misplaced alignment tab character &. l.4547 \code{[,3]} & \code{tension} & factor & The level of tension (L, M, H) ! Undefined control sequence. l.4550 (\code {AL}, \code{AM}, \code{AH}, \code{BL}, \code{BM}, \code{BH}). ! Undefined control sequence. l.4550 (\code{AL}, \code {AM}, \code{AH}, \code{BL}, \code{BM}, \code{BH}). ! Undefined control sequence. l.4550 (\code{AL}, \code{AM}, \code {AH}, \code{BL}, \code{BM}, \code{BH}). ! Undefined control sequence. l.4550 (\code{AL}, \code{AM}, \code{AH}, \code {BL}, \code{BM}, \code{BH}). ! Undefined control sequence. l.4550 ..., \code{AM}, \code{AH}, \code{BL}, \code {BM}, \code{BH}). ! Undefined control sequence. l.4550 ..., \code{AH}, \code{BL}, \code{BM}, \code {BH}). ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4551 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4553 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4558 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4560 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4568 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4570 \begin{SeeAlso} \relax ! Undefined control sequence. l.4571 \code {\LinkA{xtabs}{xtabs}} for ways to display these data as a table. ! Undefined control sequence. l.4571 \code{\LinkA {xtabs}{xtabs}} for ways to display these data as a table. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4572 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4574 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4575 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4587 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4588 \end{Examples} ! Undefined control sequence. l.4589 \HeaderA {women}{Average Heights and Weights for American Women}{women} ! Undefined control sequence. l.4590 \keyword {datasets}{women} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4592 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4595 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... [28 l.4597 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4601 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4603 \begin{Format} ! Undefined control sequence. l.4606 \Tabular {rlll}{ ! Undefined control sequence. l.4607 \code {[,1]} & \code{height} & numeric & Height (in)\\{} ! Misplaced alignment tab character &. l.4607 \code{[,1]} & \code{height} & numeric & Height (in)\\{} ! Undefined control sequence. l.4607 \code{[,1]} & \code {height} & numeric & Height (in)\\{} ! Misplaced alignment tab character &. l.4607 \code{[,1]} & \code{height} & numeric & Height (in)\\{} ! Misplaced alignment tab character &. l.4607 \code{[,1]} & \code{height} & numeric & Height (in)\\{} ! Undefined control sequence. l.4608 \code {[,2]} & \code{weight} & numeric & Weight (lbs) ! Misplaced alignment tab character &. l.4608 \code{[,2]} & \code{weight} & numeric & Weight (lbs) ! Undefined control sequence. l.4608 \code{[,2]} & \code {weight} & numeric & Weight (lbs) ! Misplaced alignment tab character &. l.4608 \code{[,2]} & \code{weight} & numeric & Weight (lbs) ! Misplaced alignment tab character &. l.4608 \code{[,2]} & \code{weight} & numeric & Weight (lbs) ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4610 \end{Format} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4612 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4619 \end{Details} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4621 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4623 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4625 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4629 \end{References} ] ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4631 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4632 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4636 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4637 \end{Examples} ! Undefined control sequence. l.4638 \HeaderA {WorldPhones}{The World's Telephones}{WorldPhones} ! Undefined control sequence. l.4639 \keyword {datasets}{WorldPhones} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4641 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4644 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4646 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4650 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4652 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4660 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4662 \begin{Source} \relax ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4664 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4666 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4670 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4672 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4673 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4680 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4681 \end{Examples} ! Undefined control sequence. l.4682 \HeaderA {WWWusage}{Internet Usage per Minute}{WWWusage} ! Undefined control sequence. l.4683 \keyword {datasets}{WWWusage} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4685 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4688 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4690 \begin{Usage} [450 Chapter 7 [29]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4694 \end{Usage} ! LaTeX Error: Environment Format undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4696 \begin{Format} ! LaTeX Error: \begin{document} ended by \end{Format}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4698 \end{Format} ! LaTeX Error: Environment Source undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4700 \begin{Source} \relax ! Undefined control sequence. l.4703 \url {http://www.ssfpack.com/dkbook/} ! LaTeX Error: \begin{document} ended by \end{Source}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4704 \end{Source} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4706 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4709 \end{References} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4711 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4712 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.4716 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.4716 ## Not run: Underfull \hbox (badness 1783) in paragraph at lines 4697--4725 \OT1/cmr/m/n/10 Hyn-d-man, R. J. (1998) \OT1/cmr/m/it/10 Fore-cast-ing: Meth-od s and Ap-pli-ca-tions. \OT1/cmr/m/n/10 Wi- Underfull \hbox (badness 2644) in paragraph at lines 4697--4725 \OT1/cmr/m/n/10 5)\OML/cmm/m/it/10 aics\OT1/cmr/m/n/10 [1 + \OML/cmm/m/it/10 p; \OT1/cmr/m/n/10 1 + \OML/cmm/m/it/10 q\OT1/cmr/m/n/10 ] \OML/cmm/m/it/10 < \OM S/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 arima\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 WWWusa ge; c\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 p; \OT1/cmr/m/n/10 1\OML/cmm/m/it/10 ; q \OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; optim:control \OT1/cmr/m/n/10 = ! You can't use `macro parameter character #' in vertical mode. l.4726 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.4726 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4727 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.4728 \end{Examples} [451 [30]) (./grDevices-pkg.tex [452]] Chapter 4. ! Undefined control sequence. l.3 \HeaderA {grDevices-package}{The R Graphics Devices and Support for Colou... ! Undefined control sequence. l.4 \aliasA {grDevices}{grDevices-package}{grDevices} ! Undefined control sequence. l.5 \keyword {package}{grDevices-package} ! Undefined control sequence. l.6 \keyword {device}{grDevices-package} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.8 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.10 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.12 \begin{Details} \relax Underfull \hbox (badness 7468) in paragraph at lines 3--13 \OT1/cmr/m/n/10 grDevices-packageThe R Graph-ics De-vices and Sup-port for Colo urs Underfull \hbox (badness 10000) in paragraph at lines 3--13 \OT1/cmr/m/n/10 and Fonts-grDe-vices.Rdash.package grDevicesgrDevices-packagegr Devices Underfull \hbox (badness 6316) in paragraph at lines 3--13 \OT1/cmr/m/n/10 packagegrDevices-package devicegrDevices-package Graph-ics de-v ices and ! Undefined control sequence. l.15 \LinkA {base}{graphics.Rdash.package} and \LinkA{grid}{grid.Rdash.packag... ! Undefined control sequence. l.15 ...A{base}{graphics.Rdash.package} and \LinkA {grid}{grid.Rdash.package}... Underfull \hbox (badness 10000) in paragraph at lines 14--16 []\OT1/cmr/m/n/10 This pack-age con-tains func-tions which sup-port both base-g -raph- ! Undefined control sequence. l.17 For a complete list of functions, use \code {library(help = "grDevices")}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.19 \end{Details} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.21 \begin{Author} \relax ! Undefined control sequence. l.24 Maintainer: R Core Team \email {R-core@r-project.org} ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.25 \end{Author} ! Undefined control sequence. l.26 \HeaderA {adjustcolor}{Adjust Colors in One or More Directions Convenien... ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.28 \begin{Description} \relax ! Undefined control sequence. l.30 coordinates in \eqn {(r,g,b,\alpha)}{} space, typically by up or down ! Missing $ inserted. $ l.30 coordinates in \eqn{(r,g,b,\alpha )}{} space, typically by up or down ! Extra }, or forgotten $. l.30 coordinates in \eqn{(r,g,b,\alpha)} {} space, typically by up or down ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.32 \end{Description} ! Missing $ inserted. $ l.32 \end{Description} ! Missing } inserted. } l.32 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.34 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.40 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.42 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.43 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.44 \item[\code{col}] vector of colors, in any format that col2rgb() accepts ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.45 \item[\code{alpha.f}] factor modifying the opacity alpha; typically in ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.46 \item[\code{red.f, green.f, blue.f}] factors modifying the ``red-'', ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.48 \item[\code{offset}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.50 \item[\code{transform}] ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.52 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.53 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.55 \begin{Value} ! Undefined control sequence. l.56 a color vector of the same length as \code {col}, effectively the ! Undefined control sequence. l.57 result of \code {\LinkA{rgb}{rgb}()}. ! Undefined control sequence. l.57 result of \code{\LinkA {rgb}{rgb}()}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.58 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.60 \begin{SeeAlso} \relax ! Undefined control sequence. l.61 \code {\LinkA{rgb}{rgb}}, \code{\LinkA{col2rgb}{col2rgb}}. For more sop... ! Undefined control sequence. l.61 \code{\LinkA {rgb}{rgb}}, \code{\LinkA{col2rgb}{col2rgb}}. For more sop... ! Undefined control sequence. l.61 \code{\LinkA{rgb}{rgb}}, \code {\LinkA{col2rgb}{col2rgb}}. For more sop... ! Undefined control sequence. l.61 \code{\LinkA{rgb}{rgb}}, \code{\LinkA {col2rgb}{col2rgb}}. For more sop... ! Undefined control sequence. l.62 color constructions: \code {\LinkA{convertColor}{convertColor}} ! Undefined control sequence. l.62 color constructions: \code{\LinkA {convertColor}{convertColor}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.63 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.65 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.66 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.67 # # Illustrative examples : ! You can't use `macro parameter character #' in horizontal mode. l.67 ## Illustrative examples : Underfull \hbox (badness 1297) in paragraph at lines 56--72 \OT1/cmr/m/n/10 a color vec-tor of the same length as col, ef-fec-tively the re -sult of rg- Underfull \hbox (badness 4013) in paragraph at lines 56--72 \OT1/cmr/m/n/10 brgb(). rg-brgb, col2rgbcol2rgb. For more so-phis-ti-cated col or Underfull \hbox (badness 4819) in paragraph at lines 56--72 \OT1/cmr/m/n/10 con-struc-tions: con-vert-Col-or-con-vert-Color Il-lus-tra- tive ex-am-ples : Underfull \hbox (badness 1048) in paragraph at lines 56--72 \OT1/cmr/m/n/10 opal <- palette("default") stopifnot(identical(adjustcolor(1:8, 0.75), ad-just- ! You can't use `macro parameter character #' in vertical mode. l.73 # # alpha = 1/2 * previous alpha --> opaque colors ! You can't use `macro parameter character #' in vertical mode. l.73 ## alpha = 1/2 * previous alpha --> opaque colors Underfull \hbox (badness 10000) in paragraph at lines 73--75 []\OT1/cmr/m/n/10 alpha = 1/2 * pre-vi-ous al-pha --> opaque col-ors x <- ! You can't use `macro parameter character #' in horizontal mode. l.80 ...stcolor(x, offset = c(0.5, 0.5, 0.5, 0), # <- "more white" ! You can't use `macro parameter character #' in vertical mode. l.89 # # and ! You can't use `macro parameter character #' in vertical mode. l.89 ## and [453] [31 ! You can't use `macro parameter character #' in vertical mode. l.94 # # revert to previous palette: active ! You can't use `macro parameter character #' in vertical mode. l.94 ## revert to previous palette: active ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.96 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.97 \end{Examples} ! Undefined control sequence. l.98 \HeaderA {as.graphicsAnnot}{Coerce an Object for Graphics Annotation}{as... ! Undefined control sequence. l.99 \keyword {utilities}{as.graphicsAnnot} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.101 \begin{Description} \relax ! Undefined control sequence. l.102 Coerce an \R {} object into a form suitable for graphics annotation. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.103 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.105 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.109 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.111 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.112 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.113 \item[\code{x}] an \R{} object ! Undefined control sequence. l.113 \item[\code{x}] an \R {} object ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.114 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.115 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.117 \begin{Details} \relax ! Undefined control sequence. l.118 ...sions, calls and names (as used by \LinkA {plotmath}{plotmath}) are ... ! Undefined control sequence. l.120 determined by \code {\LinkA{is.object}{is.object}}) are coerced by ! Undefined control sequence. l.120 determined by \code{\LinkA {is.object}{is.object}}) are coerced by ! Undefined control sequence. l.121 \code {\LinkA{as.character}{as.character}} to character vectors. ! Undefined control sequence. l.121 \code{\LinkA {as.character}{as.character}} to character vectors. ! Undefined control sequence. l.123 All the \pkg {graphics} and \pkg{grid} functions which use this coerce ! Undefined control sequence. l.123 All the \pkg{graphics} and \pkg {grid} functions which use this coerce ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.125 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.127 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.129 \end{Value} ! Undefined control sequence. l.130 \HeaderA {as.raster}{Create a Raster Object}{as.raster} ! Undefined control sequence. l.131 \methaliasA {as.raster.array}{as.raster}{as.raster.array} ! Undefined control sequence. l.132 \methaliasA {as.raster.character}{as.raster}{as.raster.character} ! Undefined control sequence. l.133 \methaliasA {as.raster.logical}{as.raster}{as.raster.logical} ! Undefined control sequence. l.134 \methaliasA {as.raster.matrix}{as.raster}{as.raster.matrix} ! Undefined control sequence. l.135 \methaliasA {as.raster.numeric}{as.raster}{as.raster.numeric} ! Undefined control sequence. l.136 \methaliasA {as.raster.raw}{as.raster}{as.raster.raw} ! Undefined control sequence. l.137 \aliasA {is.raster}{as.raster}{is.raster} ! Undefined control sequence. l.138 \keyword {dplot}{as.raster} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.140 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.143 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.145 \begin{Usage} Overfull \hbox (25.55617pt too wide) in paragraph at lines 123--146 \OT1/cmr/m/n/10 as.raster.characteras.rasteras.raster.character as.raster.logic alas.rasteras.raster.logical Overfull \hbox (17.22289pt too wide) in paragraph at lines 123--146 \OT1/cmr/m/n/10 as.raster. Chapter 8 [32]matrixas.rasteras.raster.matrix as.raster.numericas.r asteras.raster.numeric ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.164 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.166 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.167 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.168 \item[\code{x}] any \R{} object. ! Undefined control sequence. l.168 \item[\code{x}] any \R {} object. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.169 \item[\code{max}] number giving the maximum of the color values range. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.170 \item[\code{...}] further arguments passed to or from other methods. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.171 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.172 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.174 \begin{Details} \relax ! Undefined control sequence. l.175 An object of class \code {"raster"} is a matrix of colour values as ! Undefined control sequence. l.176 given by \code {\LinkA{rgb}{rgb}} representing a bitmap image. ! Undefined control sequence. l.176 given by \code{\LinkA {rgb}{rgb}} representing a bitmap image. ! Undefined control sequence. l.180 make use of the \code {as.raster()} function to generate a raster ! Undefined control sequence. l.183 The \code {as.raster()} function is (S3) generic so methods can be ! Undefined control sequence. l.184 written to convert other \R {} objects to a raster object. [454] ! Undefined control sequence. l.193 \code {\LinkA{matrix}{matrix}} (of colour strings). ! Undefined control sequence. l.193 \code{\LinkA {matrix}{matrix}} (of colour strings). ! Undefined control sequence. l.198 There is a \code {\LinkA{is.na}{is.na}} method which returns a logical ... ! Undefined control sequence. l.198 There is a \code{\LinkA {is.na}{is.na}} method which returns a logical ... ! Undefined control sequence. l.199 ...ns as the raster object. Note that \code {NA} ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.202 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.204 \begin{Value} ! Undefined control sequence. l.205 For \code {as.raster()}, a raster object. ! Undefined control sequence. l.207 For \code {is.raster()}, a logical indicating whether ! Undefined control sequence. l.208 \code {x} is a raster object. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.209 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.211 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.216 \end{Note} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.218 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.219 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.220 # A red gradient ! You can't use `macro parameter character #' in vertical mode. l.224 # Vectors are 1-column matrices ... ! You can't use `macro parameter character #' in horizontal mode. l.225 # character vectors are color names ... ! You can't use `macro parameter character #' in horizontal mode. l.227 # numeric vectors are greyscale ... ! You can't use `macro parameter character #' in horizontal mode. l.229 # logical vectors are black and white ... ! You can't use `macro parameter character #' in vertical mode. l.232 # ... unless nrow/ncol are supplied ... ! You can't use `macro parameter character #' in vertical mode. l.235 # Matrix can also be logical or numeric (or raw) ... ! You can't use `macro parameter character #' in vertical mode. l.239 # An array can be 3-plane numeric (R, G, B planes) ... ! You can't use `macro parameter character #' in vertical mode. l.242 # ... or 4-plane numeric (R, G, B, A planes) ! You can't use `macro parameter character #' in vertical mode. l.245 # subsetting ! You can't use `macro parameter character #' in vertical mode. l.250 # assigning to subset ! You can't use `macro parameter character #' in vertical mode. l.253 # comparison ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.257 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.258 \end{Examples} ! Undefined control sequence. l.259 \HeaderA {axisTicks}{Compute Pretty Axis Tick Scales}{axisTicks} ! Undefined control sequence. l.260 \aliasA {.axisPars}{axisTicks}{.axisPars} ! Undefined control sequence. l.261 \keyword {dplot}{axisTicks} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.263 \begin{Description} \relax ! Undefined control sequence. l.265 traditional \R {} graphics do it. This is interesting particularly for ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.267 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.269 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.274 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.276 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.277 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.278 \item[\code{usr}] numeric vector of length 2, with \code{c(min, max)} ... ! Undefined control sequence. l.278 ...}] numeric vector of length 2, with \code {c(min, max)} axis ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.280 \item[\code{log}] logical indicating if a log scale is (thought to be) in ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.282 \item[\code{axp}] numeric vector of length 3, \code{c(mi, ma, n.)}, with ! Undefined control sequence. l.282 ...e{axp}] numeric vector of length 3, \code {c(mi, ma, n.)}, with ! Undefined control sequence. l.283 identical meaning to \code {\LinkA{par}{par}("?axp")} (where \code{?} is ! Undefined control sequence. l.283 identical meaning to \code{\LinkA {par}{par}("?axp")} (where \code{?} is ! Undefined control sequence. l.283 ...de{\LinkA{par}{par}("?axp")} (where \code {?} is ! Undefined control sequence. l.284 \code {x} or \code{y}), namely ``pretty'' axis extents, and an ! Undefined control sequence. l.284 \code{x} or \code {y}), namely ``pretty'' axis extents, and an ! Undefined control sequence. l.285 integer \emph{code} \code {n.}. Underfull \hbox (badness 1430) in paragraph at lines 282--286 []\OT1/cmr/m/n/10 numeric vec-tor of length 3, c(mi, ma, n.), with iden-ti-cal mean-ing to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.288 \item[\code{nint, nintLog}] positive integer value indicating ! Undefined control sequence. l.290 \code {nintLog} is used \bold{only} for the case \code{log = TRUE}. ! Undefined control sequence. l.290 \code{nintLog} is used \bold {only} for the case \code{log = TRUE}. ! Undefined control sequence. l.290 ...g} is used \bold{only} for the case \code {log = TRUE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.291 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.292 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.294 \begin{Details} \relax ! Undefined control sequence. l.295 \code {axisTicks(usr, *)} calls \code{.axisPars(usr, ..)} when ! Undefined control sequence. l.295 \code{axisTicks(usr, *)} calls \code {.axisPars(usr, ..)} when ! Undefined control sequence. l.296 \code {axp} is missing (or \code{NULL}). ! Undefined control sequence. l.296 \code{axp} is missing (or \code {NULL}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.298 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.300 \begin{Value} ! Undefined control sequence. l.301 \code {axisTicks()} returns a numeric vector of potential axis tick ! Undefined control sequence. l.302 locations, of length approx [33imately \code {nint+1}. ! Undefined control sequence. l.304 \code {.axisPars()} returns a \code{\LinkA{list}{list}} with components ! Undefined control sequence. l.304 \code{.axisPars()} returns a \code {\LinkA{list}{list}} with components ! Undefined control sequence. l.304 \code{.axisPars()} returns a \code{\LinkA {list}{list}} with components ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.305 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.306 \item[\code{axp}] numeric vector of length 2, \code{c(min., max.)}, of... ! Undefined control sequence. l.306 ...e{axp}] numeric vector of length 2, \code {c(min., max.)}, of pretty ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.308 \item[\code{n}] integer (code), with the same meaning as ! Undefined control sequence. l.309 \code {\LinkA{par}{par}("?axp")[3]}. ! Undefined control sequence. l.309 \code{\LinkA {par}{par}("?axp")[3]}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.310 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.311 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.313 \begin{SeeAlso} \relax ! Undefined control sequence. l.314 \code {\LinkA{axTicks}{axTicks}}; ! Undefined control sequence. l.314 \code{\LinkA {axTicks}{axTicks}}; ! Undefined control sequence. l.315 \code {\LinkA{axis}{axis}}, and \code{\LinkA{par}{par}} (from ! Undefined control sequence. l.315 \code{\LinkA {axis}{axis}}, and \code{\LinkA{par}{par}} (from ! Undefined control sequence. l.315 \code{\LinkA{axis}{axis}}, and \code {\LinkA{par}{par}} (from ! Undefined control sequence. l.315 \code{\LinkA{axis}{axis}}, and \code{\LinkA {par}{par}} (from ! Undefined control sequence. l.316 the \pkg {graphics} package). ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.317 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.319 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.320 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.321 # #--- Demonstrating correspondence between graphics' ! You can't use `macro parameter character #' in horizontal mode. l.321 ## --- Demonstrating correspondence between graphics' ! You can't use `macro parameter character #' in horizontal mode. l.322 # #--- axis() and the graphics-engine agnostic axisTicks() : ! You can't use `macro parameter character #' in horizontal mode. l.322 ## --- axis() and the graphics-engine agnostic axisTicks() : [455]] $ l.337 plot(2^ (0:9), log = "y"); (pu <- par("usr")) ! You can't use `macro parameter character #' in math mode. l.338 ...ya <- axisTicks(pu[3:4], log = TRUE))) # y axis ! Missing $ inserted. $ l.339 Underfull \hbox (badness 2961) in paragraph at lines 337--339 []\OT1/cmr/m/n/10 plot(2$[]0 : 9)\OML/cmm/m/it/10 ; log \OT1/cmr/m/n/10 = "\OML /cmm/m/it/10 y\OT1/cmr/m/n/10 "); (\OML/cmm/m/it/10 pu < \OMS/cmsy/m/n/10 ^^@\O ML/cmm/m/it/10 par\OT1/cmr/m/n/10 ("\OML/cmm/m/it/10 usr\OT1/cmr/m/n/10 "))\OML /cmm/m/it/10 aX\OT1/cmr/m/n/10 (2\OML/cmm/m/it/10 ; print\OT1/cmr/m/n/10 (\OML/ cmm/m/it/10 ya < ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.340 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.341 \end{Examples} ! Undefined control sequence. l.342 \HeaderA {boxplot.stats}{Box Plot Statistics}{boxplot.stats} ! Undefined control sequence. l.343 \keyword {dplot}{boxplot.stats} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.345 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.349 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.351 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.355 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.357 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.358 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.359 \item[\code{x}] a numeric vector for which the boxplot will ! Undefined control sequence. l.360 be constructed (\code {\LinkA{NA}{NA}}s and \code{\LinkA{NaN}{NaN}}s ar... ! Undefined control sequence. l.360 be constructed (\code{\LinkA {NA}{NA}}s and \code{\LinkA{NaN}{NaN}}s ar... ! Undefined control sequence. l.360 ...tructed (\code{\LinkA{NA}{NA}}s and \code {\LinkA{NaN}{NaN}}s are al... ! Undefined control sequence. l.360 ... (\code{\LinkA{NA}{NA}}s and \code{\LinkA {NaN}{NaN}}s are allowed ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.362 \item[\code{coef}] this determines how far the plot `whiskers' extend out ! Undefined control sequence. l.363 from the box. If \code {coef} is positive, the whiskers extend to the ! Undefined control sequence. l.364 ...me data point which is no more than \code {coef} times ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.368 \item[\code{do.conf, do.out}] logicals; if \code{FALSE}, the \code{con... ! Undefined control sequence. l.368 ...code{do.conf, do.out}] logicals; if \code {FALSE}, the \code{conf} or ! Undefined control sequence. l.368 ...ut}] logicals; if \code{FALSE}, the \code {conf} or ! Undefined control sequence. l.369 \code {out} component respectively will be empty in the result. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.370 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.371 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.373 \begin{Details} \relax ! Undefined control sequence. l.375 i.e., close to \code {\LinkA{quantile}{quantile}(x, c(1,3)/4)}. The hi... ! Undefined control sequence. l.375 i.e., close to \code{\LinkA {quantile}{quantile}(x, c(1,3)/4)}. The hi... ! Undefined control sequence. l.376 the quartiles for odd \eqn {n}{} (where \code{n <- length(x)}) and ! Undefined control sequence. l.376 the quartiles for odd \eqn{n}{} (where \code {n <- length(x)}) and ! Undefined control sequence. l.377 differ for even \eqn {n}{}. Whereas the quartiles only equal observations ! Undefined control sequence. l.378 for \code {n \%\% 4 == 1} (\eqn{n\equiv 1 \bmod 4}{}), ! Undefined control sequence. l.378 for \code{n \%\% 4 == 1} (\eqn {n\equiv 1 \bmod 4}{}), ! Missing $ inserted. $ l.378 for \code{n \%\% 4 == 1} (\eqn{n\equiv 1 \bmod 4}{}), ! Extra }, or forgotten $. l.378 ...e{n \%\% 4 == 1} (\eqn{n\equiv 1 \bmod 4} {}), ! Undefined control sequence. l.379 ...inges do so \emph{additionally} for \code {n \%\% 4 == 2} ! Undefined control sequence. l.380 (\eqn {n\equiv 2 \bmod 4}{}), and are in the middle of ! Missing $ inserted. $ l.382 Underfull \hbox (badness 1742) in paragraph at lines 368--382 \OT1/cmr/m/n/10 the quar-tiles only equal ob-ser-va-tions for n %% 4 == 1 (n$\O MS/cmsy/m/n/10 ^^Q \OT1/cmr/m/n/10 1 [] Overfull \hbox (133.30687pt too wide) in paragraph at lines 368--382 \OT1/cmr/m/n/10 4[])\OML/cmm/m/it/10 ; thehingesdoso[]for[]\OT1/cmr/m/n/10 ([][ ])\OML/cmm/m/it/10 ; andareinthemiddleoftwoobservationsotherwise:$ ! Undefined control sequence. l.383 The notches (if requested) extend to \code {+/-1.58 IQR/sqrt(n)}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.391 \end{Details} ! Missing } inserted. } l.391 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.393 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.395 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.396 \item[\code{stats}] a vector of length 5, containing the extreme of the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.399 \item[\code{n}] the number of non-\code{NA} observations in the sample. ! Undefined control sequence. l.399 \item[\code{n}] the number of non-\code {NA} observations in the sample. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.400 \item[\code{conf}] the lower and upper extremes of the `notch' ! Undefined control sequence. l.401 (\code {if(do.conf)}). See the details. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.402 \item[\code{out}] the values of any data points which lie beyond the ! Undefined control sequence. l.403 extremes of the whiskers (\code {if(do.out)}). ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.405 \end{ldescription} ! Undefined control sequence. l.406 Note that \code {\$stats} and \code{\$conf} are sorted in \emph{in}crea... ! Undefined control sequence. l.406 Note that \code{\$stats} and \code {\$conf} are sorted in \emph{in}crea... ! Undefined control sequence. l.407 order, unlike S, and that \code {\$n} and \code{\$out} include any ! Undefined control sequence. l.407 ..., unlike S, and that \code{\$n} and \code {\$out} include any ! Undefined control sequence. l.408 \code {+- Inf} values. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.409 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.411 \begin{References} \relax ! Undefined control sequence. l.415 ...s. \emph{The American Statistician} \bold {32}, 12--16. [456] ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.426 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.428 \begin{SeeAlso} \relax ! Undefined control sequence. l.429 \code {\LinkA{fivenum}{fivenum}}, \code{\LinkA{boxplot}{boxplot}}, \cod... ! Undefined control sequence. l.429 \code{\LinkA {fivenum}{fivenum}}, \code{\LinkA{boxplot}{boxplot}}, \cod... ! Undefined control sequence. l.429 \code{\LinkA{fivenum}{fivenum}}, \code {\LinkA{boxplot}{boxplot}}, \cod... ! Undefined control sequence. l.429 ...e{\LinkA{fivenum}{fivenum}}, \code{\LinkA {boxplot}{boxplot}}, \code... ! Undefined control sequence. l.429 ...}, \code{\LinkA{boxplot}{boxplot}}, \code {\LinkA{bxp}{bxp}}. ! Undefined control sequence. l.429 ...e{\LinkA{boxplot}{boxplot}}, \code{\LinkA {bxp}{bxp}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.430 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.432 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.433 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.438 stopifnot(b1 $ stats == b2 $ stats) # do.out = FALSE is still robust ! You can't use `macro parameter character #' in horizontal mode. l.440 # # no outlier treatment: ! You can't use `macro parameter character #' in horizontal mode. l.440 ## no outlier treatment: ! You can't use `macro parameter character #' in horizontal mode. l.443 boxplot.stats(c(x, NA)) # slight change : n is 101 ! Missing $ inserted. $ l.446 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.450 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.451 \end{Examples} ! Undefined control sequence. l.452 \HeaderA {cairo}{Cairographics-based SVG, PDF and PostScript Graphics D... ! Undefined control sequence. l.453 \aliasA {cairo\_pdf}{cairo}{cairo.Rul.pdf} ! Undefined control sequence. l.454 \aliasA {cairo\_ps}{cairo}{cairo.Rul.ps} ! Undefined control sequence. l.455 \aliasA {svg}{cairo}{svg} ! Undefined control sequence. l.456 \keyword {device}{cairo} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.458 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.461 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.463 \begin{Usage} Underfull \hbox (badness 1715) in paragraph at lines 452--464 \OT1/cmr/m/n/10 cairo[]pdfcairocairo.Rul.pdf cairo[]pscairocairo.Rul.ps svg-cai rosvg de-vice-cairo Overfull \hbox (6.74693pt too wide) in paragraph at lines 481--481 []\OT1/cmtt/m/n/10 cairo_pdf(filename = if(onefile) "Rplots.pdf" else "Rplot%03 d.pdf",[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.482 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.484 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.485 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.486 \item[\code{filename}] the name of the output file. ! Undefined control sequence. l.489 than \code {PATH\_MAX} characters long, and may be truncated if not. ! Undefined control sequence. l.490 See \code {\LinkA{postscript}{postscript}} for further details.) Tilde... ! Undefined control sequence. l.490 See \code{\LinkA {postscript}{postscript}} for further details.) Tilde... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.492 \item[\code{width}] the width of the device in inches. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.493 \item[\code{height}] the height of the device in inches. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.494 \item[\code{pointsize}] the default pointsize of plotted text (in big ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.495 \item[\code{onefile}] should all plots appear in one file or in separa... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.496 \item[\code{family}] one of the device-independent font families, ! Undefined control sequence. l.497 \code {"sans"}, \code{"serif"} and \code{"mono"}, or a character ! Undefined control sequence. l.497 \code{"sans"}, \code {"serif"} and \code{"mono"}, or a character ! Undefined control sequence. l.497 \code{"sans"}, \code{"serif"} and \code {"mono"}, or a character ! Undefined control sequence. l.500 ...airo fonts' section in the help for \code {\LinkA{X11}{X11}}. ! Undefined control sequence. l.500 ...nts' section in the help for \code{\LinkA {X11}{X11}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.502 \item[\code{bg}] the initial background colour: can be overridden by s... [457] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.504 \item[\code{antialias}] string, the type of anti-aliasing (if any) to ... ! Undefined control sequence. l.505 defaults to \code {"default"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.506 \item[\code{fallback\_resolution}] numeric: the resolution in dpi used... ! Undefined control sequence. l.507 falling back to bitmap output. Prior to \R {} 3.3.0 this depended on ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.509 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.510 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.512 \begin{Details} \relax ! Undefined control sequence. l.514 See \url {http://www.w3.org/Graphics/SVG/}. The output from \code{svg} ! Undefined control sequence. l.514 ...rg/Graphics/SVG/}. The output from \code {svg} ! Undefined control sequence. l.515 is SVG version 1.1 for \code {onefile = FALSE} (the default), otherwise ! Undefined control sequence. l.519 Note that unlike \code {\LinkA{postscript}{postscript}} and \code{\Link... ! Undefined control sequence. l.519 Note that unlike \code{\LinkA {postscript}{postscript}} and \code{\Link... ! Undefined control sequence. l.519 ...\LinkA{postscript}{postscript}} and \code {\LinkA{pdf}{pdf}}, ! Undefined control sequence. l.519 ...postscript}{postscript}} and \code{\LinkA {pdf}{pdf}}, ! Undefined control sequence. l.520 \code {cairo\_pdf} and \code{cairo\_ps} sometimes record \emph{bitmaps} ! Undefined control sequence. l.520 \code{cairo\_pdf} and \code {cairo\_ps} sometimes record \emph{bitmaps} ! Undefined control sequence. l.525 The output produced by \code {cairo\_ps(onefile = FALSE)} will be ! Undefined control sequence. l.528 \R {} can be compiled without support for any of these devices: this will ! Undefined control sequence. l.533 include something like \code {\%d} for the sequence number in ! Undefined control sequence. l.534 \code {file} (or set \code{onefile = TRUE}) the file will contain the ! Undefined control sequence. l.534 \code{file} (or set \code {onefile = TRUE}) the file will contain the ! Undefined control sequence. l.539 \code {cairo\_ps}). ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.540 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.542 \begin{Value} ! Undefined control sequence. l.543 ... is opened: nothing is returned to the \R {} interpreter. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.544 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.546 \begin{Section} {Anti-aliasing} ! Undefined control sequence. l.549 fills, e.g.~for \code {\LinkA{image}{image}} plots, and so is never use... ! Undefined control sequence. l.549 fills, e.g.~for \code{\LinkA {image}{image}} plots, and so is never use... ! Undefined control sequence. l.552 \code {antialias = "default"} is in principle platform-dependent, but ! Undefined control sequence. l.553 seems most often equivalent to \code {antialias = "gray"}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.554 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.556 \begin{Section} {Conventions} ! Undefined control sequence. l.562 ...e default device size is in pixels (\code {svg}) or inches. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.571 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.573 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.580 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.582 \begin{SeeAlso} \relax ! Undefined control sequence. l.583 \code {\LinkA{Devices}{Devices}}, \code{\LinkA{dev.print}{dev.print}}, ... ! Undefined control sequence. l.583 \code{\LinkA {Devices}{Devices}}, \code{\LinkA{dev.print}{dev.print}}, ... ! Undefined control sequence. l.583 \code{\LinkA{Devices}{Devices}}, \code {\LinkA{dev.print}{dev.print}}, ... ! Undefined control sequence. l.583 ...e{\LinkA{Devices}{Devices}}, \code{\LinkA {dev.print}{dev.print}}, \... ! Undefined control sequence. l.583 ...code{\LinkA{dev.print}{dev.print}}, \code {\LinkA{pdf}{pdf}}, ! Undefined control sequence. l.583 ...inkA{dev.print}{dev.print}}, \code{\LinkA {pdf}{pdf}}, ! Undefined control sequence. l.584 \code {\LinkA{postscript}{postscript}} ! Undefined control sequence. l.584 \code{\LinkA {postscript}{postscript}} ! Undefined control sequence. l.586 \code {\LinkA{capabilities}{capabilities}} to see if cairo is supported. ! Undefined control sequence. l.586 \code{\LinkA {capabilities}{capabilities}} to see if cairo is supported. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.587 \end{SeeAlso} ! Undefined control sequence. l.588 \HeaderA {check.options}{Set Options with Consistency Checks}{check.opt... ! Undefined control sequence. l.589 \keyword {utilities}{check.options} ! Undefined control sequence. l.590 \keyword {programming}{check.options} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.592 \begin{Description} \relax ! Undefined control sequence. l.594 The \code {\LinkA{attributes}{attributes}} of the new settings in \code... ! Undefined control sequence. l.594 The \code{\LinkA {attributes}{attributes}} of the new settings in \code... ! Undefined control sequence. l.594 ...attributes}} of the new settings in \code {new} are ! Undefined control sequence. l.596 list in \code {name.opt}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.597 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.599 \begin{Usage} [458] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.606 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.608 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.609 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.610 \item[\code{new}] a \emph{named} list ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.611 \item[\code{name.opt}] character with the name of \R{} object containi... ! Undefined control sequence. l.611 ...{name.opt}] character with the name of \R {} object containing the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.613 \item[\code{reset}] logical; if \code{TRUE}, reset the options from ! Undefined control sequence. l.613 \item[\code{reset}] logical; if \code {TRUE}, reset the options from ! Undefined control sequence. l.614 \code {name.opt}. If there is more than one \R{} object with name ! Undefined control sequence. l.614 ...{name.opt}. If there is more than one \R {} object with name ! Undefined control sequence. l.615 \code {name.opt}, remove the first one in the \code{\LinkA{search}{sear... ! Undefined control sequence. l.615 ...e.opt}, remove the first one in the \code {\LinkA{search}{search}()}... ! Undefined control sequence. l.615 ... remove the first one in the \code{\LinkA {search}{search}()} path. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.616 \item[\code{assign.opt}] logical; if \code{TRUE}, assign the \ldots ! Undefined control sequence. l.616 \item[\code{assign.opt}] logical; if \code {TRUE}, assign the \ldots ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.617 \item[\code{envir}] the \code{\LinkA{environment}{environment}} used f... ! Undefined control sequence. l.617 \item[\code{envir}] the \code {\LinkA{environment}{environment}} used f... ! Undefined control sequence. l.617 \item[\code{envir}] the \code{\LinkA {environment}{environment}} used f... ! Undefined control sequence. l.617 ...environment}{environment}} used for \code {\LinkA{get}{get}} ! Undefined control sequence. l.617 ...ment}{environment}} used for \code{\LinkA {get}{get}} ! Undefined control sequence. l.618 and \code {\LinkA{assign}{assign}}. ! Undefined control sequence. l.618 and \code{\LinkA {assign}{assign}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.619 \item[\code{check.attributes}] character containing the attributes which ! Undefined control sequence. l.620 \code {check.options} should check. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.621 \item[\code{override.check}] logical vector of length \code{length(new... ! Undefined control sequence. l.621 ...de.check}] logical vector of length \code {length(new)} (or 1 ! Undefined control sequence. l.623 For those \code {new[i]} where \code{override.check[i] == TRUE}, the ! Undefined control sequence. l.623 For those \code{new[i]} where \code {override.check[i] == TRUE}, the ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.625 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.626 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.628 \begin{Value} ! Undefined control sequence. l.630 \code {name.opt}. ! Undefined control sequence. l.631 ...the components are changed from the \code {new} list, ! Undefined control sequence. l.633 according to \code {override.check}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.634 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.636 \begin{Note} \relax ! Undefined control sequence. l.637 Option \code {"names"} is exempt from all the checks or warnings, as in ! Undefined control sequence. l.638 the application it can be \code {NULL} or a variable-length character ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.640 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.642 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.644 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.646 \begin{SeeAlso} \relax ! Undefined control sequence. l.647 \code {\LinkA{ps.options}{ps.options}} and \code{\LinkA{pdf.options}{pd... ! Undefined control sequence. l.647 \code{\LinkA {ps.options}{ps.options}} and \code{\LinkA{pdf.options}{pd... ! Undefined control sequence. l.647 ...\LinkA{ps.options}{ps.options}} and \code {\LinkA{pdf.options}{pdf.o... ! Undefined control sequence. l.647 ...ps.options}{ps.options}} and \code{\LinkA {pdf.options}{pdf.options}}, ! Undefined control sequence. l.648 which use \code {check.options}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.649 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.651 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.652 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.656 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.657 \end{Examples} ! Undefined control sequence. l.658 \HeaderA {chull}{Compute Convex Hull of a Set of Points}{chull} ! Undefined control sequence. l.659 \keyword {graphs}{chull} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.661 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.664 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.666 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.670 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.672 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.673 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.674 \item[\code{x, y}] coordinate vectors of points. This can be specified... ! Undefined control sequence. l.675 vectors \code {x} and \code{y}, a 2-column matrix \code{x}, a list ! Undefined control sequence. l.675 vectors \code{x} and \code {y}, a 2-column matrix \code{x}, a list ! Undefined control sequence. l.675 ...{x} and \code{y}, a 2-column matrix \code {x}, a list ! Undefined control sequence. l.676 \code {x} with two components, etc, see \code{\LinkA{xy.coords}{xy.coor... ! Undefined control sequence. l.676 \code{x} with two components, etc, see \code {\LinkA{xy.coords}{xy.coor... ! Undefined control sequence. l.676 ...ith two components, etc, see \code{\LinkA {xy.coords}{xy.coords}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.677 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.678 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.680 \begin{Details} \relax ! Undefined control sequence. l.681 \code {\LinkA{xy.coords}{xy.coords}} is used to interpret the specifica... ! Undefined control sequence. l.681 \code{\LinkA {xy.coords}{xy.coords}} is used to interpret the specifica... ! Undefined control sequence. l.682 points. Infinite, missing and \code {NaN} values are not allowed. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.685 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.687 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.691 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.693 \begin{References} \relax ! Undefined control sequence. l.699 ...sactions on Mathematical Software}, \bold {3}, 398--403. ! Undefined control sequence. l.703 Mathematical Software}, \bold {3}, 411--412. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.704 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.706 \begin{SeeAlso} \relax ! Undefined control sequence. l.707 \code {\LinkA{xy.coords}{xy.coords}}, \code{\LinkA{polygon}{polygon}} ! Undefined control sequence. l.707 \code{\LinkA {xy.coords}{xy.coords}}, \code{\LinkA{polygon}{polygon}} ! Undefined control sequence. l.707 \code{\LinkA{xy.coords}{xy.coords}}, \code {\LinkA{polygon}{polygon}} ! Undefined control sequence. l.707 ...inkA{xy.coords}{xy.coords}}, \code{\LinkA {polygon}{polygon}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.708 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.710 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.711 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.714 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.714 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.715 # Example usage from graphics package ! You can't use `macro parameter character #' in vertical mode. l.721 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.721 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.722 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.723 \end{Examples} ! Undefined control sequence. l.724 \HeaderA {cm}{Unit Transformation}{cm} ! Undefined control sequence. l.725 \keyword {dplot}{cm} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.727 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.729 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.731 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.735 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.737 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.738 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.739 \item[\code{x}] numeric vector ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.740 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.741 \end{Arguments} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.743 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.744 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.745 cm(1) # = 2.54 ! You can't use `macro parameter character #' in vertical mode. l.747 # # Translate *from* cm *to* inches: ! You can't use `macro parameter character #' in vertical mode. l.747 ## Translate *from* cm *to* inches: ! You can't use `macro parameter character #' in horizontal mode. l.749 10 / cm(1) # -> 10cm are 3.937 inches ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.750 \end{ExampleCode} ! LaTeX EThis is pdfTeXk, Version 3.1415926-1.40.9 (Web2C 7.5.7) file:line:error style messages enabled. %&-line parsing enabled. rror: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.751 \end{Examples} ! Undefined control sequence. l.752 \HeaderA {col2rgb}{Color to RGB Conversion}{col2rgb} ! Undefined control sequence. l.753 \keyword {color}{col2rgb} ! Undefined control sequence. l.754 \keyword {dplot}{col2rgb} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.756 \begin{Description} \relax ! Undefined control sequence. l.757 \R {} color to RGB (red/green/blue) conversion. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.758 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.760 \begin{Usage} [459] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.764 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.766 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.767 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.768 \item[\code{col}] vector of any of the three kinds of \R{} color speci... ! Undefined control sequence. l.768 ...}] vector of any of the three kinds of \R {} color specifications, ! Undefined control sequence. l.769 ..., either a color name (as listed by \code {\LinkA{colors}{colors}()}... ! Undefined control sequence. l.769 ...r a color name (as listed by \code{\LinkA {colors}{colors}()}), a ! Undefined control sequence. l.770 hexadecimal string of the form \code {"\#rrggbb"} or ! Undefined control sequence. l.771 \code {"\#rrggbbaa"} (see \code{\LinkA{rgb}{rgb}}), or a positive integer ! Undefined control sequence. l.771 \code{"\#rrggbbaa"} (see \code {\LinkA{rgb}{rgb}}), or a positive integer ! Undefined control sequence. l.771 \code{"\#rrggbbaa"} (see \code{\LinkA {rgb}{rgb}}), or a positive integer ! Undefined control sequence. l.772 \code {i} meaning \code{\LinkA{palette}{palette}()[i]}. ! Undefined control sequence. l.772 \code{i} meaning \code {\LinkA{palette}{palette}()[i]}. ! Undefined control sequence. l.772 \code{i} meaning \code{\LinkA {palette}{palette}()[i]}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.773 \item[\code{alpha}] logical value indicating whether the alpha channel... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.775 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.776 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.778 \begin{Details} \relax ! Undefined control sequence. l.779 \code {\LinkA{NA}{NA}} (as integer or character) and \code{"NA"} mean t... ! Undefined control sequence. l.779 \code{\LinkA {NA}{NA}} (as integer or character) and \code{"NA"} mean t... ! Undefined control sequence. l.779 ...{NA}} (as integer or character) and \code {"NA"} mean transparent. ! Undefined control sequence. l.781 Values of \code {col} not of one of these types are coerced: real ! Undefined control sequence. l.786 Zero and negative values of \code {col} are an error. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.787 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.789 \begin{Value} ! Undefined control sequence. l.790 ...eger matrix with three or four (for \code {alpha = TRUE}) rows ! Undefined control sequence. l.791 and number of columns the length of \code {col}. If \code{col} has ! Undefined control sequence. l.791 ...lumns the length of \code{col}. If \code {col} has ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.793 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.795 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.797 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.799 \begin{SeeAlso} \relax ! Undefined control sequence. l.800 \code {\LinkA{rgb}{rgb}}, \code{\LinkA{colors}{colors}}, \code{\LinkA{p... ! Undefined control sequence. l.800 \code{\LinkA {rgb}{rgb}}, \code{\LinkA{colors}{colors}}, \code{\LinkA{p... ! Undefined control sequence. l.800 \code{\LinkA{rgb}{rgb}}, \code {\LinkA{colors}{colors}}, \code{\LinkA{p... ! Undefined control sequence. l.800 \code{\LinkA{rgb}{rgb}}, \code{\LinkA {colors}{colors}}, \code{\LinkA{p... ! Undefined control sequence. l.800 ...b}}, \code{\LinkA{colors}{colors}}, \code {\LinkA{palette}{palette}}... ! Undefined control sequence. l.800 ...ode{\LinkA{colors}{colors}}, \code{\LinkA {palette}{palette}}, etc. ! Undefined control sequence. l.802 The newer, more flexible interface, \code {\LinkA{convertColor}{convert... ! Undefined control sequence. l.802 ...er, more flexible interface, \code{\LinkA {convertColor}{convertColo... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.803 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.805 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.806 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.808 ...lu = "royalblue", reddish = "tomato")) # note: colnames Underfull \hbox (badness 10000) in paragraph at lines 802--809 []\OT1/cmr/m/n/10 The newer, more flex-i-ble in-ter-face, con-vert-Col-or-con-v ert-Color(). Underfull \hbox (badness 1748) in paragraph at lines 802--809 \OT1/cmr/m/n/10 col2rgb("peachpuff") col2rgb(c(blu = "roy-al-blue", red-dish = "tomato")) ! You can't use `macro parameter character #' in horizontal mode. l.810 col2rgb(1:8) # the ones from the palette() (if the default) ! You can't use `macro parameter character #' in horizontal mode. l.814 col2rgb("# 08a0ff") ! You can't use `macro parameter character #' in horizontal mode. l.815 # # all three kinds of color specifications: ! You can't use `macro parameter character #' in horizontal mode. l.815 ## all three kinds of color specifications: ! You can't use `macro parameter character #' in horizontal mode. l.816 col2rgb(c(red = "red", hex = "# abcdef")) ! You can't use `macro parameter character #' in vertical mode. l.819 # #-- NON-INTRODUCTORY examples -- ! You can't use `macro parameter character #' in vertical mode. l.819 ## -- NON-INTRODUCTORY examples -- ! You can't use `macro parameter character #' in horizontal mode. l.822 table(print(diff(grC["red",]))) # '2' or '3': almost equidistant ! You can't use `macro parameter character #' in horizontal mode. l.823 # # The 'named' grays are in between {"slate gray" is not gray, strictly} ! You can't use `macro parameter character #' in horizontal mode. l.823 ## The 'named' grays are in between {"slate gray" is not gray, strictly} ! You can't use `macro parameter character #' in horizontal mode. l.830 t(crgb) # The whole table ! Missing $ inserted. $ l.832 ccodes <- c(256^ (2:0) %*% crgb) # = internal codes ! You can't use `macro parameter character #' in math mode. l.833 # # How many names are 'aliases' of each other: ! You can't use `macro parameter character #' in math mode. l.833 ## How many names are 'aliases' of each other: ! You can't use `macro parameter character #' in math mode. l.835 length(uc <- unique(sort(ccodes))) # 502 ! You can't use `macro parameter character #' in math mode. l.836 # # All the multiply named colors: ! You can't use `macro parameter character #' in math mode. l.836 ## All the multiply named colors: ! You can't use `macro parameter character #' in math mode. l.842 # # Not run: ! You can't use `macro parameter character #' in math mode. l.842 ## Not run: ! You can't use `macro parameter character #' in math mode. l.843 if(require(xgobi)) { # # Look at the color cube dynamically : ! You can't use `macro parameter character #' in math mode. l.843 if(require(xgobi)) { ## Look at the color cube dynamically : ! Misplaced alignment tab character &. l.845 table(is.gray <- tc[,1] == tc[,2] & tc[,2] == tc[,3]) # (397, 105) ! You can't use `macro parameter character #' in math mode. l.845 ...- tc[,1] == tc[,2] & tc[,2] == tc[,3]) # (397, 105) ! Missing $ inserted. $ l.848 Overfull \hbox (25.98947pt too wide) in paragraph at lines 832--848 \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 table\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 cco des\OT1/cmr/m/n/10 ))\OML/cmm/m/it/10 length\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 u c < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 unique\OT1/cmr/m/n/10 (\OML/cmm/m/it/1 0 sort\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 ccodes\OT1/cmr/m/n/10 )))502\OML/cmm/m/ it/10 Allthemultiplynamedcolors \OT1/cmr/m/n/10 : Underfull \hbox (badness 1603) in paragraph at lines 832--848 \OML/cmm/m/it/10 mult < \OMS/cmsy/m/n/10 ^^@\OML/cmm/m/it/10 uc\OT1/cmr/m/n/10 [\OML/cmm/m/it/10 tcc >\OT1/cmr/m/n/10 = 2]\OML/cmm/m/it/10 cl < \OMS/cmsy/m/n/ 10 ^^@\OML/cmm/m/it/10 lapply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 mult; function\O T1/cmr/m/n/10 (\OML/cmm/m/it/10 m\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 cc\OT1/cmr/m /n/10 [\OML/cmm/m/it/10 ccodes \OT1/cmr/m/n/10 == Overfull \hbox (72.14455pt too wide) in paragraph at lines 832--848 \OML/cmm/m/it/10 m\OT1/cmr/m/n/10 ])\OML/cmm/m/it/10 names\OT1/cmr/m/n/10 (\OML /cmm/m/it/10 cl\OT1/cmr/m/n/10 ) \OML/cmm/m/it/10 < \OMS/cmsy/m/n/10 ^^@\OML/cm m/m/it/10 apply\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 col\OT1/cmr/m/n/10 2\OML/cmm/m /it/10 rgb\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 sapply\OT1/cmr/m/n/10 (\OML/cmm/m/i t/10 cl; function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 x\OT1/cmr/m/n/10 )\OML/cmm/m /it/10 x\OT1/cmr/m/n/10 [1]))\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 2\OML/cmm/m/it/ 10 ; function\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n\OT1/cmr/m/n/10 )\OML/cmm/m/it/ 10 paste\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 n; collapse \OT1/cmr/m/n/10 = Overfull \hbox (629.74867pt too wide) in paragraph at lines 832--848 \OT1/cmr/m/n/10 "\OML/cmm/m/it/10 ; \OT1/cmr/m/n/10 "))\OML/cmm/m/it/10 utils \ OT1/cmr/m/n/10 :: \OML/cmm/m/it/10 str\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 cl\OT1/ cmr/m/n/10 )\OML/cmm/m/it/10 Notrun \OT1/cmr/m/n/10 : \OML/cmm/m/it/10 if\OT1/c mr/m/n/10 (\OML/cmm/m/it/10 require\OT1/cmr/m/n/10 (\OML/cmm/m/it/10 xgobi\OT1/ cmr/m/n/10 ))[]$ ! You can't use `macro parameter character #' in vertical mode. l.849 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.849 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.850 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.851 \end{Examples} ! Undefined control sequence. l.852 \HeaderA {colorRamp}{Color interpolation}{colorRamp} ! Undefined control sequence. l.853 \aliasA {colorRampPalette}{colorRamp}{colorRampPalette} ! Undefined control sequence. l.854 \keyword {color}{colorRamp} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.856 \begin{Description} \relax ! Undefined control sequence. l.858 ... to create new color palettes (like \code {\LinkA{topo.colors}{topo.... ! Undefined control sequence. l.858 ...ate new color palettes (like \code{\LinkA {topo.colors}{topo.colors}... ! Undefined control sequence. l.859 ...mps, functions that map the interval \eqn {[0, 1]}{} to colors ! Undefined control sequence. l.860 (like \code {\LinkA{grey}{grey}}). ! Undefined control sequence. l.860 (like \code{\LinkA {grey}{grey}}). ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.861 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.863 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.869 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.871 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.872 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.873 \item[\code{colors}] colors to interpolate; must be a valid argument to ! Undefined control sequence. l.874 \code {\LinkA{col2rgb}{col2rgb}()}. ! Undefined control sequence. l.874 \code{\LinkA {col2rgb}{col2rgb}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.875 \item[\code{bias}] a positive number. Higher values give more widely ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.877 \item[\code{space}] a character string; interpolation in RGB or CIE Lab [460] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.879 \item[\code{interpolate}] use spline or linear interpolation. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.880 \item[\code{alpha}] logical: should alpha channel (opacity) values be ! Undefined control sequence. l.882 \code {space} is specified. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.883 \item[\code{...}] arguments to pass to \code{colorRamp}. ! Undefined control sequence. l.883 \item[\code{...}] arguments to pass to \code {colorRamp}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.884 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.885 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.887 \begin{Details} \relax ! Undefined control sequence. l.895 ...s in Lab space. Future changes in the \R {} color model may change ! Undefined control sequence. l.896 the colors produced with \code {space = "Lab"}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.897 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.899 \begin{Value} ! Undefined control sequence. l.900 \code {colorRamp} returns a \code{\LinkA{function}{function}} with argu... ! Undefined control sequence. l.900 \code{colorRamp} returns a \code {\LinkA{function}{function}} with argu... ! Undefined control sequence. l.900 \code{colorRamp} returns a \code{\LinkA {function}{function}} with argu... ! Undefined control sequence. l.904 \code {colorRampPalette} returns a function that takes an integer ! Undefined control sequence. l.906 vector of colors (see \code {\LinkA{rgb}{rgb}}) interpolating the given... ! Undefined control sequence. l.906 vector of colors (see \code{\LinkA {rgb}{rgb}}) interpolating the given... ! Undefined control sequence. l.907 (similar to \code {\LinkA{heat.colors}{heat.colors}} or \code{\LinkA{te... ! Undefined control sequence. l.907 (similar to \code{\LinkA {heat.colors}{heat.colors}} or \code{\LinkA{te... ! Undefined control sequence. l.907 ...LinkA{heat.colors}{heat.colors}} or \code {\LinkA{terrain.colors}{te... ! Undefined control sequence. l.907 ...eat.colors}{heat.colors}} or \code{\LinkA {terrain.colors}{terrain.c... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.908 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.910 \begin{SeeAlso} \relax ! Undefined control sequence. l.913 \Rhref {https://CRAN.R-project.org/package=RColorBrewer}{\pkg{RColorBre... ! Undefined control sequence. l.913 ....R-project.org/package=RColorBrewer}{\pkg {RColorBrewer}} package. ! Undefined control sequence. l.915 \code {\LinkA{splinefun}{splinefun}} or \code{\LinkA{approxfun}{approxf... ! Undefined control sequence. l.915 \code{\LinkA {splinefun}{splinefun}} or \code{\LinkA{approxfun}{approxf... ! Undefined control sequence. l.915 \code{\LinkA{splinefun}{splinefun}} or \code {\LinkA{approxfun}{approxf... ! Undefined control sequence. l.915 ...kA{splinefun}{splinefun}} or \code{\LinkA {approxfun}{approxfun}} ar... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.917 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.919 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.920 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.921 # # Both return a *function* : ! You can't use `macro parameter character #' in horizontal mode. l.921 ## Both return a *function* : ! You can't use `macro parameter character #' in horizontal mode. l.922 colorRamp(c("red", "green"))( (0:4)/4 ) # # (x) , x in [0,1] ! You can't use `macro parameter character #' in horizontal mode. l.922 colorRamp(c("red", "green"))( (0:4)/4 ) ## (x) , x in [0,1] ! You can't use `macro parameter character #' in horizontal mode. l.923 colorRampPalette(c("blue", "red"))( 4 ) # # (n) ! You can't use `macro parameter character #' in horizontal mode. l.923 colorRampPalette(c("blue", "red"))( 4 ) ## (n) ! You can't use `macro parameter character #' in horizontal mode. l.924 # # a ramp in opacity of blue values ! You can't use `macro parameter character #' in horizontal mode. l.924 ## a ramp in opacity of blue values Underfull \hbox (badness 2828) in paragraph at lines 915--926 []\OT1/cmr/m/n/10 splinefunsplinefun or ap-prox-fu-nap-prox-fun are used for in -ter-po-la-tion. ! You can't use `macro parameter character #' in ventering extended mode (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.t2d/pdf/xtr/R-exts.texiertical mode. l.929 # # Here space="rgb" gives palettes that vary only in saturation, ! You can't use `macro parameter character #' in vertical mode. l.929 ## Here space="rgb" gives palettes that vary only in saturation, ! You can't use `macro parameter character #' in horizontal mode. l.930 # # as intended. ! You can't use `macro parameter character #' in horizontal mode. l.930 ## as intended. ! You can't use `macro parameter character #' in horizontal mode. l.931 # # With space="Lab" the steps are more uniform, but the hues ! You can't use `macro parameter character #' in horizontal mode. l.931 ## With space="Lab" the steps are more uniform, but the hues ! You can't use `macro parameter character #' in horizontal mode. l.932 # # are slightly purple. ! You can't use `macro parameter character #' in horizontal mode. l.932 ## are slightly purple. Underfull \hbox (badness 1308) in paragraph at lines 929--942 \OT1/cmr/m/n/10 pur-ple. filled.contour(volcano, color.palette = col-or-Ramp-Pa lette(c("red", ! You can't use `macro parameter character #' in vertical mode. l.943 # # Interpolating a 'sequential' ColorBrewer palette ! You can't use `macro parameter character #' in vertical mode. l.943 ## Interpolating a 'sequential' ColorBrewer palette ! You can't use `macro parameter character #' in horizontal mode. l.944 YlOrBr <- c("# FFFFD4", "#FED98E", "#FE9929", "#D95F0E", "#993404") ! You can't use `macro parameter character #' in horizontal mode. l.944 YlOrBr <- c("#FFFFD4", "# FED98E", "#FE9929", "#D95F0E", "#993404") ! You can't use `macro parameter character #' in horizontal mode. l.944 YlOrBr <- c("#FFFFD4", "#FED98E", "# FE9929", "#D95F0E", "#993404") ! You can't use `macro parameter character #' in horizontal mode. l.944 ... <- c("#FFFFD4", "#FED98E", "#FE9929", "# D95F0E", "#993404") ! You can't use `macro parameter character #' in horizontal mode. l.944 ...FD4", "#FED98E", "#FE9929", "#D95F0E", "# 993404") Underfull \hbox (badness 10000) in paragraph at lines 943--952 \OT1/cmr/m/n/10 "FED98E", "FE9929", "D95F0E", "993404") filled.contour(volcano, Underfull \hbox (badness 2753) in paragraph at lines 943--952 \OT1/cmr/m/n/10 color.palette = col-or-Ramp-Palette(YlOrBr, space = "Lab"), asp = 1) Underfull \hbox (badness 1210) in paragraph at lines 943--952 \OT1/cmr/m/n/10 filled.contour(volcano, color.palette = col-or-Ramp-Palette(YlO rBr, space = ! You can't use `macro parameter character #' in vertical mode. l.953 # # 'jet.colors' is "as in Matlab" ! You can't use `macro parameter character #' in vertical mode. l.953 ## 'jet.colors' is "as in Matlab" ! You can't use `macro parameter character #' in horizontal mode. l.954 # # (and hurting the eyes by over-saturation) ! You can't use `macro parameter character #' in horizontal mode. l.954 ## (and hurting the eyes by over-saturation) ! You can't use `macro parameter character #' in horizontal mode. l.956 colorRampPalette(c("# 00007F", "blue", "#007FFF", "cyan", ! You can't use `macro parameter character #' in horizontal mode. l.956 colorRampPalette(c("#00007F", "blue", "# 007FFF", "cyan", ! You can't use `macro parameter character #' in horizontal mode. l.957 "# 7FFF7F", "yellow", "#FF7F00", "red", "#7F0000")) ! You can't use `macro parameter character #' in horizontal mode. l.957 "#7FFF7F", "yellow", "# FF7F00", "red", "#7F0000")) ! You can't use `macro parameter character #' in horizontal mode. l.957 ..."#7FFF7F", "yellow", "#FF7F00", "red", "# 7F0000")) Underfull \hbox (badness 5667) in paragraph at lines 953--959 \OT (/usr/share/texmf-dist/tex/texinfo/texinfo.tex Loading texinfo [version 2008-04-18.10]:1/cmr/m/n/10 jet.colors <- col-or-Ramp-Palette(c("00007F", "blue", "007FFF", "cyan", ! You can't use `macro parameter character #' in vertical mode. l.960 # # space="Lab" helps when colors don't form a natural sequence ! You can't use `macro parameter character #' in vertical mode. l.960 ## space="Lab" helps when colors don't form a natural sequence ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.968 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.969 \end{Examples} ! Undefined control sequence. l.970 \HeaderA {colors}{Color Names}{colors} ! Undefined control sequence. l.971 \aliasA {colours}{colors}{colours} ! Undefined control sequence. l.972 \keyword {color}{colors} ! Undefined control sequence. l.973 \keyword {dplot}{colors} ! Undefined control sequence. l.974 \keyword {sysdata}{colors} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.976 \begin{Description} \relax ! Undefined control sequence. l.977 Returns the built-in color names which \R {} knows about. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.978 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.980 \begin{Usage} Underfull \hbox (badness 2818) in paragraph at lines 960--981 []\OT1/cmr/m/n/10 space="Lab" helps when col-ors don't form a nat-u-ral se-quen ce m Underfull \hbox (badness 1199) in paragraph at lines 960--981 \OT1/cmr/m/n/10 <- outer(1:20,1:20,function(x,y) sin(sqrt(x*y)/3)) rgb.palette <- col-or-Ramp- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.985 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.987 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.988 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.989 \item[\code{distinct}] logical indicating if the colors returned shoul... ! Undefined control sequence. l.990 distinct; e.g., \code {"snow"} and \code{"snow1"} are effectively the ! Undefined control sequence. l.990 distinct; e.g., \code{"snow"} and \code {"snow1"} are effectively the ! Undefined control sequence. l.991 same point in the \eqn {(0:255)^3}{} RGB space. ! Missing $ inserted. $ l.991 same point in the \eqn{(0:255)^ 3}{} RGB space. ! Extra }, or forgotten $. l.991 same point in the \eqn{(0:255)^3} {} RGB space. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.992 \end{ldescription} ! Missing $ inserted. $ l.992 \end{ldescription} ! Missing } inserted. } l.992 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.993 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.995 \begin{Details} \relax ! Undefined control sequence. l.996 These color names can be used with a \code {col=} specification in [461 pdf, fonts,] ! Undefined control sequence. l.1000 \code {rgb}, \code{hsv} and \code{hcl}, or the derived \code{rainbow}, ! Undefined control sequence. l.1000 \code{rgb}, \code {hsv} and \code{hcl}, or the derived \code{rainbow}, ! Undefined control sequence. l.1000 \code{rgb}, \code{hsv} and \code {hcl}, or the derived \code{rainbow}, ! Undefined control sequence. l.1000 ...sv} and \code{hcl}, or the derived \code {rainbow}, ! Undefined control sequence. l.1001 \code {heat.colors}, etc. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1002 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1004 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1006 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1008 \begin{SeeAlso} \relax ! Undefined control sequence. l.1009 \code {\LinkA{palette}{palette}} for setting the `palette' of colors for ! Undefined control sequence. l.1009 \code{\LinkA {palette}{palette}} for setting the `palette' of colors for ! Undefined control sequence. l.1010 \code {par(col=}\emph{}\code{)}; ! Undefined control sequence. \code l.1010 \code{par(col=}\emph{}\code {)}; ! Undefined control sequence. l.1011 \code {\LinkA{rgb}{rgb}}, \code{\LinkA{hsv}{hsv}}, \code{\LinkA{hcl}{h... ! Undefined control sequence. l.1011 \code{\LinkA {rgb}{rgb}}, \code{\LinkA{hsv}{hsv}}, \code{\LinkA{hcl}{h... ! Undefined control sequence. l.1011 \code{\LinkA{rgb}{rgb}}, \code {\LinkA{hsv}{hsv}}, \code{\LinkA{hcl}{h... ! Undefined control sequence. l.1011 \code{\LinkA{rgb}{rgb}}, \code{\LinkA {hsv}{hsv}}, \code{\LinkA{hcl}{h... ! Undefined control sequence. l.1011 ...b}{rgb}}, \code{\LinkA{hsv}{hsv}}, \code {\LinkA{hcl}{hcl}}, \code{... ! Undefined control sequence. l.1011 ...}, \code{\LinkA{hsv}{hsv}}, \code{\LinkA {hcl}{hcl}}, \code{\LinkA{... ! Undefined control sequence. l.1011 ...v}{hsv}}, \code{\LinkA{hcl}{hcl}}, \code {\LinkA{gray}{gray}}; ! Undefined control sequence. l.1011 ...}, \code{\LinkA{hcl}{hcl}}, \code{\LinkA {gray}{gray}}; ! Undefined control sequence. l.1012 \code {\LinkA{rainbow}{rainbow}} for a nice example; ! Undefined control sequence. l.1012 \code{\LinkA {rainbow}{rainbow}} for a nice example; ! Undefined control sequence. l.1013 and \code {\LinkA{heat.colors}{heat.colors}}, \code{\LinkA{topo.colors... ! Undefined control sequence. l.1013 and \code{\LinkA {heat.colors}{heat.colors}}, \code{\LinkA{topo.colors... ! Undefined control sequence. l.1013 ...\LinkA{heat.colors}{heat.colors}}, \code {\LinkA{topo.colors}{topo.... ! Undefined control sequence. l.1013 ...heat.colors}{heat.colors}}, \code{\LinkA {topo.colors}{topo.colors}... ! Undefined control sequence. l.1015 \code {\LinkA{col2rgb}{col2rgb}} for translating to RGB numbers and ex... ! Undefined control sequence. l.1015 \code{\LinkA {col2rgb}{col2rgb}} for translating to RGB numbers and ex... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1017 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1019 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1020 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1025 # # only 502 of the 657 named ones ! You can't use `macro parameter character #' in horizontal mode. l.1025 ## only 502 of the 657 named ones ! You can't use `macro parameter character #' in vertical mode. l.1027 # # ----------- Show all named colors and more: ! You can't use `macro parameter character #' in vertical mode. l.1027 ## ----------- Show all named colors and more: ! You can't use `macro parameter character #' in horizontal mode. l.1029 # # ----------- ! You can't use `macro parameter character #' in horizontal mode. l.1029 ## ----------- ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1030 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1031 \end{Examples} ! Undefined control sequence. l.1032 \HeaderA {contourLines}{Calculate Contour Lines}{contourLines} ! Undefined control sequence. l.1033 \keyword {dplot}{contourLines} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1035 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1037 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1039 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1046 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1048 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1049 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1050 \item[\code{x, y}] locations of grid lines at which the values in \co... ! Undefined control sequence. l.1050 ... grid lines at which the values in \code {z} are ! Undefined control sequence. l.1052 ...d values from 0 to 1 are used. If \code {x} is a \code{list}, ! Undefined control sequence. l.1052 ...0 to 1 are used. If \code{x} is a \code {list}, ! Undefined control sequence. l.1053 its components \code {x\$x} and \code{x\$y} are used for \code{x} ! Undefined control sequence. l.1053 its components \code{x\$x} and \code {x\$y} are used for \code{x} ! Undefined control sequence. l.1053 ...x\$x} and \code{x\$y} are used for \code {x} ! Undefined control sequence. l.1054 and \code {y}, respectively. If the list has component \code{z} this ! Undefined control sequence. l.1054 ...ctively. If the list has component \code {z} this ! Undefined control sequence. l.1055 is used for \code {z}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1056 \item[\code{z}] a matrix containing the values to be plotted (\code{N... ! Undefined control sequence. l.1056 ...ntaining the values to be plotted (\code {NA}s are ! Undefined control sequence. l.1057 allowed). Note that \code {x} can be used instead of \code{z} for ! Undefined control sequence. l.1057 ...at \code{x} can be used instead of \code {z} for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1059 \item[\code{nlevels}] number of contour levels desired \bold{iff} ! Undefined control sequence. l.1059 ...] number of contour levels desired \bold {iff} ! Undefined control sequence. l.1060 \code {levels} is not supplied. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1061 \item[\code{levels}] numeric vector of levels at which to draw contour ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1063 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1064 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1066 \begin{Details} \relax ! Undefined control sequence. l.1067 \code {contourLines} draws nothing, but returns a set of contour lines. ! Undefined control sequence. l.1070 The source code is in \file {\var{\LinkA{R\_HOME}{R.Rul.HOME}}/src/mai... ! Undefined control sequence. l.1070 The source code is in \file{\var {\LinkA{R\_HOME}{R.Rul.HOME}}/src/mai... ! Undefined control sequence. l.1070 The source code is in \file{\var{\LinkA {R\_HOME}{R.Rul.HOME}}/src/mai... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1071 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1073 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1076 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1077 \item[\code{level }] The contour level. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1078 \item[\code{x }] The x-coordinates of the contour. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1079 \item[\code{y }] The y-coordinates of the contour. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1080 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1081 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1083 \begin{SeeAlso} \relax ! Undefined control sequence. l.1084 \code {\LinkA{options}{options}("max.contour.segments")} for the maximal ! Undefined control sequence. l.1084 \code{\LinkA {options}{options}("max.contour.segments")} for the maximal ! Undefined control sequence. l.1087 \code {\LinkA{contour}{contour}}. ! Undefined control sequence. l.1087 \code{\LinkA {contour}{contour}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1088 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1090 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1091 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1095 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1096 \end{Examples} ! Undefined control sequence. l.1097 \HeaderA {convertColor}{Convert between Colour Spaces}{convertColor} ! Undefined control sequence. l.1098 \aliasA {colorspaces}{convertColor}{colorspaces} ! Undefined control sequence. l.1099 \keyword {color}{convertColor} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1101 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1104 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1106 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1111 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1113 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1114 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1115 \item[\code{color}] A matrix whose rows specify colors. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1116 \item[\code{from, to}] Input and output color spaces. See `Details' ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1117 \item[\code{from.ref.white, to.ref.white}] Reference whites or \code{... ! Undefined control sequence. l.1117 ...to.ref.white}] Reference whites or \code {NULL} ! Undefined control sequence. l.1119 spaces. \code {D65} is the default, see `Details' for others. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1121 \item[\code{scale.in, scale.out}] Input is divided by \code{scale.in}... ! Undefined control sequence. l.1121 ...n, scale.out}] Input is divided by \code {scale.in}, output ! Undefined control sequence. l.1122 is multiplied by \code {scale.out}. Use \code{NULL} to suppress ! Undefined control sequence. l.1122 ...ultiplied by \code{scale.out}. Use \code {NULL} to suppress ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1124 \item[\code{clip}] If \code{TRUE}, truncate RGB output to [0,1], ! Undefined control sequence. l.1124 \item[\code{clip}] If \code {TRUE}, truncate RGB output to [0,1], ! Undefined control sequence. l.1125 \code {FALSE} return out-of-range RGB, \code{NA} set out of range ! Undefined control sequence. l.1125 \code{FALSE} return out-of-range RGB, \code {NA} set out of range ! Undefined control sequence. l.1126 colors to \code {NaN}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1127 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1128 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1130 \begin{Details} \relax ! Undefined control sequence. l.1131 ... are specified by objects of class \code {colorConverter}, ! Undefined control sequence. l.1132 created by \code {\LinkA{colorConverter}{colorConverter}} or \code{\Li... ! Undefined control sequence. l.1132 created by \code{\LinkA {colorConverter}{colorConverter}} or \code{\Li... ! Undefined control sequence. l.1132 ...olorConverter}{colorConverter}} or \code {\LinkA{make.rgb}{make.rgb}}. ! Undefined control sequence. l.1132 ...verter}{colorConverter}} or \code{\LinkA {make.rgb}{make.rgb}}. ! Undefined control sequence. l.1133 ...aces may be referenced by strings: \code {"XYZ"}, ! Undefined control sequence. l.1134 \code {"sRGB"}, \code{"Apple RGB"}, \code{"CIE RGB"}, \code{"Lab"}, ! Undefined control sequence. l.1134 \code{"sRGB"}, \code {"Apple RGB"}, \code{"CIE RGB"}, \code{"Lab"}, ! Undefined control sequence. l.1134 \code{"sRGB"}, \code{"Apple RGB"}, \code {"CIE RGB"}, \code{"Lab"}, ! Undefined control sequence. l.1134 ...de{"Apple RGB"}, \code{"CIE RGB"}, \code {"Lab"}, ! Undefined control sequence. l.1135 \code {"Luv"}. The converters for these colour spaces are in the object ! Undefined control sequence. l.1136 \code {colorspaces}. [462 page headings, tables,] conditionals, indexing, ! Undefined control sequence. l.1138 The \code {"sRGB"} color space is that used by standard PC monitors. ! Undefined control sequence. l.1139 \code {"Apple RGB"} is used by Apple monitors. \code{"Lab"} and ! Undefined control sequence. l.1139 ...e RGB"} is used by Apple monitors. \code {"Lab"} and ! Undefined control sequence. l.1140 \code {"Luv"} are approximately perceptually uniform ! Undefined control sequence. l.1142 d'Eclairage. \code {XYZ} is a 1931 CIE standard capable of representing ! Undefined control sequence. l.1146 The \code {Lab} and \code{Luv} spaces describe colors of objects, and ! Undefined control sequence. l.1146 The \code{Lab} and \code {Luv} spaces describe colors of objects, and ! Undefined control sequence. l.1148 color. Illuminant \code {D65} is a standard indirect daylight, ! Undefined control sequence. l.1149 Illuminant \code {D50} is close to direct sunlight, and Illuminant ! Undefined control sequence. l.1150 \code {A} is the light from a standard incandescent bulb. Other ! Undefined control sequence. l.1151 ...dard CIE illuminants supported are \code {B}, \code{C}, \code{E} and ! Undefined control sequence. l.1151 ...lluminants supported are \code{B}, \code {C}, \code{E} and ! Undefined control sequence. l.1151 ... supported are \code{B}, \code{C}, \code {E} and ! Undefined control sequence. l.1152 \code {D55}. RGB colour spaces are defined relative to a particular ! Undefined control sequence. l.1158 ...nnot represent all colors, and the \code {clip} option ! Undefined control sequence. l.1161 For the named color spaces \code {color} must be a matrix of values in ! Undefined control sequence. l.1162 the \code {from} color space: in particular opaque colors. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1163 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1165 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1167 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1169 \begin{References} \relax ! Undefined control sequence. l.1170 For all the conversion equations \url {http://www.brucelindbloom.com/}. ! Undefined control sequence. l.1173 \url {http://www.efg2.com/Lab/Graphics/Colors/Chromaticity.htm}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1174 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for i sectioning,mmediate help. ... l.1176 \begin{SeeAlso} \relax ! Undefined control sequence. l.1177 \code {\LinkA{col2rgb}{col2rgb}} and \code{\LinkA{colors}{colors}} for... ! Undefined control sequence. l.1177 \code{\LinkA {col2rgb}{col2rgb}} and \code{\LinkA{colors}{colors}} for... ! Undefined control sequence. l.1177 \code{\LinkA{col2rgb}{col2rgb}} and \code {\LinkA{colors}{colors}} for... ! Undefined control sequence. l.1177 ...inkA{col2rgb}{col2rgb}} and \code{\LinkA {colors}{colors}} for ways... Overfull \hbox (35.62576pt too wide) in paragraph at lines 1172--1179 []\OT1/cmr/m/n/10 For the white points http://www.efg2.com/Lab/Graphics/Colors/ Chromaticity.htm. ! Undefined control sequence. l.1180 \code {\LinkA{make.rgb}{make.rgb}} for specifying other colour spaces. ! Undefined control sequence. l.1180 \code{\LinkA {make.rgb}{make.rgb}} for specifying other colour spaces. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1181 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1183 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1184 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1185 # # The displayable colors from four planes of Lab space ! You can't use `macro parameter character #' in horizontal mode. l.1185 ## The displayable colors from four planes of Lab space ! You can't use `macro parameter character #' in horizontal mode. l.1188 require(graphics); require(stats) # for na.omit [463 toc, environments, defuns,] macros, cross references, insertions, ! You can't use `macro parameter character #' in horizontal mode. l.1225 stopifnot(all.equal(cols, # converting back.. getting the original: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1228 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1229 \end{Examples} ! Undefined control sequence. l.1230 \HeaderA {densCols}{Colors for Smooth Density Plots}{densCols} ! Undefined control sequence. l.1231 \aliasA {blues9}{densCols}{blues9} ! Undefined control sequence. l.1232 \keyword {dplot}{densCols} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1234 \begin{Description} \relax ! Undefined control sequence. l.1235 \code {densCols} produces a vector containing colors which encode the ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1237 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1239 \begin{Usage} Underfull \hbox (badness 2799) in paragraph at lines 1223--1240 []\OT1/cmr/m/n/10 cols <- t(col2rgb(palette())); row-names(cols) <- palette(); cols zaps- Underfull \hbox (badness 2310) in paragraph at lines 1223--1240 \OT1/cmr/m/n/10 255)) stopifnot(all.equal(cols, con-vert-ing back.. get-ting t he orig-i-nal: ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1245 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1247 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1248 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1249 \item[\code{x, y}] the \code{x} and \code{y} arguments provide the x ... ! Undefined control sequence. l.1249 \item[\code{x, y}] the \code {x} and \code{y} arguments provide the x ... ! Undefined control sequence. l.1249 \item[\code{x, y}] the \code{x} and \code {y} arguments provide the x ... ! Undefined control sequence. l.1251 ...s is acceptable. See the function \code (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/epsf.tex This is `epsf.tex' v2.7.4 <14 February 2011> ) {\LinkA{xy.coords}{xy.coor... ! Undefined control sequence. l.1251 ...ceptable. See the function \code{\LinkA {xy.coords}{xy.coords}} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1253 \item[\code{nbin}] numeric vector of length one (for both directions)... ! Undefined control sequence. l.1256 \code {gridsize} in \code{\LinkA{bkde2D}{bkde2D}()}. ! Undefined control sequence. l.1256 \code{gridsize} in \code {\LinkA{bkde2D}{bkde2D}()}. ! Undefined control sequence. l.1256 \code{gridsize} in \code{\LinkA {bkde2D}{bkde2D}()}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1257 \item[\code{bandwidth}] numeric vector (length 1 or 2) of smoothing b... ! Undefined control sequence. l.1258 ...re or less useful default is used. \code {bandwidth} ! Undefined control sequence. l.1259 is subsequently passed to function \code {\LinkA{bkde2D}{bkde2D}}. ! Undefined control sequence. l.1259 ...equently passed to function \code{\LinkA {bkde2D}{bkde2D}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1260 \item[\code{colramp}] function accepting an integer \code{n} as an ar... ! Undefined control sequence. l.1260 ...mp}] function accepting an integer \code {n} as an argument and ! Undefined control sequence. l.1261 returning \code {n} colors. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1262 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1263 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1265 \begin{Details} \relax ! Undefined control sequence. l.1266 \code {densCols} computes and returns the set of colors that will be ! Undefined control sequence. l.1267 used in plotting, calling \code {\LinkA{bkde2D}{bkde2D}(*, ! Undefined control sequence. l.1267 used in plotting, calling \code{\LinkA {bkde2D}{bkde2D}(*, ! Undefined control sequence. l.1268 ...ridsize = nbin, ..)} from package \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.1268 ...N.R-project.org/package=KernSmooth}{\pkg {KernSmooth}}. ! Undefined control sequence. l.1270 \code {blues9} is a set of 9 color shades of blue used as the default in ! LaTe localization,X Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1272 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1274 \begin{Value} ! Undefined control sequence. l.1275 \code {densCols} returns a vector of length \code{nrow(x)} that ! Undefined control sequence. l.1275 ...nsCols} returns a vector of length \code {nrow(x)} that ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1278 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1280 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1282 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1284 \begin{SeeAlso} \relax ! Undefined control sequence. l.1285 \code {\LinkA{bkde2D}{bkde2D}} from package \Rhref{https://CRAN.R-proj... ! Undefined control sequence. l.1285 \code{\LinkA {bkde2D}{bkde2D}} from package \Rhref{https://CRAN.R-proj... ! Undefined control sequence. l.1285 ...nkA{bkde2D}{bkde2D}} from package \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.1285 ...N.R-project.org/package=KernSmooth}{\pkg {KernSmooth}}; ! Undefined control sequence. l.1286 further, \code {\LinkA{smoothScatter}{smoothScatter}()} (package \pkg{... ! Undefined control sequence. l.1286 further, \code{\LinkA {smoothScatter}{smoothScatter}()} (package \pkg{... ! Undefined control sequence. l.1286 ...Scatter}{smoothScatter}()} (package \pkg {graphics}) which ! Undefined control sequence. l.1287 builds on the same computations as \code {densCols}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1288 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1290 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1291 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1299 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1300 \end{Examples} ! Undefined control sequence. l.1301 \HeaderA {dev}{Control Multiple Devices}{dev} ! Undefined control sequence. l.1302 \methaliasA {dev.cur}{dev}{dev.cur} ! Undefined control sequence. l.1303 \methaliasA {dev.list}{dev}{dev.list} ! Undefined control sequence. l.1304 \methaliasA {dev.new}{dev}{dev.new} ! Undefined control sequence. l.1305 \methaliasA {dev.next}{dev}{dev.next} ! Undefined control sequence. l.1306 \methaliasA {dev.off}{dev}{dev.off} ! Undefined control sequence. l.1307 \methaliasA {dev.prev}{dev}{dev.prev} ! Undefined control sequence. l.1308 \methaliasA {dev.set}{dev}{dev.set} ! Undefined control sequence. l.1309 \aliasA {graphics.off}{dev}{graphics.off} ! Undefined control sequence. l.1310 \keyword {device}{dev} ! Undefined control sequence. l.1311 \keyword {iplot}{dev} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1313 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1315 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1317 \begin{Usage} Underfull \hbox (badness 1490) in paragraph at lines 1297--1318 []\OT1/cmr/m/n/10 dcols <- den-sCols(x) graph-ics::plot(x, col = dcols, pch = 2 0, main Underfull \hbox (badness 3108) in paragraph at lines 1297--1318 \OT1/cmr/m/n/10 = "n = 1000") de-v-Con-trol Mul-ti-ple De-vices-dev dev.curde vdev.cur Underfull \hbox (badness 1436) in paragraph at lines 1297--1318 \OT1/cmr/m/n/10 dev.prevdevdev.prev dev.setdevdev.set graph-ics.offdevgraphics. off de-vicedev [464 formatting, and turning on texinfo input format.) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.aux] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1328 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1330 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1331 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1332 \item[\code{which}] An integer specifying a device number. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1333 \item[\code{...}] arguments to be passed to the device selected. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1334 \item[\code{noRStudioGD}] Do not use the RStudio graphics device even if ! Undefined control sequence. l.1336 as \code {width} and \code{height}. ! Undefined control sequence. l.1336 as \code{width} and \code {height}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1337 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1338 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1340 \begin{Details} \relax ! Undefined control sequence. l.1342 ...hics operations occur. There is a \code {"null device"} ! Undefined control sequence. l.1345 \code {\LinkA{getOption}{getOption}("device")}). ! Undefined control sequence. l.1345 \code{\LinkA {getOption}{getOption}("device")}). ! Undefined control sequence. l.1347 ... are associated with a name (e.g., \code {"X11"} or ! Undefined control sequence. l.1348 \code {"postscript"}) and a number in the range 1 to 63; the ! Undefined control sequence. l.1349 \code {"null device"} is always device 1. Once a device has been ! Undefined control sequence. l.1352 list not including the null device. \code {dev.next} and ! Undefined control sequence. l.1353 \code {dev.prev} select the next open device in the appropriate ! Undefined control sequence. l.1356 \code {dev.off} shuts down the specified (by default the current) ! Undefined control sequence. l.1359 attempt to shut down device 1. \code {graphics.off()} shuts down all ! Undefined control sequence. l.1361 internal equivalent of \code {graphics.off()}. ! Undefined control sequence. l.1363 \code {dev.set} makes the specified device the active device. If there ! Undefined control sequence. l.1364 ...h that number, it is equivalent to \code {dev.next}. ! Undefined control sequence. l.1365 If \code {which = 1} it opens a new device and selects that. ! Undefined control sequence. l.1367 \code {dev.new} opens a new device. Normally \R{} will open a new device ! Undefined control sequence. l.1367 ...ev.new} opens a new device. Normally \R {} will open a new device ! Undefined control sequence. l.1370 \code {\LinkA{getOption}{getOption}("device")}.) Note that care is ne... ! Undefined control sequence. l.1370 \code{\LinkA {getOption}{getOption}("device")}.) Note that care is ne... ! Undefined control sequence. l.1371 file-based devices such as \code {\LinkA{pdf}{pdf}} and ! Undefined control sequence. l.1371 file-based devices such as \code{\LinkA {pdf}{pdf}} and ! Undefined control sequence. l.1372 \code {\LinkA{postscript}{postscript}} and in that case file names suc... ! Undefined control sequence. l.1372 \code{\LinkA {postscript}{postscript}} and in that case file names suc... ! Undefined control sequence. l.1373 \file {Rplots.pdf}, \file{Rplots1.pdf}, \dots, \file{Rplots999.pdf} are ! Undefined control sequence. l.1373 \file{Rplots.pdf}, \file {Rplots1.pdf}, \dots, \file{Rplots999.pdf} are ! Undefined control sequence. l.1373 ...s.pdf}, \file{Rplots1.pdf}, \dots, \file {Rplots999.pdf} are ! Undefined control sequence. l.1376 ...ed with the interpretation of e.g.~\code {width}, and for ! Undefined control sequence. l.1377 the standard bitmap devices \code {units = "in", res = 72} is forced if ! Undefined control sequence. l.1378 neither is supplied but both \code {width} and \code{height} are. ! Undefined control sequence. l.1378 ...supplied but both \code{width} and \code {height} are. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1379 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1381 \begin{Value} ! Undefined control sequence. l.1382 \code {dev.cur} returns a length-one named integer vector giving the ! Undefined control sequence. l.1386 \code {dev.list} returns the numbers of all open devices, except device ! Undefined control sequence. l.1388 \code {\LinkA{names}{names}} attribute giving the device names, or \co... ! Undefined control sequence. l.1388 \code{\LinkA {names}{names}} attribute giving the device names, or \co... ! Undefined control sequence. l.1388 ...ribute giving the device names, or \code {NULL} is ! Undefined control sequence. l.1391 \code {dev.next} and \code{dev.prev} return the number and name of the ! Undefined control sequence. l.1391 \code{dev.next} and \code {dev.prev} return the number and name of the ! Undefined control sequence. l.1395 \code {dev.off} returns the number and name of the new active device ! Undefined control sequence. l.1398 \code {dev.set} returns the number and name of the new active device. ! Undefined control sequence. l.1400 \code {dev.new} returns the return value of the device opened, usually ! Undefined control sequence. l.1401 invisible \code {NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1402 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1404 \begin{SeeAlso} \relax ! Undefined control sequence. l.1405 \code {\LinkA{Devices}{Devices}}, such as \code{\LinkA{postscript}{pos... ! Undefined control sequence. l.1405 \code{\LinkA {Devices}{Devices}}, such as \code{\LinkA{postscript}{pos... ! Undefined control sequence. l.1405 ...\LinkA{Devices}{Devices}}, such as \code {\LinkA{postscript}{postsc... ! Undefined control sequence. l.1405 ...Devices}{Devices}}, such as \code{\LinkA {postscript}{postscript}},... ! Undefined control sequence. l.1407 \code {\LinkA{layout}{layout}} and its links for setting up plotting r... ! Undefined control sequence. l.1407 \code{\LinkA {layout}{layout}} and its links for setting up plotting r... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1409 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1411 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1412 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1413 # # Not run: ## Unix-specific example ! You can't use `macro parameter character #' in horizontal mode. l.1413 ## Not run: ## Unix-specific example ! You can't use `macro parameter character #' in horizontal mode. l.1413 ## Not run: # # Unix-specific example ! You can't use `macro parameter character #' in horizontal mode. l.1413 ## Not run: ## Unix-specific example ! You can't use `macro parameter character #' in horizontal mode. l.1419 abline(0, 1) # through the 1:10 points ! You can't use `macro parameter character #' in horizontal mode. l.1421 abline(h = 0, col = "gray") # for the residual plot ! You can't use `macro parameter character #' in horizontal mode. l.1423 dev.off(); dev.off() # - close the two X devices Underfull \hbox (badness 1019) in paragraph at lines 1407--1424 \OT1/cmr/m/n/10 x11() plot(rnorm(10)) dev.set(dev.prev()) abline(0, 1) through the 1:10 ! You can't use `macro parameter character #' in vertical mode. l.1425 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.1425 ## End(Not run) [465] ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1426 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1427 \end{Examples} ! Undefined control sequence. l.1428 \HeaderA {dev.capabilities}{Query Capabilities of the Current Graphics... ! Undefined control sequence. l.1429 \keyword {dplot}{dev.capabilities} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1431 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1433 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1435 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1439 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1441 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1442 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1443 \item[\code{what}] a character vector partially matching the names of... ! Undefined control sequence. l.1444 ...ents listed in section `Value', or \code {NULL} which ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1446 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1447 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1449 \begin{Details} \relax ! Undefined control sequence. l.1452 often by returned as \code {NA}, and may reflect the maximal ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1460 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1462 \begin{Value} ! Undefined control sequence. l.1464 take value \code {NA}: ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1465 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1466 \item[\code{semiTransparency}] logical: Does the device support ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1468 \item[\code{transparentBackground}] character: Does the device support ! Undefined control sequence. l.1469 ... backgrounds? Possible values are \code {"no"}, ! Undefined control sequence. l.1470 \code {"fully"} (only full transparency) and \code{"semi"} ! Undefined control sequence. l.1470 ...lly"} (only full transparency) and \code {"semi"} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1472 \item[\code{rasterImage}] character: To what extent does the device s... ! Undefined control sequence. l.1473 raster images as used by \code {\LinkA{rasterImage}{rasterImage}} and ! Undefined control sequence. l.1473 raster images as used by \code{\LinkA {rasterImage}{rasterImage}} and ! Undefined control sequence. l.1474 \code {\LinkA{grid.raster}{grid.raster}}? Possible values \code{"no"}... ! Undefined control sequence. l.1474 \code{\LinkA {grid.raster}{grid.raster}}? Possible values \code{"no"}... ! Undefined control sequence. l.1474 ...r}{grid.raster}}? Possible values \code {"no"}, \code{"yes"} and ! Undefined control sequence. l.1474 ...r}}? Possible values \code{"no"}, \code {"yes"} and ! Undefined control sequence. l.1475 \code {"non-missing"} (support only for arrays without any missing ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1477 \item[\code{capture}] logical: Does the current device ! Undefined control sequence. l.1478 support raster capture as used by \code {\LinkA{grid.cap}{grid.cap}}? ! Undefined control sequence. l.1478 ...t raster capture as used by \code{\LinkA {grid.cap}{grid.cap}}? Underfull \hbox (badness 2818) in paragraph at lines 1477--1479 []\OT1/cmr/m/n/10 logical: Does the cur-rent de-vice sup-port raster cap-ture a s used by ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1479 \item[\code{locator}] logical: Does the current device ! Undefined control sequence. l.1480 support \code {\LinkA{locator}{locator}} and \code{\LinkA{identify}{id... ! Undefined control sequence. l.1480 support \code{\LinkA {locator}{locator}} and \code{\LinkA{identify}{id... ! Undefined control sequence. l.1480 ...code{\LinkA{locator}{locator}} and \code {\LinkA{identify}{identify}}? ! Undefined control sequence. l.1480 ...inkA{locator}{locator}} and \code{\LinkA {identify}{identify}}? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1481 \item[\code{events}] character: Which events can be generated on thi... ! Undefined control sequence. l.1482 Currently this will be a subset of \code {c("MouseDown", ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1485 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1486 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1488 \begin{SeeAlso} \relax ! Undefined control sequence. l.1489 See \code {\LinkA{getGraphicsEvent}{getGraphicsEvent}} for details on ... ! Undefined control sequence. l.1489 See \code{\LinkA {getGraphicsEvent}{getGraphicsEvent}} for details on ... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1490 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1492 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1493 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1495 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1496 \end{Examples} ! Undefined control sequence. l.1497 \HeaderA {dev.capture}{Capture device output as a raster image}{dev.ca... ! Undefined control sequence. l.1498 \keyword {dplot}{dev.capture} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1500 \begin{Description} \relax ! Undefined control sequence. l.1501 \code {dev.capture} captures the current contents of a graphics device ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1503 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1505 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1509 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1511 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1512 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1513 \item[\code{native}] Logical. If \code{FALSE} the result is a matrix ... ! Undefined control sequence. l.1513 \item[\code{native}] Logical. If \code {FALSE} the result is a matrix ... ! Undefined control sequence. l.1514 color names, if \code {TRUE} the output is returned as a ! Undefined control sequence. l.1515 \code {nativeRaster} object which is more efficient for plotting, but ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1517 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1518 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1520 \begin{Details} \relax ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1523 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1525 \begin{Value} ! Undefined control sequence. l.1526 \code {NULL} if the device does not support capture, otherwise a ! Undefined control sequence. l.1527 matrix of color names (for \code {native = FALSE}) or a ! Undefined control sequence. l.1528 \code {nativeRaster} object (for \code{native = TRUE}). ! Undefined control sequence. l.1528 \code{nativeRaster} object (for \code {native = TRUE}). ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1529 \end{Value} ! Undefined control sequence. l.1530 \HeaderA {dev.flush}{Hold or Flush Output on an On-Screen Graphics Dev... ! Undefined control sequence. l.1531 \aliasA {dev.hold}{dev.flush}{dev.hold} ! Undefined control sequence. l.1532 \keyword {dplot}{dev.flush} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1534 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1537 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1539 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1544 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1546 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1547 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1548 \item[\code{level}] Integer >= 0. The amount by which to change the ... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1550 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1551 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1553 \begin{Details} \relax ! Undefined control sequence. l.1555 \code {dev.hold} increases the level and \code{dev.flush} decreases it. ! Undefined control sequence. l.1555 ...{dev.hold} increases the level and \code {dev.flush} decreases it. ! Undefined control sequence. l.1556 Calling \code {dev.hold} when the hold level is zero increases the hold ! Undefined control sequence. l.1557 ...ts graphics display. When calling \code {dev.flush} [466] ! Undefined control sequence. l.1561 ...is implemented for the cairo-based \code {X11} types ! Undefined control sequence. l.1565 It is available on the \code {quartz} device on macOS. ! Undefined control sequence. l.1567 This is implemented for the \code {windows} device with ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1570 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1572 \begin{Value} ! Undefined control sequence. l.1573 ...er the change, invisibly. This is \code {0} on ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1575 \end{Value} ! Undefined control sequence. l.1576 \HeaderA {dev.interactive}{Is the Current Graphics Device Interactive?... ! Undefined control sequence. l.1577 \aliasA {deviceIsInteractive}{dev.interactive}{deviceIsInteractive} ! Undefined control sequence. l.1578 \keyword {device}{dev.interactive} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1580 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1583 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1585 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1591 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1593 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1594 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1595 \item[\code{orNone}] logical; if \code{TRUE}, the function also returns ! Undefined control sequence. l.1595 \item[\code{orNone}] logical; if \code {TRUE}, the function also returns ! Undefined control sequence. l.1596 \code {TRUE} when \code{\LinkA{.Device}{.Device} == "null device"} and ! Undefined control sequence. l.1596 \code{TRUE} when \code {\LinkA{.Device}{.Device} == "null device"} and ! Undefined control sequence. l.1596 \code{TRUE} when \code{\LinkA {.Device}{.Device} == "null device"} and ! Undefined control sequence. l.1597 \code {\LinkA{getOption}{getOption}("device")} is among the known ! Undefined control sequence. l.1597 \code{\LinkA {getOption}{getOption}("device")} is among the known ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1599 \item[\code{name}] one or more device names as a character vector, ! Undefined control sequence. l.1600 or \code {NULL} to give the existing list. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1601 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1602 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1604 \begin{Details} \relax ! Undefined control sequence. l.1605 The \code {X11} (Unix), \code{windows} (Windows) and \code{quartz} ! Undefined control sequence. l.1605 The \code{X11} (Unix), \code {windows} (Windows) and \code{quartz} ! Undefined control sequence. l.1605 ...nix), \code{windows} (Windows) and \code {quartz} ! Undefined control sequence. l.1607 with \code {JavaGD} (from the package of the same name) and ! Undefined control sequence. l.1608 \code {CairoWin} and \code{CairoX11} (from package \Rhref{https://CRAN... ! Undefined control sequence. l.1608 \code{CairoWin} and \code {CairoX11} (from package \Rhref{https://CRAN... ! Undefined control sequence. l.1608 ...and \code{CairoX11} (from package \Rhref {https://CRAN.R-project.or... ! Undefined control sequence. l.1608 ...//CRAN.R-project.org/package=Cairo}{\pkg {Cairo}}). ! Undefined control sequence. l.1610 \code {deviceIsInteractive}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1611 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1613 \begin{Value} ! Undefined control sequence. l.1614 \code {dev.interactive()} returns a logical, \code{TRUE} if and only i... ! Undefined control sequence. l.1614 ....interactive()} returns a logical, \code {TRUE} if and only if an ! Undefined control sequence. l.1617 \code {deviceIsInteractive} returns the updated list of known ! Undefined control sequence. l.1618 interactive devices, invisibly unless \code {name = NULL}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1619 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1621 \begin{SeeAlso} \relax ! Undefined control sequence. l.1622 \code {\LinkA{Devices}{Devices}} for the available devices on your pla... ! Undefined control sequence. l.1622 \code{\LinkA {Devices}{Devices}} for the available devices on your pla... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1623 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1625 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1626 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1629 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1630 \end{Examples} ! Undefined control sequence. l.1631 \HeaderA {dev.size}{ Find Size of Device Surface }{dev.size} ! Undefined control sequence. l.1632 \keyword {dplot}{dev.size} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1634 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1636 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1638 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1642 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1644 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1645 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1646 \item[\code{units}] the units in which to return the value -- inches,... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1648 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1649 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1651 \begin{Value} ! Undefined control sequence. l.1654 \code {\LinkA{dev.new}{dev.new}()}. ! Undefined control sequence. l.1654 \code{\LinkA {dev.new}{dev.new}()}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1655 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1657 \begin{SeeAlso} \relax ! Undefined control sequence. l.1659 \code {\LinkA{par}{par}("din")}, but this provides a way to access it ! Undefined control sequence. l.1659 \code{\LinkA {par}{par}("din")}, but this provides a way to access it ! Undefined control sequence. l.1661 \code {par("din")} is only updated when a new plot is started, whereas ! Undefined control sequence. l.1662 \code {dev.size} tracks the size as an on-screen device is resized. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1663 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1665 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1666 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1668 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1669 \end{Examples} ! Undefined control sequence. l.1670 \HeaderA {dev2}{Copy Graphics Between Multiple Devices}{dev2} ! Undefined control sequence. l.1671 \aliasA {dev.control}{dev2}{dev.control} ! Undefined control sequence. l.1672 \aliasA {dev.copy}{dev2}{dev.copy} ! Undefined control sequence. l.1673 \aliasA {dev.copy2eps}{dev2}{dev.copy2eps} ! Undefined control sequence. l.1674 \aliasA {dev.copy2pdf}{dev2}{dev.copy2pdf} ! Undefined control sequence. l.1675 \aliasA {dev.print}{dev2}{dev.print} ! Undefined control sequence. l.1676 \keyword {device}{dev2} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1678 \begin{Description} \relax ! Undefined control sequence. l.1679 \code {dev.copy} copies the graphics contents of the current device ! Undefined control sequence. l.1680 to the device specified by \code {which} or to a new device which has ! Undefined control sequence. l.1681 ...eated by the function specified by \code {device} (it is an ! Undefined control sequence. l.1682 error to specify both \code {which} and \code{device}). (If recording ! Undefined control sequence. l.1682 ...r to specify both \code{which} and \code {device}). (If recording Underfull \hbox (badness 10000) in paragraph at lines 1646--1686 \OT1/cmr/m/n/10 Mul-ti-ple De-vices-dev2 dev.controldev2dev.control dev.copydev 2dev.copy Underfull \hbox (badness 10000) in paragraph at lines 1646--1686 \OT1/cmr/m/n/10 dev.copy2epsdev2dev.copy2eps dev.copy2pdfdev2dev.copy2pdf Underfull \hbox (badness 2213) in paragraph at lines 1646--1686 \OT1/cmr/m/n/10 dev.printdev2dev.print de-vicedev2 dev.copy copies the graph-ic s con-tents [467] ! Undefined control sequence. l.1687 \code {dev.print} copies the graphics contents of the current device ! Undefined control sequence. l.1689 \code {device} and then shuts the new device. ! Undefined control sequence. l.1691 \code {dev.copy2eps} is similar to \code{dev.print} but produces an ! Undefined control sequence. l.1691 \code{dev.copy2eps} is similar to \code {dev.print} but produces an ! Undefined control sequence. l.1692 ...tput file in portrait orientation (\code {horizontal = FALSE}). ! Undefined control sequence. l.1693 \code {dev.copy2pdf} is the analogue for PDF output. ! Undefined control sequence. l.1695 \code {dev.control} allows the user to control the recording of ! Undefined control sequence. l.1696 graphics operations in a device. If \code {displaylist} is \code{"inh... ! Undefined control sequence. l.1696 ... device. If \code{displaylist} is \code {"inhibit"} ! Undefined control sequence. l.1697 (\code {"enable"}) then recording is turned off (on). It is only safe ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1701 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1703 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1711 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1713 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1714 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1715 \item[\code{device}] A device function (e.g., \code{x11}, ! Undefined control sequence. l.1715 ...{device}] A device function (e.g., \code {x11}, ! Undefined control sequence. l.1716 \code {postscript}, \ldots) ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1717 \item[\code{...}] Arguments to the \code{device} function above: for ! Undefined control sequence. l.1717 \item[\code{...}] Arguments to the \code {device} function above: for ! Undefined control sequence. l.1718 \code {dev.copy2eps} arguments to \code{\LinkA{postscript}{postscript}... ! Undefined control sequence. l.1718 \code{dev.copy2eps} arguments to \code ) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/doc/manual/R-defs.texi {\LinkA{postscript}{postscript}... ! Undefined control sequence. l.1718 ...{dev.copy2eps} arguments to \code{\LinkA {postscript}{postscript}} ... ! Undefined control sequence. l.1719 \code {dev.copy2pdf}, arguments to \code{\LinkA{pdf}{pdf}}. ! Undefined control sequence. l.1719 \code{dev.copy2pdf}, arguments to \code {\LinkA{pdf}{pdf}}. ! Undefined control sequence. l.1719 ...dev.copy2pdf}, arguments to \code{\LinkA {pdf}{pdf}}. ! Undefined control sequence. l.1720 For \code {dev.print}, this includes \code{which} and by default any ! Undefined control sequence. l.1720 For \code{dev.print}, this includes \code {which} and by default any ! Undefined control sequence. l.1721 \code {\LinkA{postscript}{postscript}} arguments. ! Undefined control sequence. l.1721 \code{\LinkA {postscript}{postscript}} arguments. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1722 \item[\code{which}] A device number specifying the device to copy to. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1723 \item[\code{out.type}] The name of the output device: can be \code{"p... ! Undefined control sequence. l.1723 ... name of the output device: can be \code {"pdf"}, or ! Undefined control sequence. l.1724 \code {"quartz"} (some macOS builds) or \code{"cairo"} (Windows ! Undefined control sequence. l.1724 ...e{"quartz"} (some macOS builds) or \code {"cairo"} (Windows ! Undefined control sequence. l.1725 and some Unix-alikes, see \code {\LinkA{cairo\_pdf}{cairo.Rul.pdf}}). ! Undefined control sequence. l.1725 and some Unix-alikes, see \code{\LinkA {cairo\_pdf}{cairo.Rul.pdf}}). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1726 \item[\code{displaylist}] A character string: the only valid values are ! Undefined control sequence. l.1727 \code {"inhibit"} and \code{"enable"}. ! Undefined control sequence. l.1727 \code{"inhibit"} and \code {"enable"}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1728 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1729 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1731 \begin{Details} \relax ! Undefined control sequence. l.1736 \code {\LinkA{png}{png}}. ! Undefined (/usr/share/texmf-dist/tex/texinfo/txi-en.tex)control sequence. l.1736 \code{\LinkA {png}{png}}. ! Undefined control sequence. l.1738 For \code {dev.copy2eps} and \code{dev.copy2pdf}, \code{width} and ! Undefined control sequence. l.1738 For \code{dev.copy2eps} and \code {dev.copy2pdf}, \code{width} and ! Undefined control sequence. l.1738 ...copy2eps} and \code{dev.copy2pdf}, \code {width} and ! Undefined control sequence. l.1739 \code {height} are taken from the current device unless otherwise ! Undefined control sequence. l.1740 specified. If just one of \code {width} and \code{height} is ! Undefined control sequence. l.1740 .... If just one of \code{width} and \code {height} is ! Undefined control sequence. l.1742 ... copied. The default file name is \code {Rplot.eps} or ! Undefined control sequence. l.1743 \code {Rplot.pdf}, and can be overridden by specifying a \code{file} ! Undefined control sequence. l.1743 ... can be overridden by specifying a \code {file} ! Undefined control sequence. l.1746 Copying to devices such as \code {\LinkA{postscript}{postscript}} and ! Undefined control sequence. l.1746 Copying to devices such as \code{\LinkA {postscript}{postscript}} and ! Undefined control sequence. l.1747 \code {\LinkA{pdf}{pdf}} which need font families pre-specified needs ... ! Undefined control sequence. l.1747 \code{\LinkA {pdf}{pdf}} which need font families pre-specified needs ... ! Undefined control sequence. l.1748 care -- \R {} is unaware of which families were used in a plot and so ! Undefined control sequence. l.1749 ... need to manually specified by the \code {fonts} argument ! Undefined control sequence. l.1750 passed as part of \code {...}. Similarly, if the device to be copied ! Undefined control sequence. l.1751 from was opened with a \code {family} argument, a suitable ! Undefined control sequence. l.1752 \code {family} argument will need to be included in \code{...}. ! Undefined control sequence. l.1752 ...gument will need to be included in \code {...}. ! Undefined control sequence. l.1754 The default for \code {dev.print} is to produce and print a postscript ! Undefined control sequence. l.1755 copy. This will not work unless \code {\LinkA{options}{options}("prin... ! Undefined control sequence. l.1755 ... This will not work unless \code{\LinkA {options}{options}("printc... ! Undefined control sequence. l.1757 \code {\LinkA{postscript}{postscript}} for how to set this up. Window... ! Undefined control sequence. l.1757 \code{\LinkA {postscript}{postscript}} for how to set this up. Window... ! Undefined control sequence. l.1758 prefer to use \code {dev.print(win.print)}. ! Undefined control sequence. l.1760 \code {dev.print} is most useful for producing a postscript print ! Undefined control sequence. l.1762 \code {file} is specified, the plot will be printed. Unless ! Undefined control sequence. l.1763 \code {width}, \code{height} and \code{pointsize} are specified ! Undefined control sequence. l.1763 \code{width}, \code {height} and \code{pointsize} are specified ! Undefined control sequence. l.1763 \code{width}, \code{height} and \code {pointsize} are specified ! Undefined control sequence. l.1765 if necessary to fit on the paper. (\code {pointsize} is rescaled if the ! Undefined control sequence. l.1766 plot is shrunk.) If \code {horizontal} is not specified and the plot [468]) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/version.texi) ! Undefined control sequence. l.1770 If \code {dev.print} is used with a specified \code{device} (even ! Undefined control sequence. l.1770 ...ev.print} is used with a specified \code {device} (even ! Undefined control sequence. l.1771 \code {postscript}) it sets the width and height in the same way as ! Undefined control sequence. l.1772 \code {dev.copy2eps}. This will not be appropriate unless the device ! Undefined control sequence. l.1774 \code {png}, \code{jpeg}, \code{tiff} and \code{bmp} unless ! Undefined control sequence. l.1774 \code{png}, \code {jpeg}, \code{tiff} and \code{bmp} unless ! Undefined control sequence. l.1774 \code{png}, \code{jpeg}, \code {tiff} and \code{bmp} unless ! Undefined control sequence. l.1774 ...png}, \code{jpeg}, \code{tiff} and \code {bmp} unless ! Undefined control sequence. l.1775 \code {units = "inches"} is specified. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1776 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1778 \begin{Value} ! Undefined control sequence. l.1779 \code {dev.copy} returns the name and number of the device which has ! Undefined control sequence. l.1782 \code {dev.print}, \code{dev.copy2eps} and \code{dev.copy2pdf} return ! Undefined control sequence. l.1782 \code{dev.print}, \code {dev.copy2eps} and \code{dev.copy2pdf} return ! Undefined control sequence. l.1782 ...ev.print}, \code{dev.copy2eps} and \code {dev.copy2pdf} return ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1784 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1786 \begin{Note} \relax ! Undefined control sequence. l.1789 \code {dev.copy} copies graphics contents by copying the display list ! Undefined control sequence. l.1794 After the command \code {dev.control("inhibit")}, graphics operations ! Undefined control sequence. l.1795 ...corded in the display list so that \code {dev.copy} and ! Undefined control sequence. l.1796 \code {dev.print} will not copy anything and the contents of a device ! Undefined control sequence. l.1800 terms of memory so the command \code {dev.control("inhibit")} can be ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1802 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1804 \begin{SeeAlso} \relax ! Undefined control sequence. l.1805 \code { [1{/usr/share/texmf /fonts/map/pdftex/updmap/pdftex.map\LinkA{dev.cur}{dev.cur}} and other \code{dev.xxx} functions. ! Undefined control sequence. l.1805 \code{\LinkA {dev.cur}{dev.cur}} and other \code{dev.xxx} functions. ! Undefined control sequence. l.1805 ...LinkA{dev.cur}{dev.cur}} and other \code {dev.xxx} functions. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1806 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1808 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1809 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.1810 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.1810 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.1811 x11() # on a Unix-alike ! You can't use `macro parameter character #' in horizontal mode. l.1815 ...h = 6, height = 6, horizontal = FALSE) # prints it ! You can't use `macro parameter character #' in vertical mode. l.1819 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.1819 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1820 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1821 \end{Examples} ! Undefined control sequence. l.1822 \HeaderA {dev2bitmap}{Graphics Device for Bitmap Files via Ghostscript... ! Undefined control sequence. l.1823 \aliasA {bitmap}{dev2bitmap}{bitmap} ! Undefined control sequence. l.1824 \keyword {utilities}{dev2bitmap} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1826 \begin{Description} \relax ! Undefined control sequence. l.1827 \code {bitmap} generates a graphics file. ! Undefined control sequence. l.1828 \code {dev2bitmap} copies the current graphics device to a file in a ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1830 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1832 \begin{Usage} Underfull \hbox (badness 2744) in paragraph at lines 1819--1833 []\OT1/cmr/m/n/10 End(Not run) dev2bitmapGraphics De-vice for Bitmap Files vi a Overfull \hbox (1.49698pt too wide) in paragraph at lines 1840--1840 []\OT1/cmtt/m/n/10 dev2bitmap(file, type = "png16m", height = 7, width = 7, res = 72,[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1841 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1843 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1844 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1845 \item[\code{file}] The output file name, with an appropriate extension. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1846 \item[\code{type}] The type of bitmap. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1847 \item[\code{width, height}] Dimensions of the display region. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1848 \item[\code{res}] Resolution, in dots per inch. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1849 \item[\code{units}] The units in which \code{height} and \code{width}... ! Undefined control sequence. l.1849 ...m[\code{units}] The units in which \code {height} and \code{width} are ! Undefined control sequence. l.1849 ...e units in which \code{height} and \code {width} are ! Undefined control sequence. l.1850 given. Can be \code {in} (inches), \code{px} (pixels), \code{cm} or ! Undefined control sequence. l.1850 given. Can be \code{in} (inches), \code {px} (pixels), \code{cm} or ! Undefined control sequence. l.1850 ...{in} (inches), \code{px} (pixels), \code {cm} or ! Undefined control sequence. l.1851 \code {mm}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1852 \item[\code{pointsize}] The pointsize to be used for text: defaults to ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1854 \item[\code{...}] Other parameters passed to \code{\LinkA{postscript}... ! Undefined control sequence. l.1854 ...e{...}] Other parameters passed to \code {\LinkA{postscript}{postsc... ! Undefined control sequence. l.1854 ... Other parameters passed to \code{\LinkA {postscript}{postscript}} or ! Undefined control sequence. l.1855 \code {\LinkA{pdf}{pdf}}. ! Undefined control sequence. l.1855 \code{\LinkA {pdf}{pdf}}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1856 \item[\code{method}] Should the plot be done by \code{\LinkA{postscri... ! Undefined control sequence. l.1856 ...ethod}] Should the plot be done by \code {\LinkA{postscript}{postsc... ! Undefined control sequence. l.1856 ... Should the plot be done by \code{\LinkA {postscript}{postscript}} or ! Undefined control sequence. l.1857 \code {\LinkA{pdf}{pdf}}? ! Undefined control sequence. l.1857 \code{\LinkA {pdf}{pdf}}? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1858 \item[\code{taa, gaa}] Number of bits of antialiasing for text and fo... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1861 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1862 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1864 \begin{Details} \relax ! Undefined control sequence. l.1865 \code {dev2bitmap} works by copying the current device to a ! Undefined control sequence. l.1866 \code {\LinkA{postscript}{postscript}} or \code{\LinkA{pdf}{pdf}} devi... ! Undefined control sequence. l.1866 \code{\LinkA {postscript}{postscript}} or \code{\LinkA{pdf}{pdf}} devi... ! Undefined control sequence. l.1866 ...\LinkA{postscript}{postscript}} or \code {\LinkA{pdf}{pdf}} device,... ! Undefined control sequence. l.1866 ...postscript}{postscript}} or \code{\LinkA {pdf}{pdf}} device, and ! Undefined control sequence. l.1867 post-processing the output file using \code {ghostscript}. ! Undefined control sequence. l.1868 \code {bitmap} works in the same way using a \code{postscript} device ! Undefined control sequence. l.1868 ...map} works in the same way using a \code {postscript} device [469] ! Undefined control sequence. l.1871 You will need \code {ghostscript}: the full path to the executable can ! Undefined control sequence. l.1872 be set by the environment variable \env {R\_GSCMD}. If this is unset, a ! Undefined control sequence. l.1874 Unix alike \code {"gs"} is used, and on Windows the setting of the ! Undefined control sequence. l.1875 environment variable \env {GSC} is used, otherwise commands ! Undefined control sequence. l.1876 \code {"gswi64c.exe"} then \code{"gswin32c.exe"} are tried. ! Undefined control sequence. l.1876 \code{"gswi64c.exe"} then \code {"gswin32c.exe"} are tried. ! Undefined control sequence. l.1878 ...able will depend on the version of \code {ghostscript}, ! Undefined control sequence. l.1880 \code {"jpeg"}, \code{"jpegcmyk"}, \code{"jpeggray"}, ! Undefined control sequence. l.1880 \code{"jpeg"}, \code {"jpegcmyk"}, \code{"jpeggray"}, ! Undefined control sequence. l.1880 \code{"jpeg"}, \code{"jpegcmyk"}, \code {"jpeggray"}, ! Undefined control sequence. l.1881 \code {"tiffcrle"}, \code{"tiffg3"}, ! Undefined control sequence. l.1881 \code{"tiffcrle"}, \code {"tiffg3"}, ! Undefined control sequence. l.1882 \code {"tiffg32d"}, \code{"tiffg4"}, \code{"tiffgray"}, \code{"tifflzw"}, ! Undefined control sequence. l.1882 \code{"tiffg32d"}, \code {"tiffg4"}, \code{"tiffgray"}, \code{"tifflzw"}, ! Undefined control sequence. l.1882 \code{"tiffg32d"}, \code{"tiffg4"}, \code {"tiffgray"}, \code{"tifflzw"}, ! Undefined control sequence. l.1882 ...code{"tiffg4"}, \code{"tiffgray"}, \code {"tifflzw"}, ! Undefined control sequence. l.1883 \code {"tiffpack"}, \code{"tiff12nc"}, \code{"tiff24nc"}, \code{"tiff3... ! Undefined control sequence. l.1883 \code{"tiffpack"}, \code {"tiff12nc"}, \code{"tiff24nc"}, \code{"tiff3... ! Undefined control sequence. l.1883 \code{"tiffpack"}, \code{"tiff12nc"}, \code {"tiff24nc"}, \code{"tiff3... ! Undefined control sequence. l.1883 ...de{"tiff12nc"}, \code{"tiff24nc"}, \code {"tiff32nc"} ! Undefined control sequence. l.1884 \code {"png16"}, \code{"png16m"}, \code{"png256"}, \code{"png48"}, ! Undefined control sequence. l.1884 \code{"png16"}, \code {"png16m"}, \code{"png256"}, \code{"png48"}, ! Undefined control sequence. l.1884 \code{"png16"}, \code{"png16m"}, \code {"png256"}, \code{"png48"}, ! Undefined control sequence. l.1884 ... \code{"png16m"}, \code{"png256"}, \code {"png48"}, ! Undefined control sequence. l.1885 \code {"pngmono"}, \code{"pnggray"}, \code{"pngalpha"}, ! Undefined control sequence. l.1885 \code{"pngmono"}, \code {"pnggray"}, \code{"pngalpha"}, ! Undefined control sequence. l.1885 \code{"pngmono"}, \code{"pnggray"}, \code {"pngalpha"}, ! Undefined control sequence. l.1886 \code {"bmp16"}, \code{"bmp16m"} \code{"bmp256"}, \code{"bmp32b"}, ! Undefined control sequence. l.1886 \code{"bmp16"}, \code {"bmp16m"} \code{"bmp256"}, \code{"bmp32b"}, ! Undefined control sequence. l.1886 \code{"bmp16"}, \code{"bmp16m"} \code {"bmp256"}, \code{"bmp32b"}, ! Undefined control sequence. l.1886 ..., \code{"bmp16m"} \code{"bmp256"}, \code {"bmp32b"}, ! Undefined control sequence. l.1887 \code {"bmpgray"}, \code{"bmpmono"}. ! Undefined control sequence. l.1887 \code{"bmpgray"}, \code {"bmpmono"}. ! Undefined control sequence. l.1889 The default type, \code {"png16m"}, supports 24-bit colour and ! Undefined control sequence. l.1890 anti-aliasing. Type \code {"png256"} uses a palette of 256 colours and ! Undefined control sequence. l.1892 \code {"pngmono"}, or \code{"pnggray"} if anti-aliasing is desired. ! Undefined control sequence. l.1892 \code{"pngmono"}, or \code {"pnggray"} if anti-aliasing is desired. ! Undefined control sequence. l.1894 transparency should use \code {"pngalpha"}. ! Undefined control sequence. l.1896 ...olour TIFF image you probably want \code {"tiff24nc"}, ! Undefined control sequence. l.1898 ... TIFF types support transparency. \code {"tiff32nc"} uses ! Undefined control sequence. l.1902 \code {Rplots\%03d.png} can be used: this is interpreted by Ghostscript. Underfull \hbox (badness 2134) in paragraph at lines 1901--1903 []\OT1/cmr/m/n/10 For for-mats which con-tain a sin-gle im-age, a file spec-i-f i-ca-tion like ! Undefined control sequence. l.1904 For \code {dev2bitmap} if just one of \code{width} and \code{height} is ! Undefined control sequence. l.1904 For \code{dev2bitmap} if just one of \code {width} and \code{height} is ! Undefined control sequence. l.1904 ...p} if just one of \code{width} and \code {height} is ! Undefined control sequence. l.1906 ...copied. The main reason to prefer \code {method = "pdf"} ! Undefined control sequence. l.1909 For graphics parameters such as \code {"cra"} that need to work in ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1912 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1914 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1916 \end{Value} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1918 \begin{Section} {Conventions} ! Undefined control sequence. l.1922 \code {res}: ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1936 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1938 \begin{Note} \relax ! Undefined control sequence. l.1939 Although using \code {type = "pdfwrite"} will work for simple plots, it ! Undefined control sequence. l.1940 is not recommended. Either use \code {\LinkA{pdf}{pdf}} to produce PDF ! Undefined control sequence. l.1940 ...ot recommended. Either use \code{\LinkA {pdf}{pdf}} to produce PDF ! Undefined control sequence. l.1941 directly, or call \command {ps2pdf -dAutoRotatePages=/None} on the ! Undefined control sequence. l.1942 output of \code {\LinkA{postscript}{postscript}}: that command is opti... ! Undefined control sequence. l.1942 output of \code{\LinkA {postscript}{postscript}}: that command is opti... ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1944 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1946 \begin{SeeAlso} \relax ! Undefined control sequence. l.1947 \code {\LinkA{savePlot}{savePlot}}, which for \code{windows} and ! Undefined control sequence. l.1947 \code{\LinkA {savePlot}{savePlot}}, which for \code{windows} and ! Undefined control sequence. l.1947 ...kA{savePlot}{savePlot}}, which for \code {windows} and ! Undefined control sequence. l.1948 \code {X11(type = "cairo")} provides a simple way to record a PNG [470] ! Undefined control sequence. l.1951 \code {\LinkA{postscript}{postscript}}, \code{\LinkA{pdf}{pdf}}, \code... ! Undefined control sequence. l.1951 \code{\LinkA {postscript}{postscript}}, \code{\LinkA{pdf}{pdf}}, \code... ! Undefined control sequence. l.1951 ...e{\LinkA{postscript}{postscript}}, \code {\LinkA{pdf}{pdf}}, \code{... ! Undefined control sequence. l.1951 ...A{postscript}{postscript}}, \code{\LinkA {pdf}{pdf}}, \code{\LinkA{... ! Undefined control sequence. l.1951 ...script}}, \code{\LinkA{pdf}{pdf}}, \code {\LinkA{png}{png}}, ! Undefined control sequence. l.1951 ...}, \code{\LinkA{pdf}{pdf}}, \code{\LinkA {png}{png}}, ! Undefined control sequence. l.1952 \code {\LinkA{jpeg}{jpeg}}, \code{\LinkA{tiff}{tiff}} and \code{bmp}. ! Undefined control sequence. l.1952 \code{\LinkA {jpeg}{jpeg}}, \code{\LinkA{tiff}{tiff}} and \code{bmp}. ! Undefined control sequence. l.1952 \code{\LinkA{jpeg}{jpeg}}, \code {\LinkA{tiff}{tiff}} and \code{bmp}. ! Undefined control sequence. l.1952 \code{\LinkA{jpeg}{jpeg}}, \code{\LinkA {tiff}{tiff}} and \code{bmp}. ! Undefined control sequence. l.1952 ...}}, \code{\LinkA{tiff}{tiff}} and \code {bmp}. ! Undefined control sequence. l.1954 To display an array of data, see \code {\LinkA{image}{image}}. ! Undefined control sequence. l.1954 ...splay an array of data, see \code{\LinkA {image}{image}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1955 \end{SeeAlso} ! Undefined control sequence. l.1956 \HeaderA {devAskNewPage}{ Prompt before New Page }{devAskNewPage} ! Undefined control sequence. l.1957 \keyword {dplot}{devAskNewPage} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1959 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1962 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1964 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1968 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1970 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1971 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1972 \item[\code{ask}] \code{NULL} or a logical value. If \code{TRUE}, th... ! Undefined control sequence. l.1972 \item[\code{ask}] \code {NULL} or a logical value. If \code{TRUE}, th... ! Undefined control sequence. l.1972 ...code{NULL} or a logical value. If \code {TRUE}, the user ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1974 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1975 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1977 \begin{Details} \relax ! Undefined control sequence. l.1984 setting of \code {\LinkA{options}{options}("device.ask.default")}. ! Undefined control sequence. l.1984 setting of \code{\LinkA {options}{options}("device.ask.default")}. ! Undefined control sequence. l.1990 \code {\LinkA{dev.control}{dev.control}}) which it usually is only on ... ! Undefined control sequence. l.1990 \code{\LinkA {dev.control}{dev.control}}) which it usually is only on ... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1991 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1993 \begin{Value} ! Undefined control sequence. l.1995 Invisibly if \code {ask} is logical. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1996 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.1998 \begin{SeeAlso} \relax ! Undefined control sequence. l.1999 \code {\LinkA{plot.new}{plot.new}}, \code{\LinkA{grid.newpage}{grid.ne... ! Undefined control sequence. l.1999 \code{\LinkA {plot.new}{plot.new}}, \code{\LinkA{grid.newpage}{grid.ne... ! Undefined control sequence. l.1999 \code{\LinkA{plot.new}{plot.new}}, \code {\LinkA{grid.newpage}{grid.ne... ! Undefined control sequence. l.1999 ...LinkA{plot.new}{plot.new}}, \code{\LinkA {grid.newpage}{grid.newpage}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2000 \end{SeeAlso} ! Undefined control sequence. l.2001 \HeaderA {Devices}{List of Graphical Devices}{Devices} ! Undefined control sequence. l.2002 \aliasA {device}{Devices}{device} ! Undefined control sequence. l.2003 \keyword {device}{Devices} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2005 \begin{Description} \relax ! Undefined control sequence. \code l.2009 \item \code {\LinkA{pdf}{pdf}} Write PDF graphics commands to a file ! Undefined control sequence. l.2009 \item \code{\LinkA {pdf}{pdf}} Write PDF graphics commands to a file ! Undefined control sequence. \code l.2010 \item \code {\LinkA{postscript}{postscript}} Writes PostScript graphic... ! Undefined control sequence. l.2010 \item \code{\LinkA {postscript}{postscript}} Writes PostScript graphic... ! Undefined control sequence. \code l.2012 \item \code {\LinkA{xfig}{xfig}} Device for XFIG graphics file format ! Undefined control sequence. l.2012 \item \code{\LinkA {xfig}{xfig}} Device for XFIG graphics file format ! Undefined control sequence. \code l.2013 \item \code {\LinkA{bitmap}{bitmap}} bitmap pseudo-device via ! Undefined control sequence. l.2013 \item \code{\LinkA {bitmap}{bitmap}} bitmap pseudo-device via ! Undefined control sequence. l.2014 \code {Ghostscript} (if available). ! Undefined control sequence. \code l.2015 \item \code {\LinkA{pictex}{pictex}} Writes TeX/PicTeX graphics comman... ! Undefined control sequence. l.2015 \item \code{\LinkA {pictex}{pictex}} Writes TeX/PicTeX graphics comman... ! Undefined control sequence. l.2020 ...llowing devices will be functional if \R {} was compiled to use ! Undefined control sequence. \code l.2024 \item \code {\LinkA{X11}{X11}} The graphics device for the X11 windowi... ! Undefined control sequence. l.2024 \item \code{\LinkA {X11}{X11}} The graphics device for the X11 windowi... ! Undefined control sequence. \code l.2025 \item \code {\LinkA{cairo\_pdf}{cairo.Rul.pdf}}, \code{cairo\_ps} PDF ... ! Undefined control sequence. l.2025 \item \code{\LinkA {cairo\_pdf}{cairo.Rul.pdf}}, \code{cairo\_ps} PDF ... ! Undefined control sequence. l.2025 ...LinkA{cairo\_pdf}{cairo.Rul.pdf}}, \code {cairo\_ps} PDF and PostSc... ! Undefined control sequence. \code l.2027 \item \code {\LinkA{svg}{svg}} SVG device based on cairo graphics. ! Undefined control sequence. l.2027 \item \code{\LinkA {svg}{svg}} SVG device based on cairo graphics. ! Undefined control sequence. \code l.2028 \item \code {\LinkA{png}{png}} PNG bitmap device ! Undefined control sequence. l.2028 \item \code{\LinkA {png}{png}} PNG bitmap device ! Undefined control sequence. \code l.2029 \item \code {\LinkA{jpeg}{jpeg}} JPEG bitmap device ! Undefined control sequence. l.2029 \item \code{\LinkA {jpeg}{jpeg}} JPEG bitmap device ! Undefined control sequence. \code l.2030 \item \code {\LinkA{bmp}{bmp}} BMP bitmap device ! Undefined control sequence. l.2030 \item \code{\LinkA {bmp}{bmp}} BMP bitmap device ! Undefined control sequence. \code l.2031 \item \code {\LinkA{tiff}{tiff}} TIFF bitmap device ! Undefined control sequence. l.2031 \item \code{\LinkA {tiff}{tiff}} TIFF bitmap device ! Undefined control sequence. \code l.2033 \item \code {\LinkA{quartz}{quartz}} The graphics device for the macOS ! Undefined control sequence. l.2033 \item \code{\LinkA {quartz}{quartz}} The graphics device for the macOS ! Undefined control sequence. l.2035 macOS where it can be used from the \code {R.app} GUI and from the [471] ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2041 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2043 \begin{Details} \relax ! Undefined control sequence. l.2046 \code {\LinkA{options}{options}("device")} which is initially set as t... ! Undefined control sequence. l.2046 \code{\LinkA {options}{options}("device")} which is initially set as t... ! Undefined control sequence. l.2048 \code {\LinkA{pdf}{pdf}} (or the setting of \env{R\_DEFAULT\_DEVICE}) ! Undefined control sequence. l.2048 \code{\LinkA {pdf}{pdf}} (or the setting of \env{R\_DEFAULT\_DEVICE}) ! Undefined control sequence. l.2048 ...LinkA{pdf}{pdf}} (or the setting of \env {R\_DEFAULT\_DEVICE}) ! Undefined control sequence. l.2050 device is known to be available, when \code {pdf()} is used. ! Undefined control sequence. l.2052 It is possible for an \R {} package to provide further graphics devices ! Undefined control sequence. l.2054 ...d PGF/TiKZ (TeX-based graphics, see \url {http://pgf.sourceforge.ne... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2055 \end{Details} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2057 \begin{SeeAlso} \relax ! Undefined control sequence. l.2060 \code {\LinkA{X11}{X11}.options}, \code{\LinkA{quartz.options}{quartz.... ! Undefined control sequence. l.2060 \code{\LinkA {X11}{X11}.options}, \code{\LinkA{quartz.options}{quartz.... ! Undefined control sequence. l.2060 \code{\LinkA{X11}{X11}.options}, \code {\LinkA{quartz.options}{quartz.... ! Undefined control sequence. l.2060 ...{\LinkA{X11}{X11}.options}, \code{\LinkA {quartz.options}{quartz.op... ! Undefined control sequence. l.2061 \code {\LinkA{ps.options}{ps.options}} and \code{\LinkA{pdf.options}{p... ! Undefined control sequence. l.2061 \code{\LinkA {ps.options}{ps.options}} and \code{\LinkA{pdf.options}{p... ! Undefined control sequence. l.2061 ...LinkA{ps.options}{ps.options}} and \code {\LinkA{pdf.options}{pdf.o... ! Undefined control sequence. l.2061 ...s.options}{ps.options}} and \code{\LinkA {pdf.options}{pdf.options}... ! Undefined control sequence. l.2064 \code {\LinkA{dev.interactive}{dev.interactive}}, ! Undefined control sequence. l.2064 \code{\LinkA {dev.interactive}{dev.interactive}}, ! Undefined control sequence. l.2065 \code {\LinkA{dev.cur}{dev.cur}}, \code{\LinkA{dev.print}{dev.print}}, ! Undefined control sequence. l.2065 \code{\LinkA {dev.cur}{dev.cur}}, \code{\LinkA{dev.print}{dev.print}}, ! Undefined control sequence. l.2065 \code{\LinkA{dev.cur}{dev.cur}}, \code {\LinkA{dev.print}{dev.print}}, ! Undefined control sequence. l.2065 ...{\LinkA{dev.cur}{dev.cur}}, \code{\LinkA {dev.print}{dev.print}}, ! Undefined control sequence. l.2066 \code {\LinkA{graphics.off}{graphics.off}}, \code{\LinkA{image}{image}}, ! Undefined control sequence. l.2066 \code{\LinkA {graphics.off}{graphics.off}}, \code{\LinkA{image}{image}}, ! Undefined control sequence. l.2066 ...inkA{graphics.off}{graphics.off}}, \code {\LinkA{image}{image}}, ! Undefined control sequence. l.2066 ...aphics.off}{graphics.off}}, \code{\LinkA {image}{image}}, ! Undefined control sequence. l.2067 \code {\LinkA{dev2bitmap}{dev2bitmap}}. ! Undefined control sequence. l.2067 \code{\LinkA {dev2bitmap}{dev2bitmap}}. ! Undefined control sequence. l.2069 \code {\LinkA{capabilities}{capabilities}} to see if \code{\LinkA{X11}... ! Undefined control sequence. l.2069 \code{\LinkA {capabilities}{capabilities}} to see if \code{\LinkA{X11}... ! Undefined control sequence. l.2069 ...bilities}{capabilities}} to see if \code {\LinkA{X11}{X11}}, ! Undefined control sequence. l.2069 ...s}{capabilities}} to see if \code{\LinkA {X11}{X11}}, ! Undefined control sequence. l.2070 \code {\LinkA{jpeg}{jpeg}} \code{\LinkA{png}{png}}, \code{\LinkA{tiff}... ! Undefined control sequence. l.2070 \code{\LinkA {jpeg}{jpeg}} \code{\LinkA{png}{png}}, \code{\LinkA{tiff}... ! Undefined control sequence. l.2070 \code{\LinkA{jpeg}{jpeg}} \code {\LinkA{png}{png}}, \code{\LinkA{tiff}... ! Undefined control sequence. l.2070 \code{\LinkA{jpeg}{jpeg}} \code{\LinkA {png}{png}}, \code{\LinkA{tiff}... ! Undefined control sequence. l.2070 ...g}{jpeg}} \code{\LinkA{png}{png}}, \code {\LinkA{tiff}{tiff}}, ! Undefined control sequence. l.2070 ...}} \code{\LinkA{png}{png}}, \code{\LinkA {tiff}{tiff}}, ! Undefined control sequence. l.2071 \code {\LinkA{quartz}{quartz}} and the cairo-based devices are available. ! Undefined control sequence. l.2071 \code{\LinkA {quartz}{quartz}} and the cairo-based devices are available. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2072 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2074 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2075 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2076 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.2076 ## Not run: ! You can't use `macro parameter character #' in horizontal mode. l.2077 # # open the default screen device on this platform if no device is ! You can't use `macro parameter character #' in horizontal mode. l.2077 ## open the default screen device on this platform if no device is ! You can't use `macro parameter character #' in horizontal mode. l.2078 # # open ! You can't use `macro parameter character #' in horizontal mode. l.2078 ## open Underfull \hbox (badness 4353) in paragraph at lines 2069--2080 []\OT1/cmr/m/n/10 capabilitiescapabilities to see if X11X11, jpegjpeg png-png, tifftiff, ! You can't use `macro parameter character #' in vertical mode. l.2081 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.2081 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2082 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2083 \end{Examples} ! Undefined control sequence. l.2084 \HeaderA {embedFonts}{Embed Fonts in PostScript and PDF}{embedFonts} ! Undefined control sequence. l.2085 \keyword {device}{embedFonts} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2087 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2090 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2092 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2097 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2099 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2100 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2101 \item[\code{file}] a character string giving the name of the original... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2102 \item[\code{format}] the format for the new file (with fonts embedded... ! Undefined control sequence. l.2104 ..., it is guessed from the suffix of \code {file}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2105 \item[\code{outfile}] the name of the new file (with fonts embedded). ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2106 \item[\code{fontpaths}] a character vector giving directories that ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2108 \item[\code{options}] a character vector containing further options to ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2110 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2111 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2113 \begin{Details} \relax ! Undefined control sequence. l.2124 something like \code {options="-sFONTPATH=path/to/font"}. Underfull \hbox (badness 2103) in paragraph at lines 2122--2125 []\OT1/cmr/m/n/10 If the spe-cial font is not in-stalled for Ghostscript, you w ill need Underfull \hbox (badness 1460) in paragraph at lines 2122--2125 \OT1/cmr/m/n/10 to tell Ghostscript where the font is, us-ing some-thing like o ptions="- ! Undefined control sequence. l.2126 You will need \code {ghostscript}: the full path to the executable can ! Undefined control sequence. l.2127 be set by the environment variable \env {R\_GSCMD}. If this is ! Undefined control sequence. l.2129 path: on a Unix alike \code {"gs"} is used, and on Windows the setting ! Undefined control sequence. l.2130 of the environment variable \env {GSC} is used, otherwise commands ! Undefined control sequence. l.2131 \code {"gswi64c.exe"} then \code{"gswin32c.exe"} are tried. ! Undefined control sequence. l.2131 \code{"gswi64c.exe"} then \code {"gswin32c.exe"} are tried. ! Undefined control sequence. l.2133 The \code {format} is by default \code{"ps2write"}, when the original ! Undefined control sequence. l.2133 The \code{format} is by default \code {"ps2write"}, when the original ! Undefined control sequence. l.2134 file has a \code {.ps} or \code{.eps} suffix, or \code{"pdfwrite"} when ! Undefined control sequence. l.2134 file has a \code{.ps} or \code {.eps} suffix, or \code{"pdfwrite"} when ! Undefined control sequence. l.2134 ...ode{.ps} or \code{.eps} suffix, or \code {"pdfwrite"} when ! Undefined control sequence. l.2135 the original file has a \code {.pdf} suffix. For versions of ! Undefined control sequence. l.2136 Ghostscript before 9.10, \code {format = "pswrite"} or \code{format = ! Undefined control sequence. l.2136 ...9.10, \code{format = "pswrite"} or \code {format = ! Undefined control sequence. l.2137 ...swrite"} can be used: as from 9.14 \code {format = "eps2write"} is [472] ! Undefined control sequence. l.2145 documentation) are \option {-dMaxSubsetPct=100}, ! Undefined control sequence. l.2146 \option {-dSubsetFonts=true} and \option{-dEmbedAllFonts=true}. ! Undefined control sequence. l.2146 \option{-dSubsetFonts=true} and \option {-dEmbedAllFonts=true}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2147 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2149 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2153 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2155 \begin{SeeAlso} \relax ! Undefined control sequence. l.2156 \code {\LinkA{postscriptFonts}{postscriptFonts}}, ! Undefined control sequence. l.2156 \code{\LinkA {postscriptFonts}{postscriptFonts}}, ! Undefined control sequence. l.2157 \code {\LinkA{Devices}{Devices}}. ! Undefined control sequence. l.2157 \code{\LinkA {Devices}{Devices}}. Underfull \hbox (badness 6157) in paragraph at lines 2144--2158 []\OT1/cmr/m/n/10 Some other op-tions which can be use-ful (see your Ghostscrip t Underfull \hbox (badness 10000) in paragraph at lines 2144--2158 \OT1/cmr/m/n/10 doc-u-men-ta-tion) are -dMaxSubsetPct=100, -dSubsetFonts=true a nd - ! Undefined control sequence. l.2161 \url {https://www.r-project.org/doc/Rnews/Rnews_2006-2.pdf}. ! Missing $ inserted. $ l.2161 ...tps://www.r-project.org/doc/Rnews/Rnews_ 2006-2.pdf}. ! Extra }, or forgotten $. l.2161 ...-project.org/doc/Rnews/Rnews_2006-2.pdf} . ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2162 \end{SeeAlso} ! Missing $ inserted. $ l.2162 \end{SeeAlso} ! Missing } inserted. } l.2162 \end{SeeAlso} ! Undefined control sequence. l.2163 \HeaderA {extendrange}{Extend a Numerical Range by a Small Percentage}... ! Undefined control sequence. l.2164 \keyword {dplot}{extendrange} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2166 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2169 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2171 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 2159--2172 []\OT1/cmr/m/n/10 Paul Mur-rell and Brian Rip-ley (2006) Non-standard fonts in Underfull \hbox (badness 1867) in paragraph at lines 2159--2172 \OT1/cmr/m/n/10 PostScript and PDF graph-ics. \OT1/cmr/m/it/10 R News\OT1/cmr/m /n/10 , 6(2):41--47. https://www.r- Underfull \hbox (badness 2512) in paragraph at lines 2159--2172 \OT1/cmr/m/n/10 project.org/doc/Rnews/Rnews$[]006 \OMS/cmsy/m/n/10 ^^@ \OT1/cmr /m/n/10 2\OML/cmm/m/it/10 :pdf:$ \OT1/cmr/m/n/10 ex-ten-drange-Ex-tend a Nu-mer - ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2175 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2177 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2178 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2179 \item[\code{x}] numeric vector; not used if \code{r} is specified. ! Undefined control sequence. l.2179 ...de{x}] numeric vector; not used if \code {r} is specified. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2180 \item[\code{r}] numeric vector of length 2; defaults to the ! Undefined control sequence. l.2181 \code {\LinkA{range}{range}} of \code{x}. ! Undefined control sequence. l.2181 \code{\LinkA {range}{range}} of \code{x}. ! Undefined control sequence. l.2181 \code{\LinkA{range}{range}} of \code {x}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2182 \item[\code{f}] number specifying the fraction by which the range sho... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2184 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2185 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2187 \begin{Value} ! Undefined control sequence. l.2188 A numeric vector of length 2, \code {r + c(-f,f) * diff(r)}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2189 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2191 \begin{SeeAlso} \relax ! Undefined control sequence. l.2192 \code {\LinkA{range}{range}}; \code{\LinkA{pretty}{pretty}} which can be ! Undefined control sequence. l.2192 \code{\LinkA {range}{range}}; \code{\LinkA{pretty}{pretty}} which can be ! Undefined control sequence. l.2192 \code{\LinkA{range}{range}}; \code {\LinkA{pretty}{pretty}} which can be ! Undefined control sequence. l.2192 \code{\LinkA{range}{range}}; \code{\LinkA {pretty}{pretty}} which can be ! Undefined control sequence. l.2193 ...dered a sophisticated extension of \code {extendrange}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2194 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2196 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2197 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2199 (r <- range(x)) # 1 5 ! You can't use `macro parameter character #' in horizontal mode. l.2200 extendrange(x) # 0.8 5.2 ! You can't use `macro parameter character #' in horizontal mode. l.2201 extendrange(x, f= 0.01) # 0.96 5.04 ! You can't use `macro parameter character #' in horizontal mode. l.2202 # # Use 'r' if you have it already: ! You can't use `macro parameter character #' in horizontal mode. l.2202 ## Use 'r' if you have it already: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2205 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2206 \end{Examples} ! Undefined control sequence. l.2207 \HeaderA {getGraphicsEvent}{Wait for a mouse or keyboard event from a ... ! Undefined control sequence. l.2208 \aliasA {getGraphicsEventEnv}{getGraphicsEvent}{getGraphicsEventEnv} ! Undefined control sequence. l.2209 \aliasA {setGraphicsEventEnv}{getGraphicsEvent}{setGraphicsEventEnv} ! Undefined control sequence. l.2210 \aliasA {setGraphicsEventHandlers}{getGraphicsEvent}{setGraphicsEventH... ! Undefined control sequence. l.2211 \keyword {iplot}{getGraphicsEvent} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2213 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2216 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2218 \begin{Usage} Underfull \hbox (badness 1694) in paragraph at lines 2182--2219 \OT1/cmr/m/n/10 A nu-meric vec-tor of length 2, r + c(-f,f) * diff(r). rangera nge; Underfull \hbox (badness 1308) in paragraph at lines 2182--2219 \OT1/cmr/m/n/10 drange. x <- 1:5 (r <- range(x)) 1 5 ex-ten-drange(x) 0.8 Underfull \hbox (badness 1701) in paragraph at lines 2182--2219 \OT1/cmr/m/n/10 sEv-en-tEn-vget-Graph-ic-sEv-entset-Graph-ic-sEv-en-tEnv set-Gr aph-ic-sEv-en-tHandlers- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2230 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2232 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2233 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2234 \item[\code{prompt}] prompt to be displayed to the user in the graphi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2235 \item[\code{onMouseDown}] a function to respond to mouse clicks ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2236 \item[\code{onMouseMove}] a function to respond to mouse movement ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2237 \item[\code{onMouseUp}] a function to respond to mouse button releases ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2238 \item[\code{onKeybd}] a function to respond to key presses ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2239 \item[\code{onIdle}] a function to call when no events are pending [473] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2240 \item[\code{consolePrompt}] prompt to be displayed to the user in the... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2241 \item[\code{which}] which graphics device does the call apply to? ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2242 \item[\code{...}] items including handlers to be placed in the event ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2243 \item[\code{env}] an environment to be used as the event environment ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2244 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2245 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2247 \begin{Details} \relax ! Undefined control sequence. l.2249 only the \code {windows()}, \code{X11(type = "Xlib")} ! Undefined control sequence. l.2249 only the \code{windows()}, \code {X11(type = "Xlib")} ! Undefined control sequence. l.2250 and \code {X11(type = "cairo")} screen displays ! Undefined control sequence. l.2251 in base \R {}). Event handlers may be installed to respond to events ! Undefined control sequence. l.2255 arguments to \code {getGraphicsEvent} are given, then it uses those ! Undefined control sequence. l.2256 in a call to \code {setGraphicsEventHandlers} to replace any existing ! Undefined control sequence. l.2257 ... is for compatibility with pre-2.12.0 \R {} ! Undefined control sequence. l.2259 set them using \code {setGraphicsEventHandlers} or \code{setGraphicsEv... ! Undefined control sequence. l.2259 ...\code{setGraphicsEventHandlers} or \code {setGraphicsEventEnv} on ! Undefined control sequence. l.2260 ...ore graphics devices, and then use \code {getGraphicsEvent()} with ! Undefined control sequence. l.2262 \code {getGraphicsEventEnv()} may be used to save the event environment ! Undefined control sequence. l.2265 The names of the arguments in \code {getGraphicsEvent} are special. When ! Undefined control sequence. l.2267 environment for functions named \code {onMouseDown}, \code{onMouseMove}, ! Undefined control sequence. l.2267 ...unctions named \code{onMouseDown}, \code {onMouseMove}, ! Undefined control sequence. l.2268 \code {onMouseUp}, \code{onKeybd}, and \code{onIdle}, and use them as ! Undefined control sequence. l.2268 \code{onMouseUp}, \code {onKeybd}, and \code{onIdle}, and use them as ! Undefined control sequence. l.2268 \code{onMouseUp}, \code{onKeybd}, and \code {onIdle}, and use them as ! Undefined control sequence. l.2270 \code {prompt} for a label on the graphics device. Two other special ... ! Undefined control sequence. l.2271 \code {which}, which will identify the graphics device, and ! Undefined control sequence. l.2272 \code {result}, where the result of the last event ! Undefined control sequence. l.2273 ...be stored before being returned by \code {getGraphicsEvent()}. ! Undefined control sequence. l.2276 \code {function(buttons, x, y)}. The coordinates \code{x} ! Undefined control sequence. l.2276 ...(buttons, x, y)}. The coordinates \code {x} ! Undefined control sequence. l.2277 and \code {y} will be passed to mouse event handlers in device indepen... ! Undefined control sequence. l.2278 ...lower left corner of the window is \code {(0,0)}, ! Undefined control sequence. l.2279 the upper right is \code {(1,1)}). The \code{buttons} argument ! Undefined control sequence. l.2279 ...upper right is \code{(1,1)}). The \code {buttons} argument ! Undefined control sequence. l.2285 \code {function(key)}. A single element character vector will be passed ! Undefined control sequence. l.2287 keys will have been processed, so \code {shift-a} will be passed as ! Undefined control sequence. l.2288 \code {"A"}. The following special keys may also be passed to the han... ! Undefined control sequence. l.2291 \item Control keys, passed as \code {"Ctrl-A"}, etc. ! Undefined control sequence. l.2293 \code {"Left", "Up", "Right", "Down", "PgUp", "PgDn", "End", "Home"} ! Undefined control sequence. l.2294 \item Edit keys, passed as one of \code {"Ins", "Del"} ! Undefined control sequence. l.2295 \item Function keys, passed as one of \code {"F1", "F2", ...} ! Undefined control sequence. l.2300 The idle event handler \code {onIdle} should be a function with no ! Undefined control sequence. l.2301 ...s. If the function is undefined or \code {NULL}, then R will ! Undefined control sequence. l.2307 Currently, \code {onIdle} is only implemented for \code{X11()} devices. ! Undefined control sequence. l.2307 ...de{onIdle} is only implemented for \code {X11()} devices. [474] ! Undefined control sequence. l.2309 Note that calling \code {Sys.sleep()} is not recommended within an idle ! Undefined control sequence. l.2310 handler - \code {Sys.sleep()} removes pending graphics events in order to ! Undefined control sequence. l.2313 \code {Sys.sleep()} are lost, and currently do not trigger the event ! Undefined control sequence. l.2314 handlers registered via \code {getGraphicsEvent} or ! Undefined control sequence. l.2315 \code {setGraphicsEventHandlers}. ! Undefined control sequence. l.2325 a non-\code {NULL} value which will be returned as the value of ! Undefined control sequence. l.2326 \code {getGraphicsEvent}, or ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2332 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2334 \begin{Value} ! Undefined control sequence. l.2336 \code {getGraphicsEvent} returns a non-\code{NULL} value returned from... ! Undefined control sequence. l.2336 \code{getGraphicsEvent} returns a non-\code {NULL} value returned from... ! Undefined control sequence. l.2337 In a non-interactive session, \code {getGraphicsEvent} will return \co... ! Undefined control sequence. l.2337 ...code{getGraphicsEvent} will return \code {NULL} immediately. It ! Undefined control sequence. l.2338 will also return \code {NULL} if the user closes the last window that ... ! Undefined control sequence. l.2340 \code {getGraphicsEventEnv} returns the current event environment for ... ! Undefined control sequence. l.2341 or \code {NULL} if none has been set. ! Undefined control sequence. l.2343 \code {setGraphicsEventEnv} and \code{setGraphicsEventHandlers} return... ! Undefined control sequence. l.2343 \code{setGraphicsEventEnv} and \code {setGraphicsEventHandlers} return... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2345 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2347 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2349 \end{Author} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2351 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2352 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.2353 # This currently only works on the Windows, X11(type = "Xlib"), and ! You can't use `macro parameter character #' in horizontal mode. l.2354 # X11(type = "cairo") screen devices... ! You can't use `macro parameter character #' in horizontal mode. l.2355 # # Not run: ! You can't use `macro parameter character #' in horizontal mode. l.2355 ## Not run: ! Extra }, or forgotten $. l.2377 } ! Missing $ inserted. $ l.2378 Underfull \hbox (badness 1242) in paragraph at lines 2368--2378 []\OT1/cmr/m/n/10 dragmousedown <- func-tion(buttons, x, y) startx <<- x start y <<- y Underfull \hbox (badness 10000) in paragraph at lines 2379--2391 []\OT1/cmr/m/n/10 dragmousemove <- func-tion(buttons, x, y) de-vset() deltax < - ! Extra }, or forgotten $. l.2394 } ! Missing $ inserted. $ l.2395 ! Extra }, or forgotten $. l.2400 } ! Missing $ inserted. $ l.2401 Underfull \hbox (badness 10000) in paragraph at lines 2396--2401 []\OT1/cmr/m/n/10 keydown <- func-tion(key) if (key == "q") re-turn(invisible( 1)) ! You can't use `macro parameter character #' in vertical mode. l.2413 # # End(Not run) ! You can't use `macro parameter character #' in vertical mode. l.2413 ## End(Not run) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2414 \end{ExampleCode} ! Missing } inserted. } l.2414 \end{ExampleCode} ! Missing } inserted. } l.2414 \end{ExampleCode} ! Missing } inserted. } l.2414 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2415 \end{Examples} ! Undefined control sequence. l.2416 \HeaderA {gray}{Gray Level Specification}{gray} ! Undefined control sequence. l.2417 \aliasA {grey}{gray}{grey} ! Undefined control sequence. l.2418 \keyword {color}{gray} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2420 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2422 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2424 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2429 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2431 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2432 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2433 \item[\code{level}] a vector of desired gray levels between \code{0} and ! Undefined control sequence. l.2433 ...tor of desired gray levels between \code {0} and ! Undefined control sequence. l.2434 \code {1}; zero indicates \code{"black"} and one indicates ! Undefined control sequence. l.2434 \code{1}; zero indicates \code {"black"} and one indicates ! Undefined control sequence. l.2435 \code {"white"}. [475]}] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2436 \item[\code{alpha}] the opacity, if specified. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2437 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2438 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2440 \begin{Details} \relax ! Undefined control sequence. l.2441 The values returned by \code {gray} can be used with a \code{col=} ! Undefined control sequence. l.2441 ... by \code{gray} can be used with a \code {col=} ! Undefined control sequence. l.2442 ...cation in graphics functions or in \code {\LinkA{par}{par}}. ! Undefined control sequence. l.2442 ...in graphics functions or in \code{\LinkA {par}{par}}. ! Undefined control sequence. l.2444 \code {grey} is an alias for \code{gray}. ! Undefined control sequence. l.2444 \code{grey} is an alias for \code {gray}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2445 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2447 \begin{Value} ! Undefined control sequence. l.2448 ...or of colors of the same length as \code {level}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2449 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2451 \begin{SeeAlso} \relax ! Undefined control sequence. l.2452 \code {\LinkA{rainbow}{rainbow}}, ! Undefined control sequence. l.2452 \code{\LinkA {rainbow}{rainbow}}, ! Undefined control sequence. l.2453 \code {\LinkA{hsv}{hsv}}, ! Undefined control sequence. l.2453 \code{\LinkA {hsv}{hsv}}, ! Undefined control sequence. l.2454 \code {\LinkA{hcl}{hcl}}, ! Undefined control sequence. l.2454 \code{\LinkA {hcl}{hcl}}, ! Undefined control sequence. l.2455 \code {\LinkA{rgb}{rgb}}. ! Undefined control sequence. l.2455 \code{\LinkA {rgb}{rgb}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for [2]explanation. Type H for immediate help. ... l.2456 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2458 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2459 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2461 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2462 \end{Examples} ! Undefined control sequence. l.2463 \HeaderA {gray.colors}{Gray Color Palette}{gray.colors} ! Undefined control sequence. l.2464 \aliasA {grey.colors}{gray.colors}{grey.colors} ! Undefined control sequence. l.2465 \keyword {color}{gray.colors} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2467 \begin{Description} \relax ! Undefined control sequence. l.2468 Create a vector of \code {n} gamma-corrected gray colors. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2469 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2471 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2476 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2478 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2479 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2480 \item[\code{n}] the number of gray colors (\eqn{\ge 1}{}) to be in the ! Undefined control sequence. l.2480 ...code{n}] the number of gray colors (\eqn (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc {\ge 1}{}) to be in the ! Missing $ inserted. $ l.2480 ...{n}] the number of gray colors (\eqn{\ge 1}{}) to be in the ! Extra }, or forgotten $. l.2480 ...] the number of gray colors (\eqn{\ge 1} {}) to be in the ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2482 \item [\code{start}] starting gray level in the palette (should be bet... ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2482 \item[\code{start}] starting gray level in the palette (should be bet... ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2482 \item[\code{start}] starting gray level in the palette (should be bet... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2482 \item[\code{start}] starting gray level in the palette (should be bet... ! Undefined control sequence. l.2483 \code {0} and \code{1} where zero indicates \code{"black"} and one ! Undefined control sequence. l.2483 \code{0} and \code {1} where zero indicates \code{"black"} and one ! Undefined control sequence. l.2483 ... and \code{1} where zero indicates \code {"black"} and one ! Undefined control sequence. l.2484 indicates \code {"white"}). ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2485 \item [\code{end}] ending gray level in the palette. ! Missing $ inserted. $ l.2485 \item[\code{end}] ending gray level in the palette. Overfull \hbox (346.79971pt too wide) in paragraph at lines 2480--2485 []\OT1/cmr/m/n/10 the num-ber of gray col-ors ($\OMS/cmsy/m/n/10 ^^U \OT1/cmr/m /n/10 1[])\OML/cmm/m/it/10 tobeinthepalette:startinggraylevelinthepalette\OT1/c mr/m/n/10 (\OML/cmm/m/it/10 shouldbebetween\OT1/cmr/m/n/10 0\OML/cmm/m/it/10 an d\OT1/cmr/m/n/10 1\OML/cmm/m/it/10 wherezeroindicates[]andoneindicates[]\OT1/cm r/m/n/10 )\OML/cmm/m/it/10 :[]$ ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2485 \item[\code{end}] ending gray level in the palette. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2486 \item[\code{gamma}] the gamma correction. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2487 \item[\code{alpha}] the opacity, is specified. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2488 \end{ldescription} ! Missing } inserted. } l.2488 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2489 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2491 \begin{Details} \relax ! Undefined control sequence. l.2492 The function \code {gray.colors} chooses a series of \code{n} ! Undefined control sequence. l.2492 ...e{gray.colors} chooses a series of \code {n} ! Undefined control sequence. l.2493 gamma-corrected gray levels between \code {start} and \code{end}: ! Undefined control sequence. l.2493 ...ay levels between \code{start} and \code {end}: ! Undefined control sequence. l.2494 \code {seq(start\textasciicircum{}gamma, end\textasciicircum{}gamma, l... ! Undefined control sequence. l.2496 This palette is used in \code {\LinkA{barplot.default}{barplot.default}}. ! Undefined control sequence. l.2496 This palette is used in \code{\LinkA {barplot.default}{barplot.default}}. ! Undefined control sequence. l.2498 \code {grey.colors} is an alias for \code{gray.colors}. ! Undefined control sequence. l.2498 \code{grey.colors} is an alias for \code {gray.colors}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2499 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2501 \begin{Value} ! Undefined control sequence. l.2502 A vector of \code {n} gray colors. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2503 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2505 \begin{SeeAlso} \relax ! Undefined control sequence. l.2506 \code {\LinkA{gray}{gray}}, ! Undefined control sequence. l.2506 \code{\LinkA {gray}{gray}}, ! Undefined control sequence. l.2507 \code {\LinkA{rainbow}{rainbow}}, ! Undefined control sequence. l.2507 \code{\LinkA {rainbow}{rainbow}}, ! Undefined control sequence. l.2508 \code {\LinkA{palette}{palette}}. ! Undefined control sequence. l.2508 \code{\LinkA {palette}{palette}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2509 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2511 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2512 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2517 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2518 \end{Examples} ! Undefined control sequence. l.2519 \HeaderA {grSoftVersion}{Report Versions of Graphics Software}{grSoftV... ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2521 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2523 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2525 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2529 \end{Usage} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2531 \begin{Value} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2534 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2535 \item[\code{cairo}] the version of cairographics in use, or \code{""} if ! Undefined control sequence. l.2535 ...ersion of cairographics in use, or \code {""} if ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2538 \end{ldescription} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2543 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2544 \item[\code{libpng}] the version of \code{libpng} in use, or \code{""... ! Undefined control sequence. l.2544 \item[\code{libpng}] the version of \code {libpng} in use, or \code{""... ! Undefined control sequence. l.2544 ...ersion of \code{libpng} in use, or \code {""} if ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2546 \item[\code{jpeg}] the version of the JPEG headers used for compilation, ! Undefined control sequence. l.2547 or \code {""} if JPEG support was not compiled in. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2548 \item[\code{libtiff}] the version of \code{libtiff} in use, or \code{... ! Undefined control sequence. l.2548 \item[\code{libtiff}] the version of \code {libtiff} in use, or \code{... ! Undefined control sequence. l.2548 ...rsion of \code{libtiff} in use, or \code {""} if ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2551 \end{ldescription} ! Undefined control sequence. l.2555 Note that \code {libjpeg-turbo} used on some Linux distributions ! Undefined control sequence. l.2556 reports its version as \code {"6.2"}, the IJG version from which it fo... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2557 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2559 \begin{SeeAlso} \relax ! Undefined control sequence. l.2560 \code {\LinkA{extSoftVersion}{extSoftVersion}} for versions of non-gra... ! Undefined control sequence. l.2560 \code{\LinkA {extSoftVersion}{extSoftVersion}} for versions of non-gra... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2561 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2563 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2564 \begin{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2566 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2567 \end{Examples} ! Undefined control sequence. l.2568 \HeaderA {hcl}{HCL Color Specification}{hcl} ! Undefined control sequence. l.2569 \keyword {color}{hcl} ! Undefined control sequence. l.2570 \keyword {dplot}{hcl} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2572 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2575 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2577 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2581 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2583 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2584 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2585 \item[\code{h}] The hue of the color specified as an angle in the range ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2587 \item[\code{c}] The chroma of the color. The upper bound for chroma ... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2589 \item[\code{l}] A value in the range [0,100] giving the luminance of the ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2592 \item[\code{alpha}] numeric vector of values in the range \code{[0,1]... ! Undefined control sequence. l.2592 ...eric vector of values in the range \code {[0,1]} for [476 [-1] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2594 \item[\code{fixup}] a logical value which indicates whether the resul... ! Undefined control sequence. l.2596 if \code {fixup} is \code{FALSE} RGB components lying outside the ! Undefined control sequence. l.2596 if \code{fixup} is \code {FALSE} RGB components lying outside the ! Undefined control sequence. l.2597 range [0,1] will result in an \code {NA} value. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2598 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2599 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2601 \begin{Details} \relax ! Undefined control sequence. l.2604 ...erceptual changes in color. Thus, \code {hcl} ! Undefined control sequence. l.2605 ...as a perceptually based version of \code {\LinkA{hsv}{hsv}}. ! Undefined control sequence. l.2605 ...rceptually based version of \code{\LinkA {hsv}{hsv}}. ! Undefined control sequence. l.2623 Semi-transparent colors (\code {0 < alpha < 1}) are supported only on ! Undefined control sequence. l.2624 some devices: see \code {\LinkA{rgb}{rgb}}. ! Undefined control sequence. l.2624 some devices: see \code{\LinkA {rgb}{rgb}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2625 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2627 \begin{Value} ! Undefined control sequence. l.2629 specifications by \R {} graphics functions. ! Undefined control sequence. l.2631 Missing or infinite values of any of \code {h}, \code{c}, \code{l} ! Undefined control sequence. l.2631 ...nfinite values of any of \code{h}, \code {c}, \code{l} ! Undefined control sequence. l.2631 ...lues of any of \code{h}, \code{c}, \code {l} ! Undefined control sequence. l.2632 result in \code {NA}: such values of \code{alpha} are taken as \code{1} ! Undefined control sequence. l.2632 result in \code{NA}: such values of \code {alpha} are taken as \code{1} ! Undefined control sequence. l.2632 ...alues of \code{alpha} are taken as \code {1} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2634 \end{Value} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2636 \begin{Note} \relax ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2641 \end{Note} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2643 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2645 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2647 \begin{References} \relax ! Undefined control sequence. l.2652 \url {http://www.ci.tuwien.ac.at/Conferences/DSC-2003}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2653 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2655 \begin{SeeAlso} \relax ! Undefined control sequence. l.2656 \code {\LinkA{hsv}{hsv}}, ! Undefined control sequence. l.2656 \code{\LinkA {hsv}{hsv}}, ! Undefined control sequence. l.2657 \code {\LinkA{rgb}{rgb}}. ! Undefined control sequence. l.2657 \code{\LinkA {rgb}{rgb}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2658 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2660 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2661 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.2664 # The Foley and Van Dam PhD Data. ! You can't use `macro parameter character #' in vertical mode. l.2677 # The Original (Metaphorical) Colors (Ouch!) ! You can't use `macro parameter character #' in vertical mode. l.2680 # A Color Tetrad (Maximal Color Differences) ! You can't use `macro parameter character #' in vertical mode. l.2683 # Same, but lighter and less colorful ! You can't use `macro parameter character #' in horizontal mode. l.2684 # Turn off automatic correction to make sure ! You can't use `macro parameter character #' in horizontal mode. l.2685 # that we have defined real colors. ! You can't use `macro parameter character #' in vertical mode. l.2689 # Analogous Colors ! You can't use `macro parameter character #' in horizontal mode. l.2690 # Good for those with red/green color confusion ! You can't use `macro parameter character #' in vertical mode. l.2693 # Metaphorical Colors ! You can't use `macro parameter character #' in vertical mode. l.2696 # Cool Colors ! You can't use `macro parameter character #' in vertical mode. l.2699 # Warm Colors ! You can't use `macro parameter character #' in vertical mode. l.2702 # Single Color [477]] ! You can't use `macro parameter character #' in vertical mode. l.2705 # # Exploring the hcl() color space {in its mapping to R's sRGB colors}: ! You can't use `macro parameter character #' in vertical mode. l.2705 ## Exploring the hcl() color space {in its mapping to R's sRGB colors}: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2708 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2709 \end{Examples} ! Undefined control sequence. l.2710 \HeaderA {Hershey}{Hershey Vector Fonts in R}{Hershey} ! Undefined control sequence. l.2711 \keyword {aplot}{Hershey} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2713 \begin{Description} \relax ! Undefined control sequence. l.2714 If the \code {family} graphical parameter (see \code{\LinkA{par}{par}}) ! Undefined control sequence. l.2714 ...e{family} graphical parameter (see \code {\LinkA{par}{par}}) ! Undefined control sequence. l.2714 ...y} graphical parameter (see \code{\LinkA {par}{par}}) ! Undefined control sequence. l.2718 When using the \code {\LinkA{text}{text}} and \code{\LinkA{contour}{co... ! Undefined control sequence. l.2718 When using the \code{\LinkA {text}{text}} and \code{\LinkA{contour}{co... ! Undefined control sequence. l.2718 ... the \code{\LinkA{text}{text}} and \code {\LinkA{contour}{contour}}... ! Undefined control sequence. l.2718 ...ode{\LinkA{text}{text}} and \code{\LinkA {contour}{contour}} functions ! Undefined control sequence. l.2719 Hershey fonts may be selected via the \code {vfont} argument, which is ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2723 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2725 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2729 \end{Usage} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2731 \begin{Details} \relax Underfull \hbox (badness 10000) in paragraph at lines 2732--2733 ! Undefined control sequence. l.2736 character in terms of a set of points; \R {} renders the character by ! Undefined control sequence. l.2738 the outline of each character means that \R {} can arbitrarily transform ! Undefined control sequence. l.2749 ...nnot use mathematical expressions (\code {\LinkA{plotmath}{plotmath... ! Undefined control sequence. l.2749 ...e mathematical expressions (\code{\LinkA {plotmath}{plotmath}}) with ! Undefined control sequence. l.2754 font families via \code {par(family)} and specifying the desired font ! Undefined control sequence. l.2755 ...in, bold, italic, bold-italic) via \code {par(font)}. ! Undefined control sequence. l.2759 \Tabular {ll}{ ! Misplaced alignment tab character &. l.2760 family & faces available \\{} ! Undefined control sequence. l.2761 \code {"HersheySerif"} & plain, bold, italic, bold-italic \\{} ! Misplaced alignment tab character &. l.2761 \code{"HersheySerif"} & plain, bold, italic, bold-italic \\{} ! Undefined control sequence. l.2762 \code {"HersheySans"} & plain, bold, italic, bold-italic \\{} ! Misplaced alignment tab character &. l.2762 \code{"HersheySans"} & plain, bold, italic, bold-italic \\{} ! Undefined control sequence. l.2763 \code {"HersheyScript"} & plain, bold \\{} ! Misplaced alignment tab character &. l.2763 \code{"HersheyScript"} & plain, bold \\{} ! Undefined control sequence. l.2764 \code {"HersheyGothicEnglish"} & plain \\{} ! Misplaced alignment tab character &. l.2764 \code{"HersheyGothicEnglish"} & plain \\{} ! Undefined control sequence. l.2765 \code {"HersheyGothicGerman"} & plain \\{} ! Misplaced alignment tab character &. l.2765 \code{"HersheyGothicGerman"} & plain \\{} ! Undefined control sequence. l.2766 \code {"HersheyGothicItalian"} & plain \\{} ! Misplaced alignment tab character &. l.2766 \code{"HersheyGothicItalian"} & plain \\{} ! Undefined control sequence. l.2767 \code {"HersheySymbol"} & plain, bold, italic, bold-italic \\{} ! Misplaced alignment tab character &. l.2767 \code{"HersheySymbol"} & plain, bold, italic, bold-italic \\{} ! Undefined control sequence. l.2768 \code {"HersheySansSymbol"} & plain, italic \\{} ! Misplaced alignment tab character &. l.2768 \code{"HersheySansSymbol"} & plain, italic \\{} Underfull \hbox (badness 10000) in paragraph at lines 2759--2770 ! Undefined control sequence. l.2771 In the \code {vfont} specification for the \code{text} and ! Undefined control sequence. l.2771 ...\code{vfont} specification for the \code {text} and ! Undefined control sequence. l.2772 \code {contour} functions, the Hershey font is specified by a typeface ! Undefined control sequence. l.2773 (e.g., \code {serif} or \code{sans serif}) and a fontindex or ! Undefined control sequence. l.2773 (e.g., \code{serif} or \code {sans serif}) and a fontindex or ! Undefined control sequence. l.2774 `style' (e.g., \code {plain} or \code{italic}). The first ! Undefined control sequence. l.2774 `style' (e.g., \code{plain} or \code {italic}). The first ! Undefined control sequence. l.2775 element of \code {vfont} specifies the typeface and the second element ! Undefined control sequence. l.2777 \code {demo(Hershey)} shows the character \code{a} produced by each of ! Undefined control sequence. l.2777 ...demo(Hershey)} shows the character \code {a} produced by each of ! Undefined control sequence. l.2780 The available \code {typeface} and \code{fontindex} values are ! Undefined control sequence. l.2780 The available \code{typeface} and \code {fontindex} values are ! Undefined control sequence. l.2781 ...as list components of the variable \code {Hershey}. ! Undefined control sequence. l.2782 The allowed pairs for \code {(typeface, fontindex)} are: ! Undefined control sequence. l.2787 \Tabular {ll}{ ! Misplaced alignment tab character &. l.2788 serif & plain \\{} ! Misplaced alignment tab character &. l.2789 serif & italic \\{} ! Misplaced alignment tab character &. l.2790 serif & bold \\{} ! Misplaced alignment tab character &. l.2791 serif & bold italic \\{} ! Misplaced alignment tab character &. l.2792 serif & cyrillic \\{} ! Misplaced alignment tab character &. l.2793 serif & oblique cyrillic \\{} ! Misplaced alignment tab character &. l.2794 serif & EUC \\{} ! Misplaced alignment tab character &. l.2795 sans serif & plain \\{} ! Misplaced alignment tab character &. l.2796 sans serif & italic \\{} ! Misplaced alignment tab character &. l.2797 sans serif & bold \\{} ! Misplaced alignment tab character &. l.2798 sans serif & bold italic \\{} ! Misplaced alignment tab character &. l.2799 script & plain \\{} ! Misplaced alignment tab character &. l.2800 script & italic \\{} ! Misplaced alignment tab character &. l.2801 script & bold \\{} ! Misplaced alignment tab character &. l.2802 gothic english & plain \\{} ! Misplaced alignment tab character &. l.2803 gothic german & plain \\{} ! Misplaced alignment tab character &. l.2804 gothic italian & plain \\{} ! Misplaced alignment tab character &. l.2805 serif symbol & plain \\{} ! Misplaced alignment tab character &. l.2806 serif symbol & italic \\{} ! Misplaced alignment tab character &. l.2807 serif symbol & bold \\{} ! Misplaced alignment tab character &. l.2808 serif symbol & bold italic \\{} ! Misplaced alignment tab character &. l.2809 sans serif symbol & plain \\{} ! Misplaced alignment tab character &. l.2810 sans serif symbol & italic \\{} ! Undefined control sequence. l.2812 ... indices of these are available as \code {Hershey\$allowed}. [478] [-2 ! Undefined control sequence. l.2817 sequences, which all begin with a \samp {\bsl{}}. When \R{} encounte... ! Undefined control sequence. l.2817 ...ences, which all begin with a \samp{\bsl {}}. When \R{} encounters a ! Undefined control sequence. l.2817 ...ll begin with a \samp{\bsl{}}. When \R {} encounters a ! Undefined control sequence. l.2818 \samp {\bsl{}}, rather than drawing the \samp{\bsl{}}, it treats the ! Undefined control sequence. l.2818 \samp{\bsl {}}, rather than drawing the \samp{\bsl{}}, it treats the ! Undefined control sequence. l.2818 ...p{\bsl{}}, rather than drawing the \samp {\bsl{}}, it treats the ! Undefined control sequence. l.2818 ...l{}}, rather than drawing the \samp{\bsl {}}, it treats the ! Undefined control sequence. l.2822 form: \samp {\bsl{}123}. The three digits following the \samp{\bsl{}} ! Undefined control sequence. l.2822 form: \samp{\bsl {}123}. The three digits following the \samp{\bsl{}} ! Undefined control sequence. l.2822 ...}. The three digits following the \samp {\bsl{}} ! Undefined control sequence. l.2822 ...he three digits following the \samp{\bsl {}} ! Undefined control sequence. l.2824 code for \code {p} is 160 so the strings \code{"p"} and ! Undefined control sequence. l.2824 ...for \code{p} is 160 so the strings \code {"p"} and ! Undefined control sequence. l.2825 \code {"\bsl{}160"} are equivalent. This is useful for producing ! Undefined control sequence. l.2825 \code{"\bsl {}160"} are equivalent. This is useful for producing ! Undefined control sequence. l.2828 ...ul escape sequences all begin with \samp {\bsl{}\bsl{}}. ! Undefined control sequence. l.2828 ...cape sequences all begin with \samp{\bsl {}\bsl{}}. ! Undefined control sequence. l.2828 ...equences all begin with \samp{\bsl{}\bsl {}}. ! Undefined control sequence. l.2830 doubled in \R {} character strings, so they need to be entered with ! Undefined control sequence. l.2839 \samp {\bsl{}\bsl{}ab}. For example, the escape sequence \samp{\bsl{}\... ! Undefined control sequence. l.2839 \samp{\bsl {}\bsl{}ab}. For example, the escape sequence \samp{\bsl{}\... ! Undefined control sequence. l.2839 \samp{\bsl{}\bsl {}ab}. For example, the escape sequence \samp{\bsl{}\... ! Undefined control sequence. l.2839 .... For example, the escape sequence \samp {\bsl{}\bsl{}*a} ! Undefined control sequence. l.2839 ... example, the escape sequence \samp{\bsl {}\bsl{}*a} ! Undefined control sequence. l.2839 ...le, the escape sequence \samp{\bsl{}\bsl {}*a} ! Undefined control sequence. l.2840 ... Greek alpha. The second table in \code {demo(Hershey)} ! Undefined control sequence. l.2846 \samp {\bsl{}\bsl{}ab} are provided for producing ISO Latin-1 characters. ! Undefined control sequence. l.2846 \samp{\bsl {}\bsl{}ab} are provided for producing ISO Latin-1 characters. ! Undefined control sequence. l.2846 \samp{\bsl{}\bsl {}ab} are provided for producing ISO Latin-1 characters. ! Undefined control sequence. l.2849 For example, \samp {\bsl{}366} produces the character o with an umlaut. ! Undefined control sequence. l.2849 For example, \samp{\bsl {}366} produces the character o with an umlaut. ! Undefined control sequence. l.2850 The third table in \code {demo(Hershey)} shows all of the ISO [479] ! Undefined control sequence. l.2857 `sharp s' (\samp {U+00DF}, also known as `esszett') ! Undefined control sequence. l.2858 is rendered as \code {ss}. ! Undefined control sequence. l.2863 escape sequence. For example, \samp {\bsl{}\bsl{}LI} produces the zod... ! Undefined control sequence. l.2863 escape sequence. For example, \samp{\bsl {}\bsl{}LI} produces the zod... ! Undefined control sequence. l.2863 ...sequence. For example, \samp{\bsl{}\bsl {}LI} produces the zodiac ... ! Undefined control sequence. l.2864 Libra, and \samp {\bsl{}\bsl{}JU} produces the astronomical sign for J... ! Undefined control sequence. l.2864 Libra, and \samp{\bsl {}\bsl{}JU} produces the astronomical sign for J... ! Undefined control sequence. l.2864 Libra, and \samp{\bsl{}\bsl {}JU} produces the astronomical sign for J... ! Undefined control sequence. l.2865 The fourth table in \code {demo(Hershey)} shows all of the ! Undefined control sequence. l.2874 ...se characters. The fifth table in \code {demo(Hershey)} shows the ! Undefined control sequence. l.2877 Cyrillic has to be selected via a \code {("serif", fontindex)} pair ! Undefined control sequence. l.2894 character is produced by \samp {\bsl{}244\bsl{}241}. ! Undefined control sequence. l.2894 character is produced by \samp{\bsl {}244\bsl{}241}. ! Undefined control sequence. l.2894 ...acter is produced by \samp{\bsl{}244\bsl {}241}. ! Undefined control sequence. l.2898 \samp {\bsl{}\#J1234}. For example, the first Hiragana character is p... ! Undefined control sequence. l.2898 \samp{\bsl {}\#J1234}. For example, the first Hiragana character is p... ! Undefined control sequence. l.2899 by \samp {\bsl{}\#J2421}. ! Undefined control sequence. l.2899 by \samp{\bsl {}\#J2421}. ! Undefined control sequence. l.2903 \samp {\bsl{}\#N1234}. For example, the (obsolete) Kanji for `one' is ! Undefined control sequence. l.2903 \samp{\bsl {}\#N1234}. For example, the (obsolete) Kanji for `one' is ! Undefined control sequence. l.2904 produced by \samp {\bsl{}\#N0001}. ! Undefined control sequence. l.2904 produced by \samp{\bsl {}\#N0001}. ! Undefined control sequence. l.2906 \code {demo(Japanese)} shows the available Japanese characters. ! Undefined control sequence. l.2912 ...via an escape sequence of the form \samp {\bsl{}\#H1234}. ! Undefined control sequence. l.2912 ...n escape sequence of the form \samp{\bsl {}\#H1234}. ! Undefined control sequence. l.2913 ...e, the fleur-de-lys is produced by \samp {\bsl{}\#H0746}. ! Undefined control sequence. l.2913 ...e fleur-de-lys is produced by \samp{\bsl {}\#H0746}. ! Undefined control sequence. l.2914 The sixth and seventh tables of \code {demo(Hershey)} shows all of ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2920 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2922 \begin{References} \relax ! Undefined control sequence. l.2923 \url {https://www.gnu.org/software/plotutils/plotutils.html}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2924 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2926 \begin{SeeAlso} \relax ! Undefined control sequence. l.2927 \code {\LinkA{demo}{demo}(Hershey)}, \code{\LinkA{par}{par}}, ! Undefined control sequence. l.2927 \code{\LinkA {demo}{demo}(Hershey)}, \code{\LinkA{par}{par}}, ! Undefined control sequence. l.2927 \code{\LinkA{demo}{demo}(Hershey)}, \code {\LinkA{par}{par}}, ! Undefined control sequence. l.2927 ...inkA{demo}{demo}(Hershey)}, \code{\LinkA {par}{par}}, ! Undefined control sequence. l.2928 \code {\LinkA{text}{text}}, \code{\LinkA{contour}{contour}}. ! Undefined control sequence. l.2928 \code{\LinkA {text}{text}}, \code{\LinkA{contour}{contour}}. ! Undefined control sequence. l.2928 \code{\LinkA{text}{text}}, \code {\LinkA{contour}{contour}}. ! Undefined control sequence. l.2928 \code{\LinkA{text}{text}}, \code{\LinkA {contour}{contour}}. ! Undefined control sequence. l.2930 \code {\LinkA{Japanese}{Japanese}} for the Japanese characters in the ... ! Undefined control sequence. l.2930 \code{\LinkA {Japanese}{Japanese}} for the Japanese characters in the ... [480]]> [34 ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2931 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2933 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2934 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.2937 # # for tables of examples, see demo(Hershey) ! You can't use `macro parameter character #' in vertical mode. l.2937 ## for tables of examples, see demo(Hershey) ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2938 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2939 \end{Examples} ! Undefined control sequence. l.2940 \HeaderA {hsv}{HSV Color Specification}{hsv} ! Undefined control sequence. l.2941 \keyword {color}{hsv} ! Undefined control sequence. l.2942 \keyword {dplot}{hsv} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2944 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2947 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2949 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2953 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2955 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2956 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2957 \item[\code{h,s,v}] numeric vectors of values in the range \code{[0, ... ! Undefined control sequence. l.2957 ...ric vectors of values in the range \code {[0, 1]} for ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2961 \item[\code{alpha}] numeric vector of values in the range \code{[0, 1... ! Undefined control sequence. l.2961 ...eric vector of values in the range \code {[0, 1]} for ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2963 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2964 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2966 \begin{Details} \relax ! Undefined control sequence. l.2967 Semi-transparent colors (\code {0 < alpha < 1}) are supported only on ! Undefined control sequence. l.2968 some devices: see \code {\LinkA{rgb}{rgb}}. ! Undefined control sequence. l.2968 some devices: see \code{\LinkA {rgb}{rgb}}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2969 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2971 \begin{Value} ! Undefined control sequence. l.2973 ...HSV space. The values returned by \code {hsv} can be ! Undefined control sequence. l.2974 used with a \code {col=} specification in graphics functions or in ! Undefined control sequence. l.2975 \code {par}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2976 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2978 \begin{SeeAlso} \relax ! Undefined control sequence. l.2979 \code {\LinkA{hcl}{hcl}} for a perceptually based version of \code{hsv... ! Undefined control sequence. l.2979 \code{\LinkA {hcl}{hcl}} for a perceptually based version of \code{hsv... ! Undefined control sequence. l.2979 ...or a perceptually based version of \code {hsv()}, ! Undefined control sequence. l.2980 \code {\LinkA{rgb}{rgb}} and \code{\LinkA{rgb2hsv}{rgb2hsv}} for RGB t... ! Undefined control sequence. l.2980 \code{\LinkA ] for immediate help. ... l.2983 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2985 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2986 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.2991 # # Red tones: ! You can't use `macro parameter character #' in vertical mode. l.2991 ## Red tones: ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.2999 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3000 \end{Examples} ! Undefined control sequence. l.3001 \HeaderA {Japanese}{Japanese characters in R}{Japanese} ! Undefined control sequence. l.3002 \keyword {aplot}{Japanese} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3004 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3007 \end{Description} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3009 \begin{Details} \relax ! Undefined control sequence. l.3012 \code {\LinkA{Hershey}{Hershey}}. ! Undefined control sequence. l.3012 \code{\LinkA {Hershey}{Hershey}}. ! Undefined control sequence. l.3015 by \samp {\bsl{}\#J242b} and the Katakana character for this sound is ! Undefined control sequence. l.3015 by \samp{\bsl {}\#J242b} and the Katakana character for this sound is ! Undefined control sequence. l.3016 produced by \samp {\bsl{}\#J252b}. The Kanji ideograph for "one" is ! Undefined control sequence. l.3016 produced by \samp{\bsl {}\#J252b}. The Kanji ideograph for "one" is ! Undefined control sequence. l.3017 produced by \samp {\bsl{}\#J306c} or \samp{\bsl{}\#N0001}. ! Undefined control sequence. l.3017 produced by \samp{\bsl {}\#J306c} or \samp{\bsl{}\#N0001}. ! Undefined control sequence. l.3017 produced by \samp{\bsl{}\#J306c} or \samp {\bsl{}\#N0001}. ! Undefined control sequence. l.3017 ...ed by \samp{\bsl{}\#J306c} or \samp{\bsl {}\#N0001}. ! Undefined control sequence. l.3019 The output from \code {\LinkA{demo}{demo}(Japanese)} shows tables of t... ! Undefined control sequence. l.3019 The output from \code{\LinkA {demo}{demo}(Japanese)} shows tables of t... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3021 \end{Details} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3023 \begin{References} \relax ! Undefined control sequence. l.3024 \url {https://www.gnu.org/software/plotutils/plotutils.html} ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3025 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3027 \begin{SeeAlso} \relax ! Undefined control sequence. l.3028 \code {\LinkA{demo}{demo}(Japanese)}, \code{\LinkA{Hershey}{Hershey}},... ! Undefined control sequence. l.3028 \code{\LinkA {demo}{demo}(Japanese)}, \code{\LinkA{Hershey}{Hershey}},... ! Undefined control sequence. l.3028 \code{\LinkA{demo}{demo}(Japanese)}, \code {\LinkA{Hershey}{Hershey}},... ! Undefined control sequence. l.3028 ...nkA{demo}{demo}(Japanese)}, \code{\LinkA {Hershey}{Hershey}}, \code... ! Undefined control sequence. l.3028 ..., \code{\LinkA{Hershey}{Hershey}}, \code {\LinkA{text}{text}} ! Undefined control sequence. l.3028 ...{\LinkA{Hershey}{Hershey}}, \code{\LinkA {text}{text}} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3029 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3031 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3032 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 3019--3034 []\OT1/cmr/m/n/10 The out-put from de-modemo(Japanese) shows ta-bles of Underfull \hbox (badness 10000) in paragraph at lines 3019--3034 \OT1/cmr/m/n/10 the es-cape se-quences for the avail-able Japanese char-ac-ters . ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3049 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3050 \end{Examples} ! Undefined control sequence. l.3051 \HeaderA {make.rgb}{Create colour spaces }{make.rgb} ! Undefined control sequence. l.3052 \aliasA {colorConverter}{make.rgb}{colorConverter} ! Undefined control sequence. l.3053 \keyword {color}{make.rgb} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3055 \begin{Description} \relax ! Undefined control sequence. l.3057 \code {\LinkA{convertColor}{convertColor}}. ! Undefined control sequence. l.3057 \code{\LinkA {convertColor}{convertColor}}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3058 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3060 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 3040--3061 []\OT1/cmr/m/n/10 text(4, 2, "#J244b#J245b#J2473", vfont = Vf) text(4, 4, [481 [-3] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3067 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3069 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3070 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3071 \item[\code{red,green,blue}] Chromaticity (xy or xyY) of RGB primaries ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3072 \item[\code{name}] Name for the colour space ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3073 \item[\code{white}] Character string specifying the reference white (see ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3075 \item[\code{gamma}] Display gamma (nonlinearity). A positive number o... ! Undefined control sequence. l.3076 string \code {"sRGB"} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3077 \item[\code{fromXYZ}] Function to convert from XYZ tristimulus coordi... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3079 \item[\code{toXYZ}] Function to convert from this space to XYZ tristi... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3081 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3082 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3084 \begin{Details} \relax ! Undefined control sequence. l.3094 to a gamma of 2.2; \code {gamma = "sRGB"} uses this function. ! Undefined control sequence. l.3102 be ignored and may be \code {...}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3103 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3105 \begin{Value} ! Undefined control sequence. l.3106 An object of class \code {colorConverter} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3107 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3109 \begin{References} \relax ! Undefined control sequence. l.3110 Conversion algorithms from \url {http://www.brucelindbloom.com}. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3111 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3113 \begin{SeeAlso} \relax ! Undefined control sequence. l.3114 \code {\LinkA{convertColor}{convertColor} ! Undefined control sequence. l.3114 \code{\LinkA {convertColor}{convertColor} ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3116 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3118 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3119 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.3125 # # converter for sRGB in #rrggbb format ! You can't use `macro parameter character #' in vertical mode. l.3125 ## converter for sRGB in #rrggbb format ! You can't use `macro parameter character #' in horizontal mode. l.3125 ## converter for sRGB in # rrggbb format ! You can't use `macro parameter character #' in horizontal mode. l.3135 ... white = "D65", name = "# rrggbb") ! You can't use `macro parameter character #' in vertical mode. l.3141 # # must make hex a matrix before using it ! You can't use `macro parameter character #' in vertical mo]de. l.3141 ## must make hex a matrix before using it ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3145 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3146 \end{Examples} ! Undefined control sequence. l.3147 \HeaderA {n2mfrow}{Compute Default mfrow From Number of Plots}{n2mfrow} ! Undefined control sequence. l.3148 \keyword {dplot}{n2mfrow} ! Undefined control sequence. l.3149 \keyword {utilities}{n2mfrow} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3151 \begin{Description} \relax ! Undefined control sequence. l.3154 \code {\LinkA{par}{par}(mfrow)}. ! Undefined control sequence. l.3154 \code{\LinkA {par}{par}(mfrow)}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3155 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3157 \begin{Usage} Underfull \hbox (badness 10000) in paragraph at lines 3141--3158 []\OT1/cmr/m/n/10 must make hex a ma-trix be-fore us-ing it (cc <- ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3161 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3163 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3164 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3165 \item[\code{nr.plots}] integer; the number of plot figures you'll wan... ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3166 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3167 \end{Arguments} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3169 \begin{Value} ! Undefined control sequence. l.3170 A length two integer vector \code {nr, nc} giving the number of rows ! Undefined control sequence. l.3171 and columns, fulfilling \code {nr >= nc >= 1} and \code{nr * nc >= nr.... ! Undefined control sequence. l.3171 ...ulfilling \code{nr >= nc >= 1} and \code {nr * nc >= nr.plots}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3172 \end{Value} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3174 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3176 \end{Author} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3178 \begin{SeeAlso} \relax ! Undefined control sequence. l.3179 \code {\LinkA{par}{par}}, \code{\LinkA{layout}{layout}}. ! Undefined control sequence. l.3179 \code{\LinkA {par}{par}}, \code{\LinkA{layout}{layout}}. ! Undefined control sequence. l.3179 \code{\LinkA{par}{par}}, \code {\LinkA{layout}{layout}}. ! Undefined control sequence. l.3179 \code{\LinkA{par}{par}}, \code{\LinkA {layout}{layout}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3180 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3182 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3183 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3186 n2mfrow(8) # 3 x 3 ! You can't use `macro parameter character #' in horizontal mode. l.3189 # # suppose now that 'n' is not known {inside function} ! You can't use `macro parameter character #' in horizontal mode. l.3189 ## suppose now that 'n' is not known {inside function} ! Missing $ inserted. $ l.3192 plot(x, x^ j, main = substitute(x^ exp, list(exp = j)), type = "l", ! Missing $ inserted. $ l.3194 ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3196 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3197 \end{Examples} ! Undefined control sequence. l.3198 \HeaderA {nclass}{Compute the Number of Classes for a Histogram}{nclass} ! Undefined control sequence. l.3199 \methaliasA {nclass.FD}{nclass}{nclass.FD} ! Undefined control sequence. l.3200 \methaliasA {nclass.scott}{nclass}{nclass.scott} ! Undefined control sequence. l.3201 \methaliasA {nclass.Sturges}{nclass}{nclass.Sturges} ! Undefined control sequence. l.3202 \keyword {univar}{nclass} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3204 \begin{Description} \relax ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3206 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3208 \begin{Usage} Underfull \hbox (badness 6348) in paragraph at lines 3195--3209 []\OT1/cmr/m/n/10 sapply(1:10, n2mfrow) nclass-Com-pute the Num-ber of Classe s [482]) [-4 ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3214 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3216 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3217 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3218 \item[\code{x}] a data vector. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3219 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3220 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3222 \begin{Details} \relax ! Undefined control sequence. l.3223 \code {nclass.Sturges} uses Sturges' formula, implicitly basing bin ! Undefined control sequence. l.3226 \code {nclass.scott} uses Scott's choice for a normal distribution bas... ! Undefined control sequence. l.3228 returns \code {1}. ! Undefined control sequence. l.3230 \code {nclass.FD} uses the Freedman-Diaconis choice based on the ! Undefined control sequence. l.3231 inter-quartile range (\code {\LinkA{IQR}{IQR}(signif(x, 5))}) unless t... ! Undefined control sequence. l.3231 inter-quartile range (\code{\LinkA {IQR}{IQR}(signif(x, 5))}) unless t... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3235 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3237 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3239 \end{Value} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3241 \begin{References} \relax ! Undefined control sequence. l.3247 ...e histogram as a density estimator: \eqn {L_2}{} theory. ! Missing $ inserted. $ l.3247 ...istogram as a density estimator: \eqn{L_ 2}{} theory. ! Extra }, or forgotten $. l.3247 ...togram as a density estimator: \eqn{L_2} {} theory. ! Undefined control sequence. l.3249 und verwandte Gebiete} \bold {57}, 453--476. ! Missing $ inserted. $ l.3250 Underfull \hbox (badness 10000) in paragraph at lines 3246--3250 []\OT1/cmr/m/n/10 Freedman, D. and Di-a-co-nis, P. (1981) Underfull \hbox (badness 10000) in paragraph at lines 3246--3250 \OT1/cmr/m/n/10 On the his-togram as a den-sity es-ti-ma-tor: Overfull \hbox (12.92526pt too wide) in paragraph at lines 3246--3250 \OT1/cmr/m/n/10 L$[][]\OML/cmm/m/it/10 theory:[][]; \OT1/cmr/m/n/10 453 \OMS/cm sy/m/n/10 ^^@ ! Undefined control sequence. l.3252 \emph{Biometrika} \bold {66}, 605--610. ! Undefined control sequence. l.3259 ... American Statistical Association} \bold {21}, 65--66. ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3260 \end{References} ! Missing } inserted. } l.3260 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3262 \begin{SeeAlso} \relax ! Undefined control sequence. l.3263 \code {\LinkA{hist}{hist}} and \code{\LinkA{truehist}{truehist}} (package ! Undefined control sequence. l.3263 \code{\LinkA {hist}{hist}} and \code{\LinkA{truehist}{truehist}} (package ! Undefined control sequence. l.3263 \code{\LinkA{hist}{hist}} and \code {\LinkA{truehist}{truehist}} (package ! Undefined control sequence. l.3263 \code{\LinkA{hist}{hist}} and \code{\LinkA {truehist}{truehist}} (package ! Undefined control sequence. l.3264 \Rhref {https://CRAN.R-project.org/package=MASS}{\pkg{MASS}}); \code{... ! Undefined control sequence. l.3264 ...://CRAN.R-project.org/package=MASS}{\pkg {MASS}}); \code{\LinkA{dp... ! Undefined control sequence. l.3264 ...t.org/package=MASS}{\pkg{MASS}}); \code {\LinkA{dpih}{dpih}} (package ! Undefined control sequence. l.3264 ...ackage=MASS}{\pkg{MASS}}); \code{\LinkA {dpih}{dpih}} (package ! Undefined control sequence. l.3265 \Rhref {https://CRAN.R-project.org/package=KernSmooth}{\pkg{KernSmooth... ! Undefined control sequence. l.3265 ...N.R-project.org/package=KernSmooth}{\pkg {KernSmooth}}) for a plugi... ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3266 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3268 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3269 \begin{ExampleCode} ! You can't use `macro parameter character #' in vertical mode. l.3274 # # Compare them: ! You can't use `macro parameter character #' in vertical mode. l.3274 ## Compare them: ! You can't use `macro parameter character #' in horizontal mode. l.3279 NC(onePt) # no longer gives NaN ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3280 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3281 \end{Examples} ! Undefined control sequence. l.3282 \HeaderA {palette}{Set or View the Graphics Palette}{palette} ! Undefined control sequence. l.3283 \keyword {color}{palette} ! Undefined control sequence. l.3284 \keyword {sysdata}{palette} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3286 \begin{Description} \relax ! Undefined control sequence. l.3287 ...color palette which is used when a \code {col=} ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3289 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3291 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3295 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3297 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3298 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3299 \item[\code{value}] an optional character vector. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3300 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX ] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.tocmanual or LaTeX Companion for explanation. Type H for immediate help. ... l.3301 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3303 \begin{Details} \relax ! Undefined control sequence. l.3305 e.g.~\code {\LinkA{par}{par}}) was provided for compatibility with S: ... ! Undefined control sequence. l.3305 e.g.~\code{\LinkA {par}{par}}) was provided for compatibility with S: ... ! Undefined control sequence. l.3305 ...provided for compatibility with S: in \R {} ! Undefined control sequence. l.3308 If \code {value} has length 1, it is taken to be the name of a built-in ! Undefined control sequence. l.3309 color palette (only \code {"default"} is built-in currently). If ! Undefined control sequence. l.3310 \code {value} has length greater than 1 it is assumed to contain a ! Undefined control sequence. l.3315 If \code {value} is omitted, no change is made to the current palette. ! Undefined control sequence. l.3317 ... palette setting for all devices in a \R {} session. If ! Undefined control sequence. l.3322 on-screen device is resized or \code {\LinkA{dev.copy}{dev.copy}} or ! Undefined control sequence. l.3322 on-screen device is resized or \code{\LinkA {dev.copy}{dev.copy}} or ! Undefined control sequence. l.3323 \code {\LinkA{replayPlot}{replayPlot}} is used). The palette is recor... ! Undefined control sequence. l.3323 \code{\LinkA {replayPlot}{replayPlot}} is used). The palette is recor... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3325 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3327 \begin{Value} ! Undefined control sequence. l.3329 This is \code {\LinkA{invisible}{invisible}} unless the argument is om... ! Undefined control sequence. l.3329 This is \code{\LinkA {invisible}{invisible}} unless the argument is om... ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3330 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3332 \begin{SeeAlso} \relax ! Undefined control sequence. l.3333 \code {\LinkA{colors}{colors}} for the vector of built-in named colors; ! Undefined control sequence. l.3333 \code{\LinkA {colors}{colors}} for the vector of built-in named colors; ! Undefined control sequence. l.3334 \code {\LinkA{hsv}{hsv}}, \code{\LinkA{gray}{gray}}, \code{\LinkA{rain... ! Undefined control sequence. l.3334 \code{\LinkA {hsv}{hsv}}, \code{\LinkA{gray}{gray}}, \code{\LinkA{rain... ! Undefined control sequence. l.3334 \code{\LinkA{hsv}{hsv}}, \code {\LinkA{gray}{gray}}, \code{\LinkA{rain... ! Undefined control sequence. l.3334 \code{\LinkA{hsv}{hsv}}, \code{\LinkA {gray}{gray}}, \code{\LinkA{rain... ! Undefined control sequence. l.3334 ...{hsv}}, \code{\LinkA{gray}{gray}}, \code {\LinkA{rainbow}{rainbow}}, ! Undefined control sequence. l.3334 ... \code{\LinkA{gray}{gray}}, \code{\LinkA {rainbow}{rainbow}}, ! Undefined control sequence. l.3335 \code {\LinkA{terrain.colors}{terrain.colors}}, \dots to construct col... ! Undefined control sequence. l.3335 \code{\LinkA {terrain.colors}{terrain.colors}}, \dots to construct col... [483) (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.toc] ! Undefined control sequence. l.3337 \code {\LinkA{adjustcolor}{adjustcolor}}, e.g., for tweaking existing ... ! Undefined control sequence. l.3337 \code{\LinkA {adjustcolor}{adjustcolor}}, e.g., for tweaking existing ... ! Undefined control sequence. l.3338 \code {\LinkA{colorRamp}{colorRamp}} to interpolate colors, making cus... ! Undefined control sequence. l.3338 \code{\LinkA {colorRamp}{colorRamp}} to interpolate colors, making cus... ! Undefined control sequence. l.3339 \code {\LinkA{col2rgb}{col2rgb}} for translating colors to RGB 3-vectors. ! Undefined control sequence. l.3339 \code{\LinkA {col2rgb}{col2rgb}} for translating colors to RGB 3-vectors. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3340 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3342 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3343 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3346 palette() # obtain the current palette ! You can't use `macro parameter character #' in horizontal mode. l.3347 palette(rainbow(6)) # six color rainbow ! You can't use `macro parameter character #' in horizontal mode. l.3349 (palette(gray(seq(0,.9,len = 25)))) # gray scales; print old palette ! You can't use `macro parameter character #' in horizontal mode. l.3353 palette("default") # reset back to the default ! You can't use `macro parameter character #' in vertical mode. l.3355 # # on a device where alpha-transparency is supported, ! You can't use `macro parameter character #' in vertical mode. l.3355 ## on a device where alpha-transparency is supported, ! You can't use `macro parameter character #' in horizontal mode. l.3356 # # use 'alpha = 0.3' transparency with the default palette : ! You can't use `macro parameter character #' in horizontal mode. l.3356 ## use 'alpha = 0.3' transparency with the default palette : ! Undefined control sequence. l.3361 main = "Alpha-Transparency Palette\n alpha = 0.3") ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3365 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3366 \end{Examples} ! Undefined control sequence. l.3367 \HeaderA {Palettes}{Color Palettes}{Palettes} ! Undefined control sequence. l.3368 \aliasA {cm.colors}{Palettes}{cm.colors} ! Undefined control sequence. l.3369 \aliasA {heat.colors}{Palettes}{heat.colors} ! Undefined control sequence. l.3370 \aliasA {rainbow}{Palettes}{rainbow} ! Undefined control sequence. l.3371 \aliasA {terrain.colors}{Palettes}{terrain.colors} ! Undefined control sequence. l.3372 \aliasA {topo.colors}{Palettes}{topo.colors} ! Undefined control sequence. l.3373 \keyword {color}{Palettes} ! Undefined control sequence. l.3374 \keyword {dplot}{Palettes} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3376 \begin{Description} \relax ! Undefined control sequence. l.3377 Create a vector of \code {n} contiguous colors. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3378 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3380 \begin{Usage} Underfull \hbox (badness 4048) in paragraph at lines 3355--3381 []\OT1/cmr/m/n/10 on a de-vice where alpha-transparency is sup-ported, use 'al -pha Underfull \hbox (badness 5175) in paragraph at lines 3355--3381 \OT1/cmr/m/n/10 = 0.3' trans-parency with the de-fault palette : my-cols <- ad- just- Underfull \hbox (badness 1152) in paragraph at lines 3355--3381 \OT1/cmr/m/n/10 color(palette(), al-pha.f = 0.3) opal <- palette(mycols) x <- r norm(1000); Underfull \hbox (badness 1303) in paragraph at lines 3355--3381 \OT1/cmr/m/n/10 Transparency Palet-teal-pha = 0.3") xy[,1] <- -xy[,1] points(xy , col = 8, Underfull \hbox (badness 1762) in paragraph at lines 3355--3381 \OT1/cmr/m/n/10 bow ter-rain.colorsPalettesterrain.colors topo.colorsPalettesto po.colors col-or- Overfull \hbox (17.24684pt too wide) in paragraph at lines 3387--3387 []\OT1/cmtt/m/n/10 rainbow(n, s = 1, v = 1, start = 0, end = max(1, n - 1)/n, a lpha = 1)[] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3388 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3390 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3391 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3392 \item[\code{n}] the number of colors (\eqn{\ge 1}{}) to be in the ! Undefined control sequence. l.3392 \item[\code{n}] the number of colors (\eqn {\ge 1}{}) to be in the ! Missing $ inserted. $ l.3392 ...\code{n}] the number of colors (\eqn{\ge 1}{}) to be in the ! Extra }, or forgotten $. l.3392 ...de{n}] the number of colors (\eqn{\ge 1} {}) to be in the ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3394 \item [\code{s, v}] the `saturation' and `value' to be used ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3394 \item[\code{s, v}] the `saturation' and `value' to be used ! LaTeX Error: Something's wrong--perhaps a missing \item. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3394 \item[\code{s, v}] the `saturation' and `value' to be used ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3394 \item[\code{s, v}] the `saturation' and `value' to be used ! LaTeX Error: Command \item invalid in math mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3396 \item [\code{start}] the (corrected) hue in [0,1] at which the rainbow ! Missing $ inserted. $ l.3396 \item[\code{start}] the (corrected) hue in [0,1] at which the rainbow Overfull \hbox (171.70967pt too wide) in paragraph at lines 3392--3396 []\OT1/cmr/m/n/10 the num-ber of col-ors ($\OMS/cmsy/m/n/10 ^^U \OT1/cmr/m/n/10 1[])\OML/cmm/m/it/10 tobeinthepalette:the\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 sat uration[]and\OT1/cmr/m/n/10 `\OML/cmm/m/it/10 value[]tobeusedtocompletetheHSVco lordescriptions:[]$ ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3396 \item[\code{start}] the (corrected) hue in [0,1] at which the rainbow ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3398 \item[\code{end}] the (corrected) hue in [0,1] at which the rainbow e... ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3399 \item[\code{alpha}] the alpha transparency, a number in [0,1], see ar... ! Undefined control sequence. l.3400 \code {alpha} in \code{\LinkA{hsv}{hsv}}. ! Undefined control sequence. l.3400 \code{alpha} in \code {\LinkA{hsv}{hsv}}. ! Undefined control sequence. l.3400 \code{alpha} in \code{\LinkA {hsv}{hsv}}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3401 \end{ldescription} ! Missing } inserted. } l.3401 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3402 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3404 \begin{Details} \relax ! Undefined control sequence. l.3407 \code {\LinkA{hsv}{hsv}(h, s, v)}, and hence ! Undefined control sequence. l.3407 \code{\LinkA {hsv}{hsv}(h, s, v)}, and hence ! Undefined control sequence. l.3415 With \code {rainbow}, the parameters \code{start} and \code{end} can b... ! Undefined control sequence. l.3415 With \code{rainbow}, the parameters \code {start} and \code{end} can b... ! Undefined control sequence. l.3415 ...}, the parameters \code{start} and \code {end} can be used ! Undefined control sequence. l.3418 red = 0, yellow = \eqn {\frac 1 6}{}, green = \eqn{\frac 2 6}{}, ! Missing $ inserted. $ l.3418 red = 0, yellow = \eqn{\frac 1 6 }{}, green = \eqn{\frac 2 6}{}, ! Extra }, or forgotten $. \frac #1#2->{\begingroup #1\endgroup \over #2} l.3418 red = 0, yellow = \eqn{\frac 1 6 }{}, green = \eqn{\frac 2 6}{}, ! Extra }, or forgotten $. l.3418 red = 0, yellow = \eqn{\frac 1 6} {}, green = \eqn{\frac 2 6}{}, ! Undefined control sequence. l.3418 ...yellow = \eqn{\frac 1 6}{}, green = \eqn {\frac 2 6}{}, ! Undefined control sequence. l.3419 cyan = \eqn {\frac 3 6}{}, blue = \eqn{\frac 4 6}{} ! Undefined control sequence. l.3419 cyan = \eqn{\frac 3 6}{}, blue = \eqn {\frac 4 6}{} ! Undefined control sequence. l.3420 and magenta = \eqn {\frac 5 6}{}. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3421 \end{Details} ! Missing $ inserted. $ l.3421 \end{Details} ! Missing } inserted. } l.3421 \end{Details} ! Missing } inserted. } l.3421 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3423 \begin{Value} ! Undefined control sequence. l.3424 A character vector, \code {cv}, of color names. This can be used ! Undefined control sequence. l.3426 graphics by \code {\LinkA{palette}{palette}(cv)}, a \code{col =} speci... ! Undefined control sequence. l.3426 graphics by \code{\LinkA {palette}{palette}(cv)}, a \code{col =} speci... ! Undefined control sequence. l.3426 ...e{\LinkA{palette}{palette}(cv)}, a \code {col =} specification ! Undefined control sequence. l.3427 in graphics functions or in \code {par}. ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3428 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3430 \begin{SeeAlso} \relax ! Undefined control sequence. l.3431 \code {\LinkA{colors}{colors}}, \code{\LinkA{palette}{palette}}, \code... ! Undefined control sequence. l.3431 \code{\LinkA {colors}{colors}}, \code{\LinkA{palette}{palette}}, \code... ! Undefined control sequence. l.3431 \code{\LinkA{colors}{colors}}, \code {\LinkA{palette}{palette}}, \code... ! Undefined control sequence. l.3431 \code{\LinkA{colors}{colors}}, \code{\LinkA {palette}{palette}}, \code... ! Undefined control sequence. l.3431 ..., \code{\LinkA{palette}{palette}}, \code {\LinkA{hsv}{hsv}}, ! Undefined control sequence. l.3431 ...{\LinkA{palette}{palette}}, \code{\LinkA {hsv}{hsv}}, ! Undefined control sequence. l.3432 \code {\LinkA{hcl}{hcl}}, \code{\LinkA{rgb}{rgb}}, \code{\LinkA{gray}{... ! Undefined control sequence. l.3432 \code{\LinkA {hcl}{hcl}}, \code{\LinkA{rgb}{rgb}}, \code{\LinkA{gray}{... ! Undefined control sequence. l.3432 \code{\LinkA{hcl}{hcl}}, \code {\LinkA{rgb}{rgb}}, \code{\LinkA{gray}{... ! Undefined control sequence. l.3432 \code{\LinkA{hcl}{hcl}}, \code{\LinkA {rgb}{rgb}}, \code{\LinkA{gray}{... ! Undefined control sequence. l.3432 ...l}{hcl}}, \code{\LinkA{rgb}{rgb}}, \code {\LinkA{gray}{gray}} and ! Undefined control sequence. l.3432 ...}, \code{\LinkA{rgb}{rgb}}, \code{\LinkA {gray}{gray}} and ! Undefined control sequence. l.3433 \code {\LinkA{col2rgb}{col2rgb}} for translating to RGB numbers. ! Undefined control sequence. l.3433 \code{\LinkA {col2rgb}{col2rgb}} for translating to RGB numbers. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3434 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3436 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3437 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3439 # A Color Wheel ! You can't use `macro parameter character #' in vertical mode. l.3442 # #------ Some palettes ------------ ! You can't use `macro parameter character #' in vertical mode. l.3442 ## ------ Some palettes ------------ ! You can't use `macro parameter character #' in horizontal mode. l.3460 # Since for screen, larger n may give color allocation problem ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3462 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3463 \end{Examples} ! Undefined control sequence. l.3464 \HeaderA {pdf}{PDF Graphics Device}{pdf} ! Undefined control sequence. l.3465 \keyword {device}{pdf} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3467 \begin{Description} \relax ! Undefined control sequence. l.3468 \code {pdf} starts the graphics device driver for producing PDF ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3470 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3472 \begin{Usage} Underfull \hbox (badness 1087) in paragraph at lines 3442--3473 \OT1/cmr/m/n/10 = c("rainbow(n, start=.7, end=.1)", "heat.colors(n)", "ter-rain .colors(n)", [484) (Acknowledgements) Chapter 1 [1]] ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3479 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3481 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3482 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3483 \item[\code{file}] a character string giving the name of the file. ! Undefined control sequence. l.3484 If it is of the form \code {"|cmd"}, the output is piped to the ! Undefined control sequence. l.3485 command given by \command {cmd}. If it is \code{NULL}, ! Undefined control sequence. l.3485 ... given by \command{cmd}. If it is \code {NULL}, ! Undefined control sequence. l.3489 For use with \code {onefile = FALSE} give a C integer format such ! Undefined control sequence. l.3490 as \code {"Rplot\%03d.pdf"} (the default in that case). ! Undefined control sequence. l.3491 (See \code {\LinkA{postscript}{postscript}} for further details.) ! Undefined control sequence. l.3491 (See \code{\LinkA {postscript}{postscript}} for further details.) Underfull \hbox (badness 2478) in paragraph at lines 3489--3492 []\OT1/cmr/m/n/10 For use with one-file = FALSE give a C in-te-ger for-mat such as ! Undefined control sequence. l.3493 Tilde expansion (see \code {\LinkA{path.expand}{path.expand}}) is done. ! Undefined control sequence. l.3493 Tilde expansion (see \code{\LinkA {path.expand}{path.expand}}) is done. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3495 \item[\code{width, height}] the width and height of the graphics regi... ! Undefined control sequence. l.3496 inches. The default values are \code {7}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3497 \item[\code{onefile}] logical: if true (the default) allow multiple f... ! Undefined control sequence. l.3499 number for each page. Defaults to \code {TRUE}, and forced to true ! Undefined control sequence. l.3500 if \code {file} is a pipe. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3501 \item[\code{family}] the font family to be used, see ! Undefined control sequence. l.3502 \code {\LinkA{postscript}{postscript}}. Defaults to \code{"Helvetica"}. ! Undefined control sequence. l.3502 \code{\LinkA {postscript}{postscript}}. Defaults to \code{"Helvetica"}. ! Undefined control sequence. l.3502 ...script}{postscript}}. Defaults to \code {"Helvetica"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3503 \item[\code{title}] title string to embed as the \samp{/Title} field ... ! Undefined control sequence. l.3503 ...tle}] title string to embed as the \samp {/Title} field in the ! Undefined control sequence. l.3504 file. Defaults to \code {"R Graphics Output"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3505 \item[\code{fonts}] a character vector specifying \R{} graphics font ... ! Undefined control sequence. l.3505 ...fonts}] a character vector specifying \R {} graphics font family ! Undefined control sequence. l.3507 Defaults to \code {NULL}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3508 \item[\code{version}] a string describing the PDF version that will be ! Undefined control sequence. l.3510 ...arning) if necessary. Defaults to \code {"1.4"}, ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3512 \item[\code{paper}] the target paper size. The choices are ! Undefined control sequence. l.3513 \code {"a4"}, \code{"letter"}, \code{"legal"} (or \code{"us"}) and ! Undefined control sequence. l.3513 \code{"a4"}, \code {"letter"}, \code{"legal"} (or \code{"us"}) and ! Undefined control sequence. l.3513 \code{"a4"}, \code{"letter"}, \code {"legal"} (or \code{"us"}) and ! Undefined control sequence. l.3513 ...code{"letter"}, \code{"legal"} (or \code {"us"}) and ! Undefined control sequence. l.3514 \code {"executive"} (and these can be capitalized), or \code{"a4r"} ! Undefined control sequence. l.3514 ...(and these can be capitalized), or \code {"a4r"} ! Undefined control sequence. l.3515 and \code {"USr"} for rotated (`landscape'). ! Undefined control sequence. l.3516 The default is \code {"special"}, which means that the \code{width} ! Undefined control sequence. l.3516 ...e{"special"}, which means that the \code {width} ! Undefined control sequence. l.3517 and \code {height} specify the paper size. A further choice is ! Undefined control sequence. l.3518 \code {"default"}; if this is selected, the ! Undefined control sequence. l.3519 papersize is taken from the option \code {"papersize"} ! Undefined control sequence. l.3520 if that is set and as \code {"a4"} if it is unset o [2r empty. ! Undefined control sequence. l.3521 Defaults to \code {"special"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3523 \item[\code{encoding}] the name of an encoding file. See ! Undefined control sequence. l.3524 \code {\LinkA{postscript}{postscript}} for details. Defaults to \code... ! Undefined control sequence. l.3524 \code{\LinkA {postscript}{postscript}} for details. Defaults to \code... ! Undefined control sequence. l.3524 ...script}} for details. Defaults to \code {"default"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3525 \item[\code{bg}] the initial background color to be used. Defaults to ! Undefined control sequence. l.3526 \code {"transparent"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3527 \item[\code{fg}] the initial foreground color to be used. Defaults to ! Undefined control sequence. l.3528 \code {"black"}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3529 \item[\code{pointsize}] the default point size to be used. Strictly ! Undefined control sequence. l.3531 points. Defaults to \code {12}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3532 \item[\code{pagecentre}] logical: should the device region be centred... ! Undefined control sequence. l.3533 page? -- is only relevant for \code {paper != "special"}. ! Undefined control sequence. l.3534 Defaults to \code {TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3535 \item[\code{colormodel}] a character string describing the color model: ! Undefined control sequence. l.3536 currently allowed values are \code {"srgb"}, \code{"gray"} (or ! Undefined control sequence. l.3536 ... allowed values are \code{"srgb"}, \code {"gray"} (or ! Undefined control sequence. l.3537 \code {"grey"}) and \code{"cmyk"}. Defaults to \code{"srgb"}. See se... ! Undefined control sequence. l.3537 \code{"grey"}) and \code {"cmyk"}. Defaults to \code{"srgb"}. See se... ! Undefined control sequence. l.3537 ...}) and \code{"cmyk"}. Defaults to \code {"srgb"}. See section [485]] ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3539 \item[\code{useDingbats}] logical. Should small circles be rendered ! Undefined control sequence. l.3540 ...a} the Dingbats font? Defaults to \code {TRUE}, which produces ! Undefined control sequence. l.3541 ...nd better output. Setting this to \code {FALSE} can work ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3547 \item[\code{useKerning}] logical. Should kerning corrections be incl... ! Undefined control sequence. l.3548 ...lating string widths? Defaults to \code {TRUE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3549 \item[\code{fillOddEven}] logical controlling the polygon fill mode: ... ! Undefined control sequence. l.3550 \code {\LinkA{polygon}{polygon}} for details. Defaults to \code{FALSE}. ! Undefined control sequence. l.3550 \code{\LinkA {polygon}{polygon}} for details. Defaults to \code{FALSE}. ! Undefined control sequence. l.3550 ...olygon}} for details. Defaults to \code {FALSE}. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3551 \item[\code{compress}] logical. Should PDF streams be generated with... ! Undefined control sequence. l.3552 compression? Defaults to \code {TRUE}. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3553 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3554 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3556 \begin{Details} \relax ! Undefined control sequence. l.3557 All arguments except \code {file} default to values given by ! Undefined control sequence. l.3558 \code {\LinkA{pdf.options}{pdf.options}()}. The ultimate defaults are... ! Undefined control sequence. l.3558 \code{\LinkA {pdf.options}{pdf.options}()}. The ultimate defaults are... ! Undefined control sequence. l.3561 \code {pdf()} opens the file \code{file} and the PDF commands needed to ! Undefined control sequence. l.3561 \code{pdf()} opens the file \code {file} and the PDF commands needed to ! Undefined control sequence. l.3564 The \code {file} argument is interpreted as a C integer format as used ! Undefined control sequence. l.3565 by \code {\LinkA{sprintf}{sprintf}}, with integer argument the page nu... ! Undefined control sequence. l.3565 by \code{\LinkA {sprintf}{sprintf}}, with integer argument the page nu... ! Undefined control sequence. l.3566 The default gives files \file {Rplot001.pdf}, \dots, \file{Rplot999.pdf}, ! Undefined control sequence. l.3566 ... files \file{Rplot001.pdf}, \dots, \file {Rplot999.pdf}, ! Undefined control sequence. l.3567 \file {Rplot1000.pdf}, \dots. ! Undefined control sequence. l.3569 The \code {family} argument can be used to specify a PDF-specific ! Undefined control sequence. l.3572 \code {fonts} argument. ! Undefined control sequence. l.3574 If a device-independent \R {} graphics font family is specified (e.g.,... ! Undefined control sequence. l.3575 \code {par(family = )} in the graphics package), the PDF device makes use ! Undefined control sequence. l.3576 ...stScript font mappings to convert the \R {} graphics font family ! Undefined control sequence. l.3578 documentation for \code {\LinkA{pdfFonts}{pdfFonts}}.) ! Undefined control sequence. l.3578 documentation for \code{\LinkA {pdfFonts}{pdfFonts}}.) ! Undefined control sequence. l.3582 ...to be available in any PDF viewer: \code {"Times"} ! Undefined control sequence. l.3583 (equivalently \code {"serif"}), \code{"Helvetica"} (equivalently ! Undefined control sequence. l.3583 (equivalently \code{"serif"}), \code {"Helvetica"} (equivalently ! Undefined control sequence. l.3584 \code {"sans"}) and \code{"Courier"} (equivalently \code{"mono"}). ! Undefined control sequence. l.3584 \code{"sans"}) and \code {"Courier"} (equivalently \code{"mono"}). ! Undefined control sequence. l.3584 ...and \code{"Courier"} (equivalently \code {"mono"}). ! Undefined control sequence. l.3589 \code {\LinkA{embedFonts}{embedFonts}}. The URW-based families descri... ! Undefined control sequence. l.3589 \code{\LinkA {embedFonts}{embedFonts}}. The URW-based families descri... ! Undefined control sequence. l.3590 \code {\LinkA{postscript}{postscript}} can be used with viewers ! Undefined control sequence. l.3590 \code{\LinkA {postscript}{postscript}} can be used with viewers ! Undefined control sequence. l.3592 \code {xpdf} or Ghostscript. ! Undefined control sequence. l.3593 Since \code {\LinkA{embedFonts}{embedFonts}} makes use of Ghostscript,... ! Undefined control sequence. l.3593 Since \code{\LinkA {embedFonts}{embedFonts}} makes use of Ghostscript,... ! Undefined control sequence. l.3596 See \code {\LinkA{postscript}{postscript}} for details of encodings, a... ! Undefined control sequence. l.3596 See \code{\LinkA {postscript}{postscript}} for details of encodings, a... ! Undefined control sequence. l.3598 in file \file {PDFDoc.enc}. ! Undefined control sequence. l.3602 raster images). The \R {} graphics model does not distinguish graphics [486] Underfull \hbox (badness 4660) in paragraph at lines 281--284 []@textrm For the con-ven-tions for files `@texttt NEWS[]@textrm '[] and `@text tt ChangeLog[]@textrm '[] in the @reducedrm GNU @textrm project see [3 ! Undefined control sequence. l.3605 The \code {version} argument declares the version of PDF that gets ! Undefined control sequence. l.3613 Line widths as controlled by \code {par(lwd = )} are in multiples of ! Undefined control sequence. l.3614 ...ultiples less than 1 are allowed. \code {pch = "."} with ! Undefined control sequence. l.3615 \code {cex = 1} corresponds to a square of side 1/72 inch, which is ! Undefined control sequence. l.3617 \code {"cra"}. ! Undefined control sequence. l.3619 The \code {paper} argument sets the \samp{/MediaBox} entry in the file, ! Undefined control sequence. l.3619 The \code{paper} argument sets the \samp {/MediaBox} entry in the file, ! Undefined control sequence. l.3620 which defaults to \code {width} by \code{height}. If it is set to ! Undefined control sequence. l.3620 which defaults to \code{width} by \code {height}. If it is set to ! Undefined control sequence. l.3621 something other than \code {"special"}, a device region of the ! Undefined control sequence. l.3623 paper size: if either \code {width} or \code{height} is less ! Undefined control sequence. l.3623 paper size: if either \code{width} or \code {height} is less ! Undefined control sequence. l.3624 than \code {0.1} or too large to give a total margin of 0.5 inch, it is ! Undefined control sequence. l.3626 want the default behaviour of \code {\LinkA{postscript}{postscript}} use ! Undefined control sequence. l.3626 want the default behaviour of \code{\LinkA {postscript}{postscript}} use ! Undefined control sequence. l.3627 \code {pdf(paper = "a4r", width = 0, height = 0)} to centre the device... ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3635 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3637 \begin{Section} {Color models} ! Undefined control sequence. l.3638 The default color model (\code {"srgb"}) is sRGB. Model \code{"gray"} ! Undefined control sequence. l.3638 ...el (\code{"srgb"}) is sRGB. Model \code {"gray"} ! Undefined control sequence. l.3639 (or \code {"grey"}) maps sRGB colors to greyscale using perceived ! Undefined control sequence. l.3640 luminosity (biased towards green). \code {"cmyk"} outputs in CMYK ! Undefined control sequence. l.3643 (\url {https://en.wikipedia.org/wiki/CMYK_color_model#Mapping_RGB_to_C... ! Missing $ inserted. $ l.3643 (\url{https://en.wikipedia.org/wiki/CMYK_ color_model#Mapping_RGB_to_C... ! You can't use `macro parameter character #' in math mode. l.3643 .../en.wikipedia.org/wiki/CMYK_color_model# Mapping_RGB_to_CMYK}), ! Extra }, or forgotten $. l.3643 ...ki/CMYK_color_model#Mapping_RGB_to_CMYK} ), ! Missing $ inserted. $ l.3645 Underfull \hbox (badness 2359) in paragraph at lines 3630--3645 \OT1/cmr/m/n/10 Model "gray" (or "grey") maps sRGB col-ors to greyscale us-ing per- Underfull \hbox (badness 1755) in paragraph at lines 3630--3645 \OT1/cmr/m/n/10 ceived lu-mi-nos-ity (bi-ased to-wards green). "cmyk" out-puts in CMYK Overfull \hbox (141.27126pt too wide) in paragraph at lines 3630--3645 \OT1/cmr/m/n/10 (https://en.wikipedia.org/wiki/CMYK$[]\OML/cmm/m/it/10 olor[]od elMapping[]GB[]o[]MYK\OT1/cmr/m/n/10 )\OML/cmm/m/it/10 ; andrasterimagesareoutp utinRGB:$ ! Undefined control sequence. l.3646 ...r backwards compatibility is model \code {"rgb"} which ! Undefined control sequence. l.3648 in \R {} prior to 2.13.0. Some viewers may render some plots in that ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3650 \end{Section} ! Missing } inserted. } l.3650 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3652 \begin{Section} {Conventions} ! Undefined control sequence. l.3663 ...of any radius are allowed. Unless \code {useDingbats = ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3674 \end{Section} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3676 \begin{Section} {Printing} ! Undefined control sequence. l.3677 ...is possible to print directly from \code {pdf} by ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3679 \begin{alltt} pdf("|lp -o landscape", paper = "a4r")\end{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3679 ...-o landscape", paper = "a4r")\end{alltt} [487]] [4 ! Undefined control sequence. l.3681 This forces \code {onefile = TRUE}. ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3682 \end{Section} ! LaTeX Error: Environment Note undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3684 \begin{Note} \relax ! Undefined control sequence. l.3686 ...e likely to be in your viewer than in \R {}. Try another ! Undefined control sequence. l.3707 ...ems the default plotting character \code {pch = 1} was ! Undefined control sequence. l.3708 ... some PDF viewers incorrectly as a \code {"q"} ! Undefined control sequence. l.3709 ...se seem to be viewers based on the \samp {poppler} PDF ! Undefined control sequence. l.3712 to \file {\textasciitilde{}/.fonts.conf} or \file{/etc/fonts/local.con... ! Undefined control sequence. l.3712 ...{\textasciitilde{}/.fonts.conf} or \file {/etc/fonts/local.conf} ma... ! LaTeX Error: Environment alltt undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3715 \begin{alltt} ! LaTeX Error: \begin{document} ended by \end{alltt}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3721 \end{alltt} ! Undefined control sequence. l.3725 section of the help for \code {\LinkA{X11}{X11}}. ! Undefined control sequence. l.3725 section of the help for \code{\LinkA {X11}{X11}}. ! Undefined control sequence. l.3727 ... is a different font bug in the \command {pdf.js} viewer included ! Undefined control sequence. l.3729 displays symbols such \code {pch = 1} as lambda. ! LaTeX Error: \begin{document} ended by \end{Note}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3730 \end{Note} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3732 \begin{SeeAlso} \relax ! Undefined control sequence. l.3733 \code {\LinkA{pdfFonts}{pdfFonts}}, \code{\LinkA{pdf.options}{pdf.opti... ! Undefined control sequence. l.3733 \code{\LinkA {pdfFonts}{pdfFonts}}, \code{\LinkA{pdf.options}{pdf.opti... ! Undefined control sequence. l.3733 \code{\LinkA{pdfFonts}{pdfFonts}}, \code {\LinkA{pdf.options}{pdf.opti... ! Undefined control sequence. l.3733 ...LinkA{pdfFonts}{pdfFonts}}, \code{\LinkA {pdf.options}{pdf.options}}, ! Undefined control sequence. l.3734 \code {\LinkA{embedFonts}{embedFonts}}, ! Undefined control sequence. l.3734 \code{\LinkA {embedFonts}{embedFonts}}, ! Undefined control sequence. l.3735 \code {\LinkA{Devices}{Devices}}, ! Undefined control sequence. l.3735 \code{\LinkA {Devices}{Devices}}, ! Undefined control sequence. l.3736 \code {\LinkA{postscript}{postscript}}. ! Undefined control sequence. l.3736 \code{\LinkA {postscript}{postscript}}. ! Undefined control sequence. l.3738 \code {\LinkA{cairo\_pdf}{cairo.Rul.pdf}} and (on macOS only) \code{\L... ! Undefined control sequence. l.3738 \code{\LinkA {cairo\_pdf}{cairo.Rul.pdf}} and (on macOS only) \code{\L... ! Undefined control sequence. l.3738 ...airo.Rul.pdf}} and (on macOS only) \code {\LinkA{quartz}{quartz}} ! Undefined control sequence. l.3738 ...l.pdf}} and (on macOS only) \code{\LinkA {quartz}{quartz}} ! Undefined control sequence. l.3746 \url {https://www.r-project.org/doc/Rnews/Rnews_2006-2.pdf}. ! Missing $ inserted. $ l.3746 ...tps://www.r-project.org/doc/Rnews/Rnews_ 2006-2.pdf}. ! Extra }, or forgotten $. l.3746 ...-project.org/doc/Rnews/Rnews_2006-2.pdf} . ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3747 \end{SeeAlso} ! Missing $ inserted. $ l.3747 \end{SeeAlso} ! Missing } inserted. } l.3747 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3749 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3750 \begin{ExampleCode} Underfull \hbox (badness 10000) in paragraph at lines 3744--3751 []\OT1/cmr/m/n/10 Paul Mur-rell and Brian Rip-ley (2006) Non-standard fonts in Underfull \hbox (badness 1867) in paragraph at lines 3744--3751 \OT1/cmr/m/n/10 PostScript and PDF graph-ics. \OT1/cmr/m/it/10 R News\OT1/cmr/m /n/10 , 6(2):41--47. https://www.r- ! You can't use `macro parameter character #' in vertical mode. l.3752 # # Test function for encodings ! You can't use `macro parameter character #' in vertical mode. l.3752 ## Test function for encodings ! You can't use `macro parameter character #' in horizontal mode. l.3768 # # there will be many warnings. ! You can't use `macro parameter character #' in horizontal mode. l.3768 ## there will be many warnings. ! You can't use `macro parameter character #' in horizontal mode. l.3770 # # this does not view properly in older viewers. ! You can't use `macro parameter character #' in horizontal mode. l.3770 ## this does not view properly in older viewers. ! You can't use `macro parameter character #' in horizontal mode. l.3772 # # works well for viewing in gs-based viewers, and often in xpdf. ! You can't use `macro parameter character #' in horizontal mode. l.3772 ## works well for viewing in gs-based viewers, and often in xpdf. ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3773 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3774 \end{Examples} ! Undefined control sequence. l.3775 \HeaderA {pdf.options}{Auxiliary Function to Set/View Defaults for Arg... ! Undefined control sequence. l.3776 \keyword {device}{pdf.options} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3778 \begin{Description} \relax ! Undefined control sequence. l.3779 The auxiliary function \code {pdf.options} can be used to set or view ! Undefined control sequence. l.3781 arguments to \code {\LinkA{pdf}{pdf}}. ! Undefined control sequence. l.3781 arguments to \code{\LinkA {pdf}{pdf}}. [488]] [5 ! Undefined control sequence. l.3783 \code {pdf.options} needs to be called before calling \code{pdf}, ! Undefined control sequence. l.3783 ... needs to be called before calling \code {pdf}, ! Undefined control sequence. l.3785 arguments to \code {pdf}. ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3787 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3789 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3793 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3795 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3796 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3797 \item[\code{...}] arguments \code{width}, \code{height}, \code{onefile}, ! Undefined control sequence. l.3797 \item[\code{...}] arguments \code {width}, \code{height}, \code{onefile}, ! Undefined control sequence. l.3797 ...code{...}] arguments \code{width}, \code {height}, \code{onefile}, ! Undefined control sequence. l.3797 ...ments \code{width}, \code{height}, \code {onefile}, ! Undefined control sequence. l.3798 \code {family}, \code{title}, \code{fonts}, \code{paper}, ! Undefined control sequence. l.3798 \code{family}, \code {title}, \code{fonts}, \code{paper}, ! Undefined control sequence. l.3798 \code{family}, \code{title}, \code {fonts}, \code{paper}, ! Undefined control sequence. l.3798 ...mily}, \code{title}, \code{fonts}, \code {paper}, ! Undefined control sequence. l.3799 \code {encoding}, \code{pointsize}, \code{bg}, \code{fg}, ! Undefined control sequence. l.3799 \code{encoding}, \code {pointsize}, \code{bg}, \code{fg}, ! Undefined control sequence. l.3799 \code{encoding}, \code{pointsize}, \code {bg}, \code{fg}, ! Undefined control sequence. l.3799 ...ing}, \code{pointsize}, \code{bg}, \code {fg}, ! Undefined control sequence. l.3800 \code {pagecentre}, \code{useDingbats}, \code{colormodel}, ! Undefined control sequence. l.3800 \code{pagecentre}, \code {useDingbats}, \code{colormodel}, ! Undefined control sequence. l.3800 ...e{pagecentre}, \code{useDingbats}, \code {colormodel}, ! Undefined control sequence. l.3801 \code {fillOddEven} and \code{compress} can be supplied. ! Undefined control sequence. l.3801 \code{fillOddEven} and \code {compress} can be supplied. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3802 \item[\code{reset}] logical: should the defaults be reset to their ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3804 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3805 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3807 \begin{Details} \relax ! Undefined control sequence. l.3808 If both \code {reset = TRUE} and \code{...} are supplied the defaults ! Undefined control sequence. l.3808 If both \code{reset = TRUE} and \code {...} are supplied the defaults ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3811 \end{Details} ! LaTeX Error: Environment Value undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3813 \begin{Value} ! LaTeX Error: \begin{document} ended by \end{Value}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3817 \end{Value} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3819 \begin{SeeAlso} \relax ! Undefined control sequence. l.3820 \code {\LinkA{pdf}{pdf}}, \code{\LinkA{ps.options}{ps.options}}. ! Undefined control sequence. l.3820 \code{\LinkA {pdf}{pdf}}, \code{\LinkA{ps.options}{ps.options}}. ! Undefined control sequence. l.3820 \code{\LinkA{pdf}{pdf}}, \code {\LinkA{ps.options}{ps.options}}. ! Undefined control sequence. l.3820 \code{\LinkA{pdf}{pdf}}, \code{\LinkA {ps.options}{ps.options}}. ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3821 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3823 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3824 \begin{ExampleCode} ! You can't use `macro parameter character #' in horizontal mode. l.3827 pdf.options(reset = TRUE) # back to factory-fresh ! LaTeX Error: \begin{document} ended by \end{ExampleCode}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3828 \end{ExampleCode} ! LaTeX Error: \begin{document} ended by \end{Examples}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3829 \end{Examples} ! Undefined control sequence. l.3830 \HeaderA {pictex}{A PicTeX Graphics Driver}{pictex} ! Undefined control sequence. l.3831 \keyword {device}{pictex} ! LaTeX Error: Environment Description undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3833 \begin{Description} \relax ! Undefined control sequence. l.3835 ... It dates from the very early days of \R {} and is ! LaTeX Error: \begin{document} ended by \end{Description}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3837 \end{Description} ! LaTeX Error: Environment Usage undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3839 \begin{Usage} ! LaTeX Error: \begin{document} ended by \end{Usage}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3844 \end{Usage} ! LaTeX Error: Environment Arguments undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3846 \begin{Arguments} ! LaTeX Error: Environment ldescription undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3847 \begin{ldescription} ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3848 \item[\code{file}] the file where output will appear. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3849 \item[\code{width}] The width of the plot in inches. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3850 \item[\c]ode{height}] the height of the plot in inches. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3851 \item[\code{debug}] should debugging information be printed. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3852 \item[\code{bg}] the background color for the plot. Ignored. ! LaTeX Error: Lonely \item--perhaps a missing list environment. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3853 \item[\code{fg}] the foreground color for the plot. Ignored. ! LaTeX Error: \begin{document} ended by \end{ldescription}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3854 \end{ldescription} ! LaTeX Error: \begin{document} ended by \end{Arguments}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3855 \end{Arguments} ! LaTeX Error: Environment Details undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3857 \begin{Details} \relax ! Undefined control sequence. l.3859 included in \R {}. It does not have any font metric information, so the ! Undefined control sequence. l.3860 use of \code {\LinkA{plotmath}{plotmath}} is not supported. ! Undefined control sequence. l.3860 use of \code{\LinkA {plotmath}{plotmath}} is not supported. ! Undefined control sequence. l.3863 \code {pch = "."} corresponds to a square of side 1pt. ! LaTeX Error: \begin{document} ended by \end{Details}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3873 \end{Details} ! LaTeX Error: Environment Section undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3875 \begin{Section} {Conventions} ! Undefined control sequence. l.3882 \item There is no \code {pointsize} argument: the default size is ! Undefined control sequence. l.3884 \item The only font family is \code {cmss10}. [489] Underfull \hbox (badness 10000) in paragraph at lines 494--497 []@textrm The `@texttt Depends[]@textrm '[], `@texttt Imports[]@textrm '[], `@t exttt Suggests[]@textrm '[], `@texttt Enhances[]@textrm '[], `@texttt LinkingTo []@textrm '[] and [6 ! LaTeX Error: \begin{document} ended by \end{Section}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3891 \end{Section} ! LaTeX Error: Environment Author undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3893 \begin{Author} \relax ! LaTeX Error: \begin{document} ended by \end{Author}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3896 \end{Author} ! LaTeX Error: Environment References undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3898 \begin{References} \relax ! LaTeX Error: \begin{document} ended by \end{References}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3910 \end{References} ! LaTeX Error: Environment SeeAlso undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3912 \begin{SeeAlso} \relax ! Undefined control sequence. l.3913 \code {\LinkA{postscript}{postscript}}, \code{\LinkA{pdf}{pdf}}, \code... ! Undefined control sequence. l.3913 \code{\LinkA {postscript}{postscript}}, \code{\LinkA{pdf}{pdf}}, \code... ! Undefined control sequence. l.3913 ...e{\LinkA{postscript}{postscript}}, \code {\LinkA{pdf}{pdf}}, \code{... ! Undefined control sequence. l.3913 ...A{postscript}{postscript}}, \code{\LinkA {pdf}{pdf}}, \code{\LinkA{... ! Undefined control sequence. l.3913 ...script}}, \code{\LinkA{pdf}{pdf}}, \code {\LinkA{Devices}{Devices}}. ! Undefined control sequence. l.3913 ...}, \code{\LinkA{pdf}{pdf}}, \code{\LinkA {Devices}{Devices}}. ! Undefined control sequence. l.3915 The \code {tikzDevice} in the CRAN package of that name for more modern ! Undefined control sequence. l.3916 TeX-based graphics (\url {http://pgf.sourceforge.net/}, although ! Undefined control sequence. l.3917 including PDF figures \emph{via} \command {pdftex} is most common ! LaTeX Error: \begin{document} ended by \end{SeeAlso}. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3919 \end{SeeAlso} ! LaTeX Error: Environment Examples undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3921 \begin{Examples} ! LaTeX Error: Environment ExampleCode undefined. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3922 \begin{ExampleCode} ! Missing $ inserted. $ l.3926 plot(1:11, (-5:5)^ 2, type = "b", main = "Simple Example Plot") ! You can't use `macro parameter character #' in math mode. l.3928 # #-------------------- ! You can't use `macro parameter character #' in math mode. l.3928 ## -------------------- ! You can't use `macro parameter character #' in math mode. l.3929 # # Not run: ! You can't use `macro parameter character #' in math mode. l.3929 ## Not run: ! LaTeX Error: Can be used only in preamble. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3931 \documentclass {article} ! LaTeX Error: Can be used only in preamble. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3932 \usepackage {pictex} ! LaTeX Error: Can be used only in preamble. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3933 \usepackage {graphics} % for \rotatebox ! LaTeX Error: Can be used only in preamble. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3934 \begin{document} ! LaTeX Error: Not in outer par mode. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ... l.3936 \begin{figure}[h] ! Undefined control sequence. \@xfloat ...@fltovf \fi \global \setbox \@currbox \color@vbox \normalcolor \... l.3936 \begin{figure}[h] ! Missing number, treated as zero. \color@vbox l.3936 \begin{figure}[h] ! LaTeX Error: File `Rplots.tex' not found. Type X to quit or to proceed, or enter new name. (Default extension: tex) Enter file name: ! Emergency stop. l.3937 \centerline{\input{Rplots.tex}} ^^M ! ==> Fatal error occurred, no output PDF file produced! Transcript written on fullrefman.log. ]make[2]: *** [Makefile:273: fullrefman.pdf] Error 1 make[2]: *** Waiting for unfinished jobs.... Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm Lit-er-a-ture Clas-si-fi-ca-tion Sys-tem, [][]@texttt https://www.aeawe b.org/econlit/jelCodes.php[][][]@textrm , Underfull \hbox (badness 10000) in paragraph at lines 628--641 @textrm or `@texttt Classification/MSC[]@textrm '[] or `@texttt Classification/ MSC-2010[]@textrm '[] (the Math-e-mat-ics Sub-ject [7] [8] [9] [10] Underfull \hbox (badness 2376) in paragraph at lines 1000--1007 @textrm this is OK if that con-di-tion-ing is done in ex-am-ples/tests/vignette s, al-though us-ing [11] [12] [13]> [14 [35]] [36] [37]] [38] [47 Chapter 9 [39] methods ] grDevices [48 utils graphics [40]] Chapter 10 [41] [49] [42] [50] [43] Overfull \hbox (32.24495pt too wide) in paragraph at lines 4536--4536 []@texttt jv <- .jcall("java/lang/System", "S", "getProperty", "java.runtime.v ersion")[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4538--4538 [] @texttt jvn <- as.numeric(paste0(strsplit(jv, "[.]")[[1L]][1:2], collapse = "."))[] Overfull \hbox (26.49626pt too wide) in paragraph at lines 4539--4539 [] @texttt if(jvn < 1.8) stop("Java 8 is needed for this package but not avai lable")[] [51] [44] [52 [45]] [46 [53] [47]] [54 [48]] [49 Underfull \hbox (badness 3826) in paragraph at lines 4914--4917 []@textrm Some (but not all) ex-ten-sions are listed at [][]@texttt https://gc c.gnu.org/onlinedocs/ Underfull \hbox (badness 10000) in paragraph at lines 4914--4917 @texttt gcc/C-Extensions.html[][][] @textrm and [][]@texttt https://gcc.gnu.or g/onlinedocs/gcc/C_002b_ [55] Chapter 11 [50]] [56 [51]] [52 [57]] [53 [58]] [59] stats [54] [60] [55] base [61] [56] [62 [57] Chapter 2 [63]] [58 [64]] [65 [59]] [60 [66 datasets ]] [67] [61 [68] Chapter 12 [62]] [69] [63] [70] [64] Underfull \hbox (badness 2707) in paragraph at lines 6188--6194 []@textrm Packages may have an over-view help page with an @texttt \alias[] @te xtttsl pkg-name@texttt -package[]@textrm , e.g. Underfull \hbox (badness 3635) in paragraph at lines 6195--6201 []@textrm Skeletons of doc-u-men-ta-tion for a pack-age can be gen-er-ated us-i ng the func-tion [71 [65]] [66 [72]] [67] [73] [68] [74 [69]] [70 Underfull \hbox (badness 10000) in paragraph at lines 6585--6592 []@textrm The two com-monly used sim-ple forms are @texttt \figure{@textttsl fi lename@texttt }[] @textrm and Underfull \hbox (badness 3919) in paragraph at lines 6585--6592 @texttt \figure{@textttsl filename@texttt }{@textttsl alternate text@texttt }[] @textrm . This will in-clude a copy of the fig-ure in [75]] [71 [87]] [88 [72] [73 [102]] [103] Chapter 5 [104 [74]] [75] [105 Underfull \hbox (badness 10000) in paragraph at lines 6412--6415 @textrm and these can be ac-cessed from R via the pack-age [][]@textbf rggobi[] []@textrm , de-scribed at Chapter 13 [76]] [106] [77 [107] Chapter 14 [78]] [108 [79]] [109 Underfull \hbox (badness 10000) in paragraph at lines 6647--6652 []@textrm Windows' UNC filepaths (such as `@texttt \\server\dir1\dir2\file[]@t extrm '[] and Underfull \hbox (badness 5189) in paragraph at lines 6647--6652 @textrm `@texttt \\?\UNC\server\dir1\dir2\file[]@textrm '[]) are not sup-porte d, but they may work in [80]] Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 []@textrm There is some con-fu-sion be-tween @texttt xz[] @textrm and @texttt l zma[] @textrm com-pres-sion (see Underfull \hbox (badness 10000) in paragraph at lines 6724--6728 [][]@texttt https://en.wikipedia.org/wiki/Xz[][][] @textrm and [][]@texttt http s://en.wikipedia.org/wiki/LZMA[][][]@textrm ): Appendix A [81] [110] [82] Underfull \hbox (badness 4505) in paragraph at lines 9525--9530 @textrm Without or with reg-is-tra-tion, these will both work. If @texttt R_ini t_mypkg[] @textrm calls @texttt R_ [111 [83]] Appendix B [84 [112]] Underfull \hbox (badness 2635) in paragraph at lines 7023--7029 @textrm `@texttt --no-site-file[]@textrm '[] was given. The name of this file is taken from the value Underfull \hbox (badness 2158) in paragraph at lines 7023--7029 @textrm of the @texttt R_PROFILE[] @textrm en-vi-ron-ment vari-able. If that v ari-able is un-set, the de-fault [85 [113]] Overfull \hbox (30.03963pt too wide) in paragraph at lines 9771--9771 []@smalltt y[accept] <- .Call("spline_value", knots, coeff, ord, x[accept], de riv, PACKAGE = "splines")[] [114 [86]] [87 [115]] Underfull \hbox (badness 4752) in paragraph at lines 7295--7307 []@textrm In ad-di-tion, you can use op-tions `@texttt --arch=[]@textrm '[], `@ texttt --no-environ[]@textrm '[], `@texttt --no-init-file[]@textrm '[], [88] [116 [89]] [117 [90]] Appendix C [91 [118]] [92] Appendix D [93 Overfull \hbox (61.1125pt too wide) in paragraph at lines 10210--10212 [][][]@smallrm For ex-am-ple, `@smalltt _GLIBCXX_USE_CXX11_ABI[]@smallrm '[] in @smalltt g++[] @smallrm 5.1 and later: [][]@smalltt https://gcc.gnu.org/online docs/libstdc++/manual/using_ [119] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.vrs] Overfull \hbox (16.31242pt too wide) in paragraph at lines 10329--10329 []@texttt PKG_LIBS=-L"$(PKGB_PATH)$(R_ARCH)" -Wl,-rpath,"$(PKGB_PATH)$(R_ARCH) " -lpackB[] [120 [94]] [121] [122 [95] [123]] [124]) [125 Appendix E [96] [126] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-intro.cps] [127] [97 Underfull \hbox (badness 2781) in paragraph at lines 11080--11082 [][][]@smallrm You can as-sign a @smallit copy @smallrm of the ob-ject in the e n-vi-ron-ment frame @smalltt rho[] @smallrm us-ing @smalltt defineVar(symbol, [128]]) Appendix F [98] Underfull \hbox (badness 10000) in paragraph at lines 11162--11164 []@textrm Functions @texttt any_duplicated[] @textrm and @texttt any_duplicated 3[] @textrm are fast ver-sions of R's [129 [99]] ) (see the transcript file for additional information)]]] [134 [135 [136 [137]] [142] Output written on R-intro.pdf (105 pages, 703634 bytes). Transcript written on R-intro.log. Chapter 6 [143] [144] [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] Warning: unbalanced parentheses in @def... [156] [157] [158] Underfull \hbox (badness 2689) in paragraph at lines 13767--13773 []@textrm The vis-i-bil-ity mech-a-nism is not avail-able on Win-dows, but ther e is an equally [159] [160] Underfull \hbox (badness 10000) in paragraph at lines 13895--13901 []@textrm The graph-ics sys-tems are ex-posed in head-ers `@texttt R_ext/Graphi csEngine.h[]@textrm '[], Underfull \hbox (badness 3240) in paragraph at lines 13895--13901 @textrm `@texttt R_ext/GraphicsDevice.h[]@textrm '[] (which it in-cludes) and ` @texttt R_ext/QuartzDevice.h[]@textrm '[]. Fa-cil-i- Chapter 7 [161] [162] Chapter 8 [163] [164] [165] Overfull \hbox (22.06111pt too wide) in paragraph at lines 14306--14306 []@texttt ## replace $(LIBR) $(LIBS) by $(STATIC_LIBR) if R was build with a s tatic libR[] [166] Overfull \hbox (33.55849pt too wide) in paragraph at lines 14354--14354 []@texttt extern int (*ptr_R_EditFiles)(int, const char **, const char **, co nst char *);[] [167] [168] [169] Underfull \hbox (badness 10000) in paragraph at lines 14597--14604 @texttt internet/nanoftp.c[]@textrm '[], `@texttt src/modules/internet/nanohtt p.c[]@textrm '[] and `@texttt src/modules/ [170] Underfull \hbox (badness 10000) in paragraph at lines 14721--14726 []@textrm Another (D)COM server, @texttt RDCOMServer[]@textrm , may be avail-a ble from Omega-hat, [171] [172] Underfull \hbox (badness 6284) in paragraph at lines 14857--14864 @textrm may be avail-able from the Win-dows Reg-istry: it will be in @texttt H KEY_LOCAL_ Underfull \hbox (badness 10000) in paragraph at lines 14857--14864 @texttt MACHINE\Software\R-core\R\InstallPath[] @textrm from an ad-min-is-tra- tive in-stall and Underfull \hbox (badness 3769) in paragraph at lines 14857--14864 @texttt HKEY_CURRENT_USER\Software\R-core\R\InstallPath[] @textrm oth-er-wise, if se-lected dur-ing [173] [174] (Function and variable index) [175] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.vrs [176] [177]) (Concept index) [178] (/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual/R-exts.cps [179]) [180] ) (see the transcript file for additional information) Output written on R-exts.pdf (186 pages, 1082123 bytes). Transcript written on R-exts.log. make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[1]: *** [Makefile:143: pdf] Error 2 make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make: [Makefile:224: pdf] Error 2 (ignored) make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' + exit 0 Executing(%install): env -i TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp /bin/sh -e /tmp/B.Qb_jAP/BUILD/tmp/rpm-tmp.58457 TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp + umask 022 + cd /tmp/B.Qb_jAP/BUILD + /bin/rm '--interactive=never' -rf /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder + /bin/mkdir -p /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder + cd R-3.4.3 + rm -rf /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder + install -d /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/bin /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/man/man1 /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/include /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/applications /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/pixmaps + /usr/bin/make -j8 -C build -j1 install 'DESTDIR=/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder' make: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/m4' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tools' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' installing doc ... mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' installing doc/html ... mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/html make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/html' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' installing doc/manual ... mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/manual mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/manual/images make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc/manual' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/doc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/etc installing etc ... make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/etc' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' installing share ... mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/R mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/dictionaries mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/encodings mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/java mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/licenses mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/make mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/Rd mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/Rd/macros mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/sh mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/texmf mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/texmf/bibtex/bib mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/texmf/bibtex/bst mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/share/texmf/tex/latex make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/share' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/bin make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/scripts' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/include make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/include/R_ext make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include/R_ext' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/include' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/blas' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/blas' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/tre' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/xdr' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/xdr' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/intl' make[3]: Nothing to be done for 'install'. make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra/intl' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/extra' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/appl' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Nothing to be done for 'install'. make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/nmath' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' x86_64-tld-linux-gcc -I. -I../../src/include -I../../.././src/include -DHAVE_CONFIG_H -O2 -fwrapv -pipe -Wformat -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -fstack-protector --param=ssp-buffer-size=4 -fPIC -march=x86-64 -Wl,--as-needed -Wl,--no-copy-dt-needed-entries -Wl,-z,relro -Wl,-z,combreloc -DR_HOME='"/usr/lib64/R"' \ -o Rscript ../../.././src/unix/Rscript.c mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/pkgconfig make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/unix' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/bin/exec make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/lib make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/main' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/modules make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/internet' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/lapack' make[3]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[3]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules/X11' make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/modules' make[2]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' mkdir -p -- /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library installing packages ... building HTML index ... make[2]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src/library' make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/src' make[1]: Entering directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tests' make[1]: Nothing to be done for 'install'. make[1]: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build/tests' make: Leaving directory '/tmp/B.Qb_jAP/BUILD/R-3.4.3/build' + install /tmp/B.Qb_jAP/R.desktop /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/applications + install /tmp/B.Qb_jAP/R.xpm /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/pixmaps + ln -sf /usr/lib64/R/lib/libR.so /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64 + mv /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/include /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/include/R + ln -sf /usr/include/R /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/include + >R.files + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth + module=KernSmooth + echo '%dir /usr/lib64/R/library/KernSmooth' + '[' KernSmooth '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/KernSmooth/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/INDEX + bf=INDEX + echo /usr/lib64/R/library/KernSmooth/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/Meta + bf=Meta + echo /usr/lib64/R/library/KernSmooth/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/KernSmooth/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/R + bf=R + echo /usr/lib64/R/library/KernSmooth/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/help + bf=help + echo /usr/lib64/R/library/KernSmooth/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/html + bf=html + echo /usr/lib64/R/library/KernSmooth/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/libs + bf=libs + echo '%dir /usr/lib64/R/library/KernSmooth/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/KernSmooth/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po + bf=po + echo '%dir /usr/lib64/R/library/KernSmooth/po' + gen_lang /usr/lib64/R/library/KernSmooth/po + dir=/usr/lib64/R/library/KernSmooth/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/KernSmooth/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/KernSmooth/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/KernSmooth/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/KernSmooth/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/KernSmooth/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/KernSmooth/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS + module=MASS + echo '%dir /usr/lib64/R/library/MASS' + '[' MASS '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/CITATION + bf=CITATION + echo /usr/lib64/R/library/MASS/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/MASS/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/INDEX + bf=INDEX + echo /usr/lib64/R/library/MASS/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/Meta + bf=Meta + echo /usr/lib64/R/library/MASS/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/MASS/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/NEWS + bf=NEWS + echo /usr/lib64/R/library/MASS/NEWS + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/R + bf=R + echo /usr/lib64/R/library/MASS/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/data + bf=data + echo /usr/lib64/R/library/MASS/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/help + bf=help + echo /usr/lib64/R/library/MASS/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/html + bf=html + echo /usr/lib64/R/library/MASS/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/libs + bf=libs + echo '%dir /usr/lib64/R/library/MASS/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/MASS/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/po + bf=po + echo '%dir /usr/lib64/R/library/MASS/po' + gen_lang /usr/lib64/R/library/MASS/po + dir=/usr/lib64/R/library/MASS/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/MASS/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/MASS/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/MASS/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/MASS/po/ko + bd=ko + lang=ko + echo 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/INDEX + bf=INDEX + echo /usr/lib64/R/library/Matrix/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/LICENCE + bf=LICENCE + echo /usr/lib64/R/library/Matrix/LICENCE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/Meta + bf=Meta + echo /usr/lib64/R/library/Matrix/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/Matrix/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/NEWS.Rd + bf=NEWS.Rd + echo /usr/lib64/R/library/Matrix/NEWS.Rd + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/R + bf=R + echo /usr/lib64/R/library/Matrix/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/data + bf=data + echo /usr/lib64/R/library/Matrix/data + basename 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/test-tools-1.R + bf=test-tools-1.R + echo /usr/lib64/R/library/Matrix/test-tools-1.R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/test-tools-Matrix.R + bf=test-tools-Matrix.R + echo /usr/lib64/R/library/Matrix/test-tools-Matrix.R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/Matrix/test-tools.R + bf=test-tools.R + echo /usr/lib64/R/library/Matrix/test-tools.R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/base + module=base + echo '%dir /usr/lib64/R/library/base' + '[' base '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/base/CITATION + bf=CITATION + echo /usr/lib64/R/library/base/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/base/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/base/DESCRIPTION + basename 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/CITATION + bf=CITATION + echo /usr/lib64/R/library/boot/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/boot/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/INDEX + bf=INDEX + echo /usr/lib64/R/library/boot/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/Meta + bf=Meta + echo /usr/lib64/R/library/boot/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/boot/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/R + bf=R + echo /usr/lib64/R/library/boot/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/bd.q + bf=bd.q + echo /usr/lib64/R/library/boot/bd.q + basename 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/boot/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/boot/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/boot/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/boot/po/ru + bd=ru + lang=ru + echo '%lang(ru) /usr/lib64/R/library/boot/po/ru' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class + module=class + echo '%dir /usr/lib64/R/library/class' + '[' class '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/CITATION + bf=CITATION + echo /usr/lib64/R/library/class/CITATION + basename 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/html + bf=html + echo /usr/lib64/R/library/class/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/libs + bf=libs + echo '%dir /usr/lib64/R/library/class/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/class/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po + bf=po + echo '%dir /usr/lib64/R/library/class/po' + gen_lang /usr/lib64/R/library/class/po + dir=/usr/lib64/R/library/class/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/class/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/class/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/class/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/class/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/class/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/class/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster + module=cluster + echo '%dir /usr/lib64/R/library/cluster' + '[' cluster '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/CITATION + bf=CITATION + echo /usr/lib64/R/library/cluster/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/cluster/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/INDEX + bf=INDEX + echo /usr/lib64/R/library/cluster/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/Meta + bf=Meta + echo /usr/lib64/R/library/cluster/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/cluster/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/NEWS.Rd + bf=NEWS.Rd + echo /usr/lib64/R/library/cluster/NEWS.Rd + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/R + bf=R + echo /usr/lib64/R/library/cluster/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/data + bf=data + echo /usr/lib64/R/library/cluster/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/help + bf=help + echo /usr/lib64/R/library/cluster/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/html + bf=html + echo /usr/lib64/R/library/cluster/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/libs + bf=libs + echo '%dir /usr/lib64/R/library/cluster/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/cluster/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po + bf=po + echo '%dir /usr/lib64/R/library/cluster/po' + gen_lang /usr/lib64/R/library/cluster/po + dir=/usr/lib64/R/library/cluster/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/cluster/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/cluster/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/cluster/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/cluster/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/cluster/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/cluster/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools + module=codetools + echo '%dir /usr/lib64/R/library/codetools' + '[' codetools '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/codetools/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/INDEX + bf=INDEX + echo /usr/lib64/R/library/codetools/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/Meta + bf=Meta + echo /usr/lib64/R/library/codetools/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/codetools/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/R + bf=R + echo /usr/lib64/R/library/codetools/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/help + bf=help + echo /usr/lib64/R/library/codetools/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/codetools/html + bf=html + echo /usr/lib64/R/library/codetools/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler + module=compiler + echo '%dir /usr/lib64/R/library/compiler' + '[' compiler '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/compiler/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/INDEX + bf=INDEX + echo /usr/lib64/R/library/compiler/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/Meta + bf=Meta + echo /usr/lib64/R/library/compiler/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/compiler/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/R + bf=R + echo /usr/lib64/R/library/compiler/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/help + bf=help + echo /usr/lib64/R/library/compiler/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/compiler/html + bf=html + echo /usr/lib64/R/library/compiler/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets + module=datasets + echo '%dir /usr/lib64/R/library/datasets' + '[' datasets '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/datasets/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/INDEX + bf=INDEX + echo /usr/lib64/R/library/datasets/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/Meta + bf=Meta + echo /usr/lib64/R/library/datasets/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/datasets/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/data + bf=data + echo /usr/lib64/R/library/datasets/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/help + bf=help + echo /usr/lib64/R/library/datasets/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/datasets/html + bf=html + echo /usr/lib64/R/library/datasets/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign + module=foreign + echo '%dir /usr/lib64/R/library/foreign' + '[' foreign '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/COPYRIGHTS + bf=COPYRIGHTS + echo /usr/lib64/R/library/foreign/COPYRIGHTS + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/foreign/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/INDEX + bf=INDEX + echo /usr/lib64/R/library/foreign/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/Meta + bf=Meta + echo /usr/lib64/R/library/foreign/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/foreign/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/R + bf=R + echo /usr/lib64/R/library/foreign/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/files + bf=files + echo /usr/lib64/R/library/foreign/files + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/help + bf=help + echo /usr/lib64/R/library/foreign/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/html + bf=html + echo /usr/lib64/R/library/foreign/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/libs + bf=libs + echo '%dir /usr/lib64/R/library/foreign/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/foreign/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/po + bf=po + echo '%dir /usr/lib64/R/library/foreign/po' + gen_lang /usr/lib64/R/library/foreign/po + dir=/usr/lib64/R/library/foreign/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/foreign/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/foreign/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/foreign/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/foreign/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/foreign/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices + module=grDevices + echo '%dir /usr/lib64/R/library/grDevices' + '[' grDevices '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/grDevices/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/INDEX + bf=INDEX + echo /usr/lib64/R/library/grDevices/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/Meta + bf=Meta + echo /usr/lib64/R/library/grDevices/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/grDevices/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/R + bf=R + echo /usr/lib64/R/library/grDevices/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/afm + bf=afm + echo /usr/lib64/R/library/grDevices/afm + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/demo + bf=demo + echo /usr/lib64/R/library/grDevices/demo + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/enc + bf=enc + echo /usr/lib64/R/library/grDevices/enc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/help + bf=help + echo /usr/lib64/R/library/grDevices/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/html + bf=html + echo /usr/lib64/R/library/grDevices/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/icc + bf=icc + echo /usr/lib64/R/library/grDevices/icc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grDevices/libs + bf=libs + echo '%dir /usr/lib64/R/library/grDevices/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/grDevices/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics + module=graphics + echo '%dir /usr/lib64/R/library/graphics' + '[' graphics '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/graphics/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/INDEX + bf=INDEX + echo /usr/lib64/R/library/graphics/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/Meta + bf=Meta + echo /usr/lib64/R/library/graphics/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/graphics/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/R + bf=R + echo /usr/lib64/R/library/graphics/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/demo + bf=demo + echo /usr/lib64/R/library/graphics/demo + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/help + bf=help + echo /usr/lib64/R/library/graphics/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/html + bf=html + echo /usr/lib64/R/library/graphics/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/graphics/libs + bf=libs + echo '%dir /usr/lib64/R/library/graphics/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/graphics/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid + module=grid + echo '%dir /usr/lib64/R/library/grid' + '[' grid '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/grid/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/INDEX + bf=INDEX + echo /usr/lib64/R/library/grid/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/Meta + bf=Meta + echo /usr/lib64/R/library/grid/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/grid/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/R + bf=R + echo /usr/lib64/R/library/grid/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/doc + bf=doc + echo /usr/lib64/R/library/grid/doc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/help + bf=help + echo /usr/lib64/R/library/grid/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/html + bf=html + echo /usr/lib64/R/library/grid/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/grid/libs + bf=libs + echo '%dir /usr/lib64/R/library/grid/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/grid/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice + module=lattice + echo '%dir 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/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/R + bf=R + echo /usr/lib64/R/library/lattice/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/data + bf=data + echo /usr/lib64/R/library/lattice/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/demo + bf=demo + echo /usr/lib64/R/library/lattice/demo + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/help + bf=help + echo /usr/lib64/R/library/lattice/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/html + bf=html + echo /usr/lib64/R/library/lattice/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/libs + bf=libs + echo '%dir /usr/lib64/R/library/lattice/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/lattice/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po + bf=po + echo '%dir /usr/lib64/R/library/lattice/po' + gen_lang /usr/lib64/R/library/lattice/po + dir=/usr/lib64/R/library/lattice/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/lattice/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/lattice/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/lattice/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/lattice/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/lattice/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/lattice/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods + module=methods + echo '%dir /usr/lib64/R/library/methods' + '[' methods '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/methods/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/INDEX + bf=INDEX + echo /usr/lib64/R/library/methods/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/Meta + bf=Meta + echo /usr/lib64/R/library/methods/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/methods/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/R + bf=R + echo /usr/lib64/R/library/methods/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/help + bf=help + echo /usr/lib64/R/library/methods/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/html + bf=html + echo /usr/lib64/R/library/methods/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/methods/libs + bf=libs + echo '%dir /usr/lib64/R/library/methods/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/methods/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv + module=mgcv + echo '%dir /usr/lib64/R/library/mgcv' + '[' mgcv '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/CITATION + bf=CITATION + echo /usr/lib64/R/library/mgcv/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/mgcv/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/INDEX + bf=INDEX + echo /usr/lib64/R/library/mgcv/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/Meta + bf=Meta + echo /usr/lib64/R/library/mgcv/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/mgcv/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/R + bf=R + echo /usr/lib64/R/library/mgcv/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/data + bf=data + echo /usr/lib64/R/library/mgcv/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/help + bf=help + echo /usr/lib64/R/library/mgcv/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/html + bf=html + echo /usr/lib64/R/library/mgcv/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/libs + bf=libs + echo '%dir /usr/lib64/R/library/mgcv/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/mgcv/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po + bf=po + echo '%dir /usr/lib64/R/library/mgcv/po' + gen_lang /usr/lib64/R/library/mgcv/po + dir=/usr/lib64/R/library/mgcv/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/mgcv/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/mgcv/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/mgcv/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/mgcv/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/mgcv/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/mgcv/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme + module=nlme + echo '%dir /usr/lib64/R/library/nlme' + '[' nlme '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/CITATION + bf=CITATION + echo /usr/lib64/R/library/nlme/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/nlme/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/INDEX + bf=INDEX + echo /usr/lib64/R/library/nlme/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/LICENCE + bf=LICENCE + echo /usr/lib64/R/library/nlme/LICENCE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/Meta + bf=Meta + echo /usr/lib64/R/library/nlme/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/nlme/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/R + bf=R + echo /usr/lib64/R/library/nlme/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/data + bf=data + echo /usr/lib64/R/library/nlme/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/help + bf=help + echo /usr/lib64/R/library/nlme/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/html + bf=html + echo /usr/lib64/R/library/nlme/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/libs + bf=libs + echo '%dir /usr/lib64/R/library/nlme/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/nlme/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/mlbook + bf=mlbook + echo /usr/lib64/R/library/nlme/mlbook + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po + bf=po + echo '%dir /usr/lib64/R/library/nlme/po' + gen_lang /usr/lib64/R/library/nlme/po + dir=/usr/lib64/R/library/nlme/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/nlme/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/nlme/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/nlme/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/nlme/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/nlme/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nlme/scripts + bf=scripts + echo /usr/lib64/R/library/nlme/scripts + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet + module=nnet + echo '%dir /usr/lib64/R/library/nnet' + '[' nnet '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/CITATION + bf=CITATION + echo /usr/lib64/R/library/nnet/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/nnet/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/INDEX + bf=INDEX + echo /usr/lib64/R/library/nnet/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/Meta + bf=Meta + echo /usr/lib64/R/library/nnet/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/nnet/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/NEWS + bf=NEWS + echo /usr/lib64/R/library/nnet/NEWS + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/R + bf=R + echo /usr/lib64/R/library/nnet/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/help + bf=help + echo /usr/lib64/R/library/nnet/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/html + bf=html + echo /usr/lib64/R/library/nnet/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/libs + bf=libs + echo '%dir /usr/lib64/R/library/nnet/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/nnet/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po + bf=po + echo '%dir /usr/lib64/R/library/nnet/po' + gen_lang /usr/lib64/R/library/nnet/po + dir=/usr/lib64/R/library/nnet/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/nnet/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/nnet/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/nnet/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/nnet/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/nnet/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/nnet/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel + module=parallel + echo '%dir /usr/lib64/R/library/parallel' + '[' parallel '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/parallel/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/INDEX + bf=INDEX + echo /usr/lib64/R/library/parallel/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/Meta + bf=Meta + echo /usr/lib64/R/library/parallel/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/parallel/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/R + bf=R + echo /usr/lib64/R/library/parallel/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/doc + bf=doc + echo /usr/lib64/R/library/parallel/doc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/help + bf=help + echo /usr/lib64/R/library/parallel/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/html + bf=html + echo /usr/lib64/R/library/parallel/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/parallel/libs + bf=libs + echo '%dir /usr/lib64/R/library/parallel/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/parallel/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart + module=rpart + echo '%dir /usr/lib64/R/library/rpart' + '[' rpart '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/rpart/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/INDEX + bf=INDEX + echo /usr/lib64/R/library/rpart/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/Meta + bf=Meta + echo /usr/lib64/R/library/rpart/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/rpart/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/NEWS.Rd + bf=NEWS.Rd + echo /usr/lib64/R/library/rpart/NEWS.Rd + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/R + bf=R + echo /usr/lib64/R/library/rpart/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/data + bf=data + echo /usr/lib64/R/library/rpart/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/doc + bf=doc + echo /usr/lib64/R/library/rpart/doc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/help + bf=help + echo /usr/lib64/R/library/rpart/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/html + bf=html + echo /usr/lib64/R/library/rpart/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/libs + bf=libs + echo '%dir /usr/lib64/R/library/rpart/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/rpart/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po + bf=po + echo '%dir /usr/lib64/R/library/rpart/po' + gen_lang /usr/lib64/R/library/rpart/po + dir=/usr/lib64/R/library/rpart/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/rpart/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/rpart/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/rpart/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/rpart/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/rpart/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/rpart/po/ru + bd=ru + lang=ru + echo '%lang(ru) /usr/lib64/R/library/rpart/po/ru' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial + module=spatial + echo '%dir /usr/lib64/R/library/spatial' + '[' spatial '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/CITATION + bf=CITATION + echo /usr/lib64/R/library/spatial/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/spatial/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/INDEX + bf=INDEX + echo /usr/lib64/R/library/spatial/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/Meta + bf=Meta + echo /usr/lib64/R/library/spatial/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/spatial/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/NEWS + bf=NEWS + echo /usr/lib64/R/library/spatial/NEWS + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/PP.files + bf=PP.files + echo /usr/lib64/R/library/spatial/PP.files + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/R + bf=R + echo /usr/lib64/R/library/spatial/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/help + bf=help + echo /usr/lib64/R/library/spatial/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/html + bf=html + echo /usr/lib64/R/library/spatial/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/libs + bf=libs + echo '%dir /usr/lib64/R/library/spatial/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/spatial/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po + bf=po + echo '%dir /usr/lib64/R/library/spatial/po' + gen_lang /usr/lib64/R/library/spatial/po + dir=/usr/lib64/R/library/spatial/po + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po/de + bd=de + lang=de + echo '%lang(de) /usr/lib64/R/library/spatial/po/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po/en@quot + bd=en@quot + lang=en + echo '%lang(en) /usr/lib64/R/library/spatial/po/en@quot' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po/fr + bd=fr + lang=fr + echo '%lang(fr) /usr/lib64/R/library/spatial/po/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po/ko + bd=ko + lang=ko + echo '%lang(ko) /usr/lib64/R/library/spatial/po/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/po/pl + bd=pl + lang=pl + echo '%lang(pl) /usr/lib64/R/library/spatial/po/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/spatial/ppdata + bf=ppdata + echo /usr/lib64/R/library/spatial/ppdata + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines + module=splines + echo '%dir /usr/lib64/R/library/splines' + '[' splines '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/splines/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/INDEX + bf=INDEX + echo /usr/lib64/R/library/splines/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/Meta + bf=Meta + echo /usr/lib64/R/library/splines/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/splines/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/R + bf=R + echo /usr/lib64/R/library/splines/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/help + bf=help + echo /usr/lib64/R/library/splines/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/html + bf=html + echo /usr/lib64/R/library/splines/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/splines/libs + bf=libs + echo '%dir /usr/lib64/R/library/splines/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/splines/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats + module=stats + echo '%dir /usr/lib64/R/library/stats' + '[' stats '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/COPYRIGHTS.modreg + bf=COPYRIGHTS.modreg + echo /usr/lib64/R/library/stats/COPYRIGHTS.modreg + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/stats/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/INDEX + bf=INDEX + echo /usr/lib64/R/library/stats/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/Meta + bf=Meta + echo /usr/lib64/R/library/stats/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/stats/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/R + bf=R + echo /usr/lib64/R/library/stats/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/SOURCES.ts + bf=SOURCES.ts + echo /usr/lib64/R/library/stats/SOURCES.ts + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/demo + bf=demo + echo /usr/lib64/R/library/stats/demo + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/help + bf=help + echo /usr/lib64/R/library/stats/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/html + bf=html + echo /usr/lib64/R/library/stats/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats/libs + bf=libs + echo '%dir /usr/lib64/R/library/stats/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/stats/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4 + module=stats4 + echo '%dir /usr/lib64/R/library/stats4' + '[' stats4 '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/stats4/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/INDEX + bf=INDEX + echo /usr/lib64/R/library/stats4/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/Meta + bf=Meta + echo /usr/lib64/R/library/stats4/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/stats4/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/R + bf=R + echo /usr/lib64/R/library/stats4/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/help + bf=help + echo /usr/lib64/R/library/stats4/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/stats4/html + bf=html + echo /usr/lib64/R/library/stats4/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival + module=survival + echo '%dir /usr/lib64/R/library/survival' + '[' survival '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/CITATION + bf=CITATION + echo /usr/lib64/R/library/survival/CITATION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/COPYRIGHTS + bf=COPYRIGHTS + echo /usr/lib64/R/library/survival/COPYRIGHTS + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/survival/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/INDEX + bf=INDEX + echo /usr/lib64/R/library/survival/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/Meta + bf=Meta + echo /usr/lib64/R/library/survival/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/survival/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/NEWS.Rd + bf=NEWS.Rd + echo /usr/lib64/R/library/survival/NEWS.Rd + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/R + bf=R + echo /usr/lib64/R/library/survival/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/data + bf=data + echo /usr/lib64/R/library/survival/data + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/doc + bf=doc + echo /usr/lib64/R/library/survival/doc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/help + bf=help + echo /usr/lib64/R/library/survival/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/html + bf=html + echo /usr/lib64/R/library/survival/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/survival/libs + bf=libs + echo '%dir /usr/lib64/R/library/survival/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/survival/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk + module=tcltk + echo '%dir /usr/lib64/R/library/tcltk' + '[' tcltk '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/tcltk/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/INDEX + bf=INDEX + echo /usr/lib64/R/library/tcltk/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/Meta + bf=Meta + echo /usr/lib64/R/library/tcltk/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/tcltk/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/R + bf=R + echo /usr/lib64/R/library/tcltk/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/demo + bf=demo + echo /usr/lib64/R/library/tcltk/demo + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/exec + bf=exec + echo /usr/lib64/R/library/tcltk/exec + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/help + bf=help + echo /usr/lib64/R/library/tcltk/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/html + bf=html + echo /usr/lib64/R/library/tcltk/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tcltk/libs + bf=libs + echo '%dir /usr/lib64/R/library/tcltk/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/tcltk/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools + module=tools + echo '%dir /usr/lib64/R/library/tools' + '[' tools '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/tools/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/INDEX + bf=INDEX + echo /usr/lib64/R/library/tools/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/Meta + bf=Meta + echo /usr/lib64/R/library/tools/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/tools/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/R + bf=R + echo /usr/lib64/R/library/tools/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/help + bf=help + echo /usr/lib64/R/library/tools/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/html + bf=html + echo /usr/lib64/R/library/tools/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/tools/libs + bf=libs + echo '%dir /usr/lib64/R/library/tools/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/tools/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations + module=translations + echo '%dir /usr/lib64/R/library/translations' + '[' translations '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/translations/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/da + bf=da + echo '%lang(da) /usr/lib64/R/library/translations/da' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/de + bf=de + echo '%lang(de) /usr/lib64/R/library/translations/de' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/en + bf=en + echo /usr/lib64/R/library/translations/en + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/en@quot + bf=en@quot + echo /usr/lib64/R/library/translations/en@quot + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/en_GB + bf=en_GB + echo '%lang(en_GB) /usr/lib64/R/library/translations/en_GB' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/es + bf=es + echo '%lang(es) /usr/lib64/R/library/translations/es' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/fa + bf=fa + echo '%lang(fa) /usr/lib64/R/library/translations/fa' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/fr + bf=fr + echo '%lang(fr) /usr/lib64/R/library/translations/fr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/it + bf=it + echo '%lang(it) /usr/lib64/R/library/translations/it' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/ja + bf=ja + echo '%lang(ja) /usr/lib64/R/library/translations/ja' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/ko + bf=ko + echo '%lang(ko) /usr/lib64/R/library/translations/ko' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/nn + bf=nn + echo '%lang(nn) /usr/lib64/R/library/translations/nn' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/pl + bf=pl + echo '%lang(pl) /usr/lib64/R/library/translations/pl' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/pt_BR + bf=pt_BR + echo '%lang(pt_BR) /usr/lib64/R/library/translations/pt_BR' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/ru + bf=ru + echo '%lang(ru) /usr/lib64/R/library/translations/ru' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/tr + bf=tr + echo '%lang(tr) /usr/lib64/R/library/translations/tr' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/zh_CN + bf=zh_CN + echo '%lang(zh_CN) /usr/lib64/R/library/translations/zh_CN' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/translations/zh_TW + bf=zh_TW + echo '%lang(zh_TW) /usr/lib64/R/library/translations/zh_TW' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils + module=utils + echo '%dir /usr/lib64/R/library/utils' + '[' utils '=' translations ']' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/DESCRIPTION + bf=DESCRIPTION + echo /usr/lib64/R/library/utils/DESCRIPTION + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/INDEX + bf=INDEX + echo /usr/lib64/R/library/utils/INDEX + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/Meta + bf=Meta + echo /usr/lib64/R/library/utils/Meta + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/NAMESPACE + bf=NAMESPACE + echo /usr/lib64/R/library/utils/NAMESPACE + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/R + bf=R + echo /usr/lib64/R/library/utils/R + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/Sweave + bf=Sweave + echo /usr/lib64/R/library/utils/Sweave + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/doc + bf=doc + echo /usr/lib64/R/library/utils/doc + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/help + bf=help + echo /usr/lib64/R/library/utils/help + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/html + bf=html + echo /usr/lib64/R/library/utils/html + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/iconvlist + bf=iconvlist + echo /usr/lib64/R/library/utils/iconvlist + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/libs + bf=libs + echo '%dir /usr/lib64/R/library/utils/libs' + echo '%attr(755,root,root) /usr/lib64/R/library/utils/libs/*.so' + basename /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/library/utils/misc + bf=misc + echo /usr/lib64/R/library/utils/misc + /bin/rm '--interactive=never' /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/COPYING + /bin/rm '--interactive=never' /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/AUTHORS /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/COPYRIGHTS /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/FAQ /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/NEWS.rds /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/THANKS + /bin/rm '--interactive=never' /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/lib64/R/doc/NEWS.pdf + __spec_install_post_strip + set +x Stripping 3 ELF executables...DONE Stripping 29 ELF shared libraries...DONE + __spec_install_post_chrpath + set +x Remove RPATH/RUNPATH from 32 executable binaries and shared object files. + __spec_install_post_check_so + set +x Searching for shared objects with unresolved symbols... DONE + __spec_install_post_check_tmpfiles + set +x Checking /var/run <-> tmpfiles.d completeness... DONE + __spec_install_post_compress_docs + set +x Compress man pages: /usr/share/man + __spec_install_post_compress_modules + set +x + __spec_install_post_py_hardlink + set +x Processing files: R-3.4.3-1 Executing(%doc): env -i TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp /bin/sh -e /tmp/B.Qb_jAP/BUILD/tmp/rpm-tmp.77552 + umask 022 + cd /tmp/B.Qb_jAP/BUILD + cd R-3.4.3 + DOCDIR=/tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3 + export DOCDIR + rm -rf /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3 + /bin/mkdir -p /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3 + /usr/lib/rpm/compress-doc Compressing documentation in /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3... Documentation compressed. + cp -pr README doc/AUTHORS doc/COPYRIGHTS doc/FAQ doc/NEWS doc/NEWS.0 doc/NEWS.1 doc/NEWS.2 doc/RESOURCES doc/THANKS /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3 + /usr/lib/rpm/compress-doc Compressing documentation in /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder/usr/share/doc/R-3.4.3... ./COPYRIGHTS ./NEWS.2 ./NEWS.1 ./FAQ ./README ./NEWS.0 ./RESOURCES ./AUTHORS ./NEWS ./THANKS Documentation compressed. + exit 0 Provides: KernSmooth.so()(64bit) MASS.so()(64bit) Matrix.so()(64bit) R_X11.so()(64bit) R_de.so()(64bit) cairo.so()(64bit) class.so()(64bit) cluster.so()(64bit) foreign.so()(64bit) grDevices.so()(64bit) graphics.so()(64bit) grid.so()(64bit) internet.so()(64bit) lapack.so()(64bit) lattice.so()(64bit) libR.so()(64bit) methods.so()(64bit) mgcv.so()(64bit) nlme.so()(64bit) nnet.so()(64bit) parallel.so()(64bit) pkgconfig(libR) = 3.4.3 rpart.so()(64bit) spatial.so()(64bit) splines.so()(64bit) stats.so()(64bit) survival.so()(64bit) tcltk.so()(64bit) tools.so()(64bit) utils.so()(64bit) Requires(interp): /sbin/ldconfig /sbin/ldconfig Requires(rpmlib): rpmlib(VersionedDependencies) <= 3.0.3-1 Requires(post): /sbin/ldconfig perl-base textutils Requires(postun): /sbin/ldconfig Requires: /bin/sh ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.2.5)(64bit) libR.so()(64bit) libX11.so.6()(64bit) libXmu.so.6()(64bit) libXt.so.6()(64bit) libblas.so.3()(64bit) libbz2.so.1()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.11)(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.15)(64bit) libc.so.6(GLIBC_2.16)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.27)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.6)(64bit) libc.so.6(GLIBC_2.7)(64bit) libc.so.6(GLIBC_2.8)(64bit) libcairo.so.2()(64bit) libcurl.so.4()(64bit) libdl.so.2()(64bit) libdl.so.2(GLIBC_2.2.5)(64bit) libgobject-2.0.so.0()(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libicui18n.so.59()(64bit) libicuuc.so.59()(64bit) libjpeg.so.8()(64bit) libjpeg.so.8(LIBJPEG_8.0)(64bit) liblapack.so.3()(64bit) liblzma.so.5()(64bit) liblzma.so.5(XZ_5.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libpango-1.0.so.0()(64bit) libpangocairo-1.0.so.0()(64bit) libpcre.so.1()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libpthread.so.0()(64bit) libpthread.so.0(GLIBC_2.2.5)(64bit) libreadline.so.7()(64bit) librt.so.1()(64bit) librt.so.1(GLIBC_2.2.5)(64bit) libtcl8.6.so.0()(64bit) libtiff.so.5()(64bit) libtk8.6.so.0()(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Obsoletes: R-base R-contrib R-recommended Processing files: R-java-tools-3.4.3-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder warning: Installed (but unpackaged) file(s) found: /usr/lib64/R/doc/html/Rlogo.pdf /usr/lib64/R/doc/html/Rlogo.svg Wrote: /tmp/B.Qb_jAP/RPMS/R-3.4.3-1.x86_64.rpm Wrote: /tmp/B.Qb_jAP/RPMS/R-java-tools-3.4.3-1.x86_64.rpm Executing(%clean): env -i TMP=/home/users/builder/tmp HOME=/home/users/builder PATH=/usr/local/bin:/usr/bin:/bin:/usr/X11R6/bin:/home/users/builder/bin TMPDIR=/tmp/B.Qb_jAP/BUILD/tmp /bin/sh -e /tmp/B.Qb_jAP/BUILD/tmp/rpm-tmp.40432 + umask 022 + cd /tmp/B.Qb_jAP/BUILD + cd R-3.4.3 + /bin/rm '--interactive=never' -rf /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder + rm -rf /tmp/B.Qb_jAP/BUILD/tmp/R-3.4.3-root-builder ended at: Mon Apr 9 11:49:15 2018, done in 0:08:01.400572 mesg: ttyname failed: Inappropriate ioctl for device + chmod -R u+rwX /tmp/B.Qb_jAP/BUILD + rm -rf /tmp/B.Qb_jAP/tmp /tmp/B.Qb_jAP/BUILD copy rpm files to cache_dir: /spools/ready Creating pndir index of /spools/ready/ (type=dir)... Loading [pndir]previous /spools/ready/packages.ndir.gz... Loading [dir]/spools/ready/... 200..400..439 Writing /spools/ready/packages.ndir.gz... Begin-TLD-Builder-Info upgrading packages End-TLD-Builder-Info mesg: ttyname failed: Inappropriate ioctl for device + rm -rf /tmp/B.Qb_jAP Begin-TLD-Builder-Info Build-Time: user:527.78s sys:23.01s real:490.24s (faults io:0 non-io:12028407) Files queued for ftp: 9118 R-java-tools-3.4.3-1.x86_64.rpm 39355900 R-3.4.3-1.x86_64.rpm 106 R-3.4.3-1.src.rpm.uploadinfo warning: Installed (but unpackaged) file(s) found: /usr/lib64/R/doc/html/Rlogo.pdf /usr/lib64/R/doc/html/Rlogo.svg End-TLD-Builder-Info